Yu Shen, Ph.D. - Publications

2004 The University of Nebraska - Lincoln, Lincoln, NE 

44 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Guo W, Huang Q, Liu H, Hou S, Niu S, Jiang Y, Bao X, Shen Y, Fang X. Rational Engineering of Chorismate-Related Pathways in for Improving Tyrosol Production. Frontiers in Bioengineering and Biotechnology. 7: 152. PMID 31334226 DOI: 10.3389/fbioe.2019.00152  0.32
2019 Yang X, Tang H, Song M, Shen Y, Hou J, Bao X. Development of novel surface display platforms for anchoring heterologous proteins in Saccharomyces cerevisiae. Microbial Cell Factories. 18: 85. PMID 31103030 DOI: 10.1186/s12934-019-1133-x  0.32
2018 Wang C, Li H, Xu L, Shen Y, Hou J, Bao X. [Progress in research of pentose transporters and C6/C5 co-metabolic strains in Saccharomyces cerevisiae]. Sheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology. 34: 1543-1555. PMID 30394022 DOI: 10.13345/j.cjb.180031  0.32
2018 Wang J, Zhai H, Rexida R, Shen Y, Hou J, Bao X. Developing synthetic hybrid promoters to increase constitutive or diauxic shift-induced expression in Saccharomyces cerevisiae. Fems Yeast Research. PMID 30203049 DOI: 10.1093/femsyr/foy098  0.32
2018 Tang H, Wang J, Wang S, Shen Y, Petranovic D, Hou J, Bao X. Efficient yeast surface-display of novel complex synthetic cellulosomes. Microbial Cell Factories. 17: 122. PMID 30086751 DOI: 10.1186/s12934-018-0971-2  0.32
2018 Wei S, Liu Y, Wu M, Ma T, Bai X, Hou J, Shen Y, Bao X. Disruption of the transcription factors Thi2p and Nrm1p alleviates the post-glucose effect on xylose utilization in . Biotechnology For Biofuels. 11: 112. PMID 29686730 DOI: 10.1186/s13068-018-1112-1  0.32
2018 Zhang P, Guo JS, Yan P, Chen YP, Wang W, Dai YZ, Fang F, Wang GX, Shen Y. Dynamic dispersal of surface layer biofilm induced by n-TiObased on surface plasmon resonance and waveguide. Applied and Environmental Microbiology. PMID 29500260 DOI: 10.1128/AEM.00047-18  0.32
2018 Yang Z, Shen Y, Li L, Li Z, Wang X, Lu X. Template-Synthesis of Hollow CeO₂ Nanobeads in scCO₂ with Improved Catalytic Activity Towards CO Oxidation. Journal of Nanoscience and Nanotechnology. 18: 2068-2071. PMID 29448714 DOI: 10.1166/jnn.2018.11125  0.32
2018 Chen X, Yang X, Shen Y, Hou J, Bao X. Screening Phosphorylation Site Mutations in Yeast Acetyl-CoA Carboxylase Using Malonyl-CoA Sensor to Improve Malonyl-CoA-Derived Product. Frontiers in Microbiology. 9: 47. PMID 29422886 DOI: 10.3389/fmicb.2018.00047  0.32
2018 Wang JH, Li HY, Chen YP, Liu SY, Yan P, Shen Y, Guo JS, Fang F. Estimation of oxygen effective diffusion coefficient in a non-steady-state biofilm based on response time. Environmental Science and Pollution Research International. PMID 29372520 DOI: 10.1007/s11356-018-1227-8  0.32
2017 Gao JM, Chen XL, Sun XQ, Zhang K, Chen YP, Guo JS, Shen Y. Occurrence of organotins in the aquatic environment during an operating cycle of the Three Gorges Reservoir, China. Environmental Science and Pollution Research International. PMID 29101698 DOI: 10.1007/s11356-017-0585-y  0.32
