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Donald F. Hunt - Publications

Affiliations: 
Chemistry University of Virginia, Charlottesville, VA 
Area:
Analytical Biochemistry
Website:
http://chem.virginia.edu/faculty-research/faculty/donald-f-hunt/

255 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Ma J, Wang W, Li Z, Shabanowitz J, Hunt DF, Hart GW. O-GlcNAc Site Mapping by Using a Combination of Chemoenzymatic Labeling, Copper-Free Click Chemistry, Reductive Cleavage, and Electron-Transfer Dissociation Mass Spectrometry. Analytical Chemistry. PMID 30657688 DOI: 10.1021/acs.analchem.8b05688  0.84
2018 Simon DN, Wriston A, Fan Q, Shabanowitz J, Florwick A, Dharmaraj T, Peterson SB, Gruenbaum Y, Carlson CR, Grønning-Wang LM, Hunt DF, Wilson KL. OGT (-GlcNAc Transferase) Selectively Modifies Multiple Residues Unique to Lamin A. Cells. 7. PMID 29772801 DOI: 10.3390/cells7050044  0.84
2017 Martínez-Turiño S, Pérez JJ, Hervás M, Navajas R, Ciordia S, Udeshi ND, Shabanowitz J, Hunt DF, García JA. Phosphorylation coexists with O-GlcNAcylation in a plant virus protein and influences viral infection. Molecular Plant Pathology. PMID 29024291 DOI: 10.1111/mpp.12626  0.84
2017 Mohammed F, Stones DH, Zarling AL, Willcox CR, Shabanowitz J, Cummings KL, Hunt DF, Cobbold M, Engelhard VH, Willcox BE. The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status. Oncotarget. 8: 54160-54172. PMID 28903331 DOI: 10.18632/oncotarget.16952  0.84
2017 Pavlos R, McKinnon EJ, Ostrov DA, Peters B, Buus S, Koelle D, Chopra A, Schutte R, Rive C, Redwood A, Restrepo S, Bracey A, Kaever T, Myers P, Speers E, ... ... Hunt DF, et al. Shared peptide binding of HLA Class I and II alleles associate with cutaneous nevirapine hypersensitivity and identify novel risk alleles. Scientific Reports. 7: 8653. PMID 28819312 DOI: 10.1038/s41598-017-08876-0  0.84
2017 Weisbrod CR, Kaiser NK, Syka JEP, Early L, Mullen C, Dunyach JJ, English AM, Anderson LC, Blakney GT, Shabanowitz J, Hendrickson CL, Marshall AG, Hunt DF. Front-End Electron Transfer Dissociation Coupled to a 21 Tesla FT-ICR Mass Spectrometer for Intact Protein Sequence Analysis. Journal of the American Society For Mass Spectrometry. PMID 28721671 DOI: 10.1007/s13361-017-1702-3  0.84
2017 Mohammed F, Stones DH, Zarling AL, Willcox CR, Shabanowitz J, Cummings KL, Hunt DF, Cobbold M, Engelhard VH, Willcox BE. The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status. Oncotarget. PMID 28446731 DOI: 10.18632/oncotarget.16952  0.84
2017 Sim MJ, Malaker SA, Khan A, Stowell JM, Shabanowitz J, Peterson ME, Rajagopalan S, Hunt DF, Altmann DM, Long EO, Boyton RJ. Canonical and Cross-reactive Binding of NK Cell Inhibitory Receptors to HLA-C Allotypes Is Dictated by Peptides Bound to HLA-C. Frontiers in Immunology. 8: 193. PMID 28352266 DOI: 10.3389/fimmu.2017.00193  0.84
2017 Bergmann T, Lindvall M, Moore E, Moore E, Sidney J, Miller D, Tallmadge RL, Myers PT, Malaker SA, Shabanowitz J, Osterrieder N, Peters B, Hunt DF, Antczak DF, Sette A. Peptide-binding motifs of two common equine class I MHC molecules in Thoroughbred horses. Immunogenetics. PMID 28315936 DOI: 10.1007/s00251-017-0978-6  0.84
2017 Malaker SA, Penny SA, Steadman LG, Myers PT, Loke J, Raghavan M, Bai DL, Shabanowitz J, Hunt D, Cobbold M. Identification of glycopeptides as post-translationally modified neoantigens in leukemia. Cancer Immunology Research. PMID 28314751 DOI: 10.1158/2326-6066.CIR-16-0280  0.84
2017 Zentella R, Sui N, Barnhill B, Hsieh WP, Hu J, Shabanowitz J, Boyce M, Olszewski NE, Zhou P, Hunt DF, Sun TP. The Arabidopsis O-fucosyltransferase SPINDLY activates nuclear growth repressor DELLA. Nature Chemical Biology. 13: 479-485. PMID 28244988 DOI: 10.1038/nchembio.2320  0.84
2016 Stankovic A, Guo LY, Mata JF, Bodor DL, Cao XJ, Bailey AO, Shabanowitz J, Hunt DF, Garcia BA, Black BE, Jansen LE. A Dual Inhibitory Mechanism Sufficient to Maintain Cell-Cycle-Restricted CENP-A Assembly. Molecular Cell. PMID 28017591 DOI: 10.1016/j.molcel.2016.11.021  0.84
2016 Malaker SA, Ferracane MJ, Depontieu FR, Zarling AL, Shabanowitz J, Bai DL, Topalian SL, Engelhard VH, Hunt DF. Identification and Characterization of Complex Glycosylated Peptides Presented by the MHC Class II Processing Pathway in Melanoma. Journal of Proteome Research. PMID 27550523 DOI: 10.1021/acs.jproteome.6b00496  0.84
2016 Anderson LC, Karch KR, Ugrin SA, Coradin M, English AM, Sidoli S, Shabanowitz J, Garcia BA, Hunt DF. Analyses of Histone Proteoforms Using Front-End Electron Transfer Dissociation-Enabled Orbitrap Instruments. Molecular & Cellular Proteomics : McP. PMID 26785730 DOI: 10.1074/mcp.O115.053843  0.84
2016 Zentella R, Hu J, Hsieh WP, Matsumoto PA, Dawdy A, Barnhill B, Oldenhof H, Hartweck LM, Maitra S, Thomas SG, Cockrell S, Boyce M, Shabanowitz J, Hunt DF, Olszewski NE, et al. O-GlcNAcylation of master growth repressor DELLA by SECRET AGENT modulates multiple signaling pathways in Arabidopsis. Genes & Development. 30: 164-76. PMID 26773002 DOI: 10.1101/gad.270587.115  0.84
2016 Sidney J, Schloss J, Moore C, Lindvall M, Wriston A, Hunt DF, Shabanowitz J, DiLorenzo TP, Sette A. Characterization of the peptide binding specificity of the HLA class I alleles B*38:01 and B*39:06. Immunogenetics. PMID 26754738 DOI: 10.1007/s00251-015-0898-2  0.84
2015 Bailey AO, Panchenko T, Shabanowitz J, Lehman SM, Bai DL, Hunt DF, Black BE, Foltz DR. Identification of the posttranslational modifications present in centromeric chromatin. Molecular & Cellular Proteomics : McP. PMID 26685127 DOI: 10.1074/mcp.M115.053710  0.84
2015 Zhang L, English AM, Bai DL, Ugrin SA, Shabanowitz J, Ross MM, Hunt DF, Wang WH. Analysis of Monoclonal Antibody Sequence and Post-translational Modifications by Time-controlled Proteolysis and Tandem Mass Spectrometry. Molecular & Cellular Proteomics : McP. PMID 26621848 DOI: 10.1074/mcp.O115.056721  0.84
2015 Bhattacharjee S, Liu W, Wang WH, Weitzhandler I, Li X, Qi Y, Liu J, Pang Y, Hunt DF, Chilkoti A. Site-Specific Zwitterionic Polymer Conjugates of a Protein Have Long Plasma Circulation. Chembiochem : a European Journal of Chemical Biology. PMID 26481301 DOI: 10.1002/cbic.201500439  0.32
2015 Pang Y, Wang W, Reid GE, Hunt DF, Bruening ML. Pepsin-Containing Membranes for Controlled Monoclonal Antibody Digestion Prior to Mass Spectrometry Analysis. Analytical Chemistry. PMID 26455365 DOI: 10.1021/acs.analchem.5b02739  0.84
2015 Bergmann T, Moore C, Sidney J, Miller D, Tallmadge R, Harman RM, Oseroff C, Wriston A, Shabanowitz J, Hunt DF, Osterrieder N, Peters B, Antczak DF, Sette A. The common equine class I molecule Eqca-1*00101 (ELA-A3.1) is characterized by narrow peptide binding and T cell epitope repertoires. Immunogenetics. PMID 26399241 DOI: 10.1007/s00251-015-0872-z  0.52
2015 Abelin JG, Trantham PD, Penny SA, Patterson AM, Ward ST, Hildebrand WH, Cobbold M, Bai DL, Shabanowitz J, Hunt DF. Complementary IMAC enrichment methods for HLA-associated phosphopeptide identification by mass spectrometry. Nature Protocols. 10: 1308-18. PMID 26247297 DOI: 10.1038/nprot.2015.086  0.52
2015 Metushi IG, Wriston A, Banerjee P, Gohlke BO, English AM, Lucas A, Moore C, Sidney J, Buus S, Ostrov DA, Mallal S, Phillips E, Shabanowitz J, Hunt DF, Preissner R, et al. Acyclovir Has Low but Detectable Influence on HLA-B*57:01 Specificity without Inducing Hypersensitivity. Plos One. 10: e0124878. PMID 26024233 DOI: 10.1371/journal.pone.0124878  0.84
2015 Juanes-Garcia A, Chapman JR, Aguilar-Cuenca R, Delgado-Arevalo C, Hodges J, Whitmore LA, Shabanowitz J, Hunt DF, Horwitz AR, Vicente-Manzanares M. A regulatory motif in nonmuscle myosin II-B regulates its role in migratory front-back polarity. The Journal of Cell Biology. 209: 23-32. PMID 25869664 DOI: 10.1083/jcb.201407059  0.52
2015 Anderson LC, English AM, Wang W, Bai DL, Shabanowitz J, Hunt DF. Protein derivatization and sequential ion/ion reactions to enhance sequence coverage produced by electron transfer dissociation mass spectrometry. International Journal of Mass Spectrometry. 377: 617-624. PMID 25844056 DOI: 10.1016/j.ijms.2014.06.023  0.84
2015 Hunt DF, Shabanowitz J, Bai DL. Peptide Sequence Analysis by Electron Transfer Dissociation Mass Spectrometry: A Web-Based Tutorial. Journal of the American Society For Mass Spectrometry. 26: 1256-8. PMID 25821049 DOI: 10.1007/s13361-015-1105-2  0.84
2015 Onikubo T, Nicklay JJ, Xing L, Warren C, Anson B, Wang WL, Burgos ES, Ruff SE, Shabanowitz J, Cheng RH, Hunt DF, Shechter D. Developmentally Regulated Post-translational Modification of Nucleoplasmin Controls Histone Sequestration and Deposition. Cell Reports. PMID 25772360 DOI: 10.1016/j.celrep.2015.02.038  0.84
2015 Albrecht LV, Zhang L, Shabanowitz J, Purevjav E, Towbin JA, Hunt DF, Green KJ. GSK3- and PRMT-1-dependent modifications of desmoplakin control desmoplakin-cytoskeleton dynamics. The Journal of Cell Biology. 208: 597-612. PMID 25733715 DOI: 10.1083/jcb.201406020  0.52
2014 Wang WL, Anderson LC, Nicklay JJ, Chen H, Gamble MJ, Shabanowitz J, Hunt DF, Shechter D. Phosphorylation and arginine methylation mark histone H2A prior to deposition during Xenopus laevis development. Epigenetics & Chromatin. 7: 22. PMID 25302076 DOI: 10.1186/1756-8935-7-22  0.84
2014 Papazyan R, Voronina E, Chapman JR, Luperchio TR, Gilbert TM, Meier E, Mackintosh SG, Shabanowitz J, Tackett AJ, Reddy KL, Coyne RS, Hunt DF, Liu Y, Taverna SD. Methylation of histone H3K23 blocks DNA damage in pericentric heterochromatin during meiosis. Elife. 3: e02996. PMID 25161194 DOI: 10.7554/eLife.02996  0.84
