A. James Link, Ph.D. - Publications

chemical and biological engineering Princeton University, Princeton, NJ 
protein engineering, natural products

134 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Cheung WL, Chen MY, Maksimov MO, Link AJ. Lasso Peptide Biosynthetic Protein LarB1 Binds Both Leader and Core Peptide Regions of the Precursor Protein LarA. Acs Central Science. 2: 702-709. PMID 27800552 DOI: 10.1021/acscentsci.6b00184  0.44
2016 Arnaudo AM, Link AJ, Garcia BA. Bioorthogonal Chemistry for the Isolation and Study of Newly Synthesized Histones and their Modifications. Acs Chemical Biology. PMID 26789204 DOI: 10.1021/acschembio.5b00816  1
2015 Spencer CT, Bezbradica JS, Ramos MG, Arico CD, Conant SB, Gilchuk P, Gray JJ, Zheng M, Niu X, Hildebrand W, Link AJ, Joyce S. Viral infection causes a shift in the self peptide repertoire presented by human MHC class I molecules. Proteomics. Clinical Applications. 9: 1035-52. PMID 26768311 DOI: 10.1002/prca.201500106  1
2015 Link AJ. Focus on Immunology and Proteomics. Proteomics. Clinical Applications. 9: 965-6. PMID 26768310 DOI: 10.1002/prca.201570063  1
2015 Zong C, Maksimov MO, Link AJ. Construction of Lasso Peptide Fusion Proteins. Acs Chemical Biology. PMID 26492187 DOI: 10.1021/acschembio.5b00745  0.88
2015 Rüger N, Roatsch M, Emmrich T, Franz H, Schüle R, Jung M, Link A. Tetrazolylhydrazides as Selective Fragment-Like Inhibitors of the JumonjiC-Domain-Containing Histone Demethylase KDM4A. Chemmedchem. 10: 1875-83. PMID 26337137 DOI: 10.1002/cmdc.201500335  0.88
2015 Pöss J, Fuernau G, Denks D, Desch S, Eitel I, de Waha S, Link A, Schuler G, Adams V, Böhm M, Thiele H. Angiopoietin-2 in acute myocardial infarction complicated by cardiogenic shock-a biomarker substudy of the IABP-SHOCK II-Trial. European Journal of Heart Failure. PMID 26333723 DOI: 10.1002/ejhf.342  0.88
2015 Samir P, Rahul, Slaughter JC, Link AJ. Environmental Interactions and Epistasis Are Revealed in the Proteomic Responses to Complex Stimuli. Plos One. 10: e0134099. PMID 26247773 DOI: 10.1371/journal.pone.0134099  1
2015 Link AJ. Biosynthesis: Leading the way to RiPPs. Nature Chemical Biology. 11: 551-2. PMID 26196773 DOI: 10.1038/nchembio.1862  0.88
2015 Galassie AC, Link AJ. Proteomic contributions to our understanding of vaccine and immune responses. Proteomics. Clinical Applications. PMID 26172619 DOI: 10.1002/prca.201500054  1
2015 Futran AS, Kyin S, Shvartsman SY, Link AJ. Mapping the binding interface of ERK and transcriptional repressor Capicua using photocrosslinking. Proceedings of the National Academy of Sciences of the United States of America. PMID 26124095 DOI: 10.1073/pnas.1501373112  0.88
2015 Hoek KL, Samir P, Howard LM, Niu X, Prasad N, Galassie A, Liu Q, Allos TM, Floyd KA, Guo Y, Shyr Y, Levy SE, Joyce S, Edwards KM, Link AJ. A cell-based systems biology assessment of human blood to monitor immune responses after influenza vaccination. Plos One. 10: e0118528. PMID 25706537 DOI: 10.1371/journal.pone.0118528  1
2015 Cremers B, Link A, Werner C, Gorhan H, Simundic I, Matheis G, Scheller B, Böhm M, Laufs U. Pulsatile venoarterial perfusion using a novel synchronized cardiac assist device augments coronary artery blood flow during ventricular fibrillation. Artificial Organs. 39: 77-82. PMID 25511441 DOI: 10.1111/aor.12413  0.88
2015 Pöss J, Ukena C, Kindermann I, Ehrlich P, Fuernau G, Ewen S, Mahfoud F, Kriechbaum S, Böhm M, Link A. Angiopoietin-2 and outcome in patients with acute decompensated heart failure. Clinical Research in Cardiology : Official Journal of the German Cardiac Society. 104: 380-7. PMID 25408112 DOI: 10.1007/s00392-014-0787-y  0.88
2015 Piscotta FJ, Tharp JM, Liu WR, Link AJ. Expanding the chemical diversity of lasso peptide MccJ25 with genetically encoded noncanonical amino acids. Chemical Communications (Cambridge, England). 51: 409-12. PMID 25407838 DOI: 10.1039/c4cc07778d  0.88
2015 Lemmerhirt CJ, Rombach M, Bodtke A, Bednarski PJ, Link A. Oxidation potentials of N-modified derivatives of the analgesic flupirtine linked to potassium KV 7 channel opening activity but not hepatocyte toxicity. Chemmedchem. 10: 368-79. PMID 25392984 DOI: 10.1002/cmdc.201402442  0.88
