Binny J. Cherayil - Publications

Affiliations: 
1987 University of Chicago, Chicago, IL 
 1990- Indian Institute of Science Bangalore 
Website:
http://ipc.iisc.ac.in/~bjc/page3.html

94 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Cherayil BJ. Internal friction as a factor in the anomalous chain length dependence of DNA transcriptional dynamics. The Journal of Chemical Physics. 160. PMID 38165100 DOI: 10.1063/5.0184878  0.366
2022 Cherayil BJ. Statistical Dynamics of Flow-Driven Globular Polymers. The Journal of Physical Chemistry. B. PMID 35762816 DOI: 10.1021/acs.jpcb.2c02989  0.325
2021 Tyagi N, Cherayil BJ. The relaxation dynamics of single flow-stretched polymers in semidilute to concentrated solutions. The Journal of Chemical Physics. 154: 024907. PMID 33445903 DOI: 10.1063/5.0037513  0.376
2019 Pagare A, Cherayil BJ. Stochastic thermodynamics of a harmonically trapped colloid in linear mixed flow. Physical Review. E. 100: 052124. PMID 31869946 DOI: 10.1103/Physreve.100.052124  0.367
2019 Ghosal A, Cherayil BJ. Fluctuation relations for flow-driven trapped colloids and implications for related polymeric systems European Physical Journal B. 92: 243. DOI: 10.1140/Epjb/E2019-100376-0  0.802
2018 Ghosal A, Cherayil BJ. Anomalies in the coil-stretch transition of flexible polymers The Journal of Chemical Physics. 148: 094903. DOI: 10.1063/1.5017555  0.81
2017 Ghosal A, Cherayil BJ. The effects of slit-like confinement on flow-induced polymer deformation. The Journal of Chemical Physics. 147: 064905. PMID 28810795 DOI: 10.1063/1.4997639  0.811
2017 Tyagi N, Cherayil BJ. Non-Gaussian Brownian Diffusion in Dynamically Disordered Thermal Environments. The Journal of Physical Chemistry. B. 121: 7204-7209. PMID 28718637 DOI: 10.1021/Acs.Jpcb.7B03870  0.369
2016 Ghosal A, Cherayil BJ. Polymer extension under flow: Some statistical properties of the work distribution function. The Journal of Chemical Physics. 145: 204901. PMID 27908136 DOI: 10.1063/1.4967962  0.823
2016 Ghosal A, Cherayil BJ. Polymer extension under flow: A path integral evaluation of the free energy change using the Jarzynski relation. The Journal of Chemical Physics. 144: 214902. PMID 27276965 DOI: 10.1063/1.4952765  0.812
2016 Ghosal A, Cherayil BJ. The distribution of heat fluctuations in resistively-coupled dual temperature heat baths Journal of Statistical Mechanics: Theory and Experiment. 2016. DOI: 10.1088/1742-5468/2016/04/043201  0.785
2015 Ghosal A, Cherayil BJ. Anomalous lifetime statistics of ligand-receptor binding in a tethered polymer system Journal of Statistical Mechanics: Theory and Experiment. 2015. DOI: 10.1088/1742-5468/2015/10/P10012  0.811
2014 Cherayil BJ, Bhattacharyya P. Dynamics of the reaction between the free end of a tethered self-avoiding polymer and a flat penetrable surface: a renormalization group study. The Journal of Chemical Physics. 140: 234902. PMID 24952563 DOI: 10.1063/1.4882357  0.446
2013 Sharma R, Cherayil BJ. Interfacial growth as a model of tube-width heterogeneities in concentrated solutions of stiff polymers. The Journal of Chemical Physics. 138: 244911. PMID 23822278 DOI: 10.1063/1.4811661  0.764
2013 Bhattacharyya P, Cherayil BJ. The diffusion and relaxation of Gaussian chains in narrow rectangular slits. The Journal of Chemical Physics. 138: 244904. PMID 23822271 DOI: 10.1063/1.4811332  0.438
2013 Sharma R, Cherayil BJ. Reaction dynamics under confinement: an exact path integral treatment of a two-stage model of stochastic gene expression Journal of Statistical Mechanics: Theory and Experiment. 2013: 10029. DOI: 10.1088/1742-5468/2013/10/P10029  0.734
2012 Sharma R, Cherayil BJ. Subdiffusion in hair bundle dynamics: the role of protein conformational fluctuations. The Journal of Chemical Physics. 137: 215102. PMID 23231261 DOI: 10.1063/1.4768902  0.733
2012 Bhattacharyya P, Cherayil BJ. Chain extension of a confined polymer in steady shear flow. The Journal of Chemical Physics. 137: 194906. PMID 23181334 DOI: 10.1063/1.4765295  0.468
2012 Bhattacharyya P, Sharma R, Cherayil BJ. Confinement and viscoelastic effects on chain closure dynamics. The Journal of Chemical Physics. 136: 234903. PMID 22779615 DOI: 10.1063/1.4729041  0.781
2012 Sharma R, Cherayil BJ. Distribution of transverse chain fluctuations in harmonically confined semiflexible polymers. The Journal of Chemical Physics. 136: 184902. PMID 22583309 DOI: 10.1063/1.4712306  0.784