2014 Bullen JW, Balsbaugh JL, Chanda D, Shabanowitz J, Hunt DF, Neumann D, Hart GW. Cross-talk between two essential nutrient-sensitive enzymes: O-GlcNAc transferase (OGT) and AMP-activated protein kinase (AMPK). The Journal of Biological Chemistry. 289: 10592-606. PMID 24563466 DOI: 10.1074/jbc.M113.523068  0.84
2013 Wu HA, Balsbaugh JL, Chandler H, Georgilis A, Zullow H, Shabanowitz J, Hunt DF, Gil J, Peters G, Bernstein E. Mitogen-activated protein kinase signaling mediates phosphorylation of polycomb ortholog Cbx7. The Journal of Biological Chemistry. 288: 36398-408. PMID 24194518 DOI: 10.1074/jbc.M113.486266  0.72
2013 Chen S, Li Y, Depontieu FR, McMiller TL, English AM, Shabanowitz J, Kos F, Sidney J, Sette A, Rosenberg SA, Hunt DF, Mariuzza RA, Topalian SL. Structure-based design of altered MHC class II-restricted peptide ligands with heterogeneous immunogenicity. Journal of Immunology (Baltimore, Md. : 1950). 191: 5097-106. PMID 24108701 DOI: 10.4049/jimmunol.1300467  0.84
2013 Cobbold M, De La Peña H, Norris A, Polefrone JM, Qian J, English AM, Cummings KL, Penny S, Turner JE, Cottine J, Abelin JG, Malaker SA, Zarling AL, Huang HW, Goodyear O, ... ... Hunt DF, et al. MHC class I-associated phosphopeptides are the targets of memory-like immunity in leukemia. Science Translational Medicine. 5: 203ra125. PMID 24048523 DOI: 10.1126/scitranslmed.3006061  0.84
2013 Berk JM, Maitra S, Dawdy AW, Shabanowitz J, Hunt DF, Wilson KL. O-Linked β-N-acetylglucosamine (O-GlcNAc) regulates emerin binding to barrier to autointegration factor (BAF) in a chromatin- and lamin B-enriched "niche". The Journal of Biological Chemistry. 288: 30192-209. PMID 24014020 DOI: 10.1074/jbc.M113.503060  0.84
2013 Earley L, Anderson LC, Bai DL, Mullen C, Syka JE, English AM, Dunyach JJ, Stafford GC, Shabanowitz J, Hunt DF, Compton PD. Front-end electron transfer dissociation: a new ionization source. Analytical Chemistry. 85: 8385-90. PMID 23909443 DOI: 10.1021/ac401783f  0.84
2013 Bailey AO, Panchenko T, Sathyan KM, Petkowski JJ, Pai PJ, Bai DL, Russell DH, Macara IG, Shabanowitz J, Hunt DF, Black BE, Foltz DR. Posttranslational modification of CENP-A influences the conformation of centromeric chromatin. Proceedings of the National Academy of Sciences of the United States of America. 110: 11827-32. PMID 23818633 DOI: 10.1073/pnas.1300325110  0.84
2013 Pérez Jde J, Udeshi ND, Shabanowitz J, Ciordia S, Juárez S, Scott CL, Olszewski NE, Hunt DF, García JA. O-GlcNAc modification of the coat protein of the potyvirus Plum pox virus enhances viral infection. Virology. 442: 122-31. PMID 23639873 DOI: 10.1016/j.virol.2013.03.029  0.84
2013 Abreu CM, Kumar R, Hamilton D, Dawdy AW, Creavin K, Eivers S, Finn K, Balsbaugh JL, O'Connor R, Kiely PA, Shabanowitz J, Hunt DF, Grenon M, Lowndes NF. Site-specific phosphorylation of the DNA damage response mediator rad9 by cyclin-dependent kinases regulates activation of checkpoint kinase 1. Plos Genetics. 9: e1003310. PMID 23593009 DOI: 10.1371/journal.pgen.1003310  0.84
2013 Mothé BR, Southwood S, Sidney J, English AM, Wriston A, Hoof I, Shabanowitz J, Hunt DF, Sette A. Peptide-binding motifs associated with MHC molecules common in Chinese rhesus macaques are analogous to those of human HLA supertypes and include HLA-B27-like alleles. Immunogenetics. 65: 371-86. PMID 23417323 DOI: 10.1007/s00251-013-0686-9  0.84
2013 Kim YC, Jahren N, Stone MD, Udeshi ND, Markowski TW, Witthuhn BA, Shabanowitz J, Hunt DF, Olszewski NE. Identification and origin of N-linked β-D-N-acetylglucosamine monosaccharide modifications on Arabidopsis proteins. Plant Physiology. 161: 455-64. PMID 23144189 DOI: 10.1104/pp.112.208900  0.84
2012 Mitchell DJ, Blasier KR, Jeffery ED, Ross MW, Pullikuth AK, Suo D, Park J, Smiley WR, Lo KW, Shabanowitz J, Deppmann CD, Trinidad JC, Hunt DF, Catling AD, Pfister KK. Trk activation of the ERK1/2 kinase pathway stimulates intermediate chain phosphorylation and recruits cytoplasmic dynein to signaling endosomes for retrograde axonal transport. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 15495-510. PMID 23115187 DOI: 10.1523/JNEUROSCI.5599-11.2012  0.84
2012 Petkowski JJ, Schaner Tooley CE, Anderson LC, Shumilin IA, Balsbaugh JL, Shabanowitz J, Hunt DF, Minor W, Macara IG. Substrate specificity of mammalian N-terminal α-amino methyltransferase NRMT. Biochemistry. 51: 5942-50. PMID 22769851 DOI: 10.1021/bi300278f  0.84
2012 Ostrov DA, Grant BJ, Pompeu YA, Sidney J, Harndahl M, Southwood S, Oseroff C, Lu S, Jakoncic J, de Oliveira CA, Yang L, Mei H, Shi L, Shabanowitz J, English AM, ... ... Hunt DF, et al. Drug hypersensitivity caused by alteration of the MHC-presented self-peptide repertoire. Proceedings of the National Academy of Sciences of the United States of America. 109: 9959-64. PMID 22645359 DOI: 10.1073/pnas.1207934109  0.84
2012 Alfaro JF, Gong CX, Monroe ME, Aldrich JT, Clauss TR, Purvine SO, Wang Z, Camp DG, Shabanowitz J, Stanley P, Hart GW, Hunt DF, Yang F, Smith RD. Tandem mass spectrometry identifies many mouse brain O-GlcNAcylated proteins including EGF domain-specific O-GlcNAc transferase targets. Proceedings of the National Academy of Sciences of the United States of America. 109: 7280-5. PMID 22517741 DOI: 10.1073/pnas.1200425109  0.84
2012 Wu D, Chapman JR, Wang L, Harris TE, Shabanowitz J, Hunt DF, Fu Z. Intestinal cell kinase (ICK) promotes activation of mTOR complex 1 (mTORC1) through phosphorylation of Raptor Thr-908. The Journal of Biological Chemistry. 287: 12510-9. PMID 22356909 DOI: 10.1074/jbc.M111.302117  0.84
2012 Sridhara V, Bai DL, Chi A, Shabanowitz J, Hunt DF, Bryant SH, Geer LY. Increasing peptide identifications and decreasing search times for ETD spectra by pre-processing and calculation of parent precursor charge. Proteome Science. 10: 8. PMID 22321509 DOI: 10.1186/1477-5956-10-8  0.84
2012 Moore C, Sidney J, English AM, Wriston A, Hunt DF, Shabanowitz J, Southwood S, Bradley K, Lafont BA, Mothé BR, Sette A. Identification of the peptide-binding motif recognized by the pigtail macaque class I MHC molecule Mane-A1*082:01 (Mane A*0301). Immunogenetics. 64: 461-8. PMID 22278177 DOI: 10.1007/s00251-012-0600-x  0.84
2012 Compton PD, Strukl JV, Bai DL, Shabanowitz J, Hunt DF. Optimization of electron transfer dissociation via informed selection of reagents and operating parameters. Analytical Chemistry. 84: 1781-5. PMID 22182179 DOI: 10.1021/ac202807h  0.84
2011 Wilczek C, Chitta R, Woo E, Shabanowitz J, Chait BT, Hunt DF, Shechter D. Protein arginine methyltransferase Prmt5-Mep50 methylates histones H2A and H4 and the histone chaperone nucleoplasmin in Xenopus laevis eggs. The Journal of Biological Chemistry. 286: 42221-31. PMID 22009756 DOI: 10.1074/jbc.M111.303677  0.84
2011 Kim YC, Udeshi ND, Balsbaugh JL, Shabanowitz J, Hunt DF, Olszewski NE. O-GlcNAcylation of the Plum pox virus capsid protein catalyzed by SECRET AGENT: characterization of O-GlcNAc sites by electron transfer dissociation mass spectrometry. Amino Acids. 40: 869-76. PMID 20676902 DOI: 10.1007/s00726-010-0706-0  0.84
2010 Gordon V, Bhadel S, Wunderlich W, Zhang J, Ficarro SB, Mollah SA, Shabanowitz J, Hunt DF, Xenarios I, Hahn WC, Conaway M, Carey MF, Gioeli D. CDK9 regulates AR promoter selectivity and cell growth through serine 81 phosphorylation. Molecular Endocrinology (Baltimore, Md.). 24: 2267-80. PMID 20980437 DOI: 10.1210/me.2010-0238  0.84
2010 Hao Y, Du Q, Chen X, Zheng Z, Balsbaugh JL, Maitra S, Shabanowitz J, Hunt DF, Macara IG. Par3 controls epithelial spindle orientation by aPKC-mediated phosphorylation of apical Pins. Current Biology : Cb. 20: 1809-18. PMID 20933426 DOI: 10.1016/j.cub.2010.09.032  0.84
2010 Hall EH, Balsbaugh JL, Rose KL, Shabanowitz J, Hunt DF, Brautigan DL. Comprehensive analysis of phosphorylation sites in Tensin1 reveals regulation by p38MAPK. Molecular & Cellular Proteomics : McP. 9: 2853-63. PMID 20798394 DOI: 10.1074/mcp.M110.003665  0.84
2010 Tooley CE, Petkowski JJ, Muratore-Schroeder TL, Balsbaugh JL, Shabanowitz J, Sabat M, Minor W, Hunt DF, Macara IG. NRMT is an alpha-N-methyltransferase that methylates RCC1 and retinoblastoma protein. Nature. 466: 1125-8. PMID 20668449 DOI: 10.1038/nature09343  0.84
2010 Li Y, Depontieu FR, Sidney J, Salay TM, Engelhard VH, Hunt DF, Sette A, Topalian SL, Mariuzza RA. Structural basis for the presentation of tumor-associated MHC class II-restricted phosphopeptides to CD4+ T cells. Journal of Molecular Biology. 399: 596-603. PMID 20417641 DOI: 10.1016/j.jmb.2010.04.037  0.84
2010 Baker SP, Phillips J, Anderson S, Qiu Q, Shabanowitz J, Smith MM, Yates JR, Hunt DF, Grant PA. Histone H3 Thr 45 phosphorylation is a replication-associated post-translational modification in S. cerevisiae. Nature Cell Biology. 12: 294-8. PMID 20139971 DOI: 10.1038/ncb2030  0.84
2010 Brims DR, Qian J, Jarchum I, Mikesh L, Palmieri E, Ramagopal UA, Malashkevich VN, Chaparro RJ, Lund T, Hattori M, Shabanowitz J, Hunt DF, Nathenson SG, Almo SC, Dilorenzo TP. Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect. International Immunology. 22: 191-203. PMID 20093428 DOI: 10.1093/intimm/dxp127  0.84
2010 Wang Z, Udeshi ND, Slawson C, Compton PD, Sakabe K, Cheung WD, Shabanowitz J, Hunt DF, Hart GW. Extensive crosstalk between O-GlcNAcylation and phosphorylation regulates cytokinesis. Science Signaling. 3: ra2. PMID 20068230 DOI: 10.1126/scisignal.2000526  0.84
2010 Wang Z, Udeshi ND, O'Malley M, Shabanowitz J, Hunt DF, Hart GW. Enrichment and site mapping of O-linked N-acetylglucosamine by a combination of chemical/enzymatic tagging, photochemical cleavage, and electron transfer dissociation mass spectrometry. Molecular & Cellular Proteomics : McP. 9: 153-60. PMID 19692427 DOI: 10.1074/mcp.M900268-MCP200  0.84