2017 Wang JH, Chen YP, Dong Y, Wang XX, Guo JS, Shen Y, Yan P, Ma TF, Sun XQ, Fang F, Wang J. A new method to measure and model dynamic oxygen microdistributions in moving biofilms. Environmental Pollution (Barking, Essex : 1987). 229: 199-209. PMID 28599204 DOI: 10.1016/j.envpol.2017.05.062  0.32
2017 Hou J, Qiu C, Shen Y, Li H, Bao X. Engineering of Saccharomyces cerevisiae for the efficient co-utilization of glucose and xylose. Fems Yeast Research. PMID 28582494 DOI: 10.1093/femsyr/fox034  0.32
2017 Zhang P, Chen YP, Peng MW, Guo JS, Shen Y, Yan P, Zhou QH, Jiang J, Fang F. Extracellular polymeric substances dependence of surface interactions of Bacillus subtilis with Cd(2+) and Pb(2+): An investigation combined with surface plasmon resonance and infrared spectra. Colloids and Surfaces. B, Biointerfaces. 154: 357-364. PMID 28365425 DOI: 10.1016/j.colsurfb.2017.03.046  0.32
2017 Wang X, Liang Z, Hou J, Shen Y, Bao X. The Absence of the Transcription Factor Yrr1p, Identified from Comparative Genome Profiling, Increased Vanillin Tolerance Due to Enhancements of ABC Transporters Expressing, rRNA Processing and Ribosome Biogenesis in Saccharomyces cerevisiae. Frontiers in Microbiology. 8: 367. PMID 28360888 DOI: 10.3389/fmicb.2017.00367  0.32
2016 Yan P, Qin R, Guo J, Yu Q, Li Z, Chen YP, Shen Y, Fang F. A net-zero energy model for sustainable wastewater treatment. Environmental Science & Technology. PMID 27943674 DOI: 10.1021/acs.est.6b04735  0.32
2016 Li H, Shen Y, Wu M, Hou J, Jiao C, Li Z, Liu X, Bao X. Engineering a wild-type diploid Saccharomyces cerevisiae strain for second-generation bioethanol production. Bioresources and Bioprocessing. 3: 51. PMID 27942436 DOI: 10.1186/s40643-016-0126-4  0.32
2016 Chen L, Wang M, Hou J, Fu J, Shen Y, Liu F, Zhang Z, Bao X. HAL2 overexpression induces iron acquisition in bdf1Δ cells and enhances their salt resistance. Current Genetics. PMID 27387517 DOI: 10.1007/s00294-016-0628-9  0.32
2016 Zeng J, Gao JM, Chen YP, Yan P, Dong Y, Shen Y, Guo JS, Zeng N, Zhang P. Composition and aggregation of extracellular polymeric substances (EPS) in hyperhaline and municipal wastewater treatment plants. Scientific Reports. 6: 26721. PMID 27220287 DOI: 10.1038/srep26721  0.32
2016 Shin AY, Han YJ, Baek A, Ahn T, Kim SY, Nguyen TS, Son M, Lee KW, Shen Y, Song PS, Kim JI. Evidence that phytochrome functions as a protein kinase in plant light signalling. Nature Communications. 7: 11545. PMID 27173885 DOI: 10.1038/ncomms11545  0.36
2016 Tang H, Wang S, Wang J, Song M, Xu M, Zhang M, Shen Y, Hou J, Bao X. N-hypermannose glycosylation disruption enhances recombinant protein production by regulating secretory pathway and cell wall integrity in Saccharomyces cerevisiae. Scientific Reports. 6: 25654. PMID 27156860 DOI: 10.1038/srep25654  0.32
2016 Wang X, Liang Z, Hou J, Bao X, Shen Y. Identification and functional evaluation of the reductases and dehydrogenases from Saccharomyces cerevisiae involved in vanillin resistance. Bmc Biotechnology. 16: 31. PMID 27036139 DOI: 10.1186/s12896-016-0264-y  0.32
