Priyadarshi Satpati - Publications

Affiliations: 
IIT Guwahati 
Area:
Computational chemistry
Website:
http://www.iitg.ac.in/psatpati/index.html

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kumar A, Satpati P. Mg vs Ca bound active site of group II intron- A MD study. Journal of Molecular Graphics & Modelling. 97: 107546. PMID 32018058 DOI: 10.1016/J.Jmgm.2020.107546  1
2019 Shukla S, Kumar A, Das D, Satpati P. Principle of DNA recognition by sporulation-regulatory protein (Spo0A) in . Journal of Biomolecular Structure & Dynamics. 1-10. PMID 31760912 DOI: 10.1080/07391102.2019.1696890  1
2019 Kumar A, Åqvist J, Satpati P. Principles of tRNA Selection by Alanyl-tRNA Synthetase Based on the Critical G3·U70 Base Pair. Acs Omega. 4: 15539-15548. PMID 31572855 DOI: 10.1021/acsomega.9b01827  1
2019 Kumar A, Satpati P. Why double-stranded RNA with 5'-monophosphate is a poor binder to retinoic acid-inducible gene-I with respect to 5'-hydroxyl analogue? Journal of Biomolecular Structure & Dynamics. 1-11. PMID 31543002 DOI: 10.1080/07391102.2019.1671225  1
2019 Kumar A, Mukherjee D, Satpati P. Mutations in Parkinson's Disease Associated Protein DJ-1 Alter the Energetics of DJ-1 Dimerization. Journal of Chemical Information and Modeling. PMID 30789733 DOI: 10.1021/Acs.Jcim.8B00687  1
2018 Kumar A, Satpati P. Energetics of Preferential Binding of Retinoic Acid-Inducible Gene-I to Double-Stranded Viral RNAs with 5' Tri-/Diphosphate over 5' Monophosphate. Acs Omega. 3: 3786-3795. PMID 30023880 DOI: 10.1021/acsomega.7b02019  1
2018 Kumar A, Satpati P. Principle of K/Na selectivity in the active site of group II intron at various stages of self-splicing pathway. Journal of Molecular Graphics & Modelling. 84: 1-9. PMID 29787928 DOI: 10.1016/J.Jmgm.2018.05.003  1
2017 Kumar A, Basu D, Satpati P. Structure Based Energetics of Stop Codon Recognition by Eukaryotic Release Factor. Journal of Chemical Information and Modeling. PMID 28825483 DOI: 10.1021/Acs.Jcim.7B00340  1
2015 Simonson T, Aleksandrov A, Satpati P. Electrostatic free energies in translational GTPases: Classic allostery and the rest. Biochimica Et Biophysica Acta. 1850: 1006-16. PMID 25047891 DOI: 10.1016/J.Bbagen.2014.07.006  1
2013 Simonson T, Satpati P. Simulating GTP:Mg and GDP:Mg with a simple force field: a structural and thermodynamic analysis. Journal of Computational Chemistry. 34: 836-46. PMID 23280996 DOI: 10.1002/Jcc.23207  1
2012 Simonson T, Satpati P. Nucleotide recognition by the initiation factor aIF5B: free energy simulations of a neoclassical GTPase. Proteins. 80: 2742-57. PMID 22887821 DOI: 10.1002/Prot.24158  1
2012 Satpati P, Simonson T. Conformational selection through electrostatics: Free energy simulations of GTP and GDP binding to archaeal initiation factor 2. Proteins. 80: 1264-82. PMID 22275120 DOI: 10.1002/Prot.24023  1
2012 Satpati P, Simonson T. Conformational selection by the aIF2 GTPase: a molecular dynamics study of functional pathways. Biochemistry. 51: 353-61. PMID 22165972 DOI: 10.1021/Bi201675N  1
2011 Satpati P, Clavaguéra C, Ohanessian G, Simonson T. Free energy simulations of a GTPase: GTP and GDP binding to archaeal initiation factor 2. The Journal of Physical Chemistry. B. 115: 6749-63. PMID 21534562 DOI: 10.1021/Jp201934P  1
2011 Satpati P, Clavaguéra C, Ohanessian G, Simonson T. Free energy simulations of a GTPase: GTP and GDP binding to archaeal initiation factor 2 Journal of Physical Chemistry B. 115: 6749-6763. DOI: 10.1021/jp201934p  0.36
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