Douglas T. Browne - Related publications

Worcester Polytechnic Institute, Worcester, MA, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Campomizzi CS, Ghanatios GE, Estrada DF. F-NMR reveals substrate specificity of CYP121A1 in Mycobacterium tuberculosis. The Journal of Biological Chemistry. 101287. PMID 34634307 DOI: 10.1016/j.jbc.2021.101287   
2021 Park W, Son HF, Lee D, Kim IK, Kim KJ. Crystal Structure and Functional Characterization of the Bifunctional -(5'-Phosphoribosyl)anthranilate Isomerase-indole-3-glycerol-phosphate Synthase from . Journal of Agricultural and Food Chemistry. PMID 34657425 DOI: 10.1021/acs.jafc.1c05132   
2021 Cui J, Chen H, Tang X, Zhang H, Chen YQ, Chen W. Consensus mutagenesis and computational simulation provide insight into the desaturation catalytic mechanism for delta 6 fatty acid desaturase. Biochemical and Biophysical Research Communications. 586: 74-80. PMID 34837835 DOI: 10.1016/j.bbrc.2021.11.050   
2021 Salvi P, Kumar B, Kamble NU, Hazra A, Majee M. A Conserved NAG motif is critical to the catalytic activity of galactinol synthase, a key regulatory enzyme of RFO biosynthesis. The Biochemical Journal. PMID 34693969 DOI: 10.1042/BCJ20210703   
2021 Arif T, Currie MJ, Dobson RCJ, Newson HL, Poonthiyil V, Fairbanks AJ, North RA, Rendle PM. Synthesis of N-acetylmannosamine-6-phosphate derivatives to investigate the mechanism of N-acetylmannosamine-6-phosphate 2-epimerase. Carbohydrate Research. 510: 108445. PMID 34607125 DOI: 10.1016/j.carres.2021.108445   
2021 Chang HY, Lo LH, Lan YH, Hong MX, Chan YT, Ko TP, Huang YR, Cheng TH, Liaw CC. Structural insights into the substrate selectivity of α-oxoamine synthases from marine Vibrio sp. QWI-06. Colloids and Surfaces. B, Biointerfaces. 112224. PMID 34838420 DOI: 10.1016/j.colsurfb.2021.112224   
2021 Guimarães AVF, Frota NF, Lourenzoni MR. Molecular dynamics simulations of human L-asparaginase1: Insights into structural determinants of enzymatic activity. Journal of Molecular Graphics & Modelling. 109: 108007. PMID 34461521 DOI: 10.1016/j.jmgm.2021.108007   
2021 Xue SW, Tian YX, Pan JC, Liu YN, Ma YL. Binding interaction of a ring-hydroxylating dioxygenase with fluoranthene in Pseudomonas aeruginosa DN1. Scientific Reports. 11: 21317. PMID 34716364 DOI: 10.1038/s41598-021-00783-9   
2021 Paavola JL, Battistin U, Ogata CM, Georgiadis MM. Crystal structures of a dodecameric multicopper oxidase from Marinithermus hydrothermalis. Acta Crystallographica. Section D, Structural Biology. 77: 1336-1345. PMID 34605435 DOI: 10.1107/S205979832100944X   
2021 Gavgani HN, Fawaz R, Ehyaei N, Walls D, Pawlowski K, Fulgos R, Park S, Assar Z, Ghanbarpour A, Geiger JH. A structural explanation for the mechanism and specificity of plant branching enzymes I and IIb. The Journal of Biological Chemistry. 101395. PMID 34762912 DOI: 10.1016/j.jbc.2021.101395   
2021 Valenzuela-Chavira I, Corona-Martinez DO, Garcia-Orozco KD, Beltran-Torres M, Sanchez-Lopez F, Arvizu-Flores AA, Sugich-Miranda R, Lopez-Zavala AA, Robles-Zepeda RE, Islas-Osuna MA, Ochoa-Leyva A, Toney MD, Serrano-Posada H, Sotelo-Mundo RR. A Novel Glutathione -Transferase Gtt2 Class (VpGSTT2) Is Found in the Genome of the AHPND/EMS Shrimp Pathogen. Toxins. 13. PMID 34564668 DOI: 10.3390/toxins13090664   
2021 Maruyama S, Sawano K, Amaki S, Suzuki T, Narita S, Kimura K, Arakawa T, Yamada C, Ito Y, Dohmae N, Fujita K, Ishiwata A, Fushinobu S. Substrate complex structure, active site labeling and catalytic role of the zinc ion in cysteine glycosidase. Glycobiology. PMID 34735571 DOI: 10.1093/glycob/cwab103   