2016 Zhao J, Bao X, Li C, Shen Y, Hou J. Improving monoterpene geraniol production through geranyl diphosphate synthesis regulation in Saccharomyces cerevisiae. Applied Microbiology and Biotechnology. PMID 26883346 DOI: 10.1007/s00253-016-7375-1  0.32
2015 Yan P, Ji FY, Wang J, Chen YP, Shen Y, Fang F, Guo JS. Investigation into cyclic utilization of carbon source in an advanced sludge reduction, inorganic solids separation, phosphorus recovery, and enhanced nutrient removal (SIPER) wastewater treatment process. Water Science and Technology : a Journal of the International Association On Water Pollution Research. 72: 1628-1634. PMID 26524455 DOI: 10.2166/wst.2015.382  0.32
2015 Petterson MK, Lemaitre MG, Shen Y, Wadhwa P, Hou J, Vasilyeva SV, Kravchenko II, Rinzler AG. On Field-Effect Photovoltaics: Gate Enhancement of the Power Conversion Efficiency in a Nanotube/Silicon-Nanowire Solar Cell. Acs Applied Materials & Interfaces. 7: 21182-7. PMID 26352052 DOI: 10.1021/acsami.5b05010  0.32
2015 Wang C, Bao X, Li Y, Jiao C, Hou J, Zhang Q, Zhang W, Liu W, Shen Y. Data set for cloning and characterization of heterologous transporters in Saccharomyces cerevisiae and identification of important amino acids for xylose utilization. Data in Brief. 4: 119-26. PMID 26217774 DOI: 10.1016/j.dib.2015.05.005  0.32
2015 Dong Y, Fan SQ, Shen Y, Yang JX, Yan P, Chen YP, Li J, Guo JS, Duan XM, Fang F, Liu SY. A Novel Bio-carrier Fabricated Using 3D Printing Technique for Wastewater Treatment. Scientific Reports. 5: 12400. PMID 26202477 DOI: 10.1038/srep12400  0.32
2015 Zhang P, Shen Y, Guo JS, Li C, Wang H, Chen YP, Yan P, Yang JX, Fang F. Extracellular protein analysis of activated sludge and their functions in wastewater treatment plant by shotgun proteomics. Scientific Reports. 5: 12041. PMID 26160685 DOI: 10.1038/srep12041  0.32
2015 Hou J, Shen Y, Jiao C, Ge R, Zhang X, Bao X. Characterization and evolution of xylose isomerase screened from the bovine rumen metagenome in Saccharomyces cerevisiae. Journal of Bioscience and Bioengineering. PMID 26160406 DOI: 10.1016/j.jbiosc.2015.05.014  0.32
2015 Wang C, Bao X, Li Y, Jiao C, Hou J, Zhang Q, Zhang W, Liu W, Shen Y. Cloning and characterization of heterologous transporters in Saccharomyces cerevisiae and identification of important amino acids for xylose utilization. Metabolic Engineering. 30: 79-88. PMID 25944766 DOI: 10.1016/j.ymben.2015.04.007  0.32
2015 Fang Z, Liu X, Chen L, Shen Y, Zhang X, Fang W, Wang X, Bao X, Xiao Y. Identification of a laccase Glac15 from Ganoderma lucidum 77002 and its application in bioethanol production. Biotechnology For Biofuels. 8: 54. PMID 25883681 DOI: 10.1186/s13068-015-0235-x  0.32
2015 Tang H, Bao X, Shen Y, Song M, Wang S, Wang C, Hou J. Engineering protein folding and translocation improves heterologous protein secretion in Saccharomyces cerevisiae. Biotechnology and Bioengineering. PMID 25850421 DOI: 10.1002/bit.25596  0.32
