Rajarshi Chakrabarti - Publications

Affiliations: 
2013- Indian Institute of Technology Bombay, India 
Area:
Statistical Mechanics, Polymer Physics, Theoretical Physical Chemistry, Soft Matter, Biophysics
Website:
http://rajarshichakrabarti.wix.com/rajarshichakrabarti

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Sarkar S, Maity A, Chakrabarti R. Microscopic structural features of water in aqueous-reline mixtures of varying compositions. Physical Chemistry Chemical Physics : Pccp. PMID 33532810 DOI: 10.1039/d0cp05341d  1
2020 Theeyancheri L, Chaki S, Samanta N, Goswami R, Chelakkot R, Chakrabarti R. Translational and rotational dynamics of a self-propelled Janus probe in crowded environments. Soft Matter. PMID 32822444 DOI: 10.1039/d0sm00339e  1
2020 Kaiser M, Sánchez PA, Samanta N, Chakrabarti R, Kantorovich SS. Directing the diffusion of a non-magnetic nanosized active particle with external magnetic fields. The Journal of Physical Chemistry. B. PMID 32790376 DOI: 10.1021/acs.jpcb.0c05791  1
2020 Chaki S, Chakrabarti R. Escape of a passive particle from an activity-induced energy landscape: emergence of slow and fast effective diffusion. Soft Matter. PMID 32657294 DOI: 10.1039/d0sm00711k  1
2020 Maity A, Sarkar S, Theeyancheri L, Chakrabarti R. Choline chloride as a nano-crowder protects HP-36 from urea-induced denaturation: Insights from Solvent Dynamics and Protein-Solvent interaction. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 31971306 DOI: 10.1002/cphc.201901078  1
2020 Kailasham R, Prakash, JR, Chakrabarti R. Wet and dry internal friction can be measured with the Jarzynski equality Phys. Rev. Res. 2: 013331. DOI: 10.1103/PhysRevResearch.2.013331  1
2019 Kumar P, Theeyancheri L, Chaki S, Chakrabarti R. Transport of probe particles in a polymer network: effects of probe size, network rigidity and probe-polymer interaction. Soft Matter. PMID 31681926 DOI: 10.1039/c9sm01822k  1
2019 Chaki S, Chakrabarti R. Enhanced diffusion, swelling, and slow reconfiguration of a single chain in non-Gaussian active bath. The Journal of Chemical Physics. 150: 094902. PMID 30849884 DOI: 10.1063/1.5086152  1
2019 Dubey R, Patil K, Dantu SC, Sardesai DM, Bhatia P, Malik N, Acharya JD, Sarkar S, Ghosh S, Chakrabarti R, Sharma S, Kumar A. Azadirachtin inhibits amyloid formation, disaggregates pre-formed fibrils and protects pancreatic β-cells from human islet amyloid polypeptide/amylin induced cytotoxicity. The Biochemical Journal. PMID 30814273 DOI: 10.1042/BCJ20180820  1
2019 Chaki S, Chakrabarti R. Effects of active fluctuations on energetics of a colloidal particle: superdiffusion, dissipation and entropy production Physica A. 530: 121574. DOI: 10.1016/j.physa.2019.121574  1
2018 Sarkar S, Maity A, Sarma Phukon A, Ghosh S, Chakrabarti R. Salt Induced Structural Collapse, Swelling and Signature of Aggregation of Two ssDNA Strands: Insights from Molecular Dynamics Simulation. The Journal of Physical Chemistry. B. PMID 30540471 DOI: 10.1021/acs.jpcb.8b09098  0.01
2018 Kailasham R, Chakrabarti R, Prakash JR. Rheological consequences of wet and dry friction in a dumbbell model with hydrodynamic interactions and internal viscosity. The Journal of Chemical Physics. 149: 094903. PMID 30195310 DOI: 10.1063/1.5040397  1
2018 Chaki S, Chakrabarti R. Entropy production and work fluctuation relations for a single particle in active bath Physica A. 511: 302-315. DOI: 10.1016/j.physa.2018.07.055  1
