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Andrew Feinberg - Publications

Affiliations: 
Johns Hopkins University, Baltimore, MD 
Area:
Biochemistry, Molecular Biology
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Year Citation  Score
2023 Feinberg JI, Schrott R, Ladd-Acosta C, Newschaffer CJ, Hertz-Picciotto I, Croen LA, Daniele Fallin M, Feinberg AP, Volk HE. Epigenetic changes in sperm are associated with paternal and child quantitative autistic traits in an autism-enriched cohort. Molecular Psychiatry. PMID 37100868 DOI: 10.1038/s41380-023-02046-7  0.644
2023 Fang Y, Ji Z, Zhou W, Abante J, Koldobskiy MA, Ji H, Feinberg AP. DNA methylation entropy is associated with DNA sequence features and developmental epigenetic divergence. Nucleic Acids Research. PMID 36762477 DOI: 10.1093/nar/gkad050  0.356
2021 Bakulski KM, Dou JF, Feinberg JI, Aung MT, Ladd-Acosta C, Volk HE, Newschaffer CJ, Croen LA, Hertz-Picciotto I, Levy SE, Landa R, Feinberg AP, Fallin MD. Autism-Associated DNA Methylation at Birth From Multiple Tissues Is Enriched for Autism Genes in the Early Autism Risk Longitudinal Investigation. Frontiers in Molecular Neuroscience. 14: 775390. PMID 34899183 DOI: 10.3389/fnmol.2021.775390  0.662
2021 Koldobskiy MA, Jenkinson G, Abante J, Rodriguez DiBlasi VA, Zhou W, Pujadas E, Idrizi A, Tryggvadottir R, Callahan C, Bonifant CL, Rabin KR, Brown PA, Ji H, Goutsias J, Feinberg AP. Converging genetic and epigenetic drivers of paediatric acute lymphoblastic leukaemia identified by an information-theoretic analysis. Nature Biomedical Engineering. 5: 360-376. PMID 33859388 DOI: 10.1038/s41551-021-00703-2  0.374
2020 Koldobskiy MA, Abante J, Jenkinson G, Pujadas E, Tetens A, Zhao F, Tryggvadottir R, Idrizi A, Reinisch A, Majeti R, Goutsias J, Feinberg AP. A Dysregulated DNA Methylation Landscape Linked to Gene Expression in MLL-Rearranged AML. Epigenetics. 1-18. PMID 32114880 DOI: 10.1080/15592294.2020.1734149  0.387
2019 Küpers LK, Monnereau C, Sharp GC, Yousefi P, Salas LA, Ghantous A, Page CM, Reese SE, Wilcox AJ, Czamara D, Starling AP, Novoloaca A, Lent S, Roy R, Hoyo C, ... ... Feinberg AP, et al. Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight. Nature Communications. 10: 1893. PMID 31015461 DOI: 10.1038/S41467-019-09671-3  0.313
2019 Jenkinson G, Abante J, Koldobskiy MA, Feinberg AP, Goutsias J. Ranking genomic features using an information-theoretic measure of epigenetic discordance. Bmc Bioinformatics. 20: 175. PMID 30961526 DOI: 10.1186/S12859-019-2777-6  0.346
2019 Ladd-Acosta C, Feinberg JI, Brown SC, Lurmann FW, Croen LA, Hertz-Picciotto I, Newschaffer CJ, Feinberg AP, Fallin MD, Volk HE. Epigenetic marks of prenatal air pollution exposure found in multiple tissues relevant for child health. Environment International. 126: 363-376. PMID 30826615 DOI: 10.1016/J.Envint.2019.02.028  0.621
2018 Andrews SV, Sheppard B, Windham GC, Schieve LA, Schendel DE, Croen LA, Chopra P, Alisch RS, Newschaffer CJ, Warren ST, Feinberg AP, Fallin MD, Ladd-Acosta C. Case-control meta-analysis of blood DNA methylation and autism spectrum disorder. Molecular Autism. 9: 40. PMID 29988321 DOI: 10.1186/S13229-018-0224-6  0.589
2018 Kular L, Liu Y, Ruhrmann S, Zheleznyakova G, Marabita F, Gomez-Cabrero D, James T, Ewing E, Lindén M, Górnikiewicz B, Aeinehband S, Stridh P, Link J, Andlauer TFM, Gasperi C, ... ... Feinberg AP, et al. DNA methylation as a mediator of HLA-DRB1*15:01 and a protective variant in multiple sclerosis. Nature Communications. 9: 2397. PMID 29921915 DOI: 10.1038/S41467-018-04732-5  0.351
2018 Marabita F, Almgren M, Sjöholm LK, Kular L, Liu Y, James T, Kiss NB, Feinberg AP, Olsson T, Kockum I, Alfredsson L, Ekström TJ, Jagodic M. Author Correction: Smoking induces DNA methylation changes in Multiple Sclerosis patients with exposure-response relationship. Scientific Reports. 8: 4340. PMID 29515171 DOI: 10.1038/S41598-018-22686-Y  0.302
2018 Jenkinson G, Abante J, Feinberg AP, Goutsias J. An information-theoretic approach to the modeling and analysis of whole-genome bisulfite sequencing data. Bmc Bioinformatics. 19: 87. PMID 29514626 DOI: 10.1186/s12859-018-2086-5  0.315
2018 Koldobskiy M, Jenkinson G, Pujadas E, Martin A, Eberhart C, Goutsias J, Raabe E, Feinberg A. DIPG-74. DNA METHYLATION STOCHASTICITY IN DIPG Neuro-Oncology. 20: i64-i64. DOI: 10.1093/Neuonc/Noy059.166  0.391
2017 Marabita F, Almgren M, Sjöholm LK, Kular L, Liu Y, James T, Kiss NB, Feinberg AP, Olsson T, Kockum I, Alfredsson L, Ekström TJ, Jagodic M. Smoking induces DNA methylation changes in Multiple Sclerosis patients with exposure-response relationship. Scientific Reports. 7: 14589. PMID 29109506 DOI: 10.1038/S41598-017-14788-W  0.352
2017 Andrews SV, Ellis SE, Bakulski KM, Sheppard B, Croen LA, Hertz-Picciotto I, Newschaffer CJ, Feinberg AP, Arking DE, Ladd-Acosta C, Fallin MD. Cross-tissue integration of genetic and epigenetic data offers insight into autism spectrum disorder. Nature Communications. 8: 1011. PMID 29066808 DOI: 10.1038/S41467-017-00868-Y  0.618
2017 McDonald OG, Li X, Saunders T, Tryggvadottir R, Mentch SJ, Warmoes MO, Word AE, Carrer A, Salz TH, Natsume S, Stauffer KM, Makohon-Moore A, Zhong Y, Wu H, Wellen KE, ... ... Feinberg AP, et al. Epigenomic reprogramming during pancreatic cancer progression links anabolic glucose metabolism to distant metastasis. Nature Genetics. PMID 28092686 DOI: 10.1038/Ng.3753  0.342
2016 Andrews SV, Ladd-Acosta C, Feinberg AP, Hansen KD, Fallin MD. "Gap hunting" to characterize clustered probe signals in Illumina methylation array data. Epigenetics & Chromatin. 9: 56. PMID 27980682 DOI: 10.1186/S13072-016-0107-Z  0.615
2016 Li X, Liu Y, Salz T, Hansen KD, Feinberg AP. Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver. Genome Research. PMID 27737935 DOI: 10.1101/Gr.211854.116  0.517
2016 Joubert BR, Felix JF, Yousefi P, Bakulski KM, Just AC, Breton C, Reese SE, Markunas CA, Richmond RC, Xu CJ, Küpers LK, Oh SS, Hoyo C, Gruzieva O, Söderhäll C, ... ... Feinberg AP, et al. DNA Methylation in Newborns and Maternal Smoking in Pregnancy: Genome-wide Consortium Meta-analysis. American Journal of Human Genetics. PMID 27040690 DOI: 10.1016/J.Ajhg.2016.02.019  0.651
2015 Vandiver AR, Idrizi A, Rizzardi L, Feinberg AP, Hansen KD. DNA methylation is stable during replication and cell cycle arrest. Scientific Reports. 5: 17911. PMID 26648411 DOI: 10.1038/Srep17911  0.303
2015 Ladd-Acosta C, Shu C, Lee BK, Gidaya N, Singer A, Schieve LA, Schendel DE, Jones N, Daniels JL, Windham GC, Newschaffer CJ, Croen LA, Feinberg AP, Daniele Fallin M. Presence of an epigenetic signature of prenatal cigarette smoke exposure in childhood. Environmental Research. 144: 139-148. PMID 26610292 DOI: 10.1016/J.Envres.2015.11.014  0.571
2015 Jung N, Dai B, Gentles AJ, Majeti R, Feinberg AP. An LSC epigenetic signature is largely mutation independent and implicates the HOXA cluster in AML pathogenesis. Nature Communications. 6: 8489. PMID 26444494 DOI: 10.1038/Ncomms9489  0.332
2015 Feinberg JI, Bakulski KM, Jaffe AE, Tryggvadottir R, Brown SC, Goldman LR, Croen LA, Hertz-Picciotto I, Newschaffer CJ, Daniele Fallin M, Feinberg AP. Paternal sperm DNA methylation associated with early signs of autism risk in an autism-enriched cohort. International Journal of Epidemiology. 44: 1199-210. PMID 25878217 DOI: 10.1093/Ije/Dyv028  0.306
2015 Schlaeger TM, Daheron L, Brickler TR, Entwisle S, Chan K, Cianci A, DeVine A, Ettenger A, Fitzgerald K, Godfrey M, Gupta D, McPherson J, Malwadkar P, Gupta M, Bell B, ... ... Feinberg AP, et al. A comparison of non-integrating reprogramming methods. Nature Biotechnology. 33: 58-63. PMID 25437882 DOI: 10.1038/Nbt.3070  0.73
2015 Sinha S, Thomas D, Yu L, Gentles AJ, Jung N, Corces-Zimmerman MR, Chan SM, Reinisch A, Feinberg AP, Dill DL, Majeti R. Mutant WT1 is associated with DNA hypermethylation of PRC2 targets in AML and responds to EZH2 inhibition. Blood. 125: 316-26. PMID 25398938 DOI: 10.1182/Blood-2014-03-566018  0.323
