Cameron Mura, PhD - Publications

Affiliations: 
2008-2018 Chemistry University of Virginia, Charlottesville, VA 
 2018- Biomedical Engineering University of Virginia, Charlottesville, VA 
 2019- Data Science University of Virginia, Charlottesville, VA 
Area:
structural and computational biology; molecular biophysics; molecular interactions; evolution; machine learning
Website:
http://bournelab.org

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Mura C, Veretnik S, Bourne PE. The Urfold: Structural Similarity Just above the Superfold Level? Protein Science : a Publication of the Protein Society. PMID 31599042 DOI: 10.1002/pro.3742  0.68
2019 Tang JD, Mura C, Lampe KJ. A stimuli-responsive, pentapeptide, nanofiber hydrogel for tissue engineering. Journal of the American Chemical Society. PMID 30830776 DOI: 10.1021/jacs.8b13363  1
2018 Youkharibache P, Veretnik S, Li Q, Stanek KA, Mura C, Bourne PE. The Small β-Barrel Domain: A Survey-Based Structural Analysis. Structure (London, England : 1993). PMID 30393050 DOI: 10.1016/j.str.2018.09.012  1
2018 Mura C, Draizen EJ, Bourne PE. Structural biology meets data science: does anything change? Current Opinion in Structural Biology. 52: 95-102. PMID 30267935 DOI: 10.1016/j.sbi.2018.09.003  0.68
2018 Stanek KA, Mura C. Producing Hfq/Sm Proteins and sRNAs for Structural and Biophysical Studies of Ribonucleoprotein Assembly. Methods in Molecular Biology (Clifton, N.J.). 1737: 273-299. PMID 29484599 DOI: 10.1007/978-1-4939-7634-8_16  1
2017 Stanek KA, Patterson-West J, Randolph PS, Mura C. Crystal structure and RNA-binding properties of an Hfq homolog from the deep-branching Aquificae: conservation of the lateral RNA-binding mode. Acta Crystallographica. Section D, Structural Biology. 73: 294-315. PMID 28375142 DOI: 10.1107/S2059798317000031  1
2016 Tang JD, McAnany CE, Mura C, Lampe KJ. Toward a Designable Extracellular Matrix: Molecular Dynamics Simulations of an Engineered Laminin-mimetic, Elastin-like Fusion Protein. Biomacromolecules. PMID 27627061 DOI: 10.1021/acs.biomac.6b00951  1
2016 Ekmekci B, McAnany CE, Mura C. An Introduction to Programming for Bioscientists: A Python-Based Primer. Plos Computational Biology. 12: e1004867. PMID 27271528 DOI: 10.1371/journal.pcbi.1004867  1
2016 McAnany CE, Mura C. Claws, Disorder, and Conformational Dynamics of the C-terminal Region of Human Desmoplakin. The Journal of Physical Chemistry. B. PMID 27188911 DOI: 10.1021/acs.jpcb.6b03261  1
2015 Gray C, Price CW, Lee CT, Dewald AH, Cline MA, McAnany CE, Columbus L, Mura C. Known structure, unknown function: An inquiry-based undergraduate biochemistry laboratory course. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. PMID 26148241 DOI: 10.1002/bmb.20873  1
2014 Panecka J, Mura C, Trylska J. Interplay of the bacterial ribosomal A-site, S12 protein mutations and paromomycin binding: a molecular dynamics study. Plos One. 9: e111811. PMID 25379961 DOI: 10.1371/journal.pone.0111811  1
2014 Mura C, McAnany CE. An introduction to biomolecular simulations and docking Molecular Simulation. 40: 732-764. DOI: 10.1080/08927022.2014.935372  1
2013 Mura C, Randolph PS, Patterson J, Cozen AE. Archaeal and eukaryotic homologs of Hfq: A structural and evolutionary perspective on Sm function. Rna Biology. 10: 636-51. PMID 23579284 DOI: 10.4161/rna.24538  1