2021 Wang L, Wang Y, Chang S, Gao Z, Ma J, Wu B, He B, Wei P. Identification and characterization of a thermostable GH11 xylanase from Paenibacillus campinasensis NTU-11 and the distinct roles of its carbohydrate-binding domain and linker sequence. Colloids and Surfaces. B, Biointerfaces. 209: 112167. PMID 34715594 DOI: 10.1016/j.colsurfb.2021.112167   
2021 Nguyen TNT, Chataway T, Araujo R, Puri M, Franco CMM. Purification and Characterization of a Novel Alginate Lyase from a Marine Species Isolated from Seaweed. Marine Drugs. 19. PMID 34822461 DOI: 10.3390/md19110590   
2021 Dohnálek J, Dušková J, Tishchenko G, Kolenko P, Skálová T, Novák P, Fejfarová K, Šimůnek J. Chitinase Chit62J4 Essential for Chitin Processing by Human Microbiome Bacterium J4. Molecules (Basel, Switzerland). 26. PMID 34641521 DOI: 10.3390/molecules26195978   
2021 Sun Z, Palzkill T. Deep Mutational Scanning Reveals the Active-Site Sequence Requirements for the Colistin Antibiotic Resistance Enzyme MCR-1. Mbio. e0277621. PMID 34781730 DOI: 10.1128/mBio.02776-21   
2021 Nakamura S, Nihira T, Kurata R, Nakai H, Funane K, Park EY, Miyazaki T. Structure of a bacterial α-1,2-glucosidase defines mechanisms of hydrolysis and substrate specificity in GH65 family hydrolases. The Journal of Biological Chemistry. 101366. PMID 34728215 DOI: 10.1016/j.jbc.2021.101366   
2021 Tani I, Ito S, Shirahata Y, Matsuyama Y, Omichinski JG, Shimohigashi Y, Kamada R, Sakaguchi K. Role of active site arginine residues in substrate recognition by PPM1A. Biochemical and Biophysical Research Communications. 581: 1-5. PMID 34637963 DOI: 10.1016/j.bbrc.2021.10.001   
2021 Battiston CSZ, Ficanha AMM, Oro CED, Dallago RM, Mignoni ML. In Situ Calb Enzyme Immobilization in Mesoporous Material Type MCM-48 Synthesis Using Ionic Solid [CMI]Cl as Structure-Directing Agent. Applied Biochemistry and Biotechnology. PMID 34524635 DOI: 10.1007/s12010-021-03648-z   
2021 Pan X, Yang J, Xie P, Zhang J, Ke F, Guo X, Liang M, Liu L, Wang Q, Gao X. Enhancement of Activity and Thermostability of Keratinase From CCTCC AB2013184 by Directed Evolution With Noncanonical Amino Acids. Frontiers in Bioengineering and Biotechnology. 9: 770907. PMID 34733836 DOI: 10.3389/fbioe.2021.770907   
2021 Fuentes-Ugarte N, Herrera SM, Maturana P, Castro-Fernandez V, Guixé V. Structural and Kinetic Insights Into the Molecular Basis of Salt Tolerance of the Short-Chain Glucose-6-Phosphate Dehydrogenase From . Frontiers in Microbiology. 12: 730429. PMID 34650535 DOI: 10.3389/fmicb.2021.730429   
2021 Zhang YX, Yang JW, Wu YY, Hu XQ, Zhang HB. The stability improvement of dextransucrase by artificial extension modification of the V domain of the enzyme. Enzyme and Microbial Technology. 151: 109919. PMID 34649690 DOI: 10.1016/j.enzmictec.2021.109919   
2021 Li W, Song Y, Sun W, Yang X, Liu X, Sun L. Both Acidic pH Value and Binding Interactions of Tartaric Acid With α-Glucosidase Cause the Enzyme Inhibition: The Mechanism in α-Glucosidase Inhibition of Four Caffeic and Tartaric Acid Derivates. Frontiers in Nutrition. 8: 766756. PMID 34692755 DOI: 10.3389/fnut.2021.766756   
2021 Jin LQ, Jin YT, Zhang JW, Liu ZQ, Zheng YG. Enhanced catalytic efficiency and thermostability of glucose isomerase from Thermoanaerobacter ethanolicus via site-directed mutagenesis. Enzyme and Microbial Technology. 152: 109931. PMID 34688091 DOI: 10.1016/j.enzmictec.2021.109931   