2017 Ghosh S, Dey S, Patel M, Chakrabarti R. Can an ammonium-based room temperature ionic liquid counteract the urea-induced denaturation of a small peptide? Physical Chemistry Chemical Physics : Pccp. PMID 28262899 DOI: 10.1039/C6Cp08842B  1
2017 S Sarkar, S Ghosh, R Chakrabarti. Ammonium based stabilizers effectively counteract urea-induced denaturation in a small protein: insights from molecular dynamics simulations Rsc Adv.. 7: 52888. DOI: 10.1039/c7ra10712a  0.01
2016 Samanta N, Chakrabarti R. Tracer diffusion in a sea of polymers with binding zones: mobile vs. frozen traps. Soft Matter. PMID 27714359 DOI: 10.1039/c6sm01943a  1
2016 Ghosh S, Chakrabarti R. Spontaneous Unzipping of Xylonucleic Acid Assisted by a Single-Walled Carbon Nanotube: a Computational Study. The Journal of Physical Chemistry. B. PMID 27046289 DOI: 10.1021/acs.jpcb.6b02035  1
2016 Ghosh S, Patel N, Chakrabarti R. Correction to "Probing the Salt Concentration Dependent Nucleobase Distribution in a Single-Stranded DNA-Single-Walled Carbon Nanotube Hybrid with Molecular Dynamics". The Journal of Physical Chemistry. B. PMID 26935974 DOI: 10.1021/acs.jpcb.6b01729  1
2016 Samanta N, Chakrabarti R. Chain reconfiguration in active noise J. Phys. a: Math & Theo.. 49: 195601. DOI: 10.1088/1751-8113/49/19/195601  1
2016 Samanta N, Chakrabarti R. How does the tail length and the separation between the tagged monomers influence the reconfiguration of a chain with internal friction for different solvent-quality? J. Phys : Conf. Ser. 759: 012014. DOI: 10.1088/1742-6596/759/1/012014  1
2016 Ghosh S, Dixit M K, Chakrabarti R. Thermodynamics of site specific small molecular ion interaction with DNA duplex : a molecular dynamics study Mole. Simul.. 42: 715. DOI: 10.1080/08927022.2015.1085123  1
2016 Ghosh S, Chakrabarti R. Unzipping of Double-Stranded Ribonucleic Acids by Graphene and Single-Walled Carbon Nanotube: Helix Geometry versus Surface Curvature J. Phys. Chem. C. 120: 22681. DOI: 10.1021/acs.jpcc.6b06943  1
2016 Ghosh S, Chakrabarti R. Unzipping of double-stranded ribonucleic acids by graphene and single-walled carbon nanotube: Helix geometry versus surface curvature Journal of Physical Chemistry C. 120: 22681-22693. DOI: 10.1021/acs.jpcc.6b06943  1
2016 Samanta N, Chakrabarti R. Reconfiguration Dynamics in folded and intrinsically disordered protein with internal friction: Effect of solvent quality and denaturant Physica A. 450: 165. DOI: 10.1016/j.physa.2015.12.147  1
2015 Ghosh S, Patel N, Chakrabarti R. Probing the Salt Concentration Dependent Nucleobase Distributions in a Single Stranded DNA-Single-Walled Carbon Nanotube Hybrid with Molecular Dynamics. The Journal of Physical Chemistry. B. PMID 26716359 DOI: 10.1021/acs.jpcb.5b12044  1
2015 Ghosh S, Dixit MK, Chakrabarti R. Thermodynamics of site-specific small molecular ion interactions with DNA duplex: a molecular dynamics study Molecular Simulation. DOI: 10.1080/08927022.2015.1085123  1
2015 Samanta N, Chakrabarti R. Looping Dynamics of a flexible chain with internal friction at different degrees of compactness Physica A. 437: 377. DOI: 10.1016/j.physa.2015.05.042  1
2015 Ghosh S, Dixit H, Chakrabarti R. Ion assisted structural collapse of a single stranded DNA: A molecular dynamics approach Chemical Physics. 459: 137-147. DOI: 10.1016/j.chemphys.2015.07.038  1