2010 Hendrickson RC, Cicinnati VR, Albers A, Dworacki G, Gambotto A, Pagliano O, Tüting T, Mayordomo JI, Visus C, Appella E, Shabanowitz J, Hunt DF, DeLeo AB. Identification of a 17beta-hydroxysteroid dehydrogenase type 12 pseudogene as the source of a highly restricted BALB/c Meth A tumor rejection peptide. Cancer Immunology, Immunotherapy : Cii. 59: 113-24. PMID 19562340 DOI: 10.1007/s00262-009-0730-7  0.84
2009 Dryhurst D, Ishibashi T, Rose KL, Eirín-López JM, McDonald D, Silva-Moreno B, Veldhoen N, Helbing CC, Hendzel MJ, Shabanowitz J, Hunt DF, Ausió J. Characterization of the histone H2A.Z-1 and H2A.Z-2 isoforms in vertebrates. Bmc Biology. 7: 86. PMID 20003410 DOI: 10.1186/1741-7007-7-86  0.84
2009 Basu A, Rose KL, Zhang J, Beavis RC, Ueberheide B, Garcia BA, Chait B, Zhao Y, Hunt DF, Segal E, Allis CD, Hake SB. Proteome-wide prediction of acetylation substrates. Proceedings of the National Academy of Sciences of the United States of America. 106: 13785-90. PMID 19666589 DOI: 10.1073/pnas.0906801106  0.84
2009 Depontieu FR, Qian J, Zarling AL, McMiller TL, Salay TM, Norris A, English AM, Shabanowitz J, Engelhard VH, Hunt DF, Topalian SL. Identification of tumor-associated, MHC class II-restricted phosphopeptides as targets for immunotherapy. Proceedings of the National Academy of Sciences of the United States of America. 106: 12073-8. PMID 19581576 DOI: 10.1073/pnas.0903852106  0.84
2009 Ishibashi T, Dryhurst D, Rose KL, Shabanowitz J, Hunt DF, Ausió J. Acetylation of vertebrate H2A.Z and its effect on the structure of the nucleosome. Biochemistry. 48: 5007-17. PMID 19385636 DOI: 10.1021/bi900196c  0.84
2009 Good DM, Wenger CD, McAlister GC, Bai DL, Hunt DF, Coon JJ. Post-acquisition ETD spectral processing for increased peptide identifications. Journal of the American Society For Mass Spectrometry. 20: 1435-40. PMID 19362853 DOI: 10.1016/j.jasms.2009.03.006  0.84
2009 Platt MD, Salicioni AM, Hunt DF, Visconti PE. Use of differential isotopic labeling and mass spectrometry to analyze capacitation-associated changes in the phosphorylation status of mouse sperm proteins. Journal of Proteome Research. 8: 1431-40. PMID 19186949 DOI: 10.1021/pr800796j  0.84
2009 Shechter D, Chitta RK, Xiao A, Shabanowitz J, Hunt DF, Allis CD. A distinct H2A.X isoform is enriched in Xenopus laevis eggs and early embryos and is phosphorylated in the absence of a checkpoint. Proceedings of the National Academy of Sciences of the United States of America. 106: 749-54. PMID 19131518 DOI: 10.1073/pnas.0812207106  0.84
2009 Chen F, Spano A, Goodman BE, Blasier KR, Sabat A, Jeffery E, Norris A, Shabanowitz J, Hunt DF, Lebedev N. Proteomic analysis and identification of the structural and regulatory proteins of the Rhodobacter capsulatus gene transfer agent. Journal of Proteome Research. 8: 967-73. PMID 19105630 DOI: 10.1021/pr8006045  0.84
2009 Housley MP, Udeshi ND, Rodgers JT, Shabanowitz J, Puigserver P, Hunt DF, Hart GW. A PGC-1alpha-O-GlcNAc transferase complex regulates FoxO transcription factor activity in response to glucose. The Journal of Biological Chemistry. 284: 5148-57. PMID 19103600 DOI: 10.1074/jbc.M808890200  0.84
2009 Witze ES, Field ED, Hunt DF, Rothman JH. C. elegans pur alpha, an activator of end-1, synergizes with the Wnt pathway to specify endoderm. Developmental Biology. 327: 12-23. PMID 19084000 DOI: 10.1016/j.ydbio.2008.11.015  0.84
2009 Shechter D, Nicklay JJ, Chitta RK, Shabanowitz J, Hunt DF, Allis CD. Analysis of histones in Xenopus laevis. I. A distinct index of enriched variants and modifications exists in each cell type and is remodeled during developmental transitions. The Journal of Biological Chemistry. 284: 1064-74. PMID 18957438 DOI: 10.1074/jbc.M807273200  0.84
2009 Nicklay JJ, Shechter D, Chitta RK, Garcia BA, Shabanowitz J, Allis CD, Hunt DF. Analysis of histones in Xenopus laevis. II. mass spectrometry reveals an index of cell type-specific modifications on H3 and H4. The Journal of Biological Chemistry. 284: 1075-85. PMID 18957437 DOI: 10.1074/jbc.M807274200  0.84
2008 Duncan EM, Muratore-Schroeder TL, Cook RG, Garcia BA, Shabanowitz J, Hunt DF, Allis CD. Cathepsin L proteolytically processes histone H3 during mouse embryonic stem cell differentiation. Cell. 135: 284-94. PMID 18957203 DOI: 10.1016/j.cell.2008.09.055  0.84
2008 Udeshi ND, Compton PD, Shabanowitz J, Hunt DF, Rose KL. Methods for analyzing peptides and proteins on a chromatographic timescale by electron-transfer dissociation mass spectrometry. Nature Protocols. 3: 1709-17. PMID 18927556 DOI: 10.1038/nprot.2008.159  0.84
2008 Mohammed F, Cobbold M, Zarling AL, Salim M, Barrett-Wilt GA, Shabanowitz J, Hunt DF, Engelhard VH, Willcox BE. Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self. Nature Immunology. 9: 1236-43. PMID 18836451 DOI: 10.1038/ni.1660  0.84
2008 Eisinger-Mathason TS, Andrade J, Groehler AL, Clark DE, Muratore-Schroeder TL, Pasic L, Smith JA, Shabanowitz J, Hunt DF, Macara IG, Lannigan DA. Codependent functions of RSK2 and the apoptosis-promoting factor TIA-1 in stress granule assembly and cell survival. Molecular Cell. 31: 722-36. PMID 18775331 DOI: 10.1016/j.molcel.2008.06.025  0.84
2008 Rose KL, Li A, Zalenskaya I, Zhang Y, Unni E, Hodgson KC, Yu Y, Shabanowitz J, Meistrich ML, Hunt DF, Ausió J. C-terminal phosphorylation of murine testis-specific histone H1t in elongating spermatids. Journal of Proteome Research. 7: 4070-8. PMID 18698803 DOI: 10.1021/pr8003908  0.84
2008 Angelucci C, Barrett-Wilt GA, Hunt DF, Akhurst RJ, East PD, Gordon KH, Campbell PM. Diversity of aminopeptidases, derived from four lepidopteran gene duplications, and polycalins expressed in the midgut of Helicoverpa armigera: identification of proteins binding the delta-endotoxin, Cry1Ac of Bacillus thuringiensis. Insect Biochemistry and Molecular Biology. 38: 685-96. PMID 18549954 DOI: 10.1016/j.ibmb.2008.03.010  0.84
2008 Rowlett RM, Chrestensen CA, Schroeder MJ, Harp MG, Pelo JW, Shabanowitz J, DeRose R, Hunt DF, Sturgill TW, Worthington MT. Inhibition of tristetraprolin deadenylation by poly(A) binding protein. American Journal of Physiology. Gastrointestinal and Liver Physiology. 295: G421-30. PMID 18467502 DOI: 10.1152/ajpgi.00508.2007  0.84
2008 Prickett TD, Ninomiya-Tsuji J, Broglie P, Muratore-Schroeder TL, Shabanowitz J, Hunt DF, Brautigan DL. TAB4 stimulates TAK1-TAB1 phosphorylation and binds polyubiquitin to direct signaling to NF-kappaB. The Journal of Biological Chemistry. 283: 19245-54. PMID 18456659 DOI: 10.1074/jbc.M800943200  0.84
2008 Housley MP, Rodgers JT, Udeshi ND, Kelly TJ, Shabanowitz J, Hunt DF, Puigserver P, Hart GW. O-GlcNAc regulates FoxO activation in response to glucose. The Journal of Biological Chemistry. 283: 16283-92. PMID 18420577 DOI: 10.1074/jbc.M802240200  0.84
2008 Bernstein E, Muratore-Schroeder TL, Diaz RL, Chow JC, Changolkar LN, Shabanowitz J, Heard E, Pehrson JR, Hunt DF, Allis CD. A phosphorylated subpopulation of the histone variant macroH2A1 is excluded from the inactive X chromosome and enriched during mitosis. Proceedings of the National Academy of Sciences of the United States of America. 105: 1533-8. PMID 18227505 DOI: 10.1073/pnas.0711632105  0.84
2008 Platt MD, Schurr MJ, Sauer K, Vazquez G, Kukavica-Ibrulj I, Potvin E, Levesque RC, Fedynak A, Brinkman FS, Schurr J, Hwang SH, Lau GW, Limbach PA, Rowe JJ, Lieberman MA, ... ... Hunt DF, et al. Proteomic, microarray, and signature-tagged mutagenesis analyses of anaerobic Pseudomonas aeruginosa at pH 6.5, likely representing chronic, late-stage cystic fibrosis airway conditions. Journal of Bacteriology. 190: 2739-58. PMID 18203836 DOI: 10.1128/JB.01683-07  0.84
2008 Calvert ME, Keck KM, Ptak C, Shabanowitz J, Hunt DF, Pemberton LF. Phosphorylation by casein kinase 2 regulates Nap1 localization and function. Molecular and Cellular Biology. 28: 1313-25. PMID 18086883 DOI: 10.1128/MCB.01035-07  0.84
2007 Udeshi ND, Shabanowitz J, Hunt DF, Rose KL. Analysis of proteins and peptides on a chromatographic timescale by electron-transfer dissociation MS. The Febs Journal. 274: 6269-76. PMID 18021239 DOI: 10.1111/j.1742-4658.2007.06148.x  0.84
2007 Mayhew MW, Jeffery ED, Sherman NE, Nelson K, Polefrone JM, Pratt SJ, Shabanowitz J, Parsons JT, Fox JW, Hunt DF, Horwitz AF. Identification of phosphorylation sites in betaPIX and PAK1. Journal of Cell Science. 120: 3911-8. PMID 17989089 DOI: 10.1242/jcs.008177  0.84
2007 Chi A, Valenzuela L, Beard S, Mackey AJ, Shabanowitz J, Hunt DF, Jerez CA. Periplasmic proteins of the extremophile Acidithiobacillus ferrooxidans: a high throughput proteomics analysis. Molecular & Cellular Proteomics : McP. 6: 2239-51. PMID 17911085 DOI: 10.1074/mcp.M700042-MCP200  0.84
2007 Hunt DF, Henderson RA, Shabanowitz J, Sakaguchi K, Michel H, Sevilir N, Cox AL, Appella E, Engelhard VH. Pillars article: Characterization of peptides bound to the class I MHC molecule HLA-A2.1 by mass spectrometry. Science 1992. 255: 1261-1263. Journal of Immunology (Baltimore, Md. : 1950). 179: 2669-71. PMID 17709476  0.84
2007 Liu Y, Taverna SD, Muratore TL, Shabanowitz J, Hunt DF, Allis CD. RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena. Genes & Development. 21: 1530-45. PMID 17575054 DOI: 10.1101/gad.1544207  0.84
2007 Garcia BA, Mollah S, Ueberheide BM, Busby SA, Muratore TL, Shabanowitz J, Hunt DF. Chemical derivatization of histones for facilitated analysis by mass spectrometry. Nature Protocols. 2: 933-8. PMID 17446892 DOI: 10.1038/nprot.2007.106  0.84