2014 Fuernau G, Pöss J, Denks D, Desch S, Heine GH, Eitel I, Seiler S, de Waha S, Ewen S, Link A, Schuler G, Adams V, Böhm M, Thiele H. Fibroblast growth factor 23 in acute myocardial infarction complicated by cardiogenic shock: a biomarker substudy of the Intraaortic Balloon Pump in Cardiogenic Shock II (IABP-SHOCK II) trial. Critical Care (London, England). 18: 713. PMID 25528363 DOI: 10.1186/s13054-014-0713-8  0.88
2014 Link AJ, Washburn MP. Analysis of protein composition using multidimensional chromatography and mass spectrometry. Current Protocols in Protein Science / Editorial Board, John E. Coligan ... [Et Al.]. 78: 23.1.1-23.1.25. PMID 25367006 DOI: 10.1002/0471140864.ps2301s78  1
2014 Maksimov MO, Link AJ. Prospecting genomes for lasso peptides. Journal of Industrial Microbiology & Biotechnology. 41: 333-44. PMID 24142336 DOI: 10.1007/s10295-013-1357-4  0.44
2014 Liang X, Xia Z, Niu X, Link A. A weighted classification model for peptide identification 2014 Ieee 4th International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2014. DOI: 10.1109/ICCABS.2014.6863913  1
2013 Futran AS, Link AJ, Seger R, Shvartsman SY. ERK as a model for systems biology of enzyme kinetics in cells. Current Biology : Cb. 23: R972-9. PMID 24200329 DOI: 10.1016/j.cub.2013.09.033  0.44
2013 Maksimov MO, Link AJ. Discovery and characterization of an isopeptidase that linearizes lasso peptides. Journal of the American Chemical Society. 135: 12038-47. PMID 23862624 DOI: 10.1021/ja4054256  0.44
2013 Gilchuk P, Spencer CT, Conant SB, Hill T, Gray JJ, Niu X, Zheng M, Erickson JJ, Boyd KL, McAfee KJ, Oseroff C, Hadrup SR, Bennink JR, Hildebrand W, Edwards KM, ... ... Link AJ, et al. Discovering naturally processed antigenic determinants that confer protective T cell immunity. The Journal of Clinical Investigation. 123: 1976-87. PMID 23543059 DOI: 10.1172/JCI67388  1
2013 Jian L, Niu X, Xia Z, Samir P, Sumanasekera C, Mu Z, Jennings JL, Hoek KL, Allos T, Howard LM, Edwards KM, Weil PA, Link AJ. A novel algorithm for validating peptide identification from a shotgun proteomics search engine. Journal of Proteome Research. 12: 1108-19. PMID 23402659 DOI: 10.1021/pr300631t  1
2013 Spencer CT, Dragovic SM, Conant SB, Gray JJ, Zheng M, Samir P, Niu X, Moutaftsi M, Van Kaer L, Sette A, Link AJ, Joyce S. Sculpting MHC class II-restricted self and non-self peptidome by the class I Ag-processing machinery and its impact on Th-cell responses. European Journal of Immunology. 43: 1162-72. PMID 23386199 DOI: 10.1002/eji.201243087  1
2013 Browne CM, Samir P, Fites JS, Villarreal SA, Link AJ. The yeast eukaryotic translation initiation factor 2B translation initiation complex interacts with the fatty acid synthesis enzyme YBR159W and endoplasmic reticulum membranes. Molecular and Cellular Biology. 33: 1041-56. PMID 23263984 DOI: 10.1128/MCB.00811-12  1
2013 Link A. Contact in the acids II | Kontakt im Sauren II Nachrichten Aus Der Chemie. 61: 468. DOI: 10.1515/nachrchem.2013.61.4.466  0.88
2013 Pan SJ, Cheung WL, Zhang S, Maksimov M, Link AJ. How to tie a peptide knot Acs Symposium Series. 1125: 113-127. DOI: 10.1021/bk-2013-1125.ch007  0.44
2012 Zhang S, Long A, Link AJ. A comparison of two strategies for affinity maturation of a BH3 peptide toward pro-survival Bcl-2 proteins. Acs Synthetic Biology. 1: 89-98. PMID 23651073 DOI: 10.1021/sb200002m  0.44
2012 Dunn MJ, Link AJ. A new associate editor for Proteomics. Proteomics. 12: 2237. PMID 22887943 DOI: 10.1002/pmic.201270094  1
2012 Park EJ, Wagenaar T, Zhang S, Link AJ, Prud'homme RK, Koberstein JT, Turro NJ. Using light to covalently immobilize and pattern nanoparticles onto surfaces. Langmuir : the Acs Journal of Surfaces and Colloids. 28: 10934-41. PMID 22746532 DOI: 10.1021/la302113k  0.44
2012 Zhang S, Chan KH, Prud'homme RK, Link AJ. Synthesis and evaluation of clickable block copolymers for targeted nanoparticle drug delivery. Molecular Pharmaceutics. 9: 2228-36. PMID 22734614 DOI: 10.1021/mp3000748  0.44