2015 Beerman I, Ziller M, Vandiver A, Gaudin R, Kirchhausen T, Feinberg A, Meissner A, Rossi D. AGE-associated clonal dominance of myeloid-biased HSC is underwritten by unique transcriptional and epigenetic alterations Experimental Hematology. 43: S49. DOI: 10.1016/J.Exphem.2015.06.065  0.342
2014 Timp W, Bravo HC, McDonald OG, Goggins M, Umbricht C, Zeiger M, Feinberg AP, Irizarry RA. Large hypomethylated blocks as a universal defining epigenetic alteration in human solid tumors. Genome Medicine. 6: 61. PMID 25191524 DOI: 10.1186/S13073-014-0061-Y  0.301
2014 Feinberg A. DNA methylation in cancer: three decades of discovery. Genome Medicine. 6: 36. PMID 25031622 DOI: 10.1186/Gm553  0.374
2014 Prusevich P, Kalin JH, Ming SA, Basso M, Givens J, Li X, Hu J, Taylor MS, Cieniewicz AM, Hsiao PY, Huang R, Roberson H, Adejola N, Avery LB, Casero RA, ... ... Feinberg AP, et al. A selective phenelzine analogue inhibitor of histone demethylase LSD1. Acs Chemical Biology. 9: 1284-93. PMID 24707965 DOI: 10.1021/Cb500018S  0.361
2014 Liu Y, Li X, Aryee MJ, Ekström TJ, Padyukov L, Klareskog L, Vandiver A, Moore AZ, Tanaka T, Ferrucci L, Fallin MD, Feinberg AP. GeMes, clusters of DNA methylation under genetic control, can inform genetic and epigenetic analysis of disease. American Journal of Human Genetics. 94: 485-95. PMID 24656863 DOI: 10.1016/J.Ajhg.2014.02.011  0.458
2014 Aryee MJ, Jaffe AE, Corrada-Bravo H, Ladd-Acosta C, Feinberg AP, Hansen KD, Irizarry RA. Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays. Bioinformatics (Oxford, England). 30: 1363-9. PMID 24478339 DOI: 10.1093/Bioinformatics/Btu049  0.624
2014 Hansen KD, Sabunciyan S, Langmead B, Nagy N, Curley R, Klein G, Klein E, Salamon D, Feinberg AP. Large-scale hypomethylated blocks associated with Epstein-Barr virus-induced B-cell immortalization. Genome Research. 24: 177-84. PMID 24068705 DOI: 10.1101/Gr.157743.113  0.304
2014 Ladd-Acosta C, Hansen KD, Briem E, Fallin MD, Kaufmann WE, Feinberg AP. Common DNA methylation alterations in multiple brain regions in autism. Molecular Psychiatry. 19: 862-71. PMID 23999529 DOI: 10.1038/Mp.2013.114  0.653
2014 Jung N, Dai B, Gentles AJ, Murakami P, Majeti R, Feinberg AP. Epigenetic Signature of Leukemia Stem Cells Defines Subgroups Associated with Clinical Outcome and Cell of Origin in AML Blood. 124: 2147-2147. DOI: 10.1182/Blood.V124.21.2147.2147  0.334
2014 Thomas D, Sinha S, Gentles A, Jung N, Feinberg A, Dill D, Majeti R. Wilms' tumor 1 mutation drives DNA hypermethylation in AML and responds to EZH2-inhibitor Experimental Hematology. 42: S62. DOI: 10.1016/J.Exphem.2014.07.237  0.338
2013 Timp W, Feinberg AP. Cancer as a dysregulated epigenome allowing cellular growth advantage at the expense of the host. Nature Reviews. Cancer. 13: 497-510. PMID 23760024 DOI: 10.1038/nrc3486  0.306
2013 Liu Y, Aryee MJ, Padyukov L, Fallin MD, Hesselberg E, Runarsson A, Reinius L, Acevedo N, Taub M, Ronninger M, Shchetynsky K, Scheynius A, Kere J, Alfredsson L, Klareskog L, ... ... Feinberg AP, et al. Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis. Nature Biotechnology. 31: 142-7. PMID 23334450 DOI: 10.1038/Nbt.2487  0.411
2013 Feinberg AP. Epigenetics of Hematopoiesis, Stem Cell Reprogramming, and Cancer Blood. 122: SCI-47-SCI-47. DOI: 10.1182/blood.v122.21.sci-47.sci-47  0.376
2012 Sabunciyan S, Aryee MJ, Irizarry RA, Rongione M, Webster MJ, Kaufman WE, Murakami P, Lessard A, Yolken RH, Feinberg AP, Potash JB. Genome-wide DNA methylation scan in major depressive disorder. Plos One. 7: e34451. PMID 22511943 DOI: 10.1371/Journal.Pone.0034451  0.325
2012 Lee H, Jaffe AE, Feinberg JI, Tryggvadottir R, Brown S, Montano C, Aryee MJ, Irizarry RA, Herbstman J, Witter FR, Goldman LR, Feinberg AP, Fallin MD. DNA methylation shows genome-wide association of NFIX, RAPGEF2 and MSRB3 with gestational age at birth. International Journal of Epidemiology. 41: 188-99. PMID 22422452 DOI: 10.1093/Ije/Dyr237  0.355
2012 Jaffe AE, Feinberg AP, Irizarry RA, Leek JT. Significance analysis and statistical dissection of variably methylated regions. Biostatistics (Oxford, England). 13: 166-78. PMID 21685414 DOI: 10.1093/Biostatistics/Kxr013  0.356
2011 Kim K, Zhao R, Doi A, Ng K, Unternaehrer J, Cahan P, Huo H, Loh YH, Aryee MJ, Lensch MW, Li H, Collins JJ, Feinberg AP, Daley GQ. Donor cell type can influence the epigenome and differentiation potential of human induced pluripotent stem cells. Nature Biotechnology. 29: 1117-9. PMID 22119740 DOI: 10.1038/Nbt.2052  0.776
2011 McDonald OG, Wu H, Timp W, Doi A, Feinberg AP. Genome-scale epigenetic reprogramming during epithelial-to-mesenchymal transition. Nature Structural & Molecular Biology. 18: 867-74. PMID 21725293 DOI: 10.1038/Nsmb.2084  0.781
2011 Hansen KD, Timp W, Bravo HC, Sabunciyan S, Langmead B, McDonald OG, Wen B, Wu H, Liu Y, Diep D, Briem E, Zhang K, Irizarry RA, Feinberg AP. Increased methylation variation in epigenetic domains across cancer types. Nature Genetics. 43: 768-75. PMID 21706001 DOI: 10.1038/Ng.865  0.447
2011 Aryee MJ, Wu Z, Ladd-Acosta C, Herb B, Feinberg AP, Yegnasubramanian S, Irizarry RA. Accurate genome-scale percentage DNA methylation estimates from microarray data. Biostatistics (Oxford, England). 12: 197-210. PMID 20858772 DOI: 10.1093/Biostatistics/Kxq055  0.677
2010 Feinberg AP, Irizarry RA, Fradin D, Aryee MJ, Murakami P, Aspelund T, Eiriksdottir G, Harris TB, Launer L, Gudnason V, Fallin MD. Personalized epigenomic signatures that are stable over time and covary with body mass index. Science Translational Medicine. 2: 49ra67. PMID 20844285 DOI: 10.1126/Scitranslmed.3001262  0.311
2010 Fradin D, Cheslack-Postava K, Ladd-Acosta C, Newschaffer C, Chakravarti A, Arking DE, Feinberg A, Fallin MD. Parent-of-origin effects in autism identified through genome-wide linkage analysis of 16,000 SNPs. Plos One. 5. PMID 20824079 DOI: 10.1371/Journal.Pone.0012513  0.608
2010 Ji H, Ehrlich LI, Seita J, Murakami P, Doi A, Lindau P, Lee H, Aryee MJ, Irizarry RA, Kim K, Rossi DJ, Inlay MA, Serwold T, Karsunky H, Ho L, ... ... Feinberg AP, et al. Comprehensive methylome map of lineage commitment from haematopoietic progenitors. Nature. 467: 338-42. PMID 20720541 DOI: 10.1038/Nature09367  0.795
2010 Kim K, Doi A, Wen B, Ng K, Zhao R, Cahan P, Kim J, Aryee MJ, Ji H, Ehrlich LI, Yabuuchi A, Takeuchi A, Cunniff KC, Hongguang H, McKinney-Freeman S, ... ... Feinberg AP, et al. Epigenetic memory in induced pluripotent stem cells. Nature. 467: 285-90. PMID 20644535 DOI: 10.1038/Nature09342  0.77
2010 Ladd-Acosta C, Aryee MJ, Ordway JM, Feinberg AP. Comprehensive high-throughput arrays for relative methylation (CHARM). Current Protocols in Human Genetics / Editorial Board, Jonathan L. Haines ... [Et Al.]. Unit 20.1.1-19. PMID 20373514 DOI: 10.1002/0471142905.hg2001s65  0.669
2009 Doi A, Park IH, Wen B, Murakami P, Aryee MJ, Irizarry R, Herb B, Ladd-Acosta C, Rho J, Loewer S, Miller J, Schlaeger T, Daley GQ, Feinberg AP. Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts. Nature Genetics. 41: 1350-3. PMID 19881528 DOI: 10.1038/Ng.471  0.789
2009 Cruz-Correa M, Zhao R, Oviedo M, Bernabe RD, Lacourt M, Cardona A, Lopez-Enriquez R, Wexner S, Cuffari C, Hylind L, Platz E, Cui H, Feinberg AP, Giardiello FM. Temporal stability and age-related prevalence of loss of imprinting of the insulin-like growth factor-2 gene. Epigenetics : Official Journal of the Dna Methylation Society. 4: 114-8. PMID 19242102 DOI: 10.4161/Epi.4.2.7954  0.335
2009 Wen B, Wu H, Shinkai Y, Irizarry RA, Feinberg AP. Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells. Nature Genetics. 41: 246-50. PMID 19151716 DOI: 10.1038/Ng.297  0.316
2009 Irizarry RA, Ladd-Acosta C, Wen B, Wu Z, Montano C, Onyango P, Cui H, Gabo K, Rongione M, Webster M, Ji H, Potash JB, Sabunciyan S, Feinberg AP. The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores. Nature Genetics. 41: 178-86. PMID 19151715 DOI: 10.1038/Ng.298  0.675