2007 Goldfinger LE, Ptak C, Jeffery ED, Shabanowitz J, Han J, Haling JR, Sherman NE, Fox JW, Hunt DF, Ginsberg MH. An experimentally derived database of candidate Ras-interacting proteins. Journal of Proteome Research. 6: 1806-11. PMID 17439166 DOI: 10.1021/pr060630l  0.84
2007 Chen T, Muratore TL, Schaner-Tooley CE, Shabanowitz J, Hunt DF, Macara IG. N-terminal alpha-methylation of RCC1 is necessary for stable chromatin association and normal mitosis. Nature Cell Biology. 9: 596-603. PMID 17435751 DOI: 10.1038/ncb1572  0.84
2007 Frum R, Busby SA, Ramamoorthy M, Deb S, Shabanowitz J, Hunt DF, Deb SP. HDM2-binding partners: interaction with translation elongation factor EF1alpha. Journal of Proteome Research. 6: 1410-7. PMID 17373842 DOI: 10.1021/pr060584p  0.84
2007 Chi A, Bai DL, Geer LY, Shabanowitz J, Hunt DF. Analysis of intact proteins on a chromatographic time scale by electron transfer dissociation tandem mass spectrometry. International Journal of Mass Spectrometry. 259: 197-203. PMID 17364019 DOI: 10.1016/j.ijms.2006.09.030  0.84
2007 Luo W, Peterson A, Garcia BA, Coombs G, Kofahl B, Heinrich R, Shabanowitz J, Hunt DF, Yost HJ, Virshup DM. Protein phosphatase 1 regulates assembly and function of the beta-catenin degradation complex. The Embo Journal. 26: 1511-21. PMID 17318175 DOI: 10.1038/sj.emboj.7601607  0.84
2007 Chi A, Huttenhower C, Geer LY, Coon JJ, Syka JE, Bai DL, Shabanowitz J, Burke DJ, Troyanskaya OG, Hunt DF. Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 104: 2193-8. PMID 17287358 DOI: 10.1073/pnas.0607084104  0.84
2007 Taverna SD, Ueberheide BM, Liu Y, Tackett AJ, Diaz RL, Shabanowitz J, Chait BT, Hunt DF, Allis CD. Long-distance combinatorial linkage between methylation and acetylation on histone H3 N termini. Proceedings of the National Academy of Sciences of the United States of America. 104: 2086-91. PMID 17284592 DOI: 10.1073/pnas.0610993104  0.84
2007 Garcia BA, Hake SB, Diaz RL, Kauer M, Morris SA, Recht J, Shabanowitz J, Mishra N, Strahl BD, Allis CD, Hunt DF. Organismal differences in post-translational modifications in histones H3 and H4. The Journal of Biological Chemistry. 282: 7641-55. PMID 17194708 DOI: 10.1074/jbc.M607900200  0.84
2007 Morris SA, Rao B, Garcia BA, Hake SB, Diaz RL, Shabanowitz J, Hunt DF, Allis CD, Lieb JD, Strahl BD. Identification of histone H3 lysine 36 acetylation as a highly conserved histone modification. The Journal of Biological Chemistry. 282: 7632-40. PMID 17189264 DOI: 10.1074/jbc.M607909200  0.84
2007 Lin CH, Platt MD, Ficarro SB, Hoofnagle MH, Shabanowitz J, Comai L, Hunt DF, Owens GK. Mass spectrometric identification of phosphorylation sites of rRNA transcription factor upstream binding factor. American Journal of Physiology. Cell Physiology. 292: C1617-24. PMID 17182730 DOI: 10.1152/ajpcell.00176.2006  0.84
2007 Garcia BA, Shabanowitz J, Hunt DF. Characterization of histones and their post-translational modifications by mass spectrometry. Current Opinion in Chemical Biology. 11: 66-73. PMID 17157550 DOI: 10.1016/j.cbpa.2006.11.022  0.84
2007 Herlevsen M, Oxford G, Ptak C, Shabanowitz J, Hunt DF, Conaway M, Theodorescu D. A novel model to identify interaction partners of the PTEN tumor suppressor gene in human bladder cancer. Biochemical and Biophysical Research Communications. 352: 549-55. PMID 17126809 DOI: 10.1016/j.bbrc.2006.11.067  0.84
2007 Harris TE, Huffman TA, Chi A, Shabanowitz J, Hunt DF, Kumar A, Lawrence JC. Insulin controls subcellular localization and multisite phosphorylation of the phosphatidic acid phosphatase, lipin 1. The Journal of Biological Chemistry. 282: 277-86. PMID 17105729 DOI: 10.1074/jbc.M609537200  0.84
2006 Yue GE, Roper MG, Balchunas C, Pulsipher A, Coon JJ, Shabanowitz J, Hunt DF, Landers JP, Ferrance JP. Protein digestion and phosphopeptide enrichment on a glass microchip. Analytica Chimica Acta. 564: 116-22. PMID 17723369 DOI: 10.1016/j.aca.2005.11.003  0.84
2006 Borovsky D, Rabindran S, Dawson WO, Powell CA, Iannotti DA, Morris TJ, Shabanowitz J, Hunt DF, DeBondt HL, DeLoof A. Expression of Aedes trypsin-modulating oostatic factor on the virion of TMV: A potential larvicide. Proceedings of the National Academy of Sciences of the United States of America. 103: 18963-8. PMID 17148608 DOI: 10.1073/pnas.0606146103  0.84
2006 Mikesh LM, Ueberheide B, Chi A, Coon JJ, Syka JE, Shabanowitz J, Hunt DF. The utility of ETD mass spectrometry in proteomic analysis. Biochimica Et Biophysica Acta. 1764: 1811-22. PMID 17118725 DOI: 10.1016/j.bbapap.2006.10.003  0.84
2006 Dorus S, Busby SA, Gerike U, Shabanowitz J, Hunt DF, Karr TL. Genomic and functional evolution of the Drosophila melanogaster sperm proteome. Nature Genetics. 38: 1440-5. PMID 17099714 DOI: 10.1038/ng1915  0.84
2006 Chi A, Valencia JC, Hu ZZ, Watabe H, Yamaguchi H, Mangini NJ, Huang H, Canfield VA, Cheng KC, Yang F, Abe R, Yamagishi S, Shabanowitz J, Hearing VJ, Wu C, ... ... Hunt DF, et al. Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. Journal of Proteome Research. 5: 3135-44. PMID 17081065 DOI: 10.1021/pr060363j  0.84
2006 Altrich-VanLith ML, Ostankovitch M, Polefrone JM, Mosse CA, Shabanowitz J, Hunt DF, Engelhard VH. Processing of a class I-restricted epitope from tyrosinase requires peptide N-glycanase and the cooperative action of endoplasmic reticulum aminopeptidase 1 and cytosolic proteases. Journal of Immunology (Baltimore, Md. : 1950). 177: 5440-50. PMID 17015730  0.84
2006 Zarling AL, Polefrone JM, Evans AM, Mikesh LM, Shabanowitz J, Lewis ST, Engelhard VH, Hunt DF. Identification of class I MHC-associated phosphopeptides as targets for cancer immunotherapy. Proceedings of the National Academy of Sciences of the United States of America. 103: 14889-94. PMID 17001009 DOI: 10.1073/pnas.0604045103  0.84
2006 Li Y, Kao GD, Garcia BA, Shabanowitz J, Hunt DF, Qin J, Phelan C, Lazar MA. A novel histone deacetylase pathway regulates mitosis by modulating Aurora B kinase activity. Genes & Development. 20: 2566-79. PMID 16980585 DOI: 10.1101/gad.1455006  0.84
2006 Garcia BA, Platt MD, Born TL, Shabanowitz J, Marcus NA, Hunt DF. Protein profile of osteoarthritic human articular cartilage using tandem mass spectrometry. Rapid Communications in Mass Spectrometry : Rcm. 20: 2999-3006. PMID 16969770 DOI: 10.1002/rcm.2692  0.84
2006 Goldfinger LE, Ptak C, Jeffery ED, Shabanowitz J, Hunt DF, Ginsberg MH. RLIP76 (RalBP1) is an R-Ras effector that mediates adhesion-dependent Rac activation and cell migration. The Journal of Cell Biology. 174: 877-88. PMID 16966426 DOI: 10.1083/jcb.200603111  0.84
2006 Klimowski LK, Garcia BA, Shabanowitz J, Hunt DF, Virshup DM. Site-specific casein kinase 1epsilon-dependent phosphorylation of Dishevelled modulates beta-catenin signaling. The Febs Journal. 273: 4594-602. PMID 16965538 DOI: 10.1111/j.1742-4658.2006.05462.x  0.84
2006 Fu Z, Larson KA, Chitta RK, Parker SA, Turk BE, Lawrence MW, Kaldis P, Galaktionov K, Cohn SM, Shabanowitz J, Hunt DF, Sturgill TW. Identification of yin-yang regulators and a phosphorylation consensus for male germ cell-associated kinase (MAK)-related kinase. Molecular and Cellular Biology. 26: 8639-54. PMID 16954377 DOI: 10.1128/MCB.00816-06  0.84
2006 Mosoian A, Teixeira A, High AA, Christian RE, Hunt DF, Shabanowitz J, Liu X, Klotman M. Novel function of prothymosin alpha as a potent inhibitor of human immunodeficiency virus type 1 gene expression in primary macrophages. Journal of Virology. 80: 9200-6. PMID 16940531 DOI: 10.1128/JVI.00589-06  0.84
2006 Garcia BA, Joshi S, Thomas CE, Chitta RK, Diaz RL, Busby SA, Andrews PC, Ogorzalek Loo RR, Shabanowitz J, Kelleher NL, Mizzen CA, Allis CD, Hunt DF. Comprehensive phosphoprotein analysis of linker histone H1 from Tetrahymena thermophila. Molecular & Cellular Proteomics : McP. 5: 1593-609. PMID 16835217 DOI: 10.1074/mcp.M600086-MCP200  0.84
2006 Martin KH, Jeffery ED, Grigera PR, Shabanowitz J, Hunt DF, Parsons JT. Cortactin phosphorylation sites mapped by mass spectrometry. Journal of Cell Science. 119: 2851-3. PMID 16825425 DOI: 10.1242/jcs03034  0.84
2006 Webb DJ, Mayhew MW, Kovalenko M, Schroeder MJ, Jeffery ED, Whitmore L, Shabanowitz J, Hunt DF, Horwitz AF. Identification of phosphorylation sites in GIT1. Journal of Cell Science. 119: 2847-50. PMID 16825424 DOI: 10.1242/jcs03044  0.84
2006 Auphan-Anezin N, Mazza C, Guimezanes A, Barrett-Wilt GA, Montero-Julian F, Roussel A, Hunt DF, Malissen B, Schmitt-Verhulst AM. Distinct orientation of the alloreactive monoclonal CD8 T cell activation program by three different peptide/MHC complexes. European Journal of Immunology. 36: 1856-66. PMID 16761314 DOI: 10.1002/eji.200635895  0.84
2006 Frehlick LJ, Eirín-López JM, Jeffery ED, Hunt DF, Ausió J. The characterization of amphibian nucleoplasmins yields new insight into their role in sperm chromatin remodeling. Bmc Genomics. 7: 99. PMID 16646973 DOI: 10.1186/1471-2164-7-99  0.84
2006 Recht J, Tsubota T, Tanny JC, Diaz RL, Berger JM, Zhang X, Garcia BA, Shabanowitz J, Burlingame AL, Hunt DF, Kaufman PD, Allis CD. Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis. Proceedings of the National Academy of Sciences of the United States of America. 103: 6988-93. PMID 16627621 DOI: 10.1073/pnas.0601676103  0.84
2006 Li J, Riehle MM, Zhang Y, Xu J, Oduol F, Gomez SM, Eiglmeier K, Ueberheide BM, Shabanowitz J, Hunt DF, Ribeiro JM, Vernick KD. Anopheles gambiae genome reannotation through synthesis of ab initio and comparative gene prediction algorithms. Genome Biology. 7: R24. PMID 16569258 DOI: 10.1186/gb-2006-7-3-r24  0.84