2021 Hansen AL, Koivisto JM, Simonsen S, Dong Z, Crehuet R, Hansen DK, Willemoës M. Identification of a Catalytic Nucleophile-Activating Network in the endoαAcetylgalactosaminidase of Family GH101. Biochemistry. PMID 34694774 DOI: 10.1021/acs.biochem.1c00596   
2021 Ni G, Zhong L, Xia C, Zhang L, Dai L, Chen R, Zhao Y, Wang F. Phenylalanine 314 is essential for the activity of maltogenic amylase from Corallococcus sp. EGB. Biotechnology and Applied Biochemistry. PMID 34775631 DOI: 10.1002/bab.2282   
2021 Kim S, Lee J, Oh DB, Kwon O. Marine invertebrate sialyltransferase of the sea squirt Ciona savignyi sialylated core 1 O-linked glycans. International Journal of Biological Macromolecules. PMID 34813786 DOI: 10.1016/j.ijbiomac.2021.11.078   
2021 Yang C, Ma L, Wang X, Xing Y, Lü X. A Novel Polyphenol Oxidoreductase OhLac from sp. J10 for Lignin Degradation. Frontiers in Microbiology. 12: 694166. PMID 34671322 DOI: 10.3389/fmicb.2021.694166   
2021 Shi Q, Chen Y, Li X, Dong H, Chen C, Zhong Z, Yang C, Liu G, Su D. The tetrameric assembly of 2-aminomuconic 6-semialdehyde dehydrogenase is a functional requirement of cofactor NAD binding. Environmental Microbiology. PMID 34806815 DOI: 10.1111/1462-2920.15840   
2021 Ahn WC, An Y, Song KM, Park KH, Lee SJ, Oh BH, Park JT, Woo EJ. Dimeric architecture of maltodextrin glucosidase (MalZ) provides insights into the substrate recognition and hydrolysis mechanism. Biochemical and Biophysical Research Communications. 586: 49-54. PMID 34826700 DOI: 10.1016/j.bbrc.2021.11.070   
2021 Sharma V, Pugazhenthi G, Vasanth D. Production and characterization of a novel thermostable laccase from Bacillus licheniformis VNQ and its application in synthesis of bioactive 1,4-naphthoquinones. Journal of Bioscience and Bioengineering. PMID 34629297 DOI: 10.1016/j.jbiosc.2021.09.008   
2021 Graf SS, Hong S, Müller P, Gennis R, von Ballmoos C. Energy transfer between the nicotinamide nucleotide transhydrogenase and ATP synthase of Escherichia coli. Scientific Reports. 11: 21234. PMID 34707181 DOI: 10.1038/s41598-021-00651-6   
2021 Tang K, Cui Y, Xiao J, Ding M, Chao H, Wu J, Han Z, Liu J, Li X, Yan D. Molecular cloning and characterization of a novel xylanase from Microbacterium imperiale YD-01. Journal of Food Biochemistry. e13988. PMID 34730252 DOI: 10.1111/jfbc.13988   
2021 Chirgadze YN, Battaile KP, Likhachev IV, Balabaev NK, Gordon RD, Romanov V, Lin A, Karisch R, Lam R, Ruzanov M, Brazhnikov EV, Pai EF, Neel BG, Chirgadze NY. Signal transfer in human protein tyrosine phosphatase PTP1B from allosteric inhibitor P00058. Journal of Biomolecular Structure & Dynamics. 1-10. PMID 34705594 DOI: 10.1080/07391102.2021.1994879   
2021 Wei X, Matsuyama T, Sato H, Yan D, Chan PM, Miyamoto K, Uchiyama M, Matsuda Y. Molecular and Computational Bases for Spirofuranone Formation in Setosusin Biosynthesis. Journal of the American Chemical Society. PMID 34644070 DOI: 10.1021/jacs.1c08336   
2021 Tagami T, Chen M, Furunaga Y, Kikuchi A, Sadahiro J, Lang W, Okuyama M, Tanaka Y, Iwasaki T, Yao M, Kimura A. Structural insights reveal the second base catalyst of isomaltose glucohydrolase. The Febs Journal. PMID 34665923 DOI: 10.1111/febs.16237   
2021 Bhattacharyya R, Mukhopadhyay D, Nagarakshita VK, Bhattacharya S, Das A. Thermostable and organic solvent-tolerant acid pectinase from FP6: purification, characterization and evaluation of its phytopigment extraction potential. 3 Biotech. 11: 487. PMID 34790511 DOI: 10.1007/s13205-021-03033-x   
