George M. Giambasu, Ph.D. - Publications

Affiliations: 
2010 Chemistry University of Minnesota, Twin Cities, Minneapolis, MN 
 2011- Chemistry, Proteomics Rutgers University, New Brunswick, New Brunswick, NJ, United States 
Area:
Physical Chemistry
Website:
http://rci.rutgers.edu/~giambasu/

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Giambasu GM, Case DA, York DM. Predicting site-binding modes of ions and water to nucleic acids using molecular solvation theory. Journal of the American Chemical Society. PMID 30632365 DOI: 10.1021/Jacs.8B11474  1
2015 Panteva MT, Giambaşu GM, York DM. Force Field for Mg(2+), Mn(2+), Zn(2+) and Cd(2+) Ions That Have Balanced Interactions with Nucleic Acids. The Journal of Physical Chemistry. B. PMID 26583536 DOI: 10.1021/Acs.Jpcb.5B10423  1
2015 Gebala M, Giambasu GM, Lipfert J, Bisaria N, Bonilla S, Li G, York DM, Herschlag D. Cation-Anion Interactions within the Nucleic Acid Ion Atmosphere Revealed by Ion Counting Studies. Journal of the American Chemical Society. PMID 26517731 DOI: 10.1021/Jacs.5B08395  0.2
2015 Salmon L, Giambaşu GM, Nikolova EN, Petzold K, Bhattacharya A, Case DA, Al-Hashimi HM. Modulating RNA Alignment Using Directional Dynamic Kinks: Application in Determining an Atomic-Resolution Ensemble for a Hairpin using NMR Residual Dipolar Couplings. Journal of the American Chemical Society. PMID 26306428 DOI: 10.1021/Jacs.5B07229  0.8
2015 Giambaşu GM, Gebala MK, Panteva MT, Luchko T, Case DA, York DM. Competitive interaction of monovalent cations with DNA from 3D-RISM. Nucleic Acids Research. 43: 8405-15. PMID 26304542 DOI: 10.1093/Nar/Gkv830  1
2015 Giamba?u GM, York DM, Case DA. Structural fidelity and NMR relaxation analysis in a prototype RNA hairpin. Rna (New York, N.Y.). 21: 963-74. PMID 25805858 DOI: 10.1261/Rna.047357.114  1
2015 Panteva MT, Giamba?u GM, York DM. Comparison of structural, thermodynamic, kinetic and mass transport properties of Mg(2+) ion models commonly used in biomolecular simulations. Journal of Computational Chemistry. 36: 970-82. PMID 25736394 DOI: 10.1002/Jcc.23881  1
2015 Panteva MT, Dissanayake T, Chen H, Radak BK, Kuechler ER, Giamba?u GM, Lee TS, York DM. Multiscale methods for computational RNA enzymology. Methods in Enzymology. 553: 335-74. PMID 25726472 DOI: 10.1016/Bs.Mie.2014.10.064  1
2014 Heldenbrand H, Janowski PA, Giamba?u G, Giese TJ, Wedekind JE, York DM. Evidence for the role of active site residues in the hairpin ribozyme from molecular simulations along the reaction path. Journal of the American Chemical Society. 136: 7789-92. PMID 24842535 DOI: 10.1021/Ja500180Q  1
2014 Giamba?u GM, Luchko T, Herschlag D, York DM, Case DA. Ion counting from explicit-solvent simulations and 3D-RISM. Biophysical Journal. 106: 883-94. PMID 24559991 DOI: 10.1016/J.Bpj.2014.01.021  0.48
2013 Lee TS, Wong KY, Giambasu GM, York DM. Bridging the gap between theory and experiment to derive a detailed understanding of hammerhead ribozyme catalysis. Progress in Molecular Biology and Translational Science. 120: 25-91. PMID 24156941 DOI: 10.1016/B978-0-12-381286-5.00002-0  1
2013 Giese TJ, Chen H, Dissanayake T, Giamba?u GM, Heldenbrand H, Huang M, Kuechler ER, Lee TS, Panteva MT, Radak BK, York DM. A variational linear-scaling framework to build practical, efficient next-generation orbital-based quantum force fields. Journal of Chemical Theory and Computation. 9: 1417-1427. PMID 23814506 DOI: 10.1021/Ct3010134  1
2012 GiambaÅŸu GM, Lee TS, Scott WG, York DM. Mapping L1 ligase ribozyme conformational switch. Journal of Molecular Biology. 423: 106-22. PMID 22771572 DOI: 10.1016/J.Jmb.2012.06.035  1
2011 Lee TS, Giamba?u G, Harris ME, York DM. Characterization of the Structure and Dynamics of the HDV Ribozyme at Different Stages Along the Reaction Path. The Journal of Physical Chemistry Letters. 2: 2538-2543. PMID 22200005 DOI: 10.1021/Jz201106Y  1
2011 Guza R, Kotandeniya D, Murphy K, Dissanayake T, Lin C, Giambasu GM, Lad RR, Wojciechowski F, Amin S, Sturla SJ, Hudson RH, York DM, Jankowiak R, Jones R, Tretyakova NY. Influence of C-5 substituted cytosine and related nucleoside analogs on the formation of benzo[a]pyrene diol epoxide-dG adducts at CG base pairs of DNA. Nucleic Acids Research. 39: 3988-4006. PMID 21245046 DOI: 10.1093/Nar/Gkq1341  1
2010 Giambasu GM, Lee TS, Sosa CP, Robertson MP, Scott WG, York DM. Identification of dynamical hinge points of the L1 ligase molecular switch. Rna (New York, N.Y.). 16: 769-80. PMID 20167653 DOI: 10.1261/Rna.1897810  1
2010 Lee TS, Giamba?u GM, York DM. Insights into the role of conformational transitions and metal ion binding in RNA catalysis from molecular simulations Annual Reports in Computational Chemistry. 6: 171-200. DOI: 10.1016/S1574-1400(10)06010-X  1
2008 Lee TS, Silva López C, Giambasu GM, Martick M, Scott WG, York DM. Role of Mg2+ in hammerhead ribozyme catalysis from molecular simulation. Journal of the American Chemical Society. 130: 3053-64. PMID 18271579 DOI: 10.1021/Ja076529E  1
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