2015 Li H, Wu M, Xu L, Hou J, Guo T, Bao X, Shen Y. Evaluation of industrial Saccharomyces cerevisiae strains as the chassis cell for second-generation bioethanol production. Microbial Biotechnology. 8: 266-74. PMID 25616171 DOI: 10.1111/1751-7915.12245  0.32
2015 Fu J, Hou J, Chen L, Wang M, Shen Y, Zhang Z, Bao X. The yeast BDF1 regulates endocytosis via LSP1 under salt stress. Current Microbiology. 70: 671-8. PMID 25572496 DOI: 10.1007/s00284-014-0773-7  0.32
2015 Chen YP, Ma TF, Hu X, Fang F, Shen Y, Yang JX, Guo JS, Bao ZG, Yan P. Start-up of a combined anaerobic/partial nitritation/anammox process for high-salt mustard wastewater treatment. Applied Biochemistry and Biotechnology. 175: 119-34. PMID 25240848 DOI: 10.1007/s12010-014-1247-x  0.32
2014 Shen Y, Li H, Wang X, Zhang X, Hou J, Wang L, Gao N, Bao X. High vanillin tolerance of an evolved Saccharomyces cerevisiae strain owing to its enhanced vanillin reduction and antioxidative capacity. Journal of Industrial Microbiology & Biotechnology. 41: 1637-45. PMID 25261986 DOI: 10.1007/s10295-014-1515-3  0.32
2014 Chen L, Wang M, Hou J, Liu L, Fu J, Shen Y, Zhang Z, Bao X. Regulation of Saccharomyces cerevisiae MEF1 by Hda1p affects salt resistance of bdf1Δ mutant. Fems Yeast Research. 14: 575-85. PMID 25035869  0.32
2014 Zhang P, Fang F, Chen YP, Shen Y, Zhang W, Yang JX, Li C, Guo JS, Liu SY, Huang Y, Li S, Gao X, Yan P. Composition of EPS fractions from suspended sludge and biofilm and their roles in microbial cell aggregation. Chemosphere. 117: 59-65. PMID 24968163 DOI: 10.1016/j.chemosphere.2014.05.070  0.32
2014 Zhang P, Chen YP, Guo JS, Shen Y, Yang JX, Fang F, Li C, Gao X, Wang GX. Adsorption behavior of tightly bound extracellular polymeric substances on model organic surfaces under different pH and cations with surface plasmon resonance. Water Research. 57: 31-9. PMID 24704902 DOI: 10.1016/j.watres.2014.03.018  0.32
2008 Shen Y, Han YJ, Kim JI, Song PS. Arabidopsis nucleoside diphosphate kinase-2 as a plant GTPase activating protein. Bmb Reports. 41: 645-50. PMID 18823588  0.36
2006 Shen Y, Kim JI, Song PS. Autophosphorylation of Arabidopsis nucleoside diphosphate kinase 2 occurs only on its active histidine residue. Biochemistry. 45: 1946-9. PMID 16460041 DOI: 10.1021/bi051868a  0.52
2005 Shen Y, Kim JI, Song PS. NDPK2 as a signal transducer in the phytochrome-mediated light signaling. The Journal of Biological Chemistry. 280: 5740-9. PMID 15561724 DOI: 10.1074/jbc.M408965200  0.52
2004 Im YJ, Kim JI, Shen Y, Na Y, Han YJ, Kim SH, Song PS, Eom SH. Structural analysis of Arabidopsis thaliana nucleoside diphosphate kinase-2 for phytochrome-mediated light signaling. Journal of Molecular Biology. 343: 659-70. PMID 15465053 DOI: 10.1016/j.jmb.2004.08.054  0.36
2004 Kim JI, Shen Y, Han YJ, Park JE, Kirchenbauer D, Soh MS, Nagy F, Schäfer E, Song PS. Phytochrome phosphorylation modulates light signaling by influencing the protein-protein interaction. The Plant Cell. 16: 2629-40. PMID 15377754 DOI: 10.1105/tpc.104.023879  0.36
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