| Year |
Citation |
Score |
| 2024 |
Roy TA, Bubier JA, Dickson PE, Wilcox TD, Ndukum J, Clark JW, Sukoff Rizzo SJ, Crabbe JC, Denegre JM, Svenson KL, Braun RE, Kumar V, Murray SA, White JK, Philip VM, et al. Discovery and validation of genes driving drug-intake and related behavioral traits in mice. Genes, Brain, and Behavior. e12875. PMID 38164795 DOI: 10.1111/gbb.12875 |
0.611 |
|
| 2023 |
Bates JN, Getsy PM, Coffee GA, Baby SM, MacFarlane PM, Hsieh YH, Knauss ZT, Bubier JA, Mueller D, Lewis SJ. L-cysteine ethyl ester prevents and reverses acquired physical dependence on morphine in male Sprague Dawley rats. Frontiers in Pharmacology. 14: 1303207. PMID 38111383 DOI: 10.3389/fphar.2023.1303207 |
0.204 |
|
| 2023 |
Bokoliya SC, Russell J, Dorsett Y, Panier H, Singh V, Daddi L, Yuan H, Dedon LR, Liu Z, Barson JR, Covault J, Bubier JA, Zhou Y. Short-chain-fatty acid valerate reduces voluntary alcohol intake in male mice. Research Square. PMID 37961441 DOI: 10.21203/rs.3.rs-3496323/v1 |
0.628 |
|
| 2023 |
Bubier JA. Genetics and Genomics of Addiction. Genes. 14. PMID 37761900 DOI: 10.3390/genes14091760 |
0.341 |
|
| 2023 |
Philip VM, He H, Saul MC, Dickson PE, Bubier JA, Chesler EJ. Gene expression genetics of the striatum of Diversity Outbred mice. Scientific Data. 10: 522. PMID 37543624 DOI: 10.1038/s41597-023-02426-2 |
0.627 |
|
| 2023 |
Roy TA, Bubier JA, Dickson PE, Wilcox TD, Ndukum J, Clark JW, Sukoff Rizzo SJ, Crabbe JC, Denegre JM, Svenson KL, Braun RE, Kumar V, Murray SA, White JK, Philip VM, et al. DISCOVERY AND VALIDATION OF GENES DRIVING DRUG-INTAKE AND RELATED BEHAVIORAL TRAITS IN MICE. Biorxiv : the Preprint Server For Biology. PMID 37503148 DOI: 10.1101/2023.07.09.548280 |
0.602 |
|
| 2023 |
Murray GC, Bubier JA, Zinder OJ, Harris B, Clark J, Christopher MC, Hanley C, Tjong H, Li M, Ngan CY, Reinholdt L, Burgess RW, Tadenev ALD. An allelic series of spontaneous Rorb mutant mice exhibit a gait phenotype, changes in retina morphology and behavior, and gene expression signatures associated with the unfolded protein response. G3 (Bethesda, Md.). PMID 37300435 DOI: 10.1093/g3journal/jkad131 |
0.387 |
|
| 2023 |
Philip VM, He H, Saul MC, Dickson PE, Bubier JA, Chesler EJ. Gene expression genetics of the striatum of Diversity Outbred mice. Biorxiv : the Preprint Server For Biology. PMID 37214980 DOI: 10.1101/2023.05.11.540390 |
0.627 |
|
| 2023 |
Tran TDB, Monroy Hernandez C, Nguyen H, Wright S, Tarantino LM, Chesler EJ, Weinstock GM, Zhou Y, Bubier JA. The microbial community dynamics of cocaine sensitization in two behaviorally divergent strains of collaborative cross mice. Genes, Brain, and Behavior. e12845. PMID 37114320 DOI: 10.1111/gbb.12845 |
0.737 |
|
| 2023 |
Benca-Bachman CE, Bubier J, Syed RA, Romero Villela PN, Palmer RHC. Polygenic influences on the behavioral effects of alcohol withdrawal in a mixed-ancestry population from the collaborative study on the genetics of alcoholism (COGA). Molecular and Cellular Neurosciences. 125: 103851. PMID 37031923 DOI: 10.1016/j.mcn.2023.103851 |