2008 Wen B, Wu H, Bjornsson H, Green RD, Irizarry R, Feinberg AP. Overlapping euchromatin/heterochromatin- associated marks are enriched in imprinted gene regions and predict allele-specific modification. Genome Research. 18: 1806-13. PMID 18849526 DOI: 10.1101/Gr.067587.108  0.347
2008 Nguyen P, Cui H, Bisht KS, Sun L, Patel K, Lee RS, Kugoh H, Oshimura M, Feinberg AP, Gius D. CTCFL/BORIS is a methylation-independent DNA-binding protein that preferentially binds to the paternal H19 differentially methylated region. Cancer Research. 68: 5546-51. PMID 18632606 DOI: 10.1158/0008-5472.CAN-08-1005  0.344
2008 Bjornsson HT, Albert TJ, Ladd-Acosta CM, Green RD, Rongione MA, Middle CM, Irizarry RA, Broman KW, Feinberg AP. SNP-specific array-based allele-specific expression analysis. Genome Research. 18: 771-9. PMID 18369178 DOI: 10.1101/Gr.073254.107  0.611
2008 Irizarry RA, Ladd-Acosta C, Carvalho B, Wu H, Brandenburg SA, Jeddeloh JA, Wen B, Feinberg AP. Comprehensive high-throughput arrays for relative methylation (CHARM). Genome Research. 18: 780-90. PMID 18316654 DOI: 10.1101/Gr.7301508  0.66
2008 Yu W, Gius D, Onyango P, Muldoon-Jacobs K, Karp J, Feinberg AP, Cui H. Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA. Nature. 451: 202-6. PMID 18185590 DOI: 10.1038/nature06468  0.306
2007 Ladd-Acosta C, Pevsner J, Sabunciyan S, Yolken RH, Webster MJ, Dinkins T, Callinan PA, Fan JB, Potash JB, Feinberg AP. DNA methylation signatures within the human brain. American Journal of Human Genetics. 81: 1304-15. PMID 17999367 DOI: 10.1086/524110  0.668
2007 Bjornsson HT, Brown LJ, Fallin MD, Rongione MA, Bibikova M, Wickham E, Fan JB, Feinberg AP. Epigenetic specificity of loss of imprinting of the IGF2 gene in Wilms tumors. Journal of the National Cancer Institute. 99: 1270-3. PMID 17686827 DOI: 10.1093/jnci/djm069  0.404
2007 Reinhold WC, Reimers MA, Maunakea AK, Kim S, Lababidi S, Scherf U, Shankavaram UT, Ziegler MS, Stewart C, Kouros-Mehr H, Cui H, Dolginow D, Scudiero DA, Pommier YG, Munroe DJ, ... Feinberg AP, et al. Detailed DNA methylation profiles of the E-cadherin promoter in the NCI-60 cancer cells. Molecular Cancer Therapeutics. 6: 391-403. PMID 17272646 DOI: 10.1158/1535-7163.Mct-06-0609  0.31
2005 Kaneda A, Feinberg AP. Loss of imprinting of IGF2: a common epigenetic modifier of intestinal tumor risk. Cancer Research. 65: 11236-40. PMID 16357124 DOI: 10.1158/0008-5472.CAN-05-2959  0.305
2005 Niemitz EL, Feinberg AP, Brandenburg SA, Grundy PE, DeBaun MR. Children with idiopathic hemihypertrophy and beckwith-wiedemann syndrome have different constitutional epigenotypes associated with wilms tumor. American Journal of Human Genetics. 77: 887-91. PMID 16252245 DOI: 10.1086/497540  0.647
2005 Mummert SK, Lobanenkov VA, Feinberg AP. Association of chromosome arm 16q loss with loss of imprinting of insulin-like growth factor-II in Wilms tumor. Genes, Chromosomes & Cancer. 43: 155-61. PMID 15761865 DOI: 10.1002/Gcc.20176  0.725
2004 Feinberg AP. The epigenetics of cancer etiology. Seminars in Cancer Biology. 14: 427-32. PMID 15489135 DOI: 10.1016/j.semcancer.2004.06.005  0.326
2004 Gius D, Cui H, Bradbury CM, Cook J, Smart DK, Zhao S, Young L, Brandenburg SA, Hu Y, Bisht KS, Ho AS, Mattson D, Sun L, Munson PJ, Chuang EY, ... ... Feinberg AP, et al. Distinct effects on gene expression of chemical and genetic manipulation of the cancer epigenome revealed by a multimodality approach. Cancer Cell. 6: 361-71. PMID 15488759 DOI: 10.1016/j.ccr.2004.08.029  0.336
2004 Niemitz EL, DeBaun MR, Fallon J, Murakami K, Kugoh H, Oshimura M, Feinberg AP. Microdeletion of LIT1 in familial Beckwith-Wiedemann syndrome. American Journal of Human Genetics. 75: 844-9. PMID 15372379 DOI: 10.1086/425343  0.676
2004 Niemitz EL, Feinberg AP. Epigenetics and assisted reproductive technology: a call for investigation. American Journal of Human Genetics. 74: 599-609. PMID 14991528 DOI: 10.1086/382897  0.64
2003 DeBaun MR, Niemitz EL, Feinberg AP. Association of in vitro fertilization with Beckwith-Wiedemann syndrome and epigenetic alterations of LIT1 and H19. American Journal of Human Genetics. 72: 156-60. PMID 12439823 DOI: 10.1086/346031  0.636
2003 Cruz-Correa M, Cui H, Giardiello FM, Palmer A, Hylind L, Feinberg A. Loss of imprinting of IGF2 is an epigenetic marker independently associated with colorectal cancer and not related to tobacco or alcohol consumption Gastroenterology. 124. DOI: 10.1016/S0016-5085(03)82783-X  0.316
2003 Cruz-Correa M, Cui H, Giardiello FM, Palmer A, Hylind L, Feinberg A. Loss of genomic imprinting is an epigenetic biomarker associated with early colorectal neoplasia in the general population Gastroenterology. 124. DOI: 10.1016/S0016-5085(03)82777-4  0.338
2002 Cui H, Onyango P, Brandenburg S, Wu Y, Hsieh CL, Feinberg AP. Loss of imprinting in colorectal cancer linked to hypomethylation of H19 and IGF2. Cancer Research. 62: 6442-6. PMID 12438232  0.373
2002 Feinberg AP, Cui H, Ohlsson R. DNA methylation and genomic imprinting: insights from cancer into epigenetic mechanisms. Seminars in Cancer Biology. 12: 389-98. PMID 12191638  0.336
2002 Onyango P, Jiang S, Uejima H, Shamblott MJ, Gearhart JD, Cui H, Feinberg AP. Monoallelic expression and methylation of imprinted genes in human and mouse embryonic germ cell lineages. Proceedings of the National Academy of Sciences of the United States of America. 99: 10599-604. PMID 12114541 DOI: 10.1073/Pnas.152327599  0.33
2002 Loukinov DI, Pugacheva E, Vatolin S, Pack SD, Moon H, Chernukhin I, Mannan P, Larsson E, Kanduri C, Vostrov AA, Cui H, Niemitz EL, Rasko JE, Docquier FM, Kistler M, ... ... Feinberg AP, et al. BORIS, a novel male germ-line-specific protein associated with epigenetic reprogramming events, shares the same 11-zinc-finger domain with CTCF, the insulator protein involved in reading imprinting marks in the soma. Proceedings of the National Academy of Sciences of the United States of America. 99: 6806-11. PMID 12011441 DOI: 10.1073/Pnas.092123699  0.681
2002 Rhee I, Bachman KE, Park BH, Jair KW, Yen RW, Schuebel KE, Cui H, Feinberg AP, Lengauer C, Kinzler KW, Baylin SB, Vogelstein B. DNMT1 and DNMT3b cooperate to silence genes in human cancer cells. Nature. 416: 552-6. PMID 11932749 DOI: 10.1038/416552A  0.704
2002 Strichman-Almashanu LZ, Lee RS, Onyango PO, Perlman E, Flam F, Frieman MB, Feinberg AP. A genome-wide screen for normally methylated human CpG islands that can identify novel imprinted genes. Genome Research. 12: 543-54. PMID 11932239 DOI: 10.1101/Gr.224102.  0.804
2002 DeBaun MR, Niemitz EL, McNeil DE, Brandenburg SA, Lee MP, Feinberg AP. Epigenetic alterations of H19 and LIT1 distinguish patients with Beckwith-Wiedemann syndrome with cancer and birth defects. American Journal of Human Genetics. 70: 604-11. PMID 11813134 DOI: 10.1086/338934  0.665
2002 Filippova GN, Qi CF, Ulmer JE, Moore JM, Ward MD, Hu YJ, Loukinov DI, Pugacheva EM, Klenova EM, Grundy PE, Feinberg AP, Cleton-Jansen AM, Moerland EW, Cornelisse CJ, Suzuki H, et al. Tumor-associated zinc finger mutations in the CTCF transcription factor selectively alter tts DNA-binding specificity. Cancer Research. 62: 48-52. PMID 11782357  0.311
2001 Ravenel JD, Broman KW, Perlman EJ, Niemitz EL, Jayawardena TM, Bell DW, Haber DA, Uejima H, Feinberg AP. Loss of imprinting of insulin-like growth factor-II (IGF2) gene in distinguishing specific biologic subtypes of Wilms tumor. Journal of the National Cancer Institute. 93: 1698-703. PMID 11717330 DOI: 10.1093/Jnci/93.22.1698  0.76
2001 Cui H, Niemitz EL, Ravenel JD, Onyango P, Brandenburg SA, Lobanenkov VV, Feinberg AP. Loss of imprinting of insulin-like growth factor-II in Wilms' tumor commonly involves altered methylation but not mutations of CTCF or its binding site. Cancer Research. 61: 4947-50. PMID 11431321  0.775