2012 Marionneau C, Carrasquillo Y, Norris AJ, Townsend RR, Isom LL, Link AJ, Nerbonne JM. The sodium channel accessory subunit Navβ1 regulates neuronal excitability through modulation of repolarizing voltage-gated K⁺ channels. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 5716-27. PMID 22539834 DOI: 10.1523/JNEUROSCI.6450-11.2012  1
2012 Pan SJ, Rajniak J, Maksimov MO, Link AJ. The role of a conserved threonine residue in the leader peptide of lasso peptide precursors. Chemical Communications (Cambridge, England). 48: 1880-2. PMID 22222556 DOI: 10.1039/c2cc17211a  0.44
2012 Pan SJ, Rajniak J, Cheung WL, Link AJ. Construction of a single polypeptide that matures and exports the lasso peptide microcin J25. Chembiochem : a European Journal of Chemical Biology. 13: 367-70. PMID 22213148 DOI: 10.1002/cbic.201100596  0.44
2012 Liang X, Xia Z, Niu X, Link AJ, Pang L, Wu F, Zhang H. A fuzzy cluster-based algorithm for peptide identification Proceedings - 2012 Ieee International Conference On Bioinformatics and Biomedicine Workshops, Bibmw 2012. 602-609. DOI: 10.1109/BIBMW.2012.6470208  1
2011 Link AJ, LaBaer J. Trichloroacetic acid (TCA) precipitation of proteins. Cold Spring Harbor Protocols. 2011: 993-4. PMID 21807853 DOI: 10.1101/pdb.prot5651  1
2011 Link AJ, LaBaer J. Setup and demonstration of a nanoelectrospray ionization source and tandem mass spectrometry. Cold Spring Harbor Protocols. 2011: 888-91. PMID 21724816 DOI: 10.1101/pdb.prot5638  1
2011 Zhang S, Link AJ. Bcl-2 family interactome analysis using bacterial surface display. Integrative Biology : Quantitative Biosciences From Nano to Macro. 3: 823-31. PMID 21713285 DOI: 10.1039/c1ib00023c  0.44
2011 Abdeljabbar DM, Klein TJ, Link AJ. An engineered methionyl-tRNA synthetase enables azidonorleucine incorporation in methionine prototrophic bacteria. Chembiochem : a European Journal of Chemical Biology. 12: 1699-702. PMID 21671329 DOI: 10.1002/cbic.201100089  0.44
2011 Mushrush DJ, Koteiche HA, Sammons MA, Link AJ, McHaourab HS, Lacy DB. Studies of the mechanistic details of the pH-dependent association of botulinum neurotoxin with membranes. The Journal of Biological Chemistry. 286: 27011-8. PMID 21652698 DOI: 10.1074/jbc.M111.256982  1
2011 Link AJ, Weaver C, Farley A. Affinity capture of TAP-tagged protein complexes: affinity purification step 2. Cold Spring Harbor Protocols. 2011: pdb.prot5607. PMID 21460056 DOI: 10.1101/pdb.prot5607  1
2011 Link AJ, Weaver C, Farley A. IgG affinity capture of TAP-tagged protein complexes from cell extracts: affinity purification step 1. Cold Spring Harbor Protocols. 2011: pdb.prot5606. PMID 21460055 DOI: 10.1101/pdb.prot5606  1
2011 Link AJ, Weaver C, Farley A. Making yeast cell extracts for purifying TAP-tagged protein complexes. Cold Spring Harbor Protocols. 2011: pdb.prot5605. PMID 21460054 DOI: 10.1101/pdb.prot5605  1
2011 Link AJ, Weaver C, Farley A. Growing and harvesting TAP-tagged yeast cells. Cold Spring Harbor Protocols. 2011: pdb.prot5604. PMID 21460053 DOI: 10.1101/pdb.prot5604  1
2011 Zhang S, Prud'homme RK, Link AJ. Block copolymer nanoparticles as nanobeads for the polymerase chain reaction. Nano Letters. 11: 1723-6. PMID 21417430 DOI: 10.1021/nl200271d  0.44
2011 Pan SJ, Link AJ. Sequence diversity in the lasso peptide framework: discovery of functional microcin J25 variants with multiple amino acid substitutions. Journal of the American Chemical Society. 133: 5016-23. PMID 21391585 DOI: 10.1021/ja1109634  0.44
2011 Link AJ, LaBaer J. Off-line desalting of peptide mixtures. Cold Spring Harbor Protocols. 2011: prot5591. PMID 21363955 DOI: 10.1101/pdb.prot5591  1
2011 Samir P, Link AJ. Analyzing the cryptome: uncovering secret sequences. The Aaps Journal. 13: 152-8. PMID 21327597 DOI: 10.1208/s12248-011-9252-2  1
2011 Link AJ, LaBaer J. Solution protein digest. Cold Spring Harbor Protocols. 2011: pdb.prot5569. PMID 21285269 DOI: 10.1101/pdb.prot5569  1
