| Year |
Citation |
Score |
| 2009 |
Kelbauskas L, Yodh J, Woodbury N, Lohr D. Intrinsic promoter nucleosome stability/dynamics variations support a novel targeting mechanism. Biochemistry. 48: 4217-9. PMID 19374398 DOI: 10.1021/Bi900476T |
0.489 |
|
| 2009 |
Kelbauskas L, Woodbury N, Lohr D. DNA sequence-dependent variation in nucleosome structure, stability, and dynamics detected by a FRET-based analysis. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. 87: 323-35. PMID 19234544 DOI: 10.1139/O08-126 |
0.563 |
|
| 2009 |
Lohr D, Wang H, Bash R, Lindsay SM. Recognition imaging of chromatin and chromatin-remodeling complexes in the atomic force microscope. Methods in Molecular Biology (Clifton, N.J.). 464: 123-38. PMID 18951183 DOI: 10.1007/978-1-60327-461-6_8 |
0.753 |
|
| 2008 |
Kelbauskas L, Sun J, Woodbury N, Lohr D. Nucleosomal stability and dynamics vary significantly when viewed by internal versus terminal labels. Biochemistry. 47: 9627-35. PMID 18702521 DOI: 10.1021/Bi8000775 |
0.526 |
|
| 2007 |
Kelbauskas L, Chan N, Bash R, DeBartolo P, Sun J, Woodbury N, Lohr D. Sequence-dependent variations associated with H2A/H2B depletion of nucleosomes. Biophysical Journal. 94: 147-58. PMID 17933873 DOI: 10.1529/Biophysj.107.111906 |
0.775 |
|
| 2007 |
Solis FJ, Bash R, Wang H, Yodh J, Lindsay SA, Lohr D. Properties of nucleosomes in acetylated mouse mammary tumor virus versus 5S arrays. Biochemistry. 46: 5623-34. PMID 17444617 DOI: 10.1021/Bi062116Z |
0.795 |
|
| 2007 |
Lohr D, Bash R, Wang H, Yodh J, Lindsay S. Using atomic force microscopy to study chromatin structure and nucleosome remodeling. Methods (San Diego, Calif.). 41: 333-41. PMID 17309844 DOI: 10.1016/J.Ymeth.2006.08.016 |
0.807 |
|
| 2007 |
Kelbauskas L, Chan N, Bash R, Yodh J, Woodbury N, Lohr D. Sequence-dependent nucleosome structure and stability variations detected by Förster resonance energy transfer. Biochemistry. 46: 2239-48. PMID 17269656 DOI: 10.1021/Bi061289L |
0.773 |
|
| 2006 |
Wang H, Bash R, Lohr D. Two-component atomic force microscopy recognition imaging of complex samples. Analytical Biochemistry. 361: 273-9. PMID 17196924 DOI: 10.1016/J.Ab.2006.11.039 |
0.76 |
|
| 2006 |
Bash R, Wang H, Anderson C, Yodh J, Hager G, Lindsay SM, Lohr D. AFM imaging of protein movements: histone H2A-H2B release during nucleosome remodeling. Febs Letters. 580: 4757-61. PMID 16876789 DOI: 10.1016/J.Febslet.2006.06.101 |
0.784 |
|
| 2006 |
Marcus WD, Wang H, Lohr D, Sierks MR, Lindsay SM. Isolation of an scFv targeting BRG1 using phage display with characterization by AFM. Biochemical and Biophysical Research Communications. 342: 1123-9. PMID 16513088 DOI: 10.1016/J.Bbrc.2006.02.073 |
0.411 |
|
| 2005 |
Wang H, Bash R, Lindsay SM, Lohr D. Solution AFM studies of human Swi-Snf and its interactions with MMTV DNA and chromatin. Biophysical Journal. 89: 3386-98. PMID 16100261 DOI: 10.1529/Biophysj.105.065391 |
0.804 |
|
| 2005 |
Lovullo D, Daniel D, Yodh J, Lohr D, Woodbury NW. A fluorescence resonance energy transfer-based probe to monitor nucleosome structure Analytical Biochemistry. 341: 165-172. PMID 15866541 DOI: 10.1016/J.Ab.2005.03.022 |
0.522 |
|
| 2004 |
Solis FJ, Bash R, Yodh J, Lindsay SM, Lohr D. A statistical thermodynamic model applied to experimental AFM population and location data is able to quantify DNA-histone binding strength and internucleosomal interaction differences between acetylated and unacetylated nucleosomal arrays. Biophysical Journal. 87: 3372-87. PMID 15347582 DOI: 10.1529/Biophysj.103.034744 |