2000 Lee MP, Ravenel JD, Hu RJ, Lustig LR, Tomaselli G, Berger RD, Brandenburg SA, Litzi TJ, Bunton TE, Limb C, Francis H, Gorelikow M, Gu H, Washington K, Argani P, ... ... Feinberg AP, et al. Targeted disruption of the Kvlqt1 gene causes deafness and gastric hyperplasia in mice. The Journal of Clinical Investigation. 106: 1447-55. PMID 11120752 DOI: 10.1172/Jci10897  0.741
2000 Feinberg AP. DNA methylation, genomic imprinting and cancer. Current Topics in Microbiology and Immunology. 249: 87-99. PMID 10802940 DOI: 10.1007/978-3-642-59696-4_6  0.301
1999 Mitsuya K, Meguro M, Lee MP, Katoh M, Schulz TC, Kugoh H, Yoshida MA, Niikawa N, Feinberg AP, Oshimura M. LIT1, an imprinted antisense RNA in the human KvLQT1 locus identified by screening for differentially expressed transcripts using monochromosomal hybrids. Human Molecular Genetics. 8: 1209-17. PMID 10369866 DOI: 10.1093/HMG/8.7.1209  0.396
1999 Lee MP, DeBaun MR, Mitsuya K, Galonek HL, Brandenburg S, Oshimura M, Feinberg AP. Loss of imprinting of a paternally expressed transcript, with antisense orientation to KVLQT1, occurs frequently in Beckwith-Wiedemann syndrome and is independent of insulin-like growth factor II imprinting. Proceedings of the National Academy of Sciences of the United States of America. 96: 5203-8. PMID 10220444 DOI: 10.1073/Pnas.96.9.5203  0.375
1998 Randhawa GS, Cui H, Barletta JA, Strichman-Almashanu LZ, Talpaz M, Kantarjian H, Deisseroth AB, Champlin RC, Feinberg AP. Loss of imprinting in disease progression in chronic myelogenous leukemia. Blood. 91: 3144-7. PMID 9558368 DOI: 10.1182/Blood.V91.9.3144.3144_3144_3147  0.781
1997 Lee MP, DeBaun M, Randhawa G, Reichard BA, Elledge SJ, Feinberg AP. Low frequency of p57KIP2 mutation in Beckwith-Wiedemann syndrome. American Journal of Human Genetics. 61: 304-9. PMID 9311734 DOI: 10.1086/514858  0.306
1997 Lee MP, Hu RJ, Johnson LA, Feinberg AP. Human KVLQT1 gene shows tissue-specific imprinting and encompasses Beckwith-Wiedemann syndrome chromosomal rearrangements. Nature Genetics. 15: 181-5. PMID 9020845 DOI: 10.1038/ng0297-181  0.312
1996 Hu RJ, Lee MP, Johnson LA, Feinberg AP. A novel human homologue of yeast nucleosome assembly protein, 65 kb centromeric to the p57KIP2 gene, is biallelically expressed in fetal and adult tissues. Human Molecular Genetics. 5: 1743-8. PMID 8923002 DOI: 10.1093/hmg/5.11.1743  0.306
1996 Alders M, Bliek J, Redeker B, Ryan A, Feinberg A, Westerveld A, Little P, Mannens M. Cloning of candidate genes involved in the Beckwith-Wiedemann syndrome and childhood tumors. Medical and Pediatric Oncology. 27: 495-7. PMID 8827080 DOI: 10.1002/(Sici)1096-911X(199611)27:5<495::Aid-Mpo18>3.0.Co;2-9  0.36
1996 Matsuoka S, Thompson JS, Edwards MC, Barletta JM, Grundy P, Kalikin LM, Harper JW, Elledge SJ, Feinberg AP. Imprinting of the gene encoding a human cyclin-dependent kinase inhibitor, p57KIP2, on chromosome 11p15 Proceedings of the National Academy of Sciences of the United States of America. 93: 3026-3030. PMID 8610162 DOI: 10.1073/Pnas.93.7.3026  0.34
1994 Steenman MJ, Rainier S, Dobry CJ, Grundy P, Horon IL, Feinberg AP. Loss of imprinting of IGF2 is linked to reduced expression and abnormal methylation of H19 in Wilms' tumour. Nature Genetics. 7: 433-9. PMID 7920665 DOI: 10.1038/Ng0794-433  0.346
1993 Rainier S, Johnson LA, Dobry CJ, Ping AJ, Grundy PE, Feinberg AP. Relaxation of imprinted genes in human cancer. Nature. 362: 747-9. PMID 8385745 DOI: 10.1038/362747a0  0.349
1987 Feinberg AP, Vogelstein B. Alterations in DNA methylation in human colon neoplasia. Seminars in Surgical Oncology. 3: 149-51. PMID 3659719 DOI: 10.1002/Ssu.2980030304  0.521
1986 Trent J, Meltzer P, Rosenblum M, Harsh G, Kinzler K, Mashal R, Feinberg A, Vogelstein B. Evidence for rearrangement, amplification, and expression of c-myc in a human glioblastoma Proceedings of the National Academy of Sciences of the United States of America. 83: 470-473. PMID 3001737 DOI: 10.1073/Pnas.83.2.470  0.527
1985 Fearon ER, Feinberg AP, Hamilton SH, Vogelstein B. Loss of genes on the short arm of chromosome 11 in bladder cancer. Nature. 318: 377-80. PMID 2999610 DOI: 10.1038/318377A0  0.443
1985 Vogelstein B, Fearon ER, Hamilton SR, Feinberg AP. Use of restriction fragment length polymorphisms to determine the clonal origin of human tumors. Science (New York, N.Y.). 227: 642-5. PMID 2982210 DOI: 10.1126/Science.2982210  0.494
1985 Goelz SE, Vogelstein B, Hamilton SR, Feinberg AP. Hypomethylation of DNA from benign and malignant human colon neoplasms. Science (New York, N.Y.). 228: 187-90. PMID 2579435 DOI: 10.1126/Science.2579435  0.473
1984 Feinberg AP, Vogelstein B. "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum. Analytical Biochemistry. 137: 266-7. PMID 6329026 DOI: 10.1016/0003-2697(84)90381-6  0.367
1984 Fearon ER, Vogelstein B, Feinberg AP. Somatic deletion and duplication of genes on chromosome 11 in Wilms' tumours. Nature. 309: 176-8. PMID 6325939 DOI: 10.1038/309176A0  0.434
1983 Feinberg AP, Vogelstein B, Droller MJ, Baylin SB, Nelkin BD. Mutation affecting the 12th amino acid of the c-Ha-ras oncogene product occurs infrequently in human cancer. Science (New York, N.Y.). 220: 1175-7. PMID 6304875 DOI: 10.1126/Science.6304875  0.392
1983 Feinberg AP, Vogelstein B. Hypomethylation distinguishes genes of some human cancers from their normal counterparts. Nature. 301: 89-92. PMID 6185846 DOI: 10.1038/301089A0  0.539
Low-probability matches (unlikely to be authored by this person)
2023 Lo EKW, Mears BM, Maurer HC, Idrizi A, Hansen KD, Thompson ED, Hruban RH, Olive KP, Feinberg AP. Comprehensive DNA methylation analysis indicates that pancreatic intraepithelial neoplasia lesions are acinar-derived and epigenetically primed for carcinogenesis. Cancer Research. PMID 36989344 DOI: 10.1158/0008-5472.CAN-22-4052  0.299
2005 Feinberg AP. Cancer epigenetics is no Mickey Mouse. Cancer Cell. 8: 267-8. PMID 16226700 DOI: 10.1016/j.ccr.2005.10.011  0.298
1999 Lee MP, Brandenburg S, Landes GM, Adams M, Miller G, Feinberg AP. Two novel genes in the center of the 11p15 imprinted domain escape genomic imprinting. Human Molecular Genetics. 8: 683-90. PMID 10072438 DOI: 10.1093/HMG/8.4.683  0.297
2008 Nguyen P, Bar-Sela G, Sun L, Bisht KS, Cui H, Kohn E, Feinberg AP, Gius D. BAT3 and SET1A form a complex with CTCFL/BORIS to modulate H3K4 histone dimethylation and gene expression. Molecular and Cellular Biology. 28: 6720-9. PMID 18765639 DOI: 10.1128/MCB.00568-08  0.294
2021 Abante J, Kambhampati S, Feinberg AP, Goutsias J. Estimating DNA methylation potential energy landscapes from nanopore sequencing data. Scientific Reports. 11: 21619. PMID 34732768 DOI: 10.1038/s41598-021-00781-x  0.29
1993 Koi M, Johnson LA, Kalikin LM, Little PF, Nakamura Y, Feinberg AP. Tumor cell growth arrest caused by subchromosomal transferable DNA fragments from chromosome 11. Science (New York, N.Y.). 260: 361-4. PMID 8469989 DOI: 10.1126/science.8469989  0.289
2008 Sun L, Huang L, Nguyen P, Bisht KS, Bar-Sela G, Ho AS, Bradbury CM, Yu W, Cui H, Lee S, Trepel JB, Feinberg AP, Gius D. DNA methyltransferase 1 and 3B activate BAG-1 expression via recruitment of CTCFL/BORIS and modulation of promoter histone methylation. Cancer Research. 68: 2726-35. PMID 18413740 DOI: 10.1158/0008-5472.CAN-07-6654  0.289
1998 Jiang S, Hemann MA, Lee MP, Feinberg AP. Strain-dependent developmental relaxation of imprinting of an endogenous mouse gene, Kvlqt1. Genomics. 53: 395-9. PMID 9799609 DOI: 10.1006/GENO.1998.5511  0.289
2015 Multhaup ML, Seldin MM, Jaffe AE, Lei X, Kirchner H, Mondal P, Li Y, Rodriguez V, Drong A, Hussain M, Lindgren C, McCarthy M, Näslund E, Zierath JR, Wong GW, ... Feinberg AP, et al. Mouse-human experimental epigenetic analysis unmasks dietary targets and genetic liability for diabetic phenotypes. Cell Metabolism. 21: 138-49. PMID 25565211 DOI: 10.1016/J.Cmet.2014.12.014  0.289