0.389 |
|
| 2022 |
Binh Tran TD, Nguyen H, Sodergren E, Addiction CFSNO, Dickson PE, Wright SN, Philip VM, Weinstock GM, Chesler EJ, Zhou Y, Bubier JA. Microbial glutamate metabolism predicts intravenous cocaine self-administration in diversity outbred mice. Neuropharmacology. 109409. PMID 36592885 DOI: 10.1016/j.neuropharm.2022.109409 |
0.751 |
|
| 2021 |
Wotton JM, Peterson E, Flenniken AM, Bains RS, Veeraragavan S, Bower LR, Bubier JA, Parisien M, Bezginov A, Haselimashhadi H, Mason J, Moore MA, Stewart ME, Clary DA, Delbarre DJ, et al. Identifying genetic determinants of inflammatory pain in mice using a large-scale gene-targeted screen. Pain. 163: 1139-1157. PMID 35552317 DOI: 10.1097/j.pain.0000000000002481 |
0.599 |
|
| 2021 |
Huggett SB, Johnson EC, Hatoum AS, Lai D, Srijeyanthan J, Bubier JA, Chesler EJ, Agrawal A, Palmer AA, Edenberg HJ, Palmer RHC. Genes identified in rodent studies of alcohol intake are enriched for heritability of human substance use. Alcoholism, Clinical and Experimental Research. PMID 34751961 DOI: 10.1111/acer.14738 |
0.58 |
|
| 2021 |
Suri K, Bubier JA, Wiles MV, Shultz LD, Amiji MM, Hosur V. Role of MicroRNA in Inflammatory Bowel Disease: Clinical Evidence and the Development of Preclinical Animal Models. Cells. 10. PMID 34571853 DOI: 10.3390/cells10092204 |
0.259 |
|
| 2021 |
Russell JT, Zhou Y, Weinstock GM, Bubier JA. The Gut Microbiome and Substance Use Disorder. Frontiers in Neuroscience. 15: 725500. PMID 34531718 DOI: 10.3389/fnins.2021.725500 |
0.717 |
|
| 2021 |
Hitzemann R, Bergeson SE, Berman AE, Bubier JA, Chesler EJ, Finn DA, Hein M, Hoffman P, Holmes A, Kisby BR, Lockwood D, Lodowski KH, McManus M, Owen JA, Ozburn AR, et al. Sex Differences in the Brain Transcriptome Related to Alcohol Effects and Alcohol Use Disorder. Biological Psychiatry. PMID 34274109 DOI: 10.1016/j.biopsych.2021.04.016 |
0.527 |
|
| 2021 |
Bubier JA, Chesler EJ, Weinstock GM. Host genetic control of gut microbiome composition. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 34159422 DOI: 10.1007/s00335-021-09884-2 |
0.686 |
|
| 2021 |
Palmer RHC, Benca-Bachman CE, Huggett SB, Bubier JA, McGeary JE, Ramgiri N, Srijeyanthan J, Yang J, Visscher PM, Yang J, Knopik VS, Chesler EJ. Multi-omic and multi-species meta-analyses of nicotine consumption. Translational Psychiatry. 11: 98. PMID 33542196 DOI: 10.1038/s41398-021-01231-y |
0.58 |
|
| 2020 |
Bubier JA, He H, Philip VM, Roy T, Hernandez CM, Bernat R, Donohue KD, O'Hara BF, Chesler EJ. Genetic variation regulates opioid-induced respiratory depression in mice. Scientific Reports. 10: 14970. PMID 32917924 DOI: 10.1038/S41598-020-71804-2 |
0.604 |
|
| 2020 |
