Rigoberto Rios-Estepa, Ph.D. - Publications

Affiliations: 
2008 Washington State University, Pullman, WA, United States 
Area:
Chemical Engineering

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Ramirez-Malule H, López-Agudelo VA, Gómez-Ríos D, Ochoa S, Ríos-Estepa R, Junne S, Neubauer P. TCA Cycle and Its Relationship with Clavulanic Acid Production: A Further Interpretation by Using a Reduced Genome-Scale Metabolic Model of . Bioengineering (Basel, Switzerland). 8. PMID 34436106 DOI: 10.3390/bioengineering8080103  0.399
2020 Correa SM, Alseekh S, Atehortúa L, Brotman Y, Ríos-Estepa R, Fernie AR, Nikoloski Z. Model-assisted identification of metabolic engineering strategies for Jatropha curcas lipid pathways. The Plant Journal : For Cell and Molecular Biology. PMID 33001507 DOI: 10.1111/Tpj.14906  0.388
2020 López-Agudelo VA, Mendum TA, Laing E, Wu H, Baena A, Barrera LF, Beste DJV, Rios-Estepa R. A systematic evaluation of Mycobacterium tuberculosis Genome-Scale Metabolic Networks. Plos Computational Biology. 16: e1007533. PMID 32542021 DOI: 10.1371/Journal.Pcbi.1007533  0.452
2019 Gómez-Ríos D, Junne S, Neubauer P, Ochoa S, Ríos-Estepa R, Ramírez-Malule H. Characterization of the Metabolic Response of to Shear Stress in Stirred Tanks and Single-Use 2D Rocking Motion Bioreactors for Clavulanic Acid Production. Antibiotics (Basel, Switzerland). 8. PMID 31569725 DOI: 10.3390/Antibiotics8040168  0.347
2019 Gómez-Ríos D, Navarro G, Monsalve P, Barrera-Zapata R, Ríos-Estepa R. Aspen Plus Simulation Strategies Applied to the Study of Chitin Bioextraction from Shrimp Waste. Food Technology and Biotechnology. 57: 238-248. PMID 31537973 DOI: 10.17113/Ftb.57.02.19.6003  0.331
2019 Gómez-Ríos D, Ramírez-Malule H, Neubauer P, Junne S, Ríos-Estepa R. Data of clavulanic acid and clavulanate-imidazole stability at low temperatures. Data in Brief. 23: 103775. PMID 31372423 DOI: 10.1016/J.Dib.2019.103775  0.334
2019 Pinilla L, Toro LF, Laing E, Alzate JF, Ríos-Estepa R. Comparative Transcriptome Analysis of in Response to Favorable and Restrictive Nutritional Conditions. Antibiotics (Basel, Switzerland). 8. PMID 31330947 DOI: 10.3390/Antibiotics8030096  0.409
2019 Gómez-Ríos D, Ramírez-Malule H, Neubauer P, Junne S, Ríos-Estepa R. Degradation Kinetics of Clavulanic Acid in Fermentation Broths at Low Temperatures. Antibiotics (Basel, Switzerland). 8. PMID 30658482 DOI: 10.3390/Antibiotics8010006  0.344
2018 Ramirez-Malule H, Junne S, Nicolás Cruz-Bournazou M, Neubauer P, Ríos-Estepa R. Streptomyces clavuligerus shows a strong association between TCA cycle intermediate accumulation and clavulanic acid biosynthesis. Applied Microbiology and Biotechnology. PMID 29523936 DOI: 10.1007/S00253-018-8841-8  0.467
2018 Toro L, Pinilla L, Avignone-Rossa C, Ríos-Estepa R. An enhanced genome-scale metabolic reconstruction of Streptomyces clavuligerus identifies novel strain improvement strategies. Bioprocess and Biosystems Engineering. PMID 29404683 DOI: 10.1007/S00449-018-1900-9  0.437
2018 Pinilla L, Toro LF, Avignone-Rossa C, Peñuela M, Rios-Estepa R. Streptomyces clavuligerus strain selection for clavulanic acid biosynthesis: a study based on culture composition effects and statistical analysis Dyna. 85: 111-118. DOI: 10.15446/Dyna.V85N205.69560  0.322
2017 López-Agudelo VA, Baena A, Ramirez-Malule H, Ochoa S, Barrera LF, Ríos-Estepa R. Metabolic adaptation of two in silico mutants of Mycobacterium tuberculosis during infection. Bmc Systems Biology. 11: 107. PMID 29157227 DOI: 10.1186/S12918-017-0496-Z  0.386
2016 Ramirez-Malule H, Restrepo A, Cardona W, Junne S, Neubauer P, Rios-Estepa R. Inversion of the stereochemical configuration (3S, 5S)-clavaminic acid into (3R, 5R)-clavulanic acid: A computationally-assisted approach based on experimental evidence. Journal of Theoretical Biology. 395: 40-50. PMID 26835563 DOI: 10.1016/J.Jtbi.2016.01.028  0.34
2016 Ramirez-Malule H, Junne S, López C, Zapata J, Sáez A, Neubauer P, Rios-Estepa R. An improved HPLC-DAD method for clavulanic acid quantification in fermentation broths of Streptomyces clavuligerus. Journal of Pharmaceutical and Biomedical Analysis. 120: 241-7. PMID 26760242 DOI: 10.1016/J.Jpba.2015.12.035  0.32
2014 Lange BM, Rios-Estepa R. Kinetic modeling of plant metabolism and its predictive power: peppermint essential oil biosynthesis as an example. Methods in Molecular Biology (Clifton, N.J.). 1083: 287-311. PMID 24218222 DOI: 10.1007/978-1-62703-661-0_17  0.619
2010 Rios-Estepa R, Lange I, Lee JM, Lange BM. Mathematical modeling-guided evaluation of biochemical, developmental, environmental, and genotypic determinants of essential oil composition and yield in peppermint leaves. Plant Physiology. 152: 2105-19. PMID 20147490 DOI: 10.1104/Pp.109.152256  0.55
2008 Rios-Estepa R, Turner GW, Lee JM, Croteau RB, Lange BM. A systems biology approach identifies the biochemical mechanisms regulating monoterpenoid essential oil composition in peppermint. Proceedings of the National Academy of Sciences of the United States of America. 105: 2818-23. PMID 18287058 DOI: 10.1073/Pnas.0712314105  0.608
2007 Rios-Estepa R, Lange BM. Experimental and mathematical approaches to modeling plant metabolic networks. Phytochemistry. 68: 2351-74. PMID 17561179 DOI: 10.1016/J.Phytochem.2007.04.021  0.573
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