2012 Sharma R, Cherayil BJ. The force distribution function of an oscillator model of polymer stretching at constant velocity Journal of Statistical Mechanics: Theory and Experiment. 2012: 5019. DOI: 10.1088/1742-5468/2012/05/P05019  0.771
2011 Chatterjee D, Cherayil BJ. Subdiffusion as a model of transport through the nuclear pore complex. The Journal of Chemical Physics. 135: 155101. PMID 22029335 DOI: 10.1063/1.3651100  0.699
2011 Sharma R, Cherayil BJ. Work fluctuations in an elastic dumbbell model of polymers in planar elongational flow. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 041805. PMID 21599196 DOI: 10.1103/Physreve.83.041805  0.769
2011 Chatterjee D, Cherayil BJ. The stretching of single poly-ubiquitin molecules: static versus dynamic disorder in the non-exponential kinetics of chain unfolding. The Journal of Chemical Physics. 134: 165104. PMID 21528983 DOI: 10.1063/1.3582899  0.733
2011 Chatterjee D, Cherayil BJ. Single-molecule thermodynamics: the heat distribution function of a charged particle in a static magnetic field Journal of Statistical Mechanics: Theory and Experiment. 2011: 3010. DOI: 10.1088/1742-5468/2011/03/P03010  0.704
2010 Chatterjee D, Cherayil BJ. Exact path-integral evaluation of the heat distribution function of a trapped brownian oscillator. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 82: 051104. PMID 21230434 DOI: 10.1103/Physreve.82.051104  0.709
2010 Sharma R, Cherayil BJ. Polymer melt dynamics: microscopic roots of fractional viscoelasticity. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 81: 021804. PMID 20365587 DOI: 10.1103/Physreve.81.021804  0.785
2010 Chatterjee D, Cherayil BJ. A model of anomalous enzyme-catalyzed gel degradation kinetics. The Journal of Physical Chemistry. B. 114: 5190-5. PMID 20345155 DOI: 10.1021/Jp100212R  0.714
2010 Chatterjee D, Cherayil BJ. Anomalous reaction-diffusion as a model of nonexponential DNA escape kinetics. The Journal of Chemical Physics. 132: 025103. PMID 20095716 DOI: 10.1063/1.3290987  0.733
2009 Chatterjee D, Cherayil BJ. Brownian particles in stationary and moving traps: the mean and variance of the heat distribution function. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 011118. PMID 19658664 DOI: 10.1103/Physreve.80.011118  0.725
2009 Chatterjee D, Cherayil BJ. Brownian particles in stationary and moving traps: The mean and variance of the heat distribution function Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 80. DOI: 10.1103/PhysRevE.80.011118  0.703
2008 Chaudhury S, Cherayil BJ. A model of anomalous chain translocation dynamics. The Journal of Physical Chemistry. B. 112: 15973-9. PMID 19367953 DOI: 10.1021/Jp7108362  0.753
2008 Chaudhury S, Chatterjee D, Cherayil BJ. The dynamics of single enzyme reactions: A reconsideration of Kramers' model for colored noise processes. The Journal of Chemical Physics. 129: 075104. PMID 19044805 DOI: 10.1063/1.2969767  0.801
2008 Chaudhury S, Chatterjee D, Cherayil BJ. Resolving a puzzle concerning fluctuation theorems for forced harmonic oscillators in non-Markovian heat baths Journal of Statistical Mechanics: Theory and Experiment. 2008: 10006. DOI: 10.1088/1742-5468/2008/10/P10006  0.79
2008 Chaudhury S, Cherayil BJ. A model of anomalous chain translocation dynamics Journal of Physical Chemistry B. 112: 15973-15979. DOI: 10.1021/jp7108362  0.735
2007 Chatterjee D, Chaudhury S, Cherayil BJ. The dynamics of intermittent strand separation in double-stranded DNA. The Journal of Chemical Physics. 127: 155104. PMID 17949220 DOI: 10.1063/1.2793781  0.785
2007 Chaudhury S, Cherayil BJ. Modulation of electron transfer kinetics by protein conformational fluctuations during early-stage photosynthesis. The Journal of Chemical Physics. 127: 145103. PMID 17935447 DOI: 10.1063/1.2783845  0.699
2007 Chaudhury S, Cherayil BJ. Dynamic disorder in single-molecule Michaelis-Menten kinetics: the reaction-diffusion formalism in the Wilemski-Fixman approximation. The Journal of Chemical Physics. 127: 105103. PMID 17867782 DOI: 10.1063/1.2768059  0.704
2007 Chaudhury S, Kou SC, Cherayil BJ. Model of fluorescence intermittency in single enzymes. The Journal of Physical Chemistry. B. 111: 2377-84. PMID 17288472 DOI: 10.1021/Jp065737A  0.706