Ouellette AR, Neuner SM, Dumitrescu L, Anderson LC, Gatti DM, Mahoney ER, Bubier JA, Churchill G, Peters L, Huentelman MJ, Herskowitz JH, Yang HS, Smith AN, Reitz C, Kunkle BW, et al. Cross-Species Analyses Identify Dlgap2 as a Regulator of Age-Related Cognitive Decline and Alzheimer's Dementia. Cell Reports. 32: 108091. PMID 32877673 DOI: 10.1016/J.Celrep.2020.108091 |
0.598 |
|
| 2020 |
Reynolds T, Johnson E, Huggett S, Bubier JA, Palmer RHC, Agrawal A, Baker EJ, Chesler EJ. Interpretation of psychiatric genome-wide association studies with multispecies heterogeneous functional genomic data integration. Neuropsychopharmacology : Official Publication of the American College of Neuropsychopharmacology. PMID 32791514 DOI: 10.1038/S41386-020-00795-5 |
0.666 |
|
| 2020 |
Bubier JA, Philip VM, Dickson PE, Mittleman G, Chesler EJ. Discovery of a Role for in Habituation and Cocaine Induced Locomotor Activation in Mice Using Heterogeneous Functional Genomic Analysis. Frontiers in Neuroscience. 14: 721. PMID 32742255 DOI: 10.3389/Fnins.2020.00721 |
0.641 |
|
| 2020 |
Huggett SB, Bubier JA, Chesler EJ, Palmer RHC. Do gene expression findings from mouse models of cocaine use recapitulate human cocaine use disorder in reward circuitry? Genes, Brain, and Behavior. e12689. PMID 32720468 DOI: 10.1111/Gbb.12689 |
0.615 |
|
| 2020 |
Datta U, Schoenrock SE, Bubier JA, Bogue MA, Jentsch JD, Logan RW, Tarantino LM, Chesler EJ. Prospects for finding the mechanisms of sex differences in addiction with human and model organism genetic analysis. Genes, Brain, and Behavior. PMID 32012419 DOI: 10.1111/Gbb.12645 |
0.626 |
|
| 2020 |
Bubier JA, Philip VM, Quince C, Campbell J, Zhou Y, Vishnivetskaya T, Duvvuru S, Hageman Blair R, Ndukum J, Donohue KD, Foster CM, Mellert DJ, Weinstock G, Culiat CT, O'Hara B, et al. A Microbe Associated with Sleep Revealed by a Novel Systems-Genetic Analysis of the Microbiome in Collaborative Cross Mice. Genetics. PMID 31896565 DOI: 10.1534/Genetics.119.303013 |
0.765 |
|
| 2019 |
Phillips CA, Wang K, Baker EJ, Bubier JA, Chesler EJ, Langston MA. On Finding and Enumerating Maximal and Maximum -Partite Cliques in -Partite Graphs. Algorithms. 12. PMID 31448059 DOI: 10.3390/A12010023 |
0.546 |
|
| 2019 |
Recla JM, Bubier JA, Gatti DM, Ryan JL, Long KH, Robledo RF, Glidden NC, Hou G, Churchill GA, Maser RS, Zhang ZW, Young EE, Chesler EJ, Bult CJ. Genetic mapping in Diversity Outbred mice identifies a Trpa1 variant influencing late-phase formalin response. Pain. 160: 1740-1753. PMID 31335644 DOI: 10.1097/J.Pain.0000000000001571 |
0.648 |
|
| 2019 |
Li Q, Philip VM, Stearns TM, Bubier JA, King BL, Low BE, Wiles MV, Saeidian AH, Sundberg BA, Uitto J, Sundberg JP. Quantitative Trait Locus and Integrative Genomics Revealed Candidate Modifier Genes for Ectopic Mineralization in Mouse Models of Pseudoxanthoma Elasticum. The Journal of Investigative Dermatology. PMID 31207231 DOI: 10.1016/J.Jid.2019.04.023 |
0.613 |
|
| 2019 |