2006 Harris TE, Chi A, Shabanowitz J, Hunt DF, Rhoads RE, Lawrence JC. mTOR-dependent stimulation of the association of eIF4G and eIF3 by insulin. The Embo Journal. 25: 1659-68. PMID 16541103 DOI: 10.1038/sj.emboj.7601047  0.84
2006 Swiatek W, Kang H, Garcia BA, Shabanowitz J, Coombs GS, Hunt DF, Virshup DM. Negative regulation of LRP6 function by casein kinase I epsilon phosphorylation. The Journal of Biological Chemistry. 281: 12233-41. PMID 16513652 DOI: 10.1074/jbc.M510580200  0.84
2006 Valencia JC, Watabe H, Chi A, Rouzaud F, Chen KG, Vieira WD, Takahashi K, Yamaguchi Y, Berens W, Nagashima K, Shabanowitz J, Hunt DF, Appella E, Hearing VJ. Sorting of Pmel17 to melanosomes through the plasma membrane by AP1 and AP2: evidence for the polarized nature of melanocytes. Journal of Cell Science. 119: 1080-91. PMID 16492709 DOI: 10.1242/jcs.02804  0.84
2006 Brickner AG, Evans AM, Mito JK, Xuereb SM, Feng X, Nishida T, Fairfull L, Ferrell RE, Foon KA, Hunt DF, Shabanowitz J, Engelhard VH, Riddell SR, Warren EH. The PANE1 gene encodes a novel human minor histocompatibility antigen that is selectively expressed in B-lymphoid cells and B-CLL. Blood. 107: 3779-86. PMID 16391015 DOI: 10.1182/blood-2005-08-3501  0.84
2006 Valenzuela L, Chi A, Beard S, Orell A, Guiliani N, Shabanowitz J, Hunt DF, Jerez CA. Genomics, metagenomics and proteomics in biomining microorganisms. Biotechnology Advances. 24: 197-211. PMID 16288845 DOI: 10.1016/j.biotechadv.2005.09.004  0.84
2006 Hake SB, Garcia BA, Duncan EM, Kauer M, Dellaire G, Shabanowitz J, Bazett-Jones DP, Allis CD, Hunt DF. Expression patterns and post-translational modifications associated with mammalian histone H3 variants. The Journal of Biological Chemistry. 281: 559-68. PMID 16267050 DOI: 10.1074/jbc.M509266200  0.84
2005 Garcia BA, Busby SA, Shabanowitz J, Hunt DF, Mishra N. Resetting the epigenetic histone code in the MRL-lpr/lpr mouse model of lupus by histone deacetylase inhibition. Journal of Proteome Research. 4: 2032-42. PMID 16335948 DOI: 10.1021/pr050188r  0.84
2005 Sibilio L, Martayan A, Setini A, Fraioli R, Fruci D, Shabanowitz J, Hunt DF, Giacomini P. Impaired assembly results in the accumulation of multiple HLA-C heavy chain folding intermediates. Journal of Immunology (Baltimore, Md. : 1950). 175: 6651-8. PMID 16272320  0.84
2005 Grigera PR, Jeffery ED, Martin KH, Shabanowitz J, Hunt DF, Parsons JT. FAK phosphorylation sites mapped by mass spectrometry. Journal of Cell Science. 118: 4931-5. PMID 16254240 DOI: 10.1242/jcs.02696  0.84
2005 Webb DJ, Schroeder MJ, Brame CJ, Whitmore L, Shabanowitz J, Hunt DF, Horwitz AR. Paxillin phosphorylation sites mapped by mass spectrometry. Journal of Cell Science. 118: 4925-9. PMID 16254239 DOI: 10.1242/jcs.02563  0.84
2005 Ratnikov B, Ptak C, Han J, Shabanowitz J, Hunt DF, Ginsberg MH. Talin phosphorylation sites mapped by mass spectrometry. Journal of Cell Science. 118: 4921-3. PMID 16254238 DOI: 10.1242/jcs.02682  0.84
2005 Fischle W, Tseng BS, Dormann HL, Ueberheide BM, Garcia BA, Shabanowitz J, Hunt DF, Funabiki H, Allis CD. Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylation. Nature. 438: 1116-22. PMID 16222246 DOI: 10.1038/nature04219  0.84
2005 Schroeder MJ, Webb DJ, Shabanowitz J, Horwitz AF, Hunt DF. Methods for the detection of paxillin post-translational modifications and interacting proteins by mass spectrometry. Journal of Proteome Research. 4: 1832-41. PMID 16212439 DOI: 10.1021/pr0502020  0.84
2005 Garcia BA, Smalley DM, Cho H, Shabanowitz J, Ley K, Hunt DF. The platelet microparticle proteome. Journal of Proteome Research. 4: 1516-21. PMID 16212402 DOI: 10.1021/pr0500760  0.84
2005 Garcia BA, Barber CM, Hake SB, Ptak C, Turner FB, Busby SA, Shabanowitz J, Moran RG, Allis CD, Hunt DF. Modifications of human histone H3 variants during mitosis. Biochemistry. 44: 13202-13. PMID 16185088 DOI: 10.1021/bi050906n  0.84
2005 Yang CH, Szeliga J, Jordan J, Faske S, Sever-Chroneos Z, Dorsett B, Christian RE, Settlage RE, Shabanowitz J, Hunt DF, Whitsett JA, Chroneos ZC. Identification of the surfactant protein A receptor 210 as the unconventional myosin 18A. The Journal of Biological Chemistry. 280: 34447-57. PMID 16087679 DOI: 10.1074/jbc.M505229200  0.84
2005 Sweeney FD, Yang F, Chi A, Shabanowitz J, Hunt DF, Durocher D. Saccharomyces cerevisiae Rad9 acts as a Mec1 adaptor to allow Rad53 activation. Current Biology : Cb. 15: 1364-75. PMID 16085488 DOI: 10.1016/j.cub.2005.06.063  0.84
2005 Fu Z, Schroeder MJ, Shabanowitz J, Kaldis P, Togawa K, Rustgi AK, Hunt DF, Sturgill TW. Activation of a nuclear Cdc2-related kinase within a mitogen-activated protein kinase-like TDY motif by autophosphorylation and cyclin-dependent protein kinase-activating kinase. Molecular and Cellular Biology. 25: 6047-64. PMID 15988018 DOI: 10.1128/MCB.25.14.6047-6064.2005  0.84
2005 Coon JJ, Ueberheide B, Syka JE, Dryhurst DD, Ausio J, Shabanowitz J, Hunt DF. Protein identification using sequential ion/ion reactions and tandem mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 102: 9463-8. PMID 15983376 DOI: 10.1073/pnas.0503189102  0.84
2005 Coon JJ, Shabanowitz J, Hunt DF, Syka JE. Electron transfer dissociation of peptide anions. Journal of the American Society For Mass Spectrometry. 16: 880-2. PMID 15907703 DOI: 10.1016/j.jasms.2005.01.015  0.84
2005 Hodges JL, Leslie JH, Mosammaparast N, Guo Y, Shabanowitz J, Hunt DF, Pemberton LF. Nuclear import of TFIIB is mediated by Kap114p, a karyopherin with multiple cargo-binding domains. Molecular Biology of the Cell. 16: 3200-10. PMID 15888545 DOI: 10.1091/mbc.E04-11-0990  0.84
2005 Coon JJ, Syka JE, Shabanowitz J, Hunt DF. Tandem mass spectrometry for peptide and protein sequence analysis. Biotechniques. 38: 519, 521, 523. PMID 15884666  0.84
2005 Hake SB, Garcia BA, Kauer M, Baker SP, Shabanowitz J, Hunt DF, Allis CD. Serine 31 phosphorylation of histone variant H3.3 is specific to regions bordering centromeres in metaphase chromosomes. Proceedings of the National Academy of Sciences of the United States of America. 102: 6344-9. PMID 15851689 DOI: 10.1073/pnas.0502413102  0.84
2005 Garcia BA, Shabanowitz J, Hunt DF. Analysis of protein phosphorylation by mass spectrometry. Methods (San Diego, Calif.). 35: 256-64. PMID 15722222 DOI: 10.1016/j.ymeth.2004.08.017  0.84
2005 Yang CS, Vitto MJ, Busby SA, Garcia BA, Kesler CT, Gioeli D, Shabanowitz J, Hunt DF, Rundell K, Brautigan DL, Paschal BM. Simian virus 40 small t antigen mediates conformation-dependent transfer of protein phosphatase 2A onto the androgen receptor. Molecular and Cellular Biology. 25: 1298-308. PMID 15684382 DOI: 10.1128/MCB.25.4.1298-1308.2005  0.84
2005 Angenstein F, Evans AM, Ling SC, Settlage RE, Ficarro S, Carrero-Martinez FA, Shabanowitz J, Hunt DF, Greenough WT. Proteomic characterization of messenger ribonucleoprotein complexes bound to nontranslated or translated poly(A) mRNAs in the rat cerebral cortex. The Journal of Biological Chemistry. 280: 6496-503. PMID 15596439 DOI: 10.1074/jbc.M412742200  0.84
2005 Hogan KT, Sutton JN, Chu KU, Busby JA, Shabanowitz J, Hunt DF, Slingluff CL. Use of selected reaction monitoring mass spectrometry for the detection of specific MHC class I peptide antigens on A3 supertype family members. Cancer Immunology, Immunotherapy : Cii. 54: 359-71. PMID 15378283 DOI: 10.1007/s00262-004-0592-y  0.84
2004 Johnson L, Mollah S, Garcia BA, Muratore TL, Shabanowitz J, Hunt DF, Jacobsen SE. Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications. Nucleic Acids Research. 32: 6511-8. PMID 15598823 DOI: 10.1093/nar/gkh992  0.84
2004 Garcia BA, Busby SA, Barber CM, Shabanowitz J, Allis CD, Hunt DF. Characterization of phosphorylation sites on histone H1 isoforms by tandem mass spectrometry. Journal of Proteome Research. 3: 1219-27. PMID 15595731 DOI: 10.1021/pr0498887  0.84
2004 Mi J, Qiao F, Wilson JB, High AA, Schroeder MJ, Stukenberg PT, Moss A, Shabanowitz J, Hunt DF, Jones NJ, Kupfer GM. FANCG is phosphorylated at serines 383 and 387 during mitosis. Molecular and Cellular Biology. 24: 8576-85. PMID 15367677 DOI: 10.1128/MCB.24.19.8576-8585.2004  0.84
2004 Syka JE, Marto JA, Bai DL, Horning S, Senko MW, Schwartz JC, Ueberheide B, Garcia B, Busby S, Muratore T, Shabanowitz J, Hunt DF. Novel linear quadrupole ion trap/FT mass spectrometer: performance characterization and use in the comparative analysis of histone H3 post-translational modifications. Journal of Proteome Research. 3: 621-6. PMID 15253445 DOI: 10.1021/pr0499794  0.84
2004 Schroeder MJ, Shabanowitz J, Schwartz JC, Hunt DF, Coon JJ. A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry. Analytical Chemistry. 76: 3590-8. PMID 15228329 DOI: 10.1021/ac0497104  0.84
2004 Syka JE, Coon JJ, Schroeder MJ, Shabanowitz J, Hunt DF. Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 101: 9528-33. PMID 15210983 DOI: 10.1073/pnas.0402700101  0.84
2004 Barber CM, Turner FB, Wang Y, Hagstrom K, Taverna SD, Mollah S, Ueberheide B, Meyer BJ, Hunt DF, Cheung P, Allis CD. The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved. Chromosoma. 112: 360-71. PMID 15133681 DOI: 10.1007/s00412-004-0281-9  0.84
2004 Thomashevski A, High AA, Drozd M, Shabanowitz J, Hunt DF, Grant PA, Kupfer GM. The Fanconi anemia core complex forms four complexes of different sizes in different subcellular compartments. The Journal of Biological Chemistry. 279: 26201-9. PMID 15082718 DOI: 10.1074/jbc.M400091200  0.84
