Denis A. Malyshev - Publications

Affiliations: 
2008-2013 Scripps Research Institute, La Jolla, La Jolla, CA, United States 

19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Ledbetter MP, Malyshev DA, Romesberg FE. Site-Specific Labeling of DNA via PCR with an Expanded Genetic Alphabet. Methods in Molecular Biology (Clifton, N.J.). 1973: 193-212. PMID 31016704 DOI: 10.1007/978-1-4939-9216-4_13  1
2016 Lavergne T, Lamichhane R, Malyshev DA, Li Z, Li L, Sperling E, Williamson JR, Millar DP, Romesberg FE. FRET Characterization of Complex Conformational Changes in a Large 16S Ribosomal RNA Fragment Site-Specifically Labeled Using Unnatural Base Pairs. Acs Chemical Biology. PMID 26942998 DOI: 10.1021/Acschembio.5B00952  1
2015 Malyshev DA, Romesberg FE. The Expanded Genetic Alphabet. Angewandte Chemie (International Ed. in English). 54: 11930-44. PMID 26304162 DOI: 10.1002/Anie.201502890  1
2015 Malyshev DA, Romesberg FE. The Expanded Genetic Alphabet Angewandte Chemie - International Edition. DOI: 10.1002/anie.201502890  1
2014 Dhami K, Malyshev DA, Ordoukhanian P, Kubelka T, Hocek M, Romesberg FE. Systematic exploration of a class of hydrophobic unnatural base pairs yields multiple new candidates for the expansion of the genetic alphabet. Nucleic Acids Research. 42: 10235-44. PMID 25122747 DOI: 10.1093/Nar/Gku715  1
2014 Malyshev DA, Dhami K, Lavergne T, Chen T, Dai N, Foster JM, Corrêa IR, Romesberg FE. A semi-synthetic organism with an expanded genetic alphabet. Nature. 509: 385-8. PMID 24805238 DOI: 10.1038/Nature13314  1
2014 Li L, Degardin M, Lavergne T, Malyshev DA, Dhami K, Ordoukhanian P, Romesberg FE. Natural-like replication of an unnatural base pair for the expansion of the genetic alphabet and biotechnology applications. Journal of the American Chemical Society. 136: 826-9. PMID 24152106 DOI: 10.1021/Ja408814G  1
2013 Betz K, Malyshev DA, Lavergne T, Welte W, Diederichs K, Romesberg FE, Marx A. Structural insights into DNA replication without hydrogen bonds. Journal of the American Chemical Society. 135: 18637-43. PMID 24283923 DOI: 10.1021/Ja409609J  1
2013 Li Z, Lavergne T, Malyshev DA, Zimmermann J, Adhikary R, Dhami K, Ordoukhanian P, Sun Z, Xiang J, Romesberg FE. Site-specifically arraying small molecules or proteins on DNA using an expanded genetic alphabet. Chemistry (Weinheim An Der Bergstrasse, Germany). 19: 14205-9. PMID 24026962 DOI: 10.1002/Chem.201302496  1
2013 Lavergne T, Degardin M, Malyshev DA, Quach HT, Dhami K, Ordoukhanian P, Romesberg FE. Expanding the scope of replicable unnatural DNA: stepwise optimization of a predominantly hydrophobic base pair. Journal of the American Chemical Society. 135: 5408-19. PMID 23547847 DOI: 10.1021/Ja312148Q  1
2012 Malyshev DA, Dhami K, Quach HT, Lavergne T, Ordoukhanian P, Torkamani A, Romesberg FE. Efficient and sequence-independent replication of DNA containing a third base pair establishes a functional six-letter genetic alphabet. Proceedings of the National Academy of Sciences of the United States of America. 109: 12005-10. PMID 22773812 DOI: 10.1073/Pnas.1205176109  1
2012 Betz K, Malyshev DA, Lavergne T, Welte W, Diederichs K, Dwyer TJ, Ordoukhanian P, Romesberg FE, Marx A. KlenTaq polymerase replicates unnatural base pairs by inducing a Watson-Crick geometry. Nature Chemical Biology. 8: 612-4. PMID 22660438 DOI: 10.1038/Nchembio.966  1
2012 Lavergne T, Malyshev DA, Romesberg FE. Major groove substituents and polymerase recognition of a class of predominantly hydrophobic unnatural base pairs. Chemistry (Weinheim An Der Bergstrasse, Germany). 18: 1231-9. PMID 22190386 DOI: 10.1002/Chem.201102066  1
2011 Seo YJ, Malyshev DA, Lavergne T, Ordoukhanian P, Romesberg FE. Site-specific labeling of DNA and RNA using an efficiently replicated and transcribed class of unnatural base pairs. Journal of the American Chemical Society. 133: 19878-88. PMID 21981600 DOI: 10.1021/Ja207907D  1
2010 Malyshev DA, Pfaff DA, Ippoliti SI, Hwang GT, Dwyer TJ, Romesberg FE. Solution structure, mechanism of replication, and optimization of an unnatural base pair. Chemistry (Weinheim An Der Bergstrasse, Germany). 16: 12650-9. PMID 20859962 DOI: 10.1002/Chem.201000959  1
2009 Malyshev DA, Seo YJ, Ordoukhanian P, Romesberg FE. PCR with an expanded genetic alphabet. Journal of the American Chemical Society. 131: 14620-1. PMID 19788296 DOI: 10.1021/Ja906186F  1
2007 Malkov AV, Kabeshov MA, Bella M, Kysilka O, Malyshev DA, Pluhácková K, Kocovský P. Vicinal amino alcohols as organocatalysts in asymmetric cross-aldol reaction of ketones: application in the synthesis of convolutamydine A. Organic Letters. 9: 5473-6. PMID 18031053 DOI: 10.1021/Ol7023983  1
2007 Chuprakov S, Malyshev DA, Trofimov A, Gevorgyan V. Sila morita-Baylis-Hillman reaction of cyclopropenes. Journal of the American Chemical Society. 129: 14868-9. PMID 17997559 DOI: 10.1021/Ja077437S  1
2006 Malyshev DA, Scott NM, Marion N, Stevens ED, Ananikov VP, Beletskaya IP, Nolan SP. Homogeneous nickel catalysts for the selective transfer of a single arylthio group in the catalytic hydrothiolation of alkynes Organometallics. 25: 4462-4470. DOI: 10.1021/Om060302V  1
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