2015 Vandiver AR, Irizarry RA, Hansen KD, Garza LA, Runarsson A, Li X, Chien AL, Wang TS, Leung SG, Kang S, Feinberg AP. Age and sun exposure-related widespread genomic blocks of hypomethylation in nonmalignant skin. Genome Biology. 16: 80. PMID 25886480 DOI: 10.1186/S13059-015-0644-Y  0.287
1997 Hu RJ, Lee MP, Connors TD, Johnson LA, Burn TC, Su K, Landes GM, Feinberg AP. A 2.5-Mb transcript map of a tumor-suppressing subchromosomal transferable fragment from 11p15.5, and isolation and sequence analysis of three novel genes. Genomics. 46: 9-17. PMID 9403053 DOI: 10.1006/geno.1997.4981  0.287
1998 Paulsen M, Davies KR, Bowden LM, Villar AJ, Franck O, Fuermann M, Dean WL, Moore TF, Rodrigues N, Davies KE, Hu RJ, Feinberg AP, Maher ER, Reik W, Walter J. Syntenic organization of the mouse distal chromosome 7 imprinting cluster and the Beckwith-Wiedemann syndrome region in chromosome 11p15.5. Human Molecular Genetics. 7: 1149-59. PMID 9618174 DOI: 10.1093/hmg/7.7.1149  0.286
2015 Bakulski KM, Lee H, Feinberg JI, Wells EM, Brown S, Herbstman JB, Witter FR, Halden RU, Caldwell K, Mortensen ME, Jaffe AE, Moye J, Caulfield LE, Pan Y, Goldman LR, ... Feinberg AP, et al. Prenatal mercury concentration is associated with changes in DNA methylation at TCEANC2 in newborns. International Journal of Epidemiology. PMID 25906783 DOI: 10.1093/Ije/Dyv032  0.285
1998 Randhawa GS, Bell DW, Testa JR, Feinberg AP. Identification and mapping of human histone acetylation modifier gene homologues. Genomics. 51: 262-9. PMID 9722949 DOI: 10.1006/geno.1998.5370  0.284
2010 Wu H, Caffo B, Jaffee HA, Irizarry RA, Feinberg AP. Redefining CpG islands using hidden Markov models. Biostatistics (Oxford, England). 11: 499-514. PMID 20212320 DOI: 10.1093/Biostatistics/Kxq005  0.283
2017 Jenkinson G, Pujadas E, Goutsias J, Feinberg AP. Potential energy landscapes identify the information-theoretic nature of the epigenome. Nature Genetics. PMID 28346445 DOI: 10.1038/ng.3811  0.283
2019 Wulfridge P, Langmead B, Feinberg AP, Hansen KD. Analyzing whole genome bisulfite sequencing data from highly divergent genotypes. Nucleic Acids Research. PMID 31392989 DOI: 10.1093/Nar/Gkz674  0.282
1994 Alders M, Bliek J, Redeker E, Hoovers J, Feinberg A, Little P, Westerveld A, Mannens M. Characterization of the chromosomal regions involved in the Beckwith-Wiedemann syndrome Cancer Genetics and Cytogenetics. 77: 168. DOI: 10.1016/0165-4608(94)90309-3  0.282
2011 Lee RS, Tamashiro KL, Aryee MJ, Murakami P, Seifuddin F, Herb B, Huo Y, Rongione M, Feinberg AP, Moran TH, Potash JB. Adaptation of the CHARM DNA methylation platform for the rat genome reveals novel brain region-specific differences. Epigenetics : Official Journal of the Dna Methylation Society. 6: 1378-90. PMID 22048247 DOI: 10.4161/epi.6.11.18072  0.281
2017 Meng W, Zhu Z, Jiang X, Too CL, Uebe S, Jagodic M, Kockum I, Murad S, Ferrucci L, Alfredsson L, Zou H, Klareskog L, Feinberg AP, Ekström TJ, Padyukov L, et al. DNA methylation mediates genotype and smoking interaction in the development of anti-citrullinated peptide antibody-positive rheumatoid arthritis. Arthritis Research & Therapy. 19: 71. PMID 28356135 DOI: 10.1186/S13075-017-1276-2  0.281
2006 Feinberg AP, Ohlsson R, Henikoff S. The epigenetic progenitor origin of human cancer Nature Reviews Genetics. 7: 21-33. PMID 16369569 DOI: 10.1038/nrg1748  0.278
1995 Hoovers JM, Kalikin LM, Johnson LA, Alders M, Redeker B, Law DJ, Bliek J, Steenman M, Benedict M, Wiegant J, Lengauer C, Taillon-Miller P, Schlessinger D, Edwards MC, Elledge SJ, ... ... Feinberg AP, et al. Multiple genetic loci within 11p15 defined by Beckwith-Wiedemann syndrome rearrangement breakpoints and subchromosomal transferable fragments. Proceedings of the National Academy of Sciences of the United States of America. 92: 12456-60. PMID 8618920 DOI: 10.1073/Pnas.92.26.12456  0.276
2009 Irizarry RA, Wu H, Feinberg AP. A species-generalized probabilistic model-based definition of CpG islands. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 20: 674-80. PMID 19777308 DOI: 10.1007/S00335-009-9222-5  0.276
2011 Onyango P, Feinberg AP. A nucleolar protein, H19 opposite tumor suppressor (HOTS), is a tumor growth inhibitor encoded by a human imprinted H19 antisense transcript. Proceedings of the National Academy of Sciences of the United States of America. 108: 16759-64. PMID 21940503 DOI: 10.1073/pnas.1110904108  0.275
1994 Bestor TH, Chandler VL, Feinberg AP. Epigenetic effects in eukaryotic gene expression. Developmental Genetics. 15: 458-62. PMID 7834904 DOI: 10.1002/Dvg.1020150603  0.275
1989 Delattre O, Law D, Olschwang S, Melot T, Peter M, Sastre X, Validire P, Salmon R, Feinberg A, Thomas G. 113 Prevalence of allelic loss and Ki-ras mutation in colorectal tumors Cancer Genetics and Cytogenetics. 38: 195. DOI: 10.1016/0165-4608(89)90640-7  0.274
2008 Bjornsson HT, Sigurdsson MI, Fallin MD, Irizarry RA, Aspelund T, Cui H, Yu W, Rongione MA, Ekström TJ, Harris TB, Launer LJ, Eiriksdottir G, Leppert MF, Sapienza C, Gudnason V, ... Feinberg AP, et al. Intra-individual change over time in DNA methylation with familial clustering. Jama. 299: 2877-83. PMID 18577732 DOI: 10.1001/Jama.299.24.2877  0.273
2003 Kraggerud SM, Lee MP, Skotheim RI, Stenwig AE, Fosså SD, Feinberg AP, Lothe RA. Lack of parental origin specificity of altered alleles at 11p15 in testicular germ cell tumors. Cancer Genetics and Cytogenetics. 147: 1-8. PMID 14580764  0.273
2010 Feinberg AP. Genome-scale approaches to the epigenetics of common human disease. Virchows Archiv : An International Journal of Pathology. 456: 13-21. PMID 19844740 DOI: 10.1007/s00428-009-0847-2  0.271
1988 Law DJ, Olschwang S, Monpezat JP, Lefrançois D, Jagelman D, Petrelli NJ, Thomas G, Feinberg AP. Concerted nonsyntenic allelic loss in human colorectal carcinoma. Science (New York, N.Y.). 241: 961-5. PMID 2841761 DOI: 10.1126/science.2841761  0.269
2003 Ohlsson R, Kanduri C, Whitehead J, Pfeifer S, Lobanenkov V, Feinberg AP. Epigenetic variability and the evolution of human cancer. Advances in Cancer Research. 88: 145-68. PMID 12665055  0.269
2012 Wen B, Wu H, Loh YH, Briem E, Daley GQ, Feinberg AP. Euchromatin islands in large heterochromatin domains are enriched for CTCF binding and differentially DNA-methylated regions. Bmc Genomics. 13: 566. PMID 23102236 DOI: 10.1186/1471-2164-13-566  0.268
2004 Cruz-Correa M, Cui H, Giardiello FM, Powe NR, Hylind L, Robinson A, Hutcheon DF, Kafonek DR, Brandenburg S, Wu Y, He X, Feinberg AP. Loss of imprinting of insulin growth factor II gene: a potential heritable biomarker for colon neoplasia predisposition. Gastroenterology. 126: 964-70. PMID 15057734 DOI: 10.1053/J.Gastro.2003.12.051  0.268
2017 Mendelson MM, Marioni RE, Joehanes R, Liu C, Hedman ÅK, Aslibekyan S, Demerath EW, Guan W, Zhi D, Yao C, Huan T, Willinger C, Chen B, Courchesne P, Multhaup M, ... ... Feinberg A, et al. Association of Body Mass Index with DNA Methylation and Gene Expression in Blood Cells and Relations to Cardiometabolic Disease: A Mendelian Randomization Approach. Plos Medicine. 14: e1002215. PMID 28095459 DOI: 10.1371/Journal.Pmed.1002215  0.267
1992 Koi M, Johnson LA, Feinberg AP. A novel general strategy for cloning tumor suppressor genes using radiation-reduced chromosomal superfragments Tohoku Journal of Experimental Medicine. 168: 167-168. PMID 1306300 DOI: 10.1620/tjem.168.167  0.266
2001 Feinberg AP. Methylation meets genomics. Nature Genetics. 27: 9-10. PMID 11137987 DOI: 10.1038/83825  0.264
1990 Huang A, Campbell CE, Bonetta L, McAndrews-Hill MS, Chilton-MacNeill S, Coppes MJ, Law DJ, Feinberg AP, Yeger H, Williams BR. Tissue, developmental, and tumor-specific expression of divergent transcripts in Wilms tumor. Science (New York, N.Y.). 250: 991-4. PMID 2173145 DOI: 10.1126/science.2173145  0.263
2005 Sakatani T, Kaneda A, Iacobuzio-Donahue CA, Carter MG, de Boom Witzel S, Okano H, Ko MS, Ohlsson R, Longo DL, Feinberg AP. Loss of imprinting of Igf2 alters intestinal maturation and tumorigenesis in mice. Science (New York, N.Y.). 307: 1976-8. PMID 15731405 DOI: 10.1126/Science.1108080  0.261