2004 Thompson LW, Hogan KT, Caldwell JA, Pierce RA, Hendrickson RC, Deacon DH, Settlage RE, Brinckerhoff LH, Engelhard VH, Shabanowitz J, Hunt DF, Slingluff CL. Preventing the spontaneous modification of an HLA-A2-restricted peptide at an N-terminal glutamine or an internal cysteine residue enhances peptide antigenicity. Journal of Immunotherapy (Hagerstown, Md. : 1997). 27: 177-83. PMID 15076134  0.84
2004 Lan W, Zhang X, Kline-Smith SL, Rosasco SE, Barrett-Wilt GA, Shabanowitz J, Hunt DF, Walczak CE, Stukenberg PT. Aurora B phosphorylates centromeric MCAK and regulates its localization and microtubule depolymerization activity. Current Biology : Cb. 14: 273-86. PMID 14972678 DOI: 10.1016/j.cub.2004.01.055  0.84
2004 Hogan KT, Coppola MA, Gatlin CL, Thompson LW, Shabanowitz J, Hunt DF, Engelhard VH, Ross MM, Slingluff CL. Identification of novel and widely expressed cancer/testis gene isoforms that elicit spontaneous cytotoxic T-lymphocyte reactivity to melanoma. Cancer Research. 64: 1157-63. PMID 14871852 DOI: 10.1158/0008-5472.CAN-03-2209  0.84
2004 McCleland ML, Kallio MJ, Barrett-Wilt GA, Kestner CA, Shabanowitz J, Hunt DF, Gorbsky GJ, Stukenberg PT. The vertebrate Ndc80 complex contains Spc24 and Spc25 homologs, which are required to establish and maintain kinetochore-microtubule attachment. Current Biology : Cb. 14: 131-7. PMID 14738735 DOI: 10.1016/j.cub.2003.12.058  0.84
2004 Chrestensen CA, Schroeder MJ, Shabanowitz J, Hunt DF, Pelo JW, Worthington MT, Sturgill TW. MAPKAP kinase 2 phosphorylates tristetraprolin on in vivo sites including Ser178, a site required for 14-3-3 binding. The Journal of Biological Chemistry. 279: 10176-84. PMID 14688255 DOI: 10.1074/jbc.M310486200  0.84
2004 Coon JJ, Syka JEP, Schwartz JC, Shabanowitz J, Hunt DF. Anion dependence in the partitioning between proton and electron transfer in ion/ion reactions International Journal of Mass Spectrometry. 236: 33-42. DOI: 10.1016/j.ijms.2004.05.005  0.84
2003 Rice JC, Briggs SD, Ueberheide B, Barber CM, Shabanowitz J, Hunt DF, Shinkai Y, Allis CD. Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains. Molecular Cell. 12: 1591-8. PMID 14690610 DOI: 10.1016/S1097-2765(03)00479-9  0.84
2003 Hogan KT, Coppola MA, Gatlin CL, Thompson LW, Shabanowitz J, Hunt DF, Engelhard VH, Slingluff CL, Ross MM. Identification of a shared epitope recognized by melanoma-specific, HLA-A3-restricted cytotoxic T lymphocytes. Immunology Letters. 90: 131-5. PMID 14687714 DOI: 10.1016/j.imlet.2003.08.003  0.84
2003 Hassett DJ, Limbach PA, Hennigan RF, Klose KE, Hancock RE, Platt MD, Hunt DF. Bacterial biofilms of importance to medicine and bioterrorism: proteomic techniques to identify novel vaccine components and drug targets. Expert Opinion On Biological Therapy. 3: 1201-7. PMID 14640945 DOI: 10.1517/14712598.3.8.1201  0.84
2003 Zarling AL, Luckey CJ, Marto JA, White FM, Brame CJ, Evans AM, Lehner PJ, Cresswell P, Shabanowitz J, Hunt DF, Engelhard VH. Tapasin is a facilitator, not an editor, of class I MHC peptide binding. Journal of Immunology (Baltimore, Md. : 1950). 171: 5287-95. PMID 14607930  0.84
2003 Corbin RW, Paliy O, Yang F, Shabanowitz J, Platt M, Lyons CE, Root K, McAuliffe J, Jordan MI, Kustu S, Soupene E, Hunt DF. Toward a protein profile of Escherichia coli: comparison to its transcription profile. Proceedings of the National Academy of Sciences of the United States of America. 100: 9232-7. PMID 12878731 DOI: 10.1073/pnas.1533294100  0.84
2003 Lieberman SM, Evans AM, Han B, Takaki T, Vinnitskaya Y, Caldwell JA, Serreze DV, Shabanowitz J, Hunt DF, Nathenson SG, Santamaria P, DiLorenzo TP. Identification of the beta cell antigen targeted by a prevalent population of pathogenic CD8+ T cells in autoimmune diabetes. Proceedings of the National Academy of Sciences of the United States of America. 100: 8384-8. PMID 12815107 DOI: 10.1073/pnas.0932778100  0.84
2003 Seamons A, Sutton J, Bai D, Baird E, Bonn N, Kafsack BF, Shabanowitz J, Hunt DF, Beeson C, Goverman J. Competition between two MHC binding registers in a single peptide processed from myelin basic protein influences tolerance and susceptibility to autoimmunity. The Journal of Experimental Medicine. 197: 1391-7. PMID 12756272 DOI: 10.1084/jem.20022226  0.84
2003 Bandholtz L, Guo Y, Palmberg C, Mattsson K, Ohlsson B, High A, Shabanowitz J, Hunt DF, Jörnvall H, Wigzell H, Agerberth B, Gudmundsson GH. Hsp90 binds CpG oligonucleotides directly: implications for hsp90 as a missing link in CpG signaling and recognition. Cellular and Molecular Life Sciences : Cmls. 60: 422-9. PMID 12678505 DOI: 10.1007/s000180300035  0.84
2003 Spierings E, Brickner AG, Caldwell JA, Zegveld S, Tatsis N, Blokland E, Pool J, Pierce RA, Mollah S, Shabanowitz J, Eisenlohr LC, van Veelen P, Ossendorp F, Hunt DF, Goulmy E, et al. The minor histocompatibility antigen HA-3 arises from differential proteasome-mediated cleavage of the lymphoid blast crisis (Lbc) oncoprotein. Blood. 102: 621-9. PMID 12663445 DOI: 10.1182/blood-2003-01-0260  0.84
2003 Basrur V, Yang F, Kushimoto T, Higashimoto Y, Yasumoto K, Valencia J, Muller J, Vieira WD, Watabe H, Shabanowitz J, Hearing VJ, Hunt DF, Appella E. Proteomic analysis of early melanosomes: identification of novel melanosomal proteins. Journal of Proteome Research. 2: 69-79. PMID 12643545 DOI: 10.1021/pr025562r  0.84
2003 Saibil SD, Ohteki T, White FM, Luscher M, Zakarian A, Elford A, Shabanowitz J, Nishina H, Hugo P, Penninger J, Barber B, Hunt DF, Ohashi PS. Weak agonist self-peptides promote selection and tuning of virus-specific T cells. European Journal of Immunology. 33: 685-96. PMID 12616489 DOI: 10.1002/eji.200323143  0.84
2003 Ficarro S, Chertihin O, Westbrook VA, White F, Jayes F, Kalab P, Marto JA, Shabanowitz J, Herr JC, Hunt DF, Visconti PE. Phosphoproteome analysis of capacitated human sperm. Evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosin-containing protein/p97 during capacitation. The Journal of Biological Chemistry. 278: 11579-89. PMID 12509440 DOI: 10.1074/jbc.M202325200  0.84
2002 Hunt DF. Personal commentary on proteomics. Journal of Proteome Research. 1: 15-9. PMID 12643521 DOI: 10.1021/pr020300a  0.84
2002 Lippolis JD, White FM, Marto JA, Luckey CJ, Bullock TN, Shabanowitz J, Hunt DF, Engelhard VH. Analysis of MHC class II antigen processing by quantitation of peptides that constitute nested sets. Journal of Immunology (Baltimore, Md. : 1950). 169: 5089-97. PMID 12391225  0.84
2002 Angenstein F, Evans AM, Settlage RE, Moran ST, Ling SC, Klintsova AY, Shabanowitz J, Hunt DF, Greenough WT. A receptor for activated C kinase is part of messenger ribonucleoprotein complexes associated with polyA-mRNAs in neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 8827-37. PMID 12388589  0.84
2002 Thatte A, Ficarro S, Snapp KR, Wild MK, Vestweber D, Hunt DF, Ley KF. Binding of function-blocking mAbs to mouse and human P-selectin glycoprotein ligand-1 peptides with and without tyrosine sulfation. Journal of Leukocyte Biology. 72: 470-7. PMID 12223514  0.84
2002 Briggs SD, Xiao T, Sun ZW, Caldwell JA, Shabanowitz J, Hunt DF, Allis CD, Strahl BD. Gene silencing: trans-histone regulatory pathway in chromatin. Nature. 418: 498. PMID 12152067 DOI: 10.1038/nature00970  0.84
2002 Dragon F, Gallagher JE, Compagnone-Post PA, Mitchell BM, Porwancher KA, Wehner KA, Wormsley S, Settlage RE, Shabanowitz J, Osheim Y, Beyer AL, Hunt DF, Baserga SJ. A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature. 417: 967-70. PMID 12068309 DOI: 10.1038/nature00769  0.84
2002 Soupene E, Chu T, Corbin RW, Hunt DF, Kustu S. Gas channels for NH(3): proteins from hyperthermophiles complement an Escherichia coli mutant. Journal of Bacteriology. 184: 3396-400. PMID 12029058 DOI: 10.1128/JB.184.12.3396-3400.2002  0.84
2002 Gioeli D, Ficarro SB, Kwiek JJ, Aaronson D, Hancock M, Catling AD, White FM, Christian RE, Settlage RE, Shabanowitz J, Hunt DF, Weber MJ. Androgen receptor phosphorylation. Regulation and identification of the phosphorylation sites. The Journal of Biological Chemistry. 277: 29304-14. PMID 12015328 DOI: 10.1074/jbc.M204131200  0.84
2002 Flyer DC, Ramakrishna V, Miller C, Myers H, McDaniel M, Root K, Flournoy C, Engelhard VH, Canaday DH, Marto JA, Ross MM, Hunt DF, Shabanowitz J, White FM. Identification by mass spectrometry of CD8(+)-T-cell Mycobacterium tuberculosis epitopes within the Rv0341 gene product. Infection and Immunity. 70: 2926-32. PMID 12010981 DOI: 10.1128/IAI.70.6.2926-2932.2002  0.84
2002 Ficarro SB, McCleland ML, Stukenberg PT, Burke DJ, Ross MM, Shabanowitz J, Hunt DF, White FM. Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae. Nature Biotechnology. 20: 301-5. PMID 11875433 DOI: 10.1038/nbt0302-301  0.84
2002 Strahl BD, Grant PA, Briggs SD, Sun ZW, Bone JR, Caldwell JA, Mollah S, Cook RG, Shabanowitz J, Hunt DF, Allis CD. Set2 is a nucleosomal histone H3-selective methyltransferase that mediates transcriptional repression. Molecular and Cellular Biology. 22: 1298-306. PMID 11839797 DOI: 10.1128/MCB.22.5.1298-1306.2002  0.84
2002 Hanss B, Leal-Pinto E, Teixeira A, Christian RE, Shabanowitz J, Hunt DF, Klotman PE. Cytosolic malate dehydrogenase confers selectivity of the nucleic acid-conducting channel. Proceedings of the National Academy of Sciences of the United States of America. 99: 1707-12. PMID 11805283 DOI: 10.1073/pnas.022355499  0.84
2002 Carson JP, Behnam M, Sutton JN, Du C, Wang X, Hunt DF, Weber MJ, Kulik G. Smac is required for cytochrome c-induced apoptosis in prostate cancer LNCaP cells. Cancer Research. 62: 18-23. PMID 11782351  0.84
2002 Mosammaparast N, Guo Y, Shabanowitz J, Hunt DF, Pemberton LF. Pathways mediating the nuclear import of histones H3 and H4 in yeast. The Journal of Biological Chemistry. 277: 862-8. PMID 11694505 DOI: 10.1074/jbc.M106845200  0.84