2011 Farley AR, Powell DW, Weaver CM, Jennings JL, Link AJ. Assessing the components of the eIF3 complex and their phosphorylation status. Journal of Proteome Research. 10: 1481-94. PMID 21280672 DOI: 10.1021/pr100877m  1
2011 Sammons MA, Samir P, Link AJ. Saccharomyces cerevisiae Gis2 interacts with the translation machinery and is orthogonal to myotonic dystrophy type 2 protein ZNF9. Biochemical and Biophysical Research Communications. 406: 13-9. PMID 21277287 DOI: 10.1016/j.bbrc.2011.01.086  1
2011 Pan SJ, Cheung WL, Fung HK, Floudas CA, Link AJ. Computational design of the lasso peptide antibiotic microcin J25. Protein Engineering, Design & Selection : Peds. 24: 275-82. PMID 21106549 DOI: 10.1093/protein/gzq108  0.44
2010 Xu BJ, Yan W, Jovanovic B, Shaw AK, An QA, Eng J, Chytil A, Link AJ, Moses HL. Microdialysis combined with proteomics for protein identification in breast tumor microenvironment in vivo. Cancer Microenvironment : Official Journal of the International Cancer Microenvironment Society. 4: 61-71. PMID 21505562 DOI: 10.1007/s12307-010-0046-3  1
2010 Mannoor MS, Zhang S, Link AJ, McAlpine MC. Electrical detection of pathogenic bacteria via immobilized antimicrobial peptides. Proceedings of the National Academy of Sciences of the United States of America. 107: 19207-12. PMID 20956332 DOI: 10.1073/pnas.1008768107  0.44
2010 Umanah GK, Huang L, Ding FX, Arshava B, Farley AR, Link AJ, Naider F, Becker JM. Identification of residue-to-residue contact between a peptide ligand and its G protein-coupled receptor using periodate-mediated dihydroxyphenylalanine cross-linking and mass spectrometry. The Journal of Biological Chemistry. 285: 39425-36. PMID 20923758 DOI: 10.1074/jbc.M110.149500  1
2010 Xu BJ, Yan W, Jovanovic B, An AQ, Cheng N, Aakre ME, Yi Y, Eng J, Link AJ, Moses HL. Quantitative analysis of the secretome of TGF-beta signaling-deficient mammary fibroblasts. Proteomics. 10: 2458-70. PMID 20405477 DOI: 10.1002/pmic.200900701  1
2010 Sammons MA, Antons AK, Bendjennat M, Udd B, Krahe R, Link AJ. ZNF9 activation of IRES-mediated translation of the human ODC mRNA is decreased in myotonic dystrophy type 2. Plos One. 5: e9301. PMID 20174632 DOI: 10.1371/journal.pone.0009301  1
2010 Cheung WL, Pan SJ, Link AJ. Much of the microcin J25 leader peptide is dispensable. Journal of the American Chemical Society. 132: 2514-5. PMID 20143810 DOI: 10.1021/ja910191u  0.44
2010 Pan SJ, Cheung WL, Link AJ. Engineered gene clusters for the production of the antimicrobial peptide microcin J25. Protein Expression and Purification. 71: 200-6. PMID 20035874 DOI: 10.1016/j.pep.2009.12.010  0.44
2009 Link AJ, Labaer J. In-gel trypsin digest of gel-fractionated proteins. Cold Spring Harbor Protocols. 2009: pdb.prot5110. PMID 20147065 DOI: 10.1101/pdb.prot5110  1
2009 Abdeljabbar DM, Klein TJ, Zhang S, Link AJ. A single genomic copy of an engineered methionyl-tRNA synthetase enables robust incorporation of azidonorleucine into recombinant proteins in E. coli. Journal of the American Chemical Society. 131: 17078-9. PMID 19894713 DOI: 10.1021/ja907969m  0.44
2009 Farley AR, Link AJ. Identification and quantification of protein posttranslational modifications. Methods in Enzymology. 463: 725-63. PMID 19892200 DOI: 10.1016/S0076-6879(09)63040-8  1
2009 Sun J, Abdeljabbar DM, Clarke N, Bellows ML, Floudas CA, Link AJ. Reconstitution and engineering of apoptotic protein interactions on the bacterial cell surface. Journal of Molecular Biology. 394: 297-305. PMID 19766123 DOI: 10.1016/j.jmb.2009.09.023  0.88
2009 Marionneau C, LeDuc RD, Rohrs HW, Link AJ, Townsend RR, Nerbonne JM. Proteomic analyses of native brain K(V)4.2 channel complexes. Channels (Austin, Tex.). 3: 284-94. PMID 19713751  1
2009 Tang Y, Wang P, Van Deventer JA, Link AJ, Tirrell DA. Introduction of an aliphatic ketone into recombinant proteins in a bacterial strain that overexpresses an editing-impaired leucyl-tRNA synthetase. Chembiochem : a European Journal of Chemical Biology. 10: 2188-90. PMID 19670197 DOI: 10.1002/cbic.200900407  0.88