2007 Rivera MN, Kim WJ, Wells J, Driscoll DR, Brannigan BW, Han M, Kim JC, Feinberg AP, Gerald WL, Vargas SO, Chin L, Iafrate AJ, Bell DW, Haber DA. An X chromosome gene, WTX, is commonly inactivated in Wilms tumor. Science (New York, N.Y.). 315: 642-5. PMID 17204608 DOI: 10.1126/Science.1137509  0.261
2007 Postovit LM, Costa FF, Bischof JM, Seftor EA, Wen B, Seftor RE, Feinberg AP, Soares MB, Hendrix MJ. The commonality of plasticity underlying multipotent tumor cells and embryonic stem cells. Journal of Cellular Biochemistry. 101: 908-17. PMID 17177292 DOI: 10.1002/Jcb.21227  0.26
1996 Lee PJ, Washer LL, Law DJ, Boland CR, Horon IL, Feinberg AP. Limited up-regulation of DNA methyltransferase in human colon cancer reflecting increased cell proliferation. Proceedings of the National Academy of Sciences of the United States of America. 93: 10366-70. PMID 8816806 DOI: 10.1073/pnas.93.19.10366  0.259
1989 Reeve AE, Sih SA, Raizis AM, Feinberg AP. Loss of allelic heterozygosity at a second locus on chromosome 11 in sporadic Wilms' tumor cells. Molecular and Cellular Biology. 9: 1799-803. PMID 2542777 DOI: 10.1128/MCB.9.4.1799  0.259
2012 Pujadas E, Feinberg AP. Regulated noise in the epigenetic landscape of development and disease. Cell. 148: 1123-31. PMID 22424224 DOI: 10.1016/j.cell.2012.02.045  0.257
2003 Jouvenot Y, Ginjala V, Zhang L, Liu PQ, Oshimura M, Feinberg AP, Wolffe AP, Ohlsson R, Gregory PD. Targeted regulation of imprinted genes by synthetic zinc-finger transcription factors. Gene Therapy. 10: 513-22. PMID 12621455 DOI: 10.1038/Sj.Gt.3301930  0.256
2010 Lennerz JK, Timmerman RJ, Grange DK, DeBaun MR, Feinberg AP, Zehnbauer BA. Addition of H19 'loss of methylation testing' for Beckwith-Wiedemann syndrome (BWS) increases the diagnostic yield. The Journal of Molecular Diagnostics : Jmd. 12: 576-88. PMID 20616360 DOI: 10.2353/jmoldx.2010.100005  0.255
2006 Callinan PA, Feinberg AP. The emerging science of epigenomics. Human Molecular Genetics. 15: R95-101. PMID 16651376 DOI: 10.1093/hmg/ddl095  0.255
2016 Feinberg AP, Koldobskiy MA, Göndör A. Disease mechanisms: Epigenetic modulators, modifiers and mediators in cancer aetiology and progression. Nature Reviews. Genetics. PMID 26972587 DOI: 10.1038/Nrg.2016.13  0.255
2018 Vanaja KG, Timp W, Feinberg AP, Levchenko A. A Loss of Epigenetic Control Can Promote Cell Death through Reversing the Balance of Pathways in a Signaling Network. Molecular Cell. PMID 30244832 DOI: 10.1016/J.Molcel.2018.08.025  0.252
2000 Alders M, Ryan A, Hodges M, Bliek J, Feinberg AP, Privitera O, Westerveld A, Little PF, Mannens M. Disruption of a novel imprinted zinc-finger gene, ZNF215, in Beckwith-Wiedemann syndrome. American Journal of Human Genetics. 66: 1473-84. PMID 10762538 DOI: 10.1086/302892  0.252
1998 Cui H, Horon IL, Ohlsson R, Hamilton SR, Feinberg AP. Loss of imprinting in normal tissue of colorectal cancer patients with microsatellite instability. Nature Medicine. 4: 1276-80. PMID 9809551 DOI: 10.1038/3260  0.252
2016 Gomez-Cabrero D, Almgren M, Sjöholm LK, Hensvold AH, Ringh MV, Tryggvadottir R, Kere J, Scheynius A, Acevedo N, Reinius L, Taub MA, Montano C, Aryee MJ, Feinberg JI, Feinberg AP, et al. High-specificity bioinformatics framework for epigenomic profiling of discordant twins reveals specific and shared markers for ACPA and ACPA-positive rheumatoid arthritis. Genome Medicine. 8: 124. PMID 27876072 DOI: 10.1186/s13073-016-0374-0  0.245
2010 Feinberg AP, Irizarry RA. Evolution in health and medicine Sackler colloquium: Stochastic epigenetic variation as a driving force of development, evolutionary adaptation, and disease. Proceedings of the National Academy of Sciences of the United States of America. 107: 1757-64. PMID 20080672 DOI: 10.1073/Pnas.0906183107  0.242
2013 Montaño CM, Irizarry RA, Kaufmann WE, Talbot K, Gur RE, Feinberg AP, Taub MA. Measuring cell-type specific differential methylation in human brain tissue. Genome Biology. 14: R94. PMID 24000956 DOI: 10.1186/Gb-2013-14-8-R94  0.242
2009 Timp W, Levchenko A, Feinberg AP. A new link between epigenetic progenitor lesions in cancer and the dynamics of signal transduction. Cell Cycle (Georgetown, Tex.). 8: 383-90. PMID 19177016 DOI: 10.4161/Cc.8.3.7542  0.242
2019 Chan RF, Shabalin AA, Montano C, Hannon E, Hultman CM, Fallin MD, Feinberg AP, Mill J, van den Oord EJCG, Aberg KA. Independent Methylome-Wide Association Studies of Schizophrenia Detect Consistent Case-Control Differences. Schizophrenia Bulletin. PMID 31165892 DOI: 10.1093/Schbul/Sbz056  0.242
2000 Krasner A, Wallace L, Thiagalingam A, Jones C, Lengauer C, Minahan L, Ma Y, Kalikin L, Feinberg AP, Jabs EW, Tunnacliffe A, Baylin SB, Ball DW, Nelkin BD. Cloning and chromosomal localization of the human BARX2 homeobox protein gene. Gene. 250: 171-80. PMID 10854790 DOI: 10.1016/S0378-1119(00)00169-4  0.241
2004 Feinberg AP, Tycko B. The history of cancer epigenetics. Nature Reviews. Cancer. 4: 143-53. PMID 14732866 DOI: 10.1038/Nrc1279  0.241
2012 Herb BR, Wolschin F, Hansen KD, Aryee MJ, Langmead B, Irizarry R, Amdam GV, Feinberg AP. Reversible switching between epigenetic states in honeybee behavioral subcastes. Nature Neuroscience. 15: 1371-3. PMID 22983211 DOI: 10.1038/Nn.3218  0.239
2015 Feinberg AP, Fallin MD. Epigenetics at the Crossroads of Genes and the Environment. Jama. 314: 1129-30. PMID 26372577 DOI: 10.1001/Jama.2015.10414  0.239
2019 Rizzardi LF, Hickey PF, Rodriguez DiBlasi V, Tryggvadóttir R, Callahan CM, Idrizi A, Hansen KD, Feinberg AP. Neuronal brain-region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability. Nature Neuroscience. PMID 30643296 DOI: 10.1038/S41593-018-0297-8  0.235
2007 Kaneda A, Wang CJ, Cheong R, Timp W, Onyango P, Wen B, Iacobuzio-Donahue CA, Ohlsson R, Andraos R, Pearson MA, Sharov AA, Longo DL, Ko MS, Levchenko A, Feinberg AP. Enhanced sensitivity to IGF-II signaling links loss of imprinting of IGF2 to increased cell proliferation and tumor risk. Proceedings of the National Academy of Sciences of the United States of America. 104: 20926-31. PMID 18087038 DOI: 10.1073/Pnas.0710359105  0.229
2016 Montano C, Taub MA, Jaffe A, Briem E, Feinberg JI, Trygvadottir R, Idrizi A, Runarsson A, Berndsen B, Gur RC, Moore TM, Perry RT, Fugman D, Sabunciyan S, Yolken RH, ... ... Feinberg AP, et al. Association of DNA Methylation Differences With Schizophrenia in an Epigenome-Wide Association Study. Jama Psychiatry. PMID 27074206 DOI: 10.1001/Jamapsychiatry.2016.0144  0.221
2002 Onyango P, Celic I, McCaffery JM, Boeke JD, Feinberg AP. SIRT3, a human SIR2 homologue, is an NAD-dependent deacetylase localized to mitochondria. Proceedings of the National Academy of Sciences of the United States of America. 99: 13653-8. PMID 12374852 DOI: 10.1073/Pnas.222538099  0.221
2012 Jaffe AE, Murakami P, Lee H, Leek JT, Fallin MD, Feinberg AP, Irizarry RA. Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies. International Journal of Epidemiology. 41: 200-9. PMID 22422453 DOI: 10.1093/Ije/Dyr238  0.22
1996 Nakamura T, Largaespada DA, Lee MP, Johnson LA, Ohyashiki K, Toyama K, Chen SJ, Willman CL, Chen IM, Feinberg AP, Jenkins NA, Copeland NG, Shaughnessy JD. Fusion of the nucleoporin gene NUP98 to HOXA9 by the chromosome translocation t(7;11)(p15;p15) in human myeloid leukaemia. Nature Genetics. 12: 154-8. PMID 8563753 DOI: 10.1038/Ng0296-154  0.217
1993 Feinberg AP. Genomic imprinting and gene activation in cancer. Nature Genetics. 4: 110-3. PMID 8348145 DOI: 10.1038/ng0693-110  0.217
2016 Ligthart S, Marzi C, Aslibekyan S, Mendelson MM, Conneely KN, Tanaka T, Colicino E, Waite LL, Joehanes R, Guan W, Brody JA, Elks C, Marioni R, Jhun MA, Agha G, ... ... Feinberg AP, et al. DNA methylation signatures of chronic low-grade inflammation are associated with complex diseases. Genome Biology. 17: 255. PMID 27955697 DOI: 10.1186/S13059-016-1119-5  0.215