Bubier JA, Sutphin GL, Reynolds TJ, Korstanje R, Fuksman-Kumpa A, Baker EJ, Langston MA, Chesler EJ. Integration of heterogeneous functional genomics data in gerontology research to find genes and pathway underlying aging across species. Plos One. 14: e0214523. PMID 30978202 DOI: 10.1371/Journal.Pone.0214523 |
0.604 |
|
| 2019 |
Recla JM, Bubier JA, Gatti DM, Ryan JL, Long KH, Robledo RF, Glidden NC, Hou G, Churchill GA, Maser RS, Zhang ZW, Young EE, Chesler EJ, Bult CJ. Genetic mapping in Diversity Outbred mice identifies a Trpa1 variant influencing late-phase formalin response. Pain. PMID 30925521 DOI: 10.1097/j.pain.0000000000001571 |
0.613 |
|
| 2019 |
Bubier J, Hill D, Mukherjee G, Reynolds T, Baker EJ, Berger A, Emerson J, Blake JA, Chesler EJ. Curating gene sets: challenges and opportunities for integrative analysis. Database : the Journal of Biological Databases and Curation. 2019. PMID 30888410 DOI: 10.1093/Database/Baz036 |
0.605 |
|
| 2019 |
Palmer R, Benca-Bachman C, Bubier J, Ramgiri N, Srijeyanthan J, Chesler E. Cross-Species Prioritization Of Genomic Loci For Nicotine & Alcohol Use Disorders European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2019.07.025 |
0.586 |
|
| 2017 |
Delprato A, Algéo MP, Bonheur B, Bubier JA, Lu L, Williams RW, Chesler EJ, Crusio WE. QTL and Systems Genetics Analysis of Mouse Grooming and Behavioral Responses to Novelty in an Open Field. Genes, Brain, and Behavior. PMID 28544613 DOI: 10.1111/Gbb.12392 |
0.616 |
|
| 2017 |
Bubier JA, Langston MA, Baker EJ, Chesler EJ. Integrative Functional Genomics for Systems Genetics in GeneWeaver.org. Methods in Molecular Biology (Clifton, N.J.). 1488: 131-152. PMID 27933523 DOI: 10.1007/978-1-4939-6427-7_6 |
0.645 |
|
| 2016 |
Srivastava AK, Wang Y, Huang R, Skinner C, Thompson T, Pollard L, Wood T, Luo F, Stevenson R, Polimanti R, Gelernter J, Lin X, Lim IY, Wu Y, Teh AL, ... ... Bubier JA, et al. Human genome meeting 2016: Houston, TX, USA. 28 February - 2 March 2016 Human Genomics. 10: 12-12. PMID 27294413 DOI: 10.1186/S40246-016-0063-5 |
0.277 |
|
| 2016 |
Bubier JA, Wilcox TD, Jay JJ, Langston MA, Baker EJ, Chesler EJ. Cross-Species Integrative Functional Genomics in GeneWeaver Reveals a Role for Pafah1b1 in Altered Response to Alcohol. Frontiers in Behavioral Neuroscience. 10: 1. PMID 26834590 DOI: 10.3389/Fnbeh.2016.00001 |
0.613 |
|
| 2015 |
Baker E, Bubier JA, Reynolds T, Langston MA, Chesler EJ. GeneWeaver: data driven alignment of cross-species genomics in biology and disease. Nucleic Acids Research. PMID 26656951 DOI: 10.1093/Nar/Gkv1329 |
0.617 |
|
| 2015 |
Dickson PE, Miller MM, Calton MA, Bubier JA, Cook MN, Goldowitz D, Chesler EJ, Mittleman G. Systems genetics of intravenous cocaine self-administration in the BXD recombinant inbred mouse panel. Psychopharmacology. PMID 26581503 DOI: 10.1007/S00213-015-4147-Z |
0.635 |
|
| 2015 |