0.802 |
|
| 2004 |
Wang H, Bash R, Yodh JG, Hager G, Lindsay SM, Lohr D. Using atomic force microscopy to study nucleosome remodeling on individual nucleosomal arrays in situ. Biophysical Journal. 87: 1964-71. PMID 15345572 DOI: 10.1529/Biophysj.104.042606 |
0.809 |
|
| 2004 |
Stroh C, Wang H, Bash R, Ashcroft B, Nelson J, Gruber H, Lohr D, Lindsay SM, Hinterdorfer P. Single-molecule recognition imaging microscopy. Proceedings of the National Academy of Sciences of the United States of America. 101: 12503-7. PMID 15314231 DOI: 10.1073/Pnas.0403538101 |
0.738 |
|
| 2003 |
Babendure J, Liddell PA, Bash R, LoVullo D, Schiefer TK, Williams M, Daniel DC, Thompson M, Taguchi AKW, Lohr D, Woodbury NW. Development of a fluorescent probe for the study of nucleosome assembly and dynamics Analytical Biochemistry. 317: 1-11. PMID 12729594 DOI: 10.1016/S0003-2697(03)00085-X |
0.787 |
|
| 2003 |
Bash R, Wang H, Yodh J, Hager G, Lindsay SM, Lohr D. Nucleosomal arrays can be salt-reconstituted on a single-copy MMTV promoter DNA template: their properties differ in several ways from those of comparable 5S concatameric arrays. Biochemistry. 42: 4681-90. PMID 12705831 DOI: 10.1021/Bi026887O |
0.784 |
|
| 2002 |
Wang H, Bash R, Yodh JG, Hager GL, Lohr D, Lindsay SM. Glutaraldehyde modified mica: a new surface for atomic force microscopy of chromatin. Biophysical Journal. 83: 3619-25. PMID 12496129 DOI: 10.1016/S0006-3495(02)75362-9 |
0.79 |
|
| 2002 |
Yodh JG, Woodbury N, Shlyakhtenko LS, Lyubchenko YL, Lohr D. Mapping nucleosome locations on the 208-12 by AFM provides clear evidence for cooperativity in array occupation. Biochemistry. 41: 3565-74. PMID 11888272 DOI: 10.1021/Bi011612E |
0.552 |
|
| 2001 |
Bash RC, Yodh J, Lyubchenko Y, Woodbury N, Lohr D. Population analysis of subsaturated 172-12 nucleosomal arrays by atomic force microscopy detects nonrandom behavior that is favored by histone acetylation and short repeat length. The Journal of Biological Chemistry. 276: 48362-70. PMID 11583994 DOI: 10.1074/Jbc.M104916200 |
0.784 |
|
| 2001 |
Bash RC, Vargason JM, Cornejo S, Ho PS, Lohr D. Intrinsically bent DNA in the promoter regions of the yeast GAAL1-10 and GAL80 genes. The Journal of Biological Chemistry. 276: 861-6. PMID 11013248 DOI: 10.1074/Jbc.M007070200 |
0.745 |
|
| 2000 |
Yodh JG, Lyubchenko YL, Shlyakhtenko LS, Woodbury N, Lohr D. Evidence for nonrandom behavior in 208-12 subsaturated nucleosomal array populations analyzed by AFM. Biochemistry. 38: 15756-63. PMID 10625441 DOI: 10.1021/Bi991034Q |
0.411 |
|
| 2000 |
Feng XZ, Bash R, Balagurumoorthy P, Lohr D, Harrington RE, Lindsay SM. Conformational transition in DNA on a cold surface. Nucleic Acids Research. 28: 593-6. PMID 10606659 DOI: 10.1093/Nar/28.2.593 |
0.732 |
|
| 2000 |
Leuba S, Zlatanova J, Karymov M, Bash R, Liu Y, Lohr D, Harrington R, Lindsay S. The Mechanical Properties of Single Chromatin Fibers Under Tension Single Molecules. 1: 185-192. DOI: 10.1002/1438-5171(200006)1:2<185::Aid-Simo185>3.0.Co;2-8 |
0.779 |
|
| 1997 |
Lohr D. Nucleosome transactions on the promoters of the yeast GAL and PHO genes. The Journal of Biological Chemistry. 272: 26795-8. PMID 9341105 DOI: 10.1074/Jbc.272.43.26795 |
0.369 |
|
| 1996 |