2002 Evans AM, Zarling AL, Ficarro SB, Shabanowitz J, Engelhard VH, Hunt DF. Differential comparison of phosphorylated MHC class I HLA-A2.1 Peptides from three different cancer cell lines Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 27-28.  0.84
2002 Syka JEP, Bai DL, Stafford GC, Horning S, Shabanowitz J, Hunt DF, Marto JA. A linear quadrupole ion trap Fourier transform mass spectrometer: Performance characterization and applications to proteomics Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 129-130.  0.84
2002 Mollah S, Ueberheide B, Busby S, Moran R, Barber CM, Shabanowitz J, Allis CD, Hunt DF. New approach to mapping of post-translational modifications of histones Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 331-332.  0.84
2002 Guo Y, Cheong YH, Shabanowitz J, Luan S, Hunt DF. Phosphoproteome analysis of arabidopsis thaliana Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 67-68.  0.84
2002 Barrett-Wilt GA, Lan W, High AA, Shabanowitz J, Hunt DF, Stukenberg PT. Binding partners of the Aurora B mitotic kinase in xenopus laevis oocytes Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 125-126.  0.84
2002 Yang F, Soupene E, Kustu S, Shabanowitz J, Hunt DF. Novel methods to identify E.coli membrane using nano-HPLC micro-ESI mass spectrometry Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 229-230.  0.84
2002 Platt MD, Baginsky S, Gruissem W, Shabanowitz J, Hunt DF. Exploration of the chloroplast proteome in arabidopsis thaliana Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 135-136.  0.84
2002 Sutton JN, Seamons A, Beeson C, Kafsack B, Goverman J, Shabanowitz J, Hunt DF. Differential display of MBP class II MHC peptides by FT-ICR MS using a novel differential computer program Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 141-142.  0.84
2001 Kao H, Marto JA, Hoffmann TK, Shabanowitz J, Finkelstein SD, Whiteside TL, Hunt DF, Finn OJ. Identification of cyclin B1 as a shared human epithelial tumor-associated antigen recognized by T cells. The Journal of Experimental Medicine. 194: 1313-23. PMID 11696596 DOI: 10.1084/jem.194.9.1313  0.84
2001 Baginsky S, Shteiman-Kotler A, Liveanu V, Yehudai-Resheff S, Bellaoui M, Settlage RE, Shabanowitz J, Hunt DF, Schuster G, Gruissem W. Chloroplast PNPase exists as a homo-multimer enzyme complex that is distinct from the Escherichia coli degradosome. Rna (New York, N.Y.). 7: 1464-75. PMID 11680851  0.84
2001 Harnpicharnchai P, Jakovljevic J, Horsey E, Miles T, Roman J, Rout M, Meagher D, Imai B, Guo Y, Brame CJ, Shabanowitz J, Hunt DF, Woolford JL. Composition and functional characterization of yeast 66S ribosome assembly intermediates. Molecular Cell. 8: 505-15. PMID 11583614 DOI: 10.1016/S1097-2765(01)00344-6  0.84
2001 Pierce RA, Field ED, Mutis T, Golovina TN, Von Kap-Herr C, Wilke M, Pool J, Shabanowitz J, Pettenati MJ, Eisenlohr LC, Hunt DF, Goulmy E, Engelhard VH. The HA-2 minor histocompatibility antigen is derived from a diallelic gene encoding a novel human class I myosin protein. Journal of Immunology (Baltimore, Md. : 1950). 167: 3223-30. PMID 11544309  0.84
2001 Luckey CJ, Marto JA, Partridge M, Hall E, White FM, Lippolis JD, Shabanowitz J, Hunt DF, Engelhard VH. Differences in the expression of human class I MHC alleles and their associated peptides in the presence of proteasome inhibitors. Journal of Immunology (Baltimore, Md. : 1950). 167: 1212-21. PMID 11466336  0.84
2001 Strahl BD, Briggs SD, Brame CJ, Caldwell JA, Koh SS, Ma H, Cook RG, Shabanowitz J, Hunt DF, Stallcup MR, Allis CD. Methylation of histone H4 at arginine 3 occurs in vivo and is mediated by the nuclear receptor coactivator PRMT1. Current Biology : Cb. 11: 996-1000. PMID 11448779 DOI: 10.1016/S0960-9822(01)00294-9  0.84
2001 Mosammaparast N, Jackson KR, Guo Y, Brame CJ, Shabanowitz J, Hunt DF, Pemberton LF. Nuclear import of histone H2A and H2B is mediated by a network of karyopherins. The Journal of Cell Biology. 153: 251-62. PMID 11309407 DOI: 10.1083/jcb.153.2.251  0.84
2001 Yamshchikov G, Thompson L, Ross WG, Galavotti H, Aquila W, Deacon D, Caldwell J, Patterson JW, Hunt DF, Slingluff CL. Analysis of a natural immune response against tumor antigens in a melanoma survivor: lessons applicable to clinical trial evaluations. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 7: 909s-916s. PMID 11300491  0.84
2001 Guimezanes A, Barrett-Wilt GA, Gulden-Thompson P, Shabanowitz J, Engelhard VH, Hunt DF, Schmitt-Verhulst AM, Engelhardt VH. Identification of endogenous peptides recognized by in vivo or in vitro generated alloreactive cytotoxic T lymphocytes: distinct characteristics correlated with CD8 dependence. European Journal of Immunology. 31: 421-32. PMID 11180106 DOI: 10.1002/1521-4141(200102)31:2<421::AID-IMMU421>3.0.CO;2-4  0.84
2001 Nepom GT, Lippolis JD, White FM, Masewicz S, Marto JA, Herman A, Luckey CJ, Falk B, Shabanowitz J, Hunt DF, Engelhard VH, Nepom BS. Identification and modulation of a naturally processed T cell epitope from the diabetes-associated autoantigen human glutamic acid decarboxylase 65 (hGAD65). Proceedings of the National Academy of Sciences of the United States of America. 98: 1763-8. PMID 11172025 DOI: 10.1073/pnas.98.4.1763  0.84
2001 Brickner AG, Warren EH, Caldwell JA, Akatsuka Y, Golovina TN, Zarling AL, Shabanowitz J, Eisenlohr LC, Hunt DF, Engelhard VH, Riddell SR. The immunogenicity of a new human minor histocompatibility antigen results from differential antigen processing. The Journal of Experimental Medicine. 193: 195-206. PMID 11148223 DOI: 10.1084/jem.193.2.195  0.84
2000 Zarling AL, Ficarro SB, White FM, Shabanowitz J, Hunt DF, Engelhard VH. Phosphorylated peptides are naturally processed and presented by major histocompatibility complex class I molecules in vivo. The Journal of Experimental Medicine. 192: 1755-62. PMID 11120772 DOI: 10.1084/jem.192.12.1755  0.84
2000 Pestic-Dragovich L, Stojiljkovic L, Philimonenko AA, Nowak G, Ke Y, Settlage RE, Shabanowitz J, Hunt DF, Hozak P, de Lanerolle P. A myosin I isoform in the nucleus. Science (New York, N.Y.). 290: 337-41. PMID 11030652 DOI: 10.1126/science.290.5490.337  0.84
2000 Martin SE, Shabanowitz J, Hunt DF, Marto JA. Subfemtomole MS and MS/MS peptide sequence analysis using nano-HPLC micro-ESI fourier transform ion cyclotron resonance mass spectrometry. Analytical Chemistry. 72: 4266-74. PMID 11008759  0.84
2000 Gimenez-Bonafé P, Laszczak M, Kasinsky HE, Lemke MJ, Lewis JD, Iskandar M, He T, Ikonomou MG, White FM, Hunt DF, Chiva M, Ausió J. Characterization and evolutionary relevance of the sperm nuclear basic proteins from stickleback fish. Molecular Reproduction and Development. 57: 185-93. PMID 10984419 DOI: 10.1002/1098-2795(200010)57:2<185::AID-MRD10>3.0.CO;2-5  0.84
2000 Lim KB, Walker CR, Guo L, Pellett S, Shabanowitz J, Hunt DF, Hewlett EL, Ludwig A, Goebel W, Welch RA, Hackett M. Escherichia coli alpha-hemolysin (HlyA) is heterogeneously acylated in vivo with 14-, 15-, and 17-carbon fatty acids. The Journal of Biological Chemistry. 275: 36698-702. PMID 10978310 DOI: 10.1074/jbc.C000544200  0.84
2000 Hsu JY, Sun ZW, Li X, Reuben M, Tatchell K, Bishop DK, Grushcow JM, Brame CJ, Caldwell JA, Hunt DF, Lin R, Smith MM, Allis CD. Mitotic phosphorylation of histone H3 is governed by Ipl1/aurora kinase and Glc7/PP1 phosphatase in budding yeast and nematodes. Cell. 102: 279-91. PMID 10975519  0.84
2000 Huberman A, Aguilar MB, Navarro-Quiroga I, Ramos L, Fernandez I, White FM, Hunt DF. Corrigendum to 'A hyperglycemic peptide hormone from the caribbean shrimp penaeus (litopenaeus) schmitti'*(1) Peptides. 21: 753. PMID 10876060  0.4
2000 Crotzer VL, Christian RE, Brooks JM, Shabanowitz J, Settlage RE, Marto JA, White FM, Rickinson AB, Hunt DF, Engelhard VH. Immunodominance among EBV-derived epitopes restricted by HLA-B27 does not correlate with epitope abundance in EBV-transformed B-lymphoblastoid cell lines. Journal of Immunology (Baltimore, Md. : 1950). 164: 6120-9. PMID 10843661  0.84
2000 Huberman A, Aguilar MB, Navarro-Quiroga I, Ramos L, Fernández I, White FM, Hunt DF, Shabanowitz J. A hyperglycemic peptide hormone from the Caribbean shrimp Penaeus (litopenaeus) schmitti. Peptides. 21: 331-8. PMID 10793213 DOI: 10.1016/S0196-9781(00)00155-8  0.84
2000 Celli S, Marto JA, Falchetto R, Shabanowitz J, Valdivia LA, Fung JJ, Hunt DF, Kelly RH. Serum protein immunogenicity: implications for liver xenografting. Electrophoresis. 21: 965-75. PMID 10768783 DOI: 10.1002/(SICI)1522-2683(20000301)21:5<965::AID-ELPS965>3.0.CO;2-D  0.84
2000 Slingluff CL, Colella TA, Thompson L, Graham DD, Skipper JC, Caldwell J, Brinckerhoff L, Kittlesen DJ, Deacon DH, Oei C, Harthun NL, Huczko EL, Hunt DF, Darrow TL, Engelhard VH. Melanomas with concordant loss of multiple melanocytic differentiation proteins: immune escape that may be overcome by targeting unique or undefined antigens. Cancer Immunology, Immunotherapy : Cii. 48: 661-72. PMID 10752474  0.84
2000 Turner TT, Riley TA, Vagnetti M, Flickinger CJ, Caldwell JA, Hunt DF. Postvasectomy alterations in protein synthesis and secretion in the rat caput epididymidis are not repaired after vasovasostomy. Journal of Andrology. 21: 276-90. PMID 10714823  0.84
2000 High A, Hunt DF, Kupfer GM. Mass spectroscopic detection of fanconi anemia binding proteins Blood. 96: 12b.  0.84
1999 Pierce RA, Field ED, den Haan JM, Caldwell JA, White FM, Marto JA, Wang W, Frost LM, Blokland E, Reinhardus C, Shabanowitz J, Hunt DF, Goulmy E, Engelhard VH. Cutting edge: the HLA-A*0101-restricted HY minor histocompatibility antigen originates from DFFRY and contains a cysteinylated cysteine residue as identified by a novel mass spectrometric technique. Journal of Immunology (Baltimore, Md. : 1950). 163: 6360-4. PMID 10586024  0.84