2009 Marionneau C, LeDuc RD, Rohrs HW, Link AJ, Townsend RR, Nerbonne JM. Proteomic analyses of native brain KV4.2 channel complexes Channels. 3.  1
2008 Link AJ, Labaer J. Using the Nucleic Acid Programmable Protein Array (NAPPA) for Identifying Protein-Protein Interactions. Protocol 2: Detection of Query Proteins on NAPPA Slides. Csh Protocols. 2008: pdb.prot5109. PMID 21356755 DOI: 10.1101/pdb.prot5109  1
2008 Link AJ, Labaer J. Using the Nucleic Acid Programmable Protein Array (NAPPA) for Identifying Protein-Protein Interactions. Protocol 1: Coexpression of Query Protein on NAPPA Slides. Csh Protocols. 2008: pdb.prot5108. PMID 21356754 DOI: 10.1101/pdb.prot5108  1
2008 Link AJ, Labaer J. Using the Nucleic Acid Programmable Protein Array (NAPPA) for Identifying Protein-Protein Interactions: General Guidelines. Csh Protocols. 2008: pdb.ip62. PMID 21356738 DOI: 10.1101/pdb.ip62  1
2008 Link AJ, Labaer J. Construction of Nucleic Acid Programmable Protein Arrays (NAPPA) 7: Detecting DNA on NAPPA Slides. Csh Protocols. 2008: pdb.prot5062. PMID 21356717 DOI: 10.1101/pdb.prot5062  1
2008 Link AJ, Labaer J. Construction of Nucleic Acid Programmable Protein Arrays (NAPPA) 6: Detecting Proteins on NAPPA Slides. Csh Protocols. 2008: pdb.prot5061. PMID 21356716 DOI: 10.1101/pdb.prot5061  1
2008 Link AJ, Labaer J. Construction of Nucleic Acid Programmable Protein Arrays (NAPPA) 5: Expressing Proteins on NAPPA Slides. Csh Protocols. 2008: pdb.prot5060. PMID 21356715 DOI: 10.1101/pdb.prot5060  1
2008 Link AJ, Labaer J. Construction of Nucleic Acid Programmable Protein Arrays (NAPPA) 4: DNA Biotinylation, Precipitation, and Arraying of Samples. Csh Protocols. 2008: pdb.prot5059. PMID 21356714 DOI: 10.1101/pdb.prot5059  1
2008 Link AJ, Labaer J. Construction of Nucleic Acid Programmable Protein Arrays (NAPPA) 3: Isolating DNA Plasmids in a 96-Well Plate Format. Csh Protocols. 2008: pdb.prot5058. PMID 21356713 DOI: 10.1101/pdb.prot5058  1
2008 Link AJ, Labaer J. Construction of Nucleic Acid Programmable Protein Arrays (NAPPA) 2: Preparing Bacterial Cultures in a 96-Well Format. Csh Protocols. 2008: pdb.prot5057. PMID 21356712 DOI: 10.1101/pdb.prot5057  1
2008 Link AJ, Labaer J. Construction of Nucleic Acid Programmable Protein Arrays (NAPPA) 1: Coating Glass Slides with Amino Silane. Csh Protocols. 2008: pdb.prot5056. PMID 21356711 DOI: 10.1101/pdb.prot5056  1
2008 Link AJ, Labaer J. High-Throughput Cloning of Open Reading Frames (ORFs): Assembling Large Sets of Expression Constructs. Csh Protocols. 2008: pdb.prot5050. PMID 21356688 DOI: 10.1101/pdb.prot5050  1
2008 Burg JS, Powell DW, Chai R, Hughes AL, Link AJ, Espenshade PJ. Insig regulates HMG-CoA reductase by controlling enzyme phosphorylation in fission yeast. Cell Metabolism. 8: 522-31. PMID 19041767 DOI: 10.1016/j.cmet.2008.09.004  1
2008 Osipovich AB, Jennings JL, Lin Q, Link AJ, Ruley HE. Dyggve-Melchior-Clausen syndrome: chondrodysplasia resulting from defects in intracellular vesicle traffic. Proceedings of the National Academy of Sciences of the United States of America. 105: 16171-6. PMID 18852472 DOI: 10.1073/pnas.0804259105  1
2008 Arnett DR, Jennings JL, Tabb DL, Link AJ, Weil PA. A proteomics analysis of yeast Mot1p protein-protein associations: insights into mechanism. Molecular & Cellular Proteomics : McP. 7: 2090-106. PMID 18596064 DOI: 10.1074/mcp.M800221-MCP200  1
2008 Link AJ, Skretas G, Strauch EM, Chari NS, Georgiou G. Efficient production of membrane-integrated and detergent-soluble G protein-coupled receptors in Escherichia coli. Protein Science : a Publication of the Protein Society. 17: 1857-63. PMID 18593817 DOI: 10.1110/ps.035980.108  0.88
2008 Strable E, Prasuhn DE, Udit AK, Brown S, Link AJ, Ngo JT, Lander G, Quispe J, Potter CS, Carragher B, Tirrell DA, Finn MG. Unnatural amino acid incorporation into virus-like particles. Bioconjugate Chemistry. 19: 866-75. PMID 18318461 DOI: 10.1021/bc700390r  1
2008 Yang Z, Browning CF, Hallaq H, Yermalitskaya L, Esker J, Hall MR, Link AJ, Ham AJ, McGrath MJ, Mitchell CA, Murray KT. Four and a half LIM protein 1: a partner for KCNA5 in human atrium. Cardiovascular Research. 78: 449-57. PMID 18281375 DOI: 10.1093/cvr/cvn038  1