2021 Rizzardi LF, Hickey PF, Idrizi A, Tryggvadóttir R, Callahan CM, Stephens KE, Taverna SD, Zhang H, Ramazanoglu S, Hansen KD, Feinberg AP. Human brain region-specific variably methylated regions are enriched for heritability of distinct neuropsychiatric traits. Genome Biology. 22: 116. PMID 33888138 DOI: 10.1186/s13059-021-02335-w  0.214
2019 Agha G, Mendelson MM, Ward-Caviness CK, Joehanes R, Huan T, Gondalia R, Salfati E, Brody JA, Fiorito G, Bressler J, Chen BH, Ligthart S, Guarrera S, Colicino E, Just AC, ... ... Feinberg AP, et al. Blood Leukocyte DNA Methylation Predicts Risk of Future Myocardial Infarction and Coronary Heart Disease. Circulation. 140: 645-657. PMID 31424985 DOI: 10.1161/Circulationaha.118.039357  0.213
2000 Onyango P, Miller W, Lehoczky J, Leung CT, Birren B, Wheelan S, Dewar K, Feinberg AP. Sequence and comparative analysis of the mouse 1-megabase region orthologous to the human 11p15 imprinted domain. Genome Research. 10: 1697-710. PMID 11076855 DOI: 10.1101/Gr.161800  0.213
2019 Garrett-Bakelman FE, Darshi M, Green SJ, Gur RC, Lin L, Macias BR, McKenna MJ, Meydan C, Mishra T, Nasrini J, Piening BD, Rizzardi LF, Sharma K, Siamwala JH, Taylor L, ... ... Feinberg AP, et al. The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight. Science (New York, N.Y.). 364. PMID 30975860 DOI: 10.1126/Science.Aau8650  0.211
2013 Reddy KL, Feinberg AP. Higher order chromatin organization in cancer. Seminars in Cancer Biology. 23: 109-15. PMID 23266653 DOI: 10.1016/J.Semcancer.2012.12.001  0.209
2023 Feinberg AP, Levchenko A. Epigenetics as a mediator of plasticity in cancer. Science (New York, N.Y.). 379: eaaw3835. PMID 36758093 DOI: 10.1126/science.aaw3835  0.203
2008 Feinberg AP. Epigenetics at the epicenter of modern medicine. Jama. 299: 1345-50. PMID 18349095 DOI: 10.1001/jama.299.11.1345  0.202
2009 Feinberg A. Interview: Professor Andrew Feinberg speaks to Epigenomics. Epigenomics. 1: 25-7. PMID 22122634 DOI: 10.2217/epi.09.8  0.201
2023 Wulfridge P, Davidovich A, Salvador AC, Manno GC, Tryggvadottir R, Idrizi A, Huda MN, Bennett BJ, Adams LG, Hansen KD, Threadgill DW, Feinberg AP. Precision pharmacological reversal of genotype-specific diet-induced metabolic syndrome in mice informed by transcriptional regulation. Biorxiv : the Preprint Server For Biology. PMID 37163127 DOI: 10.1101/2023.04.25.538156  0.2
2004 Bjornsson HT, Fallin MD, Feinberg AP. An integrated epigenetic and genetic approach to common human disease. Trends in Genetics : Tig. 20: 350-8. PMID 15262407 DOI: 10.1016/J.Tig.2004.06.009  0.2
1995 Boland CR, Sato J, Appelman HD, Bresalier RS, Feinberg AP. Microallelotyping defines the sequence and tempo of allelic losses at tumour suppressor gene loci during colorectal cancer progression. Nature Medicine. 1: 902-9. PMID 7585215 DOI: 10.1038/nm0995-902  0.198
2004 Yu W, Ginjala V, Pant V, Chernukhin I, Whitehead J, Docquier F, Farrar D, Tavoosidana G, Mukhopadhyay R, Kanduri C, Oshimura M, Feinberg AP, Lobanenkov V, Klenova E, Ohlsson R. Poly(ADP-ribosyl)ation regulates CTCF-dependent chromatin insulation. Nature Genetics. 36: 1105-10. PMID 15361875 DOI: 10.1038/ng1426  0.197
2003 Cui H, Cruz-Correa M, Giardiello FM, Hutcheon DF, Kafonek DR, Brandenburg S, Wu Y, He X, Powe NR, Feinberg AP. Loss of IGF2 imprinting: a potential marker of colorectal cancer risk. Science (New York, N.Y.). 299: 1753-5. PMID 12637750 DOI: 10.1126/Science.1080902  0.194
2000 Uejima H, Lee MP, Cui H, Feinberg AP. Hot-stop PCR: a simple and general assay for linear quantitation of allele ratios. Nature Genetics. 25: 375-6. PMID 10932175 DOI: 10.1038/78040  0.193
2016 Bakulski KM, Feinberg JI, Andrews SV, Yang J, Brown S, McKenney S, Witter F, Walston J, Feinberg AP, Fallin MD. DNA methylation of cord blood cell types: Applications for mixed cell birth studies. Epigenetics. 0. PMID 27019159 DOI: 10.1080/15592294.2016.1161875  0.189
2008 Potash JB, Buervenich S, Cox NJ, Zandi PP, Akula N, Steele J, Rathe JA, Avramopoulos D, Detera-Wadleigh SD, Gershon ES, DePaulo JR, Feinberg AP, McMahon FJ. Gene-based SNP mapping of a psychotic bipolar affective disorder linkage region on 22q12.3: association with HMG2L1 and TOM1. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. 147: 59-67. PMID 17671966 DOI: 10.1002/Ajmg.B.30574  0.185
2023 Wulfridge P, Davidovich A, Salvador AC, Manno GC, Tryggvadottir R, Idrizi A, Huda MN, Bennett BJ, Adams LG, Hansen KD, Threadgill DW, Feinberg AP. Precision pharmacological reversal of strain-specific diet-induced metabolic syndrome in mice informed by epigenetic and transcriptional regulation. Plos Genetics. 19: e1010997. PMID 37871105 DOI: 10.1371/journal.pgen.1010997  0.184
1994 Ranier S, Dobry CJ, Feinberg AP. Transcribed dinucleotide repeat polymorphism in the IGF2 gene. Human Molecular Genetics. 3: 386. PMID 8004123 DOI: 10.1093/hmg/3.2.386  0.184
1988 Rainier S, Feinberg AP. Capture and characterization of 5-aza-2'-deoxycytidine-treated C3H/10T1/2 cells prior to transformation. Proceedings of the National Academy of Sciences of the United States of America. 85: 6384-8. PMID 2457912 DOI: 10.1073/pnas.85.17.6384  0.181
2015 Marioni RE, Shah S, McRae AF, Chen BH, Colicino E, Harris SE, Gibson J, Henders AK, Redmond P, Cox SR, Pattie A, Corley J, Murphy L, Martin NG, Montgomery GW, ... Feinberg AP, et al. DNA methylation age of blood predicts all-cause mortality in later life. Genome Biology. 16: 25. PMID 25633388 DOI: 10.1186/S13059-015-0584-6  0.181
1997 Koi M, Lamb PW, Filatov L, Feinberg AP, Barrett JC. Construction of chicken x human microcell hybrids for human gene targeting. Cytogenetics and Cell Genetics. 76: 72-6. PMID 9154132 DOI: 10.1159/000134519  0.18
2007 Feinberg AP. An epigenetic approach to cancer etiology. Cancer Journal (Sudbury, Mass.). 13: 70-4. PMID 17464249 DOI: 10.1097/PPO.0b013e31803c6e3b  0.178
2018 Wilton R, Li X, Feinberg AP, Szalay AS. Arioc: GPU-accelerated alignment of short bisulfite-treated reads. Bioinformatics (Oxford, England). PMID 29554207 DOI: 10.1093/Bioinformatics/Bty167  0.178
2007 Feinberg AP. Phenotypic plasticity and the epigenetics of human disease. Nature. 447: 433-40. PMID 17522677 DOI: 10.1038/nature05919  0.177
2013 Feinberg AP. The epigenetic basis of common human disease. Transactions of the American Clinical and Climatological Association. 124: 84-93. PMID 23874013  0.177
2016 Chen BH, Marioni RE, Colicino E, Peters MJ, Ward-Caviness CK, Tsai PC, Roetker NS, Just AC, Demerath EW, Guan W, Bressler J, Fornage M, Studenski S, Vandiver AR, Moore AZ, ... ... Feinberg AP, et al. DNA methylation-based measures of biological age: meta-analysis predicting time to death. Aging. PMID 27690265 DOI: 10.18632/aging.101020  0.173
2016 Rizzardi LF, Kunz H, Rubins K, Chouker A, Quiriarte H, Sams C, Crucian BE, Feinberg AP. Evaluation of techniques for performing cellular isolation and preservation during microgravity conditions. Npj Microgravity. 2: 16025. PMID 28725735 DOI: 10.1038/npjmgrav.2016.25  0.17
2002 Feinberg AP, Oshimura M, Barrett JC. Epigenetic mechanisms in human disease. Cancer Research. 62: 6784-7. PMID 12438281  0.167
2003 Feinberg AP, Williams BR. Wilms' tumor as a model for cancer biology. Methods in Molecular Biology (Clifton, N.J.). 222: 239-48. PMID 12710691 DOI: 10.1385/1-59259-328-3:239  0.167
2013 Feinberg A. Apocalypse soon, if we keep on cutting science New Scientist. 219: 26-27. DOI: 10.1016/S0262-4079(13)61929-6  0.16
2018 Feinberg AP. The Key Role of Epigenetics in Human Disease Prevention and Mitigation. The New England Journal of Medicine. 378: 1323-1334. PMID 29617578 DOI: 10.1056/NEJMra1402513  0.159
2005 Chang AS, Moley KH, Wangler M, Feinberg AP, Debaun MR. Association between Beckwith-Wiedemann syndrome and assisted reproductive technology: a case series of 19 patients. Fertility and Sterility. 83: 349-54. PMID 15705373 DOI: 10.1016/J.Fertnstert.2004.07.964  0.153
