Jörg Zimmermann - Publications

Affiliations: 
2003-2010 Scripps Research Institute, La Jolla, La Jolla, CA, United States 

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Adhikary R, Zimmermann J, Stanfield RL, Wilson IA, Yu W, Oda M, Romesberg FE. Structure and Dynamics of Stacking Interactions in an Antibody Binding Site. Biochemistry. PMID 31243995 DOI: 10.2210/Pdb6M87/Pdb  1
2017 Holcomb M, Adhikary R, Zimmermann J, Romesberg FE. Topological Evidence of Previously Overlooked Ni+1-H···Ni H-Bonds and Their Contribution to Protein Structure and Stability. The Journal of Physical Chemistry. A. PMID 29260873 DOI: 10.1021/Acs.Jpca.7B11013  1
2017 Adhikary R, Tan YX, Liu J, Zimmermann J, Holcomb M, Yvellez C, Dawson PE, Romesberg FE. Conformational Heterogeneity and DNA Recognition by the Morphogen Bicoid. Biochemistry. PMID 28547993 DOI: 10.1021/Acs.Biochem.7B00255  1
2017 Adhikary R, Zimmermann J, Romesberg FE. Transparent Window Vibrational Probes for the Characterization of Proteins With High Structural and Temporal Resolution. Chemical Reviews. PMID 28106985 DOI: 10.1021/Acs.Chemrev.6B00625  1
2015 Adhikary R, Zimmermann J, Dawson PE, Romesberg FE. Temperature Dependence of CN and SCN IR Absorptions Facilitates Their Interpretation and Use as Probes of Proteins. Analytical Chemistry. PMID 26523838 DOI: 10.1021/Acs.Analchem.5B03437  0.96
2015 Adhikary R, Yu W, Oda M, Walker RC, Chen T, Stanfield RL, Wilson IA, Zimmermann J, Romesberg FE. Adaptive mutations alter antibody structure and dynamics during affinity maturation. Biochemistry. 54: 2085-93. PMID 25756188 DOI: 10.1021/Bi501417Q  0.96
2014 Adhikary R, Zimmermann J, Liu J, Forrest RP, Janicki TD, Dawson PE, Corcelli SA, Romesberg FE. Evidence of an unusual N-H···N hydrogen bond in proteins. Journal of the American Chemical Society. 136: 13474-7. PMID 25226114 DOI: 10.1021/Ja503107H  0.96
2014 Adhikary R, Zimmermann J, Dawson PE, Romesberg FE. IR probes of protein microenvironments: utility and potential for perturbation. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 15: 849-53. PMID 24519759 DOI: 10.1002/Cphc.201400017  0.96
2014 Zimmermann J, Romesberg FE. Carbon-deuterium bonds as non-perturbative infrared probes of protein dynamics, electrostatics, heterogeneity, and folding. Methods in Molecular Biology (Clifton, N.J.). 1084: 101-19. PMID 24061918 DOI: 10.1007/978-1-62703-658-0_6  0.96
2013 Li Z, Lavergne T, Malyshev DA, Zimmermann J, Adhikary R, Dhami K, Ordoukhanian P, Sun Z, Xiang J, Romesberg FE. Site-specifically arraying small molecules or proteins on DNA using an expanded genetic alphabet. Chemistry (Weinheim An Der Bergstrasse, Germany). 19: 14205-9. PMID 24026962 DOI: 10.1002/Chem.201302496  1
2013 Adhikary R, Zimmermann J, Liu J, Dawson PE, Romesberg FE. Experimental characterization of electrostatic and conformational heterogeneity in an SH3 domain. The Journal of Physical Chemistry. B. 117: 13082-9. PMID 23834285 DOI: 10.1021/Jp402772X  0.96
2013 Tao H, Lee SC, Moeller A, Roy RS, Siu FY, Zimmermann J, Stevens RC, Potter CS, Carragher B, Zhang Q. Engineered nanostructured β-sheet peptides protect membrane proteins. Nature Methods. 10: 759-61. PMID 23817067 DOI: 10.1038/Nmeth.2533  0.96
2012 Adhikary R, Yu W, Oda M, Zimmermann J, Romesberg FE. Protein dynamics and the diversity of an antibody response. The Journal of Biological Chemistry. 287: 27139-47. PMID 22685303 DOI: 10.1074/Jbc.M112.372698  0.96
2012 Yu W, Dawson PE, Zimmermann J, Romesberg FE. Carbon-deuterium bonds as probes of protein thermal unfolding. The Journal of Physical Chemistry. B. 116: 6397-403. PMID 22625650 DOI: 10.1021/Jp303521T  0.96
2011 Zimmermann J, Thielges MC, Seo YJ, Dawson PE, Romesberg FE. Cyano groups as probes of protein microenvironments and dynamics. Angewandte Chemie (International Ed. in English). 50: 8333-7. PMID 21780257 DOI: 10.1002/Anie.201101016  0.96
2011 Zimmermann J, Thielges MC, Yu W, Dawson PE, Romesberg FE. Carbon-deuterium bonds as site-specific and nonperturbative probes for time-resolved studies of protein dynamics and folding Journal of Physical Chemistry Letters. 2: 412-416. DOI: 10.1021/Jz200012H  0.96