2015 Ghosh S, Dixit H, Chakrabarti R. Ion assisted structural collapse of a single stranded DNA: a molecular dynamics approach Chem. Phys.. 459: 137. DOI: 10.1016/j.chemphys.2015.07.038  1
2014 Samanta N, Ghosh J, Chakrabarti R. Looping and reconfiguration dynamics of a flexible chain with internal friction Aip Adv.. 4: 067102. DOI: 10.1063/1.4881416  1
2014 Chakrabarti R, Debnath A, Sebastian K L. Diffusion in an elastic medium: A model for macromolecule transport across the nuclear pore complex Physica A. 404: 64. DOI: 10.1016/j.physa.2014.02.059  1
2013 Chakrabarti R, Kesselheim S, Košovan P, Holm C. Tracer diffusion in a crowded cylindrical channel. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 87: 062709. PMID 23848717 DOI: 10.1103/PhysRevE.87.062709  1
2013 Samanta N, Chakrabarti R. End to end loop formation in a single polymer chain with internal friction Chem. Phys. Letts.. 582: 71. DOI: 10.1016/j.cplett.2013.07.039  1
2013 Samanta N, Chakrabarti R. End to end loop formation in a single polymer chain with internal friction Chemical Physics Letters. 582: 71-77. DOI: 10.1016/j.cplett.2013.07.039  1
2012 Chakrabarti R. Dynamics of end-to-end loop formation for an isolated chain in viscoelastic fluid Physica A. 391: 5236. DOI: 10.1016/j.physa.2012.06.025  0.01
2012 Chakrabarti R. Dynamics of end-to-end loop formation: A flexible chain in the presence of hydrodynamic interaction Physica A. 391: 4081. DOI: 10.1016/j.physa.2012.03.025  0.01
2012 Chakrabarti R. Dynamics of end-to-end loop formation: A flexible chain in the presence of hydrodynamic interaction Physica a: Statistical Mechanics and Its Applications. 391: 4081-4087. DOI: 10.1016/j.physa.2012.03.025  1
2011 Chakrabarti R. Bubble dynamics in double stranded DNA: A Rouse chain based approach Chem. Phys. Letts.. 502: 107. DOI: Bubble dynamics in double stranded DNA: A Rouse chain based approach  0.01
2011 Delannoy, Jean-Yves, Couty, Marc, Schweizer, K S, Chakrabarti R. Packing correlations, collective scattering and compressibility of fractal-like aggregates in polymer nanocomposites and suspensions Soft Matter. 7: 5397. DOI: 10.1039/C1SM05021D  0.01
2010 Chakrabarti R, Schweizer KS. Polymer-mediated spatial organization of nanoparticles in dense melts: Transferability and an effective one-component approach. The Journal of Chemical Physics. 133: 144905. PMID 20950039 DOI: 10.1063/1.3501358  1
2010 Chakrabarti R. Dynamic disorder with exponential sink Chem. Phys. Letts.. 495: 60. DOI: 10.1016/j.cplett.2010.06.076  0.01
2009 Chakrabarti R, Sebastian KL. A lower bound to the survival probability and an approximate first passage time distribution for Markovian and non-Markovian dynamics in phase space. The Journal of Chemical Physics. 131: 224504. PMID 20001054 DOI: 10.1063/1.3269613  1
2009 Chakrabarti R. Transient state work fluctuation theorem for a classical harmonic oscillator linearly coupled to a harmonic bath Pramana J. Phys.. 72: 665. DOI: 10.1007/s12043-009-0060-5  0.01
2007 Chakrabarti R. Exact analytical evaluation of time dependent transmission coefficient from the method of reactive flux for an inverted parabolic barrier. The Journal of Chemical Physics. 126: 134106. PMID 17430015 DOI: 10.1063/1.2713108  1
2006 Debnath A, Chakrabarti R, Sebastian KL. Rate processes with dynamical disorder: a direct variational approach. The Journal of Chemical Physics. 124: 204111. PMID 16774323 DOI: 10.1063/1.2200695  1
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