2023 Ni Q, Ge Z, Li Y, Shatkin G, Fu J, Bera K, Yang Y, Wang Y, Sen A, Wu Y, Vasconcelosi ACN, Feinberg AP, Konstantopoulos K, Sun SX. Cytoskeletal activation of NHE1 regulates cell volume and DNA methylation. Biorxiv : the Preprint Server For Biology. PMID 37693593 DOI: 10.1101/2023.08.31.555808  0.152
1994 Lee JY, Koi M, Stanbridge EJ, Oshimura M, Kumamoto AT, Feinberg AP. Simple purification of human chromosomes to homogeneity using muntjac hybrid cells Nature Genetics. 7: 29-33. PMID 8075635 DOI: 10.1038/Ng0594-29  0.151
2010 Feinberg AP. Epigenomics reveals a functional genome anatomy and a new approach to common disease. Nature Biotechnology. 28: 1049-52. PMID 20944596 DOI: 10.1038/nbt1010-1049  0.146
2012 Vanaja KG, Feinberg AP, Levchenko A. Stem cell differentiation as a renewal-reward process: predictions and validation in the colonic crypt. Advances in Experimental Medicine and Biology. 736: 199-209. PMID 22161330 DOI: 10.1007/978-1-4419-7210-1_11  0.143
2007 Gosden RG, Feinberg AP. Genetics and epigenetics--nature's pen-and-pencil set. The New England Journal of Medicine. 356: 731-3. PMID 17301306 DOI: 10.1056/NEJMe068284  0.134
2022 Bera K, Kiepas A, Godet I, Li Y, Mehta P, Ifemembi B, Paul CD, Sen A, Serra SA, Stoletov K, Tao J, Shatkin G, Lee SJ, Zhang Y, Boen A, ... ... Feinberg AP, et al. Extracellular fluid viscosity enhances cell migration and cancer dissemination. Nature. PMID 36323783 DOI: 10.1038/s41586-022-05394-6  0.121
2024 Schrott R, Feinberg JI, Newschaffer CJ, Hertz-Picciotto I, Croen LA, Fallin MD, Volk HE, Ladd-Acosta C, Feinberg AP. Exposure to air pollution is associated with DNA methylation changes in sperm. Environmental Epigenetics. 10: dvae003. PMID 38559770 DOI: 10.1093/eep/dvae003  0.12
1991 Upadhyaya G, Guba SC, Sih SA, Feinberg AP, Talpaz M, Kantarjian HM, Deisseroth AB, Emerson SG. Interferon-alpha restores the deficient expression of the cytoadhesion molecule lymphocyte function antigen-3 by chronic myelogenous leukemia progenitor cells. The Journal of Clinical Investigation. 88: 2131-6. PMID 1721627 DOI: 10.1172/JCI115543  0.118
2016 McIntyre ABR, Rizzardi L, Yu AM, Alexander N, Rosen GL, Botkin DJ, Stahl SE, John KK, Castro-Wallace SL, McGrath K, Burton AS, Feinberg AP, Mason CE. Nanopore sequencing in microgravity. Npj Microgravity. 2: 16035. PMID 28725742 DOI: 10.1038/npjmgrav.2016.35  0.114
2005 Wangler MF, An P, Feinberg AP, Province M, Debaun MR. Inheritance pattern of Beckwith-Wiedemann syndrome is heterogeneous in 291 families with an affected proband. American Journal of Medical Genetics. Part A. 137: 16-21. PMID 16007611 DOI: 10.1002/Ajmg.A.30827  0.114
2022 Gao RD, Maeda M, Tallon C, Feinberg AP, Slusher BS, Tsukamoto T. Effects of 6-Aminonicotinic Acid Esters on the Reprogrammed Epigenetic State of Distant Metastatic Pancreatic Carcinoma. Acs Medicinal Chemistry Letters. 13: 1892-1897. PMID 36518700 DOI: 10.1021/acsmedchemlett.2c00404  0.108
1994 Redeker E, Hoovers J, Alders M, Bliek J, de Galan L, Feinberg A, Little P, Westerveld A, Mannens M. A physical map of the short arm of chromosome 11 involved in childhood solid tumours and the Beckwith-Wiedemann syndrome Cancer Genetics and Cytogenetics. 77: 168. DOI: 10.1016/0165-4608(94)90307-7  0.107
2021 Teschendorff AE, Feinberg AP. Statistical mechanics meets single-cell biology. Nature Reviews. Genetics. PMID 33875884 DOI: 10.1038/s41576-021-00341-z  0.107
2013 Feinberg AP. A third-generation method reveals cell lineage ancestry. Nature Methods. 10: 117-8. PMID 23361091 DOI: 10.1038/nmeth.2338  0.104
2005 Wangler MF, Chang AS, Moley KH, Feinberg AP, Debaun MR. Factors associated with preterm delivery in mothers of children with Beckwith-Wiedemann syndrome: a case cohort study from the BWS registry. American Journal of Medical Genetics. Part A. 134: 187-91. PMID 15723285 DOI: 10.1002/Ajmg.A.30595  0.095
2014 Feinberg AP. The nucleolus gets the silent treatment. Cell Stem Cell. 15: 675-6. PMID 25479743 DOI: 10.1016/j.stem.2014.11.017  0.092
2008 Jones PA, Archer TK, Baylin SB, Beck S, Berger S, Bernstein BE, Carpten JD, Clark SJ, Costello JF, Doerge RW, Esteller M, Feinberg AP, Gingeras TR, Greally JM, Henikoff S, et al. Moving AHEAD with an international human epigenome project Nature. 454: 711-715. PMID 18685699 DOI: 10.1038/454711A  0.089
1979 Feinberg AP, Springer WR, Barondes SH. Segregation of pre-stalk and pre-spore cells of Dictyostelium discoideum: observations consistent with selective cell cohesion. Proceedings of the National Academy of Sciences of the United States of America. 76: 3977-81. PMID 291057 DOI: 10.1073/Pnas.76.8.3977  0.087
1999 Feinberg AP. Mendel stayed home. Genomic imprinting and environmental disease susceptibility, National Institute of Environmental Health Sciences and Duke University Medical Center, Durham, NC, USA, 8-10 October 1998. Trends in Genetics : Tig. 15: 46. PMID 10098405 DOI: 10.1016/S0168-9525(98)01663-1  0.086
2023 Cuomo D, Nitcher M, Barba E, Feinberg AP, Rusyn I, Chiu WA, Threadgill DW. Refining risk estimates for lead in drinking water based on the impact of genetics and diet on blood lead levels using the Collaborative Cross mouse population. Toxicological Sciences : An Official Journal of the Society of Toxicology. PMID 37243727 DOI: 10.1093/toxsci/kfad054  0.084
2003 Chang AS, Feinberg AP, Moley KH, DeBaun MR. Beckwith-Wiedemann Syndrome and assisted reproductive technology Fertility and Sterility. 80: 72. DOI: 10.1016/S0015-0282(03)01994-0  0.079
2017 Barrington WT, Wulfridge P, Wells AE, Rojas CM, Howe SYF, Perry A, Hua K, Pellizzon MA, Hansen KD, Voy BH, Bennett BJ, Pomp D, Feinberg AP, Threadgill DW. Improving Metabolic Health Through Precision Dietetics in Mice. Genetics. PMID 29158425 DOI: 10.1534/Genetics.117.300536  0.074
1977 Feinberg AP, Leahy WR. Infantile spasms: case report of sex-linked inheritance. Developmental Medicine and Child Neurology. 19: 524-6. PMID 892251 DOI: 10.1111/J.1469-8749.1977.TB07949.X  0.07
2000 Feinberg AP. The two-domain hypothesis in Beckwith-Wiedemann syndrome. The Journal of Clinical Investigation. 106: 739-40. PMID 10995782 DOI: 10.1172/JCI10911  0.061
1975 Feinberg AP, Snyder SH. Phenothiazine drugs: structure-activity relationships explained by a conformation that mimics dopamine. Proceedings of the National Academy of Sciences of the United States of America. 72: 1899-903. PMID 239403 DOI: 10.1073/pnas.72.5.1899  0.06
1976 Feinberg AP, Creese I, Snyder SH. The opiate receptor: a model explaining structure-activity relationships of opiate agonists and antagonists. Proceedings of the National Academy of Sciences of the United States of America. 73: 4215-9. PMID 186791 DOI: 10.1073/pnas.73.11.4215  0.055
1976 Creese I, Feinberg AP, Snyder SH. Butyrophenone influences on the opiate receptor. European Journal of Pharmacology. 36: 231-5. PMID 1261596 DOI: 10.1016/0014-2999(76)90277-6  0.052
2003 Sharara N, Holden JT, Wojno TH, Feinberg AS, Grossniklaus HE. Ocular adnexal lymphoid proliferations: clinical, histologic, flow cytometric, and molecular analysis of forty-three cases. Ophthalmology. 110: 1245-54. PMID 12799255 DOI: 10.1016/S0161-6420(03)00330-0  0.043
2013 Fraleigh-Lohrfink KJ, Schneider MV, Whittington D, Feinberg AP. Increase in Science Research Commitment in a Didactic and Laboratory-Based Program Targeted to Gifted Minority High-School Students. Roeper Review. 35: 18-26. PMID 31223183 DOI: 10.1080/02783193.2013.740599  0.04
2010 Wen B, Wu H, Shinkai Y, Irizarry RA, Feinberg AP. Evolutionary flux of canonical micrornAs and mirtrons in Drosophila Nature Genetics. 42: 5-6. DOI: 10.1038/Ng0110-5  0.016
2013 Fraleigh-Lohrfink KJ, Schneider MV, Whittington D, Feinberg AP. Increase in Science Research Commitment in a Didactic and Laboratory-Based Program Targeted to Gifted Minority High-School Students Roeper Review. 35: 18-26. DOI: 10.1080/02783193.2013.740599  0.016
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