2007 Yoo TH, Link AJ, Tirrell DA. Evolution of a fluorinated green fluorescent protein. Proceedings of the National Academy of Sciences of the United States of America. 104: 13887-90. PMID 17717085 DOI: 10.1073/pnas.0701904104  0.88
2007 Link AJ, Vink MK, Tirrell DA. Synthesis of the functionalizable methionine surrogate azidohomoalanine using Boc-homoserine as precursor. Nature Protocols. 2: 1884-7. PMID 17703199 DOI: 10.1038/nprot.2007.269  1
2007 Link AJ, Vink MK, Tirrell DA. Preparation of the functionalizable methionine surrogate azidohomoalanine via copper-catalyzed diazo transfer. Nature Protocols. 2: 1879-83. PMID 17703198 DOI: 10.1038/nprot.2007.268  1
2007 Link AJ, Jeong KJ, Georgiou G. Beyond toothpicks: new methods for isolating mutant bacteria. Nature Reviews. Microbiology. 5: 680-8. PMID 17676054 DOI: 10.1038/nrmicro1715  1
2007 Dieterich DC, Lee JJ, Link AJ, Graumann J, Tirrell DA, Schuman EM. Labeling, detection and identification of newly synthesized proteomes with bioorthogonal non-canonical amino-acid tagging. Nature Protocols. 2: 532-40. PMID 17406607 DOI: 10.1038/nprot.2007.52  1
2007 Bozulic LD, Malik MT, Powell DW, Nanez A, Link AJ, Ramos KS, Dean WL. Plasma membrane Ca(2+) -ATPase associates with CLP36, alpha-actinin and actin in human platelets. Thrombosis and Haemostasis. 97: 587-97. PMID 17393022 DOI: 10.1160/TH06-08-0438  1
2007 Gerbasi VR, Link AJ. The myotonic dystrophy type 2 protein ZNF9 is part of an ITAF complex that promotes cap-independent translation. Molecular & Cellular Proteomics : McP. 6: 1049-58. PMID 17327219 DOI: 10.1074/mcp.M600384-MCP200  1
2007 Hughes AL, Powell DW, Bard M, Eckstein J, Barbuch R, Link AJ, Espenshade PJ. Dap1/PGRMC1 binds and regulates cytochrome P450 enzymes. Cell Metabolism. 5: 143-9. PMID 17276356 DOI: 10.1016/j.cmet.2006.12.009  1
2007 Venkov CD, Link AJ, Jennings JL, Plieth D, Inoue T, Nagai K, Xu C, Dimitrova YN, Rauscher FJ, Neilson EG. A proximal activator of transcription in epithelial-mesenchymal transition. The Journal of Clinical Investigation. 117: 482-91. PMID 17273560 DOI: 10.1172/JCI29544  1
2007 Link AJ, Georgiou G. Advances and challenges in membrane protein expression Aiche Journal. 53: 752-756. DOI: 10.1002/aic.11107  1
2006 Peng R, Hawkins I, Link AJ, Patton JG. The splicing factor PSF is part of a large complex that assembles in the absence of pre-mRNA and contains all five snRNPs. Rna Biology. 3: 69-76. PMID 17114945  1
2006 Yoon HJ, Feoktistova A, Chen JS, Jennings JL, Link AJ, Gould KL. Role of Hcn1 and its phosphorylation in fission yeast anaphase-promoting complex/cyclosome function. The Journal of Biological Chemistry. 281: 32284-93. PMID 16950791 DOI: 10.1074/jbc.M603867200  1
2006 Link AJ, Vink MK, Agard NJ, Prescher JA, Bertozzi CR, Tirrell DA. Discovery of aminoacyl-tRNA synthetase activity through cell-surface display of noncanonical amino acids. Proceedings of the National Academy of Sciences of the United States of America. 103: 10180-5. PMID 16801548 DOI: 10.1073/pnas.0601167103  1
2006 Dieterich DC, Link AJ, Graumann J, Tirrell DA, Schuman EM. Selective identification of newly synthesized proteins in mammalian cells using bioorthogonal noncanonical amino acid tagging (BONCAT). Proceedings of the National Academy of Sciences of the United States of America. 103: 9482-7. PMID 16769897 DOI: 10.1073/pnas.0601637103  1
2006 McAfee KJ, Duncan DT, Assink M, Link AJ. Analyzing proteomes and protein function using graphical comparative analysis of tandem mass spectrometry results. Molecular & Cellular Proteomics : McP. 5: 1497-513. PMID 16707483 DOI: 10.1074/mcp.T500027-MCP200  1
2006 Fleischer TC, Weaver CM, McAfee KJ, Jennings JL, Link AJ. Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes. Genes & Development. 20: 1294-307. PMID 16702403 DOI: 10.1101/gad.1422006  1