2021 Bhattacharyya M, Basu S, Dhar R, Dutta TK. Phthalate hydrolase: distribution, diversity and molecular evolution. Environmental Microbiology Reports. PMID 34816599 DOI: 10.1111/1758-2229.13028   
2021 Griffiths WA, Spencer KD, Thoden JB, Holden HM. Biochemical Investigation of an N-acetyltransferase from Helicobacter pullorum. Protein Science : a Publication of the Protein Society. PMID 34651380 DOI: 10.1002/pro.4207   
2021 Kim SY, Kim H, Kim YJ, Jung DH, Seo DH, Jung JH, Park CS. Enzymatic analysis of truncation mutants of a type II pullulanase from Bifidobacterium adolescentis P2P3, a resistant starch-degrading gut bacterium. International Journal of Biological Macromolecules. PMID 34740684 DOI: 10.1016/j.ijbiomac.2021.10.193   
2021 Nowak MG, Skwarecki AS, Milewska MJ. Amino Acid Based Antimicrobial Agents - Synthesis and Properties. Chemmedchem. PMID 34596961 DOI: 10.1002/cmdc.202100503   
2021 Lee H, Lee EM, Reginald SS, Chang IS. Peptide sequence-driven direct electron transfer properties and binding behaviors of gold-binding peptide-fused glucose dehydrogenase on electrode. Iscience. 24: 103373. PMID 34816106 DOI: 10.1016/j.isci.2021.103373   
2021 Giri P, Pagar AD, Patil MD, Yun H. Chemical modification of enzymes to improve biocatalytic performance. Biotechnology Advances. 107868. PMID 34774927 DOI: 10.1016/j.biotechadv.2021.107868   
2021 Santos GPCD, Assis CRD, Oliveira VM, Cahu TB, Silva VL, Santos JF, Yogui GT, Bezerra RS. Acetylcholinesterase from the charru mussel Mytella charruana: kinetic characterization, physicochemical properties and potential as in vitro biomarker in environmental monitoring of mollusk extraction areas. Comparative Biochemistry and Physiology. Toxicology & Pharmacology : Cbp. 252: 109225. PMID 34744030 DOI: 10.1016/j.cbpc.2021.109225   
2021 Roger M, Reed TCP, Sargent F. Harnessing Escherichia coli for Bio-Based Production of Formate under Pressurized H and CO Gases. Applied and Environmental Microbiology. 87: e0029921. PMID 34647819 DOI: 10.1128/AEM.00299-21   
2021 Yu L, Zhou W, She Y, Ma H, Cai YS, Jiang M, Deng Z, Price NPJ, Chen W. Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system. Nature Communications. 12: 6633. PMID 34789759 DOI: 10.1038/s41467-021-26928-y   
2021 Khan SI, Zada NS, Sahinkaya M, Nigar Colak D, Ahmed S, Hasan F, Belduz AO, Çanakçi S, Khan S, Badshah M, Shah AA. Cloning, expression and biochemical characterization of lignin-degrading DyP-type peroxidase from Bacillus sp. Strain BL5. Enzyme and Microbial Technology. 151: 109917. PMID 34649688 DOI: 10.1016/j.enzmictec.2021.109917   
2021 Venkatachalam KV, Ettrich RH. Role of aspartic acid residues D87 and D89 in APS kinase domain of human 3'-phosphoadenosine 5'-phosphosulfate synthase 1 and 2b: A commonality with phosphatases/kinases. Biochemistry and Biophysics Reports. 28: 101155. PMID 34712849 DOI: 10.1016/j.bbrep.2021.101155   
2021 Chen Y, Zhang D, Zhang X, Wang Z, Liu CF, Tam JP. Site-Specific Protein Modifications by an Engineered Asparaginyl Endopeptidase from . Frontiers in Chemistry. 9: 768854. PMID 34746098 DOI: 10.3389/fchem.2021.768854   
2021 Song H, Zhao G, Zhang M, Bi R, Meng X, Song J, Wang B, Liu J, Liu L, Lyu Y, Zhang X. Optimization of the UDP-Xyl biocatalytic synthesis from Crassostrea gigas by orthogonal design method. Protein Expression and Purification. 190: 106002. PMID 34666163 DOI: 10.1016/j.pep.2021.106002