Bubier JA, Phillips CA, Langston MA, Baker EJ, Chesler EJ. GeneWeaver: finding consilience in heterogeneous cross-species functional genomics data. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 26092690 DOI: 10.1007/S00335-015-9575-X |
0.639 |
|
| 2014 |
Baker E, Culpepper C, Philips C, Bubier J, Langston M, Chesler E. Identifying common components across biological network graphs using a bipartite data model. Bmc Proceedings. 8: S4. PMID 25374613 DOI: 10.1186/1753-6561-8-S6-S4 |
0.595 |
|
| 2014 |
Bubier JA, Jay JJ, Baker CL, Bergeson SE, Ohno H, Metten P, Crabbe JC, Chesler EJ. Identification of a QTL in Mus musculus for alcohol preference, withdrawal, and Ap3m2 expression using integrative functional genomics and precision genetics. Genetics. 197: 1377-93. PMID 24923803 DOI: 10.1534/Genetics.114.166165 |
0.668 |
|
| 2014 |
Sproule TJ, Bubier JA, Grandi FC, Sun VZ, Philip VM, McPhee CG, Adkins EB, Sundberg JP, Roopenian DC. Molecular identification of collagen 17a1 as a major genetic modifier of laminin gamma 2 mutation-induced junctional epidermolysis bullosa in mice. Plos Genetics. 10: e1004068. PMID 24550734 DOI: 10.1371/Journal.Pgen.1004068 |
0.745 |
|
| 2014 |
Bubier J, Langston M, Baker E, Chesler E. Integrative functional genomic analysis using GeneWeaver F1000research. 5. DOI: 10.7490/F1000Research.1097189.1 |
0.578 |
|
| 2013 |
McPhee CG, Bubier JA, Sproule TJ, Park G, Steinbuck MP, Schott WH, Christianson GJ, Morse HC, Roopenian DC. IL-21 is a double-edged sword in the systemic lupus erythematosus-like disease of BXSB.Yaa mice. Journal of Immunology (Baltimore, Md. : 1950). 191: 4581-8. PMID 24078696 DOI: 10.4049/Jimmunol.1300439 |
0.728 |
|
| 2013 |
Logan RW, Robledo RF, Recla JM, Philip VM, Bubier JA, Jay JJ, Harwood C, Wilcox T, Gatti DM, Bult CJ, Churchill GA, Chesler EJ. High-precision genetic mapping of behavioral traits in the diversity outbred mouse population. Genes, Brain, and Behavior. 12: 424-37. PMID 23433259 DOI: 10.1111/Gbb.12029 |
0.647 |
|
| 2012 |
Bubier JA, Chesler EJ. Accelerating discovery for complex neurological and behavioral disorders through systems genetics and integrative genomics in the laboratory mouse. Neurotherapeutics : the Journal of the American Society For Experimental Neurotherapeutics. 9: 338-48. PMID 22422471 DOI: 10.1007/S13311-012-0111-3 |
0.656 |
|
| 2012 |
Chesler EJ, Plitt A, Fisher D, Hurd B, Lederle L, Bubier JA, Kiselycznyk C, Holmes A. Quantitative trait loci for sensitivity to ethanol intoxication in a C57BL/6J×129S1/SvImJ inbred mouse cross. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 23: 305-21. PMID 22371272 DOI: 10.1007/S00335-012-9394-2 |
0.642 |
|
| 2012 |
Taylor DK, Bubier JA, Silva KA, Sundberg JP. Development, structure, and keratin expression in C57BL/6J mouse eccrine glands. Veterinary Pathology. 49: 146-54. PMID 22135020 DOI: 10.1177/0300985811430511 |
0.523 |
|
| 2012 |