2006 Chen T, Jackson CR, Link A, Markey MP, Colligan BM, Douglass LE, Pemberton JO, Deddens JA, Graff JR, Carter JH. Int7G24A variant of transforming growth factor-beta receptor type I is associated with invasive breast cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 12: 392-7. PMID 16428477 DOI: 10.1158/1078-0432.CCR-05-1518  1
2006 Wilkins MR, Appel RD, Van Eyk JE, Chung MC, Görg A, Hecker M, Huber LA, Langen H, Link AJ, Paik YK, Patterson SD, Pennington SR, Rabilloud T, Simpson RJ, Weiss W, et al. Guidelines for the next 10 years of proteomics. Proteomics. 6: 4-8. PMID 16400714 DOI: 10.1002/pmic.200500856  1
2005 Dong J, Lai R, Jennings JL, Link AJ, Hinnebusch AG. The novel ATP-binding cassette protein ARB1 is a shuttling factor that stimulates 40S and 60S ribosome biogenesis. Molecular and Cellular Biology. 25: 9859-73. PMID 16260602 DOI: 10.1128/MCB.25.22.9859-9873.2005  1
2005 Duncan DT, Craig R, Link AJ. Parallel tandem: a program for parallel processing of tandem mass spectra using PVM or MPI and X!Tandem. Journal of Proteome Research. 4: 1842-7. PMID 16212440 DOI: 10.1021/pr050058i  1
2005 Link AJ, Tirrell DA. Reassignment of sense codons in vivo. Methods (San Diego, Calif.). 36: 291-8. PMID 16076455 DOI: 10.1016/j.ymeth.2005.04.005  1
2005 Lominadze G, Powell DW, Luerman GC, Link AJ, Ward RA, McLeish KR. Proteomic analysis of human neutrophil granules. Molecular & Cellular Proteomics : McP. 4: 1503-21. PMID 15985654 DOI: 10.1074/mcp.M500143-MCP200  1
2005 Sung U, Jennings JL, Link AJ, Blakely RD. Proteomic analysis of human norepinephrine transporter complexes reveals associations with protein phosphatase 2A anchoring subunit and 14-3-3 proteins. Biochemical and Biophysical Research Communications. 333: 671-8. PMID 15963952 DOI: 10.1016/j.bbrc.2005.05.165  1
2005 Venkatram S, Jennings JL, Link A, Gould KL. Mto2p, a novel fission yeast protein required for cytoplasmic microtubule organization and anchoring of the cytokinetic actin ring. Molecular Biology of the Cell. 16: 3052-63. PMID 15800064 DOI: 10.1091/mbc.E04-12-1043  1
2005 Link AJ, Fleischer TC, Weaver CM, Gerbasi VR, Jennings JL. Purifying protein complexes for mass spectrometry: applications to protein translation. Methods (San Diego, Calif.). 35: 274-90. PMID 15722224 DOI: 10.1016/j.ymeth.2004.08.019  1
2005 Van Deventer JA, Link AJ, Tang Y, Wang P, Tirrell DA. Incorporation and labeling of an aliphatic ketone in recombinant proteins Aiche Annual Meeting, Conference Proceedings. 8700.  1
2004 Link AJ, Jennings JL, Washburn MP. Analysis of protein composition using multidimensional chromatography and mass spectrometry. Current Protocols in Protein Science / Editorial Board, John E. Coligan ... [Et Al.]. Unit 23.1. PMID 18429262 DOI: 10.1002/0471140864.ps2301s34  1
2004 Lewis PW, Beall EL, Fleischer TC, Georlette D, Link AJ, Botchan MR. Identification of a Drosophila Myb-E2F2/RBF transcriptional repressor complex. Genes & Development. 18: 2929-40. PMID 15545624 DOI: 10.1101/gad.1255204  1
2004 An H, Morrell JL, Jennings JL, Link AJ, Gould KL. Requirements of fission yeast septins for complex formation, localization, and function. Molecular Biology of the Cell. 15: 5551-64. PMID 15385632 DOI: 10.1091/mbc.E04-07-0640  1
2004 Gerbasi VR, Weaver CM, Hill S, Friedman DB, Link AJ. Yeast Asc1p and mammalian RACK1 are functionally orthologous core 40S ribosomal proteins that repress gene expression. Molecular and Cellular Biology. 24: 8276-87. PMID 15340087 DOI: 10.1128/MCB.24.18.8276-8287.2004  1
2004 Link AJ, Vink MK, Tirrell DA. Presentation and detection of azide functionality in bacterial cell surface proteins. Journal of the American Chemical Society. 126: 10598-602. PMID 15327317 DOI: 10.1021/ja047629c  1
2004 Powell DW, Weaver CM, Jennings JL, McAfee KJ, He Y, Weil PA, Link AJ. Cluster analysis of mass spectrometry data reveals a novel component of SAGA. Molecular and Cellular Biology. 24: 7249-59. PMID 15282323 DOI: 10.1128/MCB.24.16.7249-7259.2004  1
2004 Gould KL, Ren L, Feoktistova AS, Jennings JL, Link AJ. Tandem affinity purification and identification of protein complex components. Methods (San Diego, Calif.). 33: 239-44. PMID 15157891 DOI: 10.1016/j.ymeth.2003.11.019  1