Lohr D, Lopez J. GAL4/GAL80-dependent nucleosome disruption/deposition on the upstream regions of the yeast GAL1-10 and GAL80 genes. The Journal of Biological Chemistry. 270: 27671-8. PMID 7499233 DOI: 10.1074/Jbc.270.46.27671 |
0.461 |
|
| 1993 |
Lohr D. Chromatin structure and regulation of the eukaryotic regulatory gene GAL80. Proceedings of the National Academy of Sciences of the United States of America. 90: 10628-32. PMID 8248154 DOI: 10.1073/Pnas.90.22.10628 |
0.405 |
|
| 1990 |
Rainbow M, Lopez J, Lohr D. The yeast GAL1-10 UAS region readily accepts nucleosomes in vitro. Biochemistry. 28: 7486-90. PMID 2819082 DOI: 10.1021/Bi00444A048 |
0.55 |
|
| 1988 |
Lohr D, Torchia T. Structure of the chromosomal copy of yeast ARS1. Biochemistry. 27: 3961-5. PMID 3137967 DOI: 10.1021/BI00411A011 |
0.332 |
|
| 1985 |
Lohr D. Organization of the GAL1-GAL10 intergenic control region chromatin. Nucleic Acids Research. 12: 8457-74. PMID 6095201 DOI: 10.1093/Nar/12.22.8457 |
0.449 |
|
| 1985 |
Lohr D, Hopper JE. The relationship of regulatory proteins and DNase I hypersensitive sites in the yeast GAL1-10 genes Nucleic Acids Research. 13: 8409-8423. PMID 3909104 DOI: 10.1093/Nar/13.23.8409 |
0.314 |
|
| 1983 |
Lohr D. A protected region upstream and limited nucleosomal positioning downstream of the transcription initiation region of the yeast 35S ribosomal gene. Biochemistry. 22: 4527-34. PMID 6354261 DOI: 10.1021/BI00288A027 |
0.334 |
|
| 1983 |
Lohr D. The chromatin structure of an actively expressed, single copy yeast gene. Nucleic Acids Research. 11: 6755-73. PMID 6314257 DOI: 10.1093/Nar/11.19.6755 |
0.503 |
|
| 1983 |
Lohr D. Chromatin structure differs between coding and upstream flanking sequences of the yeast 35S ribosomal genes. Biochemistry. 22: 927-34. PMID 6301531 DOI: 10.1021/BI00273A034 |
0.337 |
|
| 1980 |
Van Holde KE, Allen JR, Tatchell K, Weischet WO, Lohr D. DNA-histone interactions in nucleosomes. Biophysical Journal. 32: 271-282. PMID 6788105 DOI: 10.1016/S0006-3495(80)84956-3 |
0.473 |
|
| 1980 |
Lohr D, Hereford L. Yeast chromatin is uniformly digested by DNase-I. Proceedings of the National Academy of Sciences of the United States of America. 76: 4285-8. PMID 388438 DOI: 10.1073/PNAS.76.9.4285 |
0.422 |
|
| 1979 |
Lohr D, Van Holde KE. Organization of spacer DNA in chromatin Proceedings of the National Academy of Sciences of the United States of America. 76: 6326-6330. PMID 392519 |
0.371 |
|
| 1979 |
Lohr D, Ide G. Comparison on the structure and transcriptional capability of growing phase and stationary yeast chromatin: a model for reversible gene activation. Nucleic Acids Research. 6: 1909-27. PMID 377235 DOI: 10.1093/NAR/6.5.1909 |
0.323 |
|
| 1977 |
Lohr D, Tatchell K, Van Holde KE. On the occurrence of nucleosome phasing in chromatin Cell. 12: 829-836. PMID 336221 DOI: 10.1016/0092-8674(77)90281-1 |
0.416 |
|
| 1977 |
Lohr D, Kovacic RT, Van Holde KE. Quantitative analysis of the digestion of yeast chromatin by staphylococcal nuclease Biochemistry. 16: 463-471. PMID 319824 |
0.308 |
|
| 1977 |
Lohr D, Corden J, Tatchell K, Kovacic RT, Van Holde KE. Comparative subunit structure of HeLa, yeast, and chicken erythrocyte chromatin Proceedings of the National Academy of Sciences of the United States of America. 74: 79-83. PMID 319461 DOI: 10.1073/pnas.74.1.79 |
0.391 |
|
| 1975 |
Lohr D, Van Holde KE. Yeast chromatin subunit structure Science. 188: 165-166. PMID 1090006 |
0.401 |
|
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