Baker EJ, Jay JJ, Bubier JA, Langston MA, Chesler EJ. GeneWeaver: a web-based system for integrative functional genomics. Nucleic Acids Research. 40: D1067-76. PMID 22080549 DOI: 10.1093/Nar/Gkr968 |
0.627 |
|
| 2012 |
Sullivan C, Chen Y, Guo Z, Shan Y, Peng C, Zhang H, Bubier J, Sproule T, Roopenian D, Li S. Nfkb1 Plays a Tumor-Suppressing Role in BCR-ABL-Induced Leukemias Blood. 120: 1666-1666. DOI: 10.1182/Blood.V120.21.1666.1666 |
0.585 |
|
| 2011 |
McPhee CG, Sproule TJ, Shin DM, Bubier JA, Schott WH, Steinbuck MP, Avenesyan L, Morse HC, Roopenian DC. MHC class I family proteins retard systemic lupus erythematosus autoimmunity and B cell lymphomagenesis. Journal of Immunology (Baltimore, Md. : 1950). 187: 4695-704. PMID 21964024 DOI: 10.4049/Jimmunol.1101776 |
0.736 |
|
| 2011 |
Derbyshire K, Addey C, Coe D, Stuckey DW, Muezzin H, Bubier JA, Shaffer DJ, Roopenian DC, Chai JG, Scott DM. Molecular mechanisms of induction of antigen-specific allograft tolerance by intranasal peptide administration. Journal of Immunology (Baltimore, Md. : 1950). 186: 5719-28. PMID 21490154 DOI: 10.4049/Jimmunol.1002444 |
0.598 |
|
| 2010 |
Bubier JA, Sproule TJ, Alley LM, Webb CM, Fine JD, Roopenian DC, Sundberg JP. A mouse model of generalized non-Herlitz junctional epidermolysis bullosa. The Journal of Investigative Dermatology. 130: 1819-28. PMID 20336083 DOI: 10.1038/Jid.2010.46 |
0.697 |
|
| 2010 |
Sugihara T, Okiyama N, Miyasaka N, Kohsaka H, Moon EY, Kim HS, Oh JM, Lee KY, Lee SK, Fujita KN, Wang B, Kuwabara T, Tanaka K, Kamata I, Akasaa Y, ... ... Bubier J, et al. SLE and other connective tissue diseases (animal models) (PP-017) International Immunology. 22. DOI: 10.1093/Intimm/Dxq104 |
0.242 |
|
| 2009 |
Bubier JA, Sproule TJ, Foreman O, Spolski R, Shaffer DJ, Morse HC, Leonard WJ, Roopenian DC. A critical role for IL-21 receptor signaling in the pathogenesis of systemic lupus erythematosus in BXSB-Yaa mice. Proceedings of the National Academy of Sciences of the United States of America. 106: 1518-23. PMID 19164519 DOI: 10.1073/Pnas.0807309106 |
0.602 |
|
| 2008 |
Ghim S, Jenson AB, Bubier JA, Silva KA, Smith RS, Sundberg JP. Cataracts in transgenic mice caused by a human papillomavirus type 18 E7 oncogene driven by KRT1-14. Experimental and Molecular Pathology. 85: 77-82. PMID 18723014 DOI: 10.1016/J.Yexmp.2008.07.004 |
0.524 |
|
| 2007 |
Bubier JA, Bennett SM, Sproule TJ, Lyons BL, Olland S, Young DA, Roopenian DC. Treatment of BXSB-Yaa mice with IL-21R-Fc fusion protein minimally attenuates systemic lupus erythematosus. Annals of the New York Academy of Sciences. 1110: 590-601. PMID 17911475 DOI: 10.1196/Annals.1423.063 |
0.602 |
|
| 2004 |
Bubier JA, Schläppi M. Cold induction of EARLI1 , a putative Arabidopsis lipid transfer protein, is light and calcium dependent Plant Cell and Environment. 27: 929-936. DOI: 10.1111/J.1365-3040.2004.01198.X |
0.698 |
|
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