2011 Zimmermann J, Thielges MC, Yu W, Romesberg FE. Protein Dynamics and the Evolution of Novel Protein Function Protein Engineering Handbook, Volume 1 & Volume 2. 1: 147-185. DOI: 10.1002/9783527634026.ch6  0.96
2010 Zimmermann J, Romesberg FE, Brooks CL, Thorpe IF. Molecular description of flexibility in an antibody combining site. The Journal of Physical Chemistry. B. 114: 7359-70. PMID 20455589 DOI: 10.1021/Jp906421V  0.96
2010 Weinkam P, Zimmermann J, Romesberg FE, Wolynes PG. The folding energy landscape and free energy excitations of cytochrome c. Accounts of Chemical Research. 43: 652-60. PMID 20143816 DOI: 10.1021/Ar9002703  0.4
2009 Zimmermann J, Gundogdu K, Cremeens ME, Bandaria JN, Hwang GT, Thielges MC, Cheatum CM, Romesberg FE. Efforts toward developing probes of protein dynamics: vibrational dephasing and relaxation of carbon-deuterium stretching modes in deuterated leucine. The Journal of Physical Chemistry. B. 113: 7991-4. PMID 19441845 DOI: 10.1021/Jp900516C  0.96
2009 Thielges MC, Zimmermann J, Romesberg FE. Direct observation of ligand dynamics in cytochrome c. Journal of the American Chemical Society. 131: 6054-5. PMID 19361220 DOI: 10.1021/Ja810155S  0.96
2009 Cremeens ME, Zimmermann J, Yu W, Dawson PE, Romesberg FE. Direct observation of structural heterogeneity in a beta-sheet. Journal of the American Chemical Society. 131: 5726-7. PMID 19351132 DOI: 10.1021/Ja900505E  0.96
2009 Naraharisetty SR, Kasyanenko VM, Zimmermann J, Thielges MC, Romesberg FE, Rubtsov IV. C-D modes of deuterated side chain of leucine as structural reporters via dual-frequency two-dimensional infrared spectroscopy. The Journal of Physical Chemistry. B. 113: 4940-6. PMID 19298041 DOI: 10.1021/Jp8112446  0.96
2009 Thielges MC, Zimmermann J, Dawson PE, Romesberg FE. The determinants of stability and folding in evolutionarily diverged cytochromes c. Journal of Molecular Biology. 388: 159-67. PMID 19268474 DOI: 10.1016/J.Jmb.2009.02.059  0.96
2008 Weinkam P, Zimmermann J, Sagle LB, Matsuda S, Dawson PE, Wolynes PG, Romesberg FE. Characterization of alkaline transitions in ferricytochrome c using carbon-deuterium infrared probes. Biochemistry. 47: 13470-80. PMID 19035653 DOI: 10.1021/Bi801223N  0.96
2008 Thielges MC, Zimmermann J, Yu W, Oda M, Romesberg FE. Exploring the energy landscape of antibody-antigen complexes: protein dynamics, flexibility, and molecular recognition. Biochemistry. 47: 7237-47. PMID 18549243 DOI: 10.1021/Bi800374Q  0.96
2006 Sagle LB, Zimmermann J, Dawson PE, Romesberg FE. Direct and high resolution characterization of cytochrome c equilibrium folding. Journal of the American Chemical Society. 128: 14232-3. PMID 17076477 DOI: 10.1021/Ja065179D  0.96
2006 Zimmermann J, Oakman EL, Thorpe IF, Shi X, Abbyad P, Brooks CL, Boxer SG, Romesberg FE. Antibody evolution constrains conformational heterogeneity by tailoring protein dynamics. Proceedings of the National Academy of Sciences of the United States of America. 103: 13722-7. PMID 16954202 DOI: 10.1073/Pnas.0603282103  0.96
2006 Sagle LB, Zimmermann J, Matsuda S, Dawson PE, Romesberg FE. Redox-coupled dynamics and folding in cytochrome c. Journal of the American Chemical Society. 128: 7909-15. PMID 16771505 DOI: 10.1021/Ja060851S  0.96
2006 Cremeens ME, Fujisaki H, Zhang Y, Zimmermann J, Sagle LB, Matsuda S, Dawson PE, Straub JE, Romesberg FE. Efforts toward developing direct probes of protein dynamics. Journal of the American Chemical Society. 128: 6028-9. PMID 16669659 DOI: 10.1021/Ja061328G  0.96
2004 Ma YZ, Stenger J, Zimmermann J, Bachilo SM, Smalley RE, Weisman RB, Fleming GR. Ultrafast carrier dynamics in single-walled carbon nanotubes probed by femtosecond spectroscopy. The Journal of Chemical Physics. 120: 3368-73. PMID 15268491 DOI: 10.1063/1.1640339  0.96
2004 Sagle LB, Zimmermann J, Dawson PE, Romesberg FE. A high-resolution probe of protein folding. Journal of the American Chemical Society. 126: 3384-5. PMID 15025440 DOI: 10.1021/Ja049890Z  0.96
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