2004 Sattlegger E, Swanson MJ, Ashcraft EA, Jennings JL, Fekete RA, Link AJ, Hinnebusch AG. YIH1 is an actin-binding protein that inhibits protein kinase GCN2 and impairs general amino acid control when overexpressed. The Journal of Biological Chemistry. 279: 29952-62. PMID 15126500 DOI: 10.1074/jbc.M404009200  1
2004 Morrell JL, Tomlin GC, Rajagopalan S, Venkatram S, Feoktistova AS, Tasto JJ, Mehta S, Jennings JL, Link A, Balasubramanian MK, Gould KL. Sid4p-Cdc11p assembles the septation initiation network and its regulators at the S. pombe SPB. Current Biology : Cb. 14: 579-84. PMID 15062098 DOI: 10.1016/j.cub.2004.03.036  1
2004 Kobor MS, Venkatasubrahmanyam S, Meneghini MD, Gin JW, Jennings JL, Link AJ, Madhani HD, Rine J. A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin. Plos Biology. 2: E131. PMID 15045029 DOI: 10.1371/journal.pbio.0020131  1
2004 Venkatram S, Tasto JJ, Feoktistova A, Jennings JL, Link AJ, Gould KL. Identification and characterization of two novel proteins affecting fission yeast gamma-tubulin complex function. Molecular Biology of the Cell. 15: 2287-301. PMID 15004232 DOI: 10.1091/mbc.E03-10-0728  1
2003 Link AJ, Tirrell DA. Cell surface labeling of Escherichia coli via copper(I)-catalyzed [3+2] cycloaddition. Journal of the American Chemical Society. 125: 11164-5. PMID 16220915 DOI: 10.1021/ja036765z  1
2003 Link AJ, Mock ML, Tirrell DA. Non-canonical amino acids in protein engineering. Current Opinion in Biotechnology. 14: 603-9. PMID 14662389 DOI: 10.1016/j.copbio.2003.10.011  1
2003 Yik JH, Chen R, Nishimura R, Jennings JL, Link AJ, Zhou Q. Inhibition of P-TEFb (CDK9/Cyclin T) kinase and RNA polymerase II transcription by the coordinated actions of HEXIM1 and 7SK snRNA. Molecular Cell. 12: 971-82. PMID 14580347 DOI: 10.1016/S1097-2765(03)00388-5  1
2003 Li J, Hawkins IC, Harvey CD, Jennings JL, Link AJ, Patton JG. Regulation of alternative splicing by SRrp86 and its interacting proteins. Molecular and Cellular Biology. 23: 7437-47. PMID 14559993 DOI: 10.1128/MCB.23.21.7437-7447.2003  1
2002 Link AJ. Multidimensional peptide separations in proteomics. Trends in Biotechnology. 20: S8-13. PMID 12570153  1
2002 Yoon HJ, Feoktistova A, Wolfe BA, Jennings JL, Link AJ, Gould KL. Proteomics analysis identifies new components of the fission and budding yeast anaphase-promoting complexes. Current Biology : Cb. 12: 2048-54. PMID 12477395 DOI: 10.1016/S0960-9822(02)01331-3  1
2002 Sanders SL, Jennings J, Canutescu A, Link AJ, Weil PA. Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry. Molecular and Cellular Biology. 22: 4723-38. PMID 12052880 DOI: 10.1128/MCB.22.13.4723-4738.2002  1
2002 Squazzo SL, Costa PJ, Lindstrom DL, Kumer KE, Simic R, Jennings JL, Link AJ, Arndt KM, Hartzog GA. The Paf1 complex physically and functionally associates with transcription elongation factors in vivo. The Embo Journal. 21: 1764-74. PMID 11927560 DOI: 10.1093/emboj/21.7.1764  1
2002 Ohi MD, Link AJ, Ren L, Jennings JL, McDonald WH, Gould KL. Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs. Molecular and Cellular Biology. 22: 2011-24. PMID 11884590 DOI: 10.1128/MCB.22.7.2011-2024.2002  1
2002 Friedman DB, Sobrattee S, Ritter C, Arteaga CL, Jennings JL, Link AJ, Caprioli RM. 2D-DIGE and DALPC analysis of receptor tyrosine kinase signaling in human cancer cells Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 221-222.  1
2000 Yates JR, Link AJ, Schieltz D. Direct analysis of proteins in mixtures. Application to protein complexes Methods in Molecular Biology (Clifton, N.J.). 146: 17-26. PMID 10948494  1
2000 Bradley AZ, Link AJ, Biswas K, Kahne D, Schwartz J, Jones M, Zhu Z, Platz MS. Hydrogen abstraction on photolysis of a naphthocarborane Tetrahedron Letters. 41: 8691-8694.  1
1999 Tong W, Link A, Eng JK, Yates JR. Identification off proteins in complexes by solid-phase microextraction/multistep elution/capillary electrophoresis/tandem mass spectrometry Analytical Chemistry. 71: 2270-2278. PMID 10405597  1
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