1999 Skipper JC, Gulden PH, Hendrickson RC, Harthun N, Caldwell JA, Shabanowitz J, Engelhard VH, Hunt DF, Slingluff CL. Mass-spectrometric evaluation of HLA-A*0201-associated peptides identifies dominant naturally processed forms of CTL epitopes from MART-1 and gp100. International Journal of Cancer. Journal International Du Cancer. 82: 669-77. PMID 10417764 DOI: 10.1002/(SICI)1097-0215(19990827)82:5<669::AID-IJC9>3.0.CO;2-#  0.84
1999 Osterlund T, Beussman DJ, Julenius K, Poon PH, Linse S, Shabanowitz J, Hunt DF, Schotz MC, Derewenda ZS, Holm C. Domain identification of hormone-sensitive lipase by circular dichroism and fluorescence spectroscopy, limited proteolysis, and mass spectrometry. The Journal of Biological Chemistry. 274: 15382-8. PMID 10336425 DOI: 10.1074/jbc.274.22.15382  0.84
1999 Furuya K, Hackett M, Cirelli MA, Schegg KM, Wang H, Shabanowitz J, Hunt DF, Schooley DA. A cardioactive peptide from the southern armyworm, Spodoptera eridania. Peptides. 20: 53-61. PMID 10098624 DOI: 10.1016/S0196-9781(98)00148-X  0.84
1999 Pieper R, Christian RE, Gonzales MI, Nishimura MI, Gupta G, Settlage RE, Shabanowitz J, Rosenberg SA, Hunt DF, Topalian SL. Biochemical identification of a mutated human melanoma antigen recognized by CD4(+) T cells. The Journal of Experimental Medicine. 189: 757-66. PMID 10049939  0.84
1998 Hogan KT, Eisinger DP, Cupp SB, Lekstrom KJ, Deacon DD, Shabanowitz J, Hunt DF, Engelhard VH, Slingluff CL, Ross MM. The peptide recognized by HLA-A68.2-restricted, squamous cell carcinoma of the lung-specific cytotoxic T lymphocytes is derived from a mutated elongation factor 2 gene. Cancer Research. 58: 5144-50. PMID 9823325  0.84
1998 Luckey CJ, King GM, Marto JA, Venketeswaran S, Maier BF, Crotzer VL, Colella TA, Shabanowitz J, Hunt DF, Engelhard VH. Proteasomes can either generate or destroy MHC class I epitopes: evidence for nonproteasomal epitope generation in the cytosol. Journal of Immunology (Baltimore, Md. : 1950). 161: 112-21. PMID 9647214  0.84
1998 Wang W, Man S, Gulden PH, Hunt DF, Engelhard VH. Class I-restricted alloreactive cytotoxic T lymphocytes recognize a complex array of specific MHC-associated peptides. Journal of Immunology (Baltimore, Md. : 1950). 160: 1091-7. PMID 9570521  0.84
1998 Kittlesen DJ, Thompson LW, Gulden PH, Skipper JC, Colella TA, Shabanowitz J, Hunt DF, Engelhard VH, Slingluff CL, Shabanowitz JA. Human melanoma patients recognize an HLA-A1-restricted CTL epitope from tyrosinase containing two cysteine residues: implications for tumor vaccine development. Journal of Immunology (Baltimore, Md. : 1950). 160: 2099-106. PMID 9498746  0.84
1998 den Haan JM, Meadows LM, Wang W, Pool J, Blokland E, Bishop TL, Reinhardus C, Shabanowitz J, Offringa R, Hunt DF, Engelhard VH, Goulmy E. The minor histocompatibility antigen HA-1: a diallelic gene with a single amino acid polymorphism. Science (New York, N.Y.). 279: 1054-7. PMID 9461441 DOI: 10.1126/science.279.5353.1054  0.84
1998 Mosse CA, Meadows L, Luckey CJ, Kittlesen DJ, Huczko EL, Slingluff CL, Shabanowitz J, Hunt DF, Engelhard VH. The class I antigen-processing pathway for the membrane protein tyrosinase involves translation in the endoplasmic reticulum and processing in the cytosol. The Journal of Experimental Medicine. 187: 37-48. PMID 9419209 DOI: 10.1084/jem.187.1.37  0.84
1997 Chinni SR, Falchetto R, Gercel-Taylor C, Shabanowitz J, Hunt DF, Taylor DD. Humoral immune responses to cathepsin D and glucose-regulated protein 78 in ovarian cancer patients. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 3: 1557-64. PMID 9815843  0.84
1997 Revett SP, King G, Shabanowitz J, Hunt DF, Hartman KL, Laue TM, Nelson DJ. Characterization of a helix-loop-helix (EF hand) motif of silver hake parvalbumin isoform B. Protein Science : a Publication of the Protein Society. 6: 2397-408. PMID 9385642 DOI: 10.1002/pro.5560061113  0.84
1997 Hu Q, Bazemore Walker CR, Girao C, Opferman JT, Sun J, Shabanowitz J, Hunt DF, Ashton-Rickardt PG. Specific recognition of thymic self-peptides induces the positive selection of cytotoxic T lymphocytes. Immunity. 7: 221-31. PMID 9285407  0.84
1997 Polanowska-Grabowska R, Simon CG, Falchetto R, Shabanowitz J, Hunt DF, Gear AR. Platelet adhesion to collagen under flow causes dissociation of a phosphoprotein complex of heat-shock proteins and protein phosphatase 1. Blood. 90: 1516-26. PMID 9269769  0.84
1997 Wang W, Gulden PH, Pierce RA, Shabanowitz J, Man ST, Hunt DF, Engelhard VH, Shabanowitz JA. A naturally processed peptide presented by HLA-A*0201 is expressed at low abundance and recognized by an alloreactive CD8+ cytotoxic T cell with apparent high affinity. Journal of Immunology (Baltimore, Md. : 1950). 158: 5797-804. PMID 9190931  0.84
1997 Hungerford JE, Hoeffler JP, Bowers CW, Dahm LM, Falchetto R, Shabanowitz J, Hunt DF, Little CD. Identification of a novel marker for primordial smooth muscle and its differential expression pattern in contractile vs noncontractile cells. The Journal of Cell Biology. 137: 925-37. PMID 9151694 DOI: 10.1083/jcb.137.4.925  0.84
1997 Laney EL, Shabanowitz J, King G, Hunt DF, Nelson DJ. The isolation of parvalbumin isoforms from the tail muscle of the American alligator (Alligator mississipiensis). Journal of Inorganic Biochemistry. 66: 67-76. PMID 9076974 DOI: 10.1016/S0162-0134(96)00187-0  0.84
1997 Meadows L, Wang W, den Haan JM, Blokland E, Reinhardus C, Drijfhout JW, Shabanowitz J, Pierce R, Agulnik AI, Bishop CE, Hunt DF, Goulmy E, Engelhard VH. The HLA-A*0201-restricted H-Y antigen contains a posttranslationally modified cysteine that significantly affects T cell recognition. Immunity. 6: 273-81. PMID 9075928 DOI: 10.1016/S1074-7613(00)80330-1  0.84
1997 Fiorillo MT, Meadows L, D'Amato M, Shabanowitz J, Hunt DF, Appella E, Sorrentino R. Susceptibility to ankylosing spondylitis correlates with the C-terminal residue of peptides presented by various HLA-B27 subtypes. European Journal of Immunology. 27: 368-73. PMID 9045906 DOI: 10.1002/eji.1830270205  0.84
1997 Dubey P, Hendrickson RC, Meredith SC, Siegel CT, Shabanowitz J, Skipper JC, Engelhard VH, Hunt DF, Schreiber H. The immunodominant antigen of an ultraviolet-induced regressor tumor is generated by a somatic point mutation in the DEAD box helicase p68. The Journal of Experimental Medicine. 185: 695-705. PMID 9034148 DOI: 10.1084/jem.185.4.695  0.84
1996 Skipper JC, Kittlesen DJ, Hendrickson RC, Deacon DD, Harthun NL, Wagner SN, Hunt DF, Engelhard VH, Slingluff CL. Shared epitopes for HLA-A3-restricted melanoma-reactive human CTL include a naturally processed epitope from Pmel-17/gp100. Journal of Immunology (Baltimore, Md. : 1950). 157: 5027-33. PMID 8943411  0.84
1996 den Haan JM, Bontrop RE, Pool J, Sherman N, Blokland E, Engelhard VH, Hunt DF, Goulmy E. Conservation of minor histocompatibility antigens between human and non-human primates. European Journal of Immunology. 26: 2680-5. PMID 8921955 DOI: 10.1002/eji.1830261120  0.84
1996 Hunt JG, Kasinsky HE, Elsey RM, Wright CL, Rice P, Bell JE, Sharp DJ, Kiss AJ, Hunt DF, Arnott DP, Russ MM, Shabanowitz J, Ausió J. Protamines of reptiles. The Journal of Biological Chemistry. 271: 23547-57. PMID 8798564  0.84
1996 Gulden PH, Fischer P, Sherman NE, Wang W, Engelhard VH, Shabanowitz J, Hunt DF, Pamer EG. A Listeria monocytogenes pentapeptide is presented to cytolytic T lymphocytes by the H2-M3 MHC class Ib molecule. Immunity. 5: 73-9. PMID 8758896 DOI: 10.1016/S1074-7613(00)80311-8  0.84
1996 Janssen I, Schoofs L, Spittaels K, Neven H, Vanden Broeck J, Devreese B, Van Beeumen J, Shabanowitz J, Hunt DF, De Loof A. Isolation of NEB-LFamide, a novel myotropic neuropeptide from the grey fleshfly. Molecular and Cellular Endocrinology. 117: 157-65. PMID 8737375 DOI: 10.1016/0303-7207(95)03746-2  0.84
1996 Niedermann G, King G, Butz S, Birsner U, Grimm R, Shabanowitz J, Hunt DF, Eichmann K. The proteolytic fragments generated by vertebrate proteasomes: structural relationships to major histocompatibility complex class I binding peptides. Proceedings of the National Academy of Sciences of the United States of America. 93: 8572-7. PMID 8710912 DOI: 10.1073/pnas.93.16.8572  0.84
1996 di Marzo Veronese F, Arnott D, Barnaba V, Loftus DJ, Sakaguchi K, Thompson CB, Salemi S, Mastroianni C, Sette A, Shabanowitz J, Hunt DF, Appella E. Autoreactive cytotoxic T lymphocytes in human immunodeficiency virus type 1-infected subjects. The Journal of Experimental Medicine. 183: 2509-16. PMID 8676071 DOI: 10.1084/jem.183.6.2509  0.84
1985 Hunt DF, Shabanowitz J, Yates JR, MeIver RT, Hunter RL, Syka JE, Amy J. Tandem quadrupole-Fourier transform mass spectrometry of oligopeptides. Analytical Chemistry. 57: 2728-33. PMID 4073518  0.84
1985 Hunt DF, Shabanowitz J, McIver RT, Hunter RL, Syka JE. Ionization and mass analysis of nonvolatile compounds by particle bombardment tandem-quadrupole Fourier transform mass spectrometry. Analytical Chemistry. 57: 765-8. PMID 3993950  0.84
1969 Lingappa BT, Prasad M, Lingappa Y, Hunt DF, Biemann K. Phenethyl alcohol and tryptophol: autoantibiotics produced by the fungus Candida albicans. Science (New York, N.Y.). 163: 192-4. PMID 5762768  0.48
1968 Hunt DF, Hignite CE, Biemann K. Structure elucidation of dinucleotides by mass spectrometry. Biochemical and Biophysical Research Communications. 33: 378-83. PMID 5722228  0.48
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