2013 Patterson J, Mura C. Rapid colorimetric assays to qualitatively distinguish RNA and DNA in biomolecular samples. Journal of Visualized Experiments : Jove. e50225. PMID 23407542 DOI: 10.3791/50225  1
2011 Cie?lik M, Derewenda ZS, Mura C. Abstractions, algorithms and data structures for structural bioinformatics in PyCogent. Journal of Applied Crystallography. 44: 424-428. PMID 22479120 DOI: 10.1107/S0021889811004481  1
2011 Cie?lik M, Mura C. A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines. Bmc Bioinformatics. 12: 61. PMID 21352538 DOI: 10.1186/1471-2105-12-61  1
2011 Panecka J, Mura C, Trylska J. Molecular dynamics of potential rRNA binders: single-stranded nucleic acids and some analogues. The Journal of Physical Chemistry. B. 115: 532-46. PMID 21192664 DOI: 10.1021/jp106404u  1
2010 Mura C, McCrimmon CM, Vertrees J, Sawaya MR. An introduction to biomolecular graphics. Plos Computational Biology. 6. PMID 20865174 DOI: 10.1371/journal.pcbi.1000918  1
2009 Yawn B, Zhang L, Mura C, Sukhodolets MV. RapA, the SWI/SNF subunit of Escherichia coli RNA polymerase, promotes the release of nascent RNA from transcription complexes. Biochemistry. 48: 7794-806. PMID 19580329 DOI: 10.1021/bi9004123  1
2008 Mura C, McCammon JA. Molecular dynamics of a kappaB DNA element: base flipping via cross-strand intercalative stacking in a microsecond-scale simulation. Nucleic Acids Research. 36: 4941-55. PMID 18653524 DOI: 10.1093/nar/gkn473  0.96
2007 Arluison V, Mutyam SK, Mura C, Marco S, Sukhodolets MV. Sm-like protein Hfq: location of the ATP-binding site and the effect of ATP on Hfq-- RNA complexes. Protein Science : a Publication of the Protein Society. 16: 1830-41. PMID 17660259 DOI: 10.1110/ps.072883707  1
2006 Arluison V, Mura C, Guzmán MR, Liquier J, Pellegrini O, Gingery M, Régnier P, Marco S. Three-dimensional structures of fibrillar Sm proteins: Hfq and other Sm-like proteins. Journal of Molecular Biology. 356: 86-96. PMID 16337963 DOI: 10.1016/j.jmb.2005.11.010  1
2003 Mura C, Phillips M, Kozhukhovsky A, Eisenberg D. Structure and assembly of an augmented Sm-like archaeal protein 14-mer. Proceedings of the National Academy of Sciences of the United States of America. 100: 4539-44. PMID 12668760 DOI: 10.1073/pnas.0538042100  1
2003 Mura C, Kozhukhovsky A, Gingery M, Phillips M, Eisenberg D. The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs). Protein Science : a Publication of the Protein Society. 12: 832-47. PMID 12649441 DOI: 10.1110/ps.0224703  1
2003 Mura C, Katz JE, Clarke SG, Eisenberg D. Structure and function of an archaeal homolog of survival protein E (SurEalpha): an acid phosphatase with purine nucleotide specificity. Journal of Molecular Biology. 326: 1559-75. PMID 12595266 DOI: 10.1016/S0022-2836(03)00056-1  1
2002 Wang S, Mura C, Sawaya MR, Cascio D, Eisenberg D. Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets. Acta Crystallographica. Section D, Biological Crystallography. 58: 571-8. PMID 11914479 DOI: 10.1107/S0907444902001191  1
2001 Mura C, Cascio D, Sawaya MR, Eisenberg DS. The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core. Proceedings of the National Academy of Sciences of the United States of America. 98: 5532-7. PMID 11331747 DOI: 10.1073/pnas.091102298  1
1998 Presnell SR, Patil GS, Mura C, Jude KM, Conley JM, Bertrand JA, Kam CM, Powers JC, Williams LD. Oxyanion-mediated inhibition of serine proteases. Biochemistry. 37: 17068-81. PMID 9836602 DOI: 10.1021/bi981636u  1
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