2006 Chaudhury S, Cherayil BJ. Structural relaxation in complex liquids: non-Markovian dynamics in a bistable potential. The Journal of Chemical Physics. 125: 184505. PMID 17115763 DOI: 10.1063/1.2374887  0.725
2006 Chaudhury S, Cherayil BJ. Approximate first passage time distribution for barrier crossing in a double well under fractional Gaussian noise. The Journal of Chemical Physics. 125: 114106. PMID 16999465 DOI: 10.1063/1.2354089  0.711
2006 Chaudhury S, Cherayil BJ. Complex chemical kinetics in single enzyme molecules: Kramers's model with fractional Gaussian noise. The Journal of Chemical Physics. 125: 24904. PMID 16848608 DOI: 10.1063/1.2209231  0.705
2005 Kou SC, Cherayil BJ, Min W, English BP, Xie XS. Single-molecule Michaelis-Menten equations. The Journal of Physical Chemistry. B. 109: 19068-81. PMID 16853459 DOI: 10.1021/Jp051490Q  0.356
2005 Min W, English BP, Luo G, Cherayil BJ, Kou SC, Xie XS. Fluctuating enzymes: lessons from single-molecule studies. Accounts of Chemical Research. 38: 923-31. PMID 16359164 DOI: 10.1021/Ar040133F  0.364
2005 Debnath P, Min W, Xie XS, Cherayil BJ. Multiple time scale dynamics of distance fluctuations in a semiflexible polymer: a one-dimensional generalized Langevin equation treatment. The Journal of Chemical Physics. 123: 204903. PMID 16351313 DOI: 10.1063/1.2109809  0.803
2004 Debnath P, Cherayil BJ. Dynamics of chain closure: approximate treatment of nonlocal interactions. The Journal of Chemical Physics. 120: 2482-9. PMID 15268390 DOI: 10.1063/1.1637574  0.812
2003 Dua A, Cherayil BJ. Polymer dynamics in linear mixed flow Journal of Chemical Physics. 119: 5696-5700. DOI: 10.1063/1.1599276  0.458
2003 Debnath P, Cherayil BJ. Semiflexible random A–B block copolymers under tension The Journal of Chemical Physics. 118: 1970-1978. DOI: 10.1063/1.1530578  0.802
2002 Dua A, Cherayil BJ. The thermodynamics of reversible cyclization in semiflexible polymers The Journal of Chemical Physics. 117: 7765-7773. DOI: 10.1063/1.1509448  0.782
2002 Cherayil BJ. Anomalies in the self-diffusion coefficient near the critical point Journal of Chemical Physics. 116: 8455-8462. DOI: 10.1063/1.1471549  0.343
2002 Debnath P, Cherayil BJ. Conformational properties of randomly flexible heteropolymers The Journal of Chemical Physics. 116: 4330-4338. DOI: 10.1063/1.1445748  0.782
2002 Dua A, Cherayil BJ. The dynamics of chain closure in semiflexible polymers The Journal of Chemical Physics. 116: 399. DOI: 10.1063/1.1423937  0.803
2001 Cherayil BJ. Quantum correction factors for multiphonon processes in condensed phase vibrational relaxation The Journal of Chemical Physics. 115: 5536-5545. DOI: 10.1063/1.1397334  0.312
2001 Myers DJ, Shigeiwa M, Cherayil BJ, Fayer MD. Temperature and density dependent solute vibrational relaxation in supercritical fluoroform Journal of Chemical Physics. 115: 4689-4695. DOI: 10.1063/1.1389853  0.313
2000 Dua A, Cherayil BJ. Chain dynamics in steady shear flow The Journal of Chemical Physics. 112: 8707-8714. DOI: 10.1063/1.481487  0.792
2000 Dua A, Cherayil BJ. The anomalous diffusion of polymers in random media Journal of Chemical Physics. 112: 421-427. DOI: 10.1063/1.480637  0.782
2000 Dua A, Cherayil BJ. Effects of stiffness on the flow behavior of polymers The Journal of Chemical Physics. 113: 10776-10783. DOI: 10.1063/1.1324710  0.776
2000 Myers DJ, Shigeiwa M, Fayer MD, Cherayil BJ. Vibrational Lifetimes and Spectral Shifts in Supercritical Fluids as a Function of Density: Experiments and Theory Journal of Physical Chemistry B. 104: 2402-2414. DOI: 10.1021/Jp992717I  0.326
2000 Myers DJ, Shigeiwa M, Stromberg C, Fayer MD, Cherayil BJ. Temperature dependence of solute vibrational relaxation in supercritical fluids: Experiment and theory Chemical Physics Letters. 325: 619-626. DOI: 10.1016/S0009-2614(00)00682-5  0.309
1999 Cherayil BJ. An integral representation of isolated binary collisions in vibrational relaxation Journal of Chemical Physics. 111: 6471-6473. DOI: 10.1063/1.479943  0.313
1999 Dua A, Cherayil BJ. Polymer collapse in supercritical solvents The Journal of Chemical Physics. 111: 3274-3277. DOI: 10.1063/1.479606  0.769
1998 Dua A, Cherayil BJ. Bond fluctuation model of polymers in random media The Journal of Chemical Physics. 109: 7011-7016. DOI: 10.1063/1.477337  0.785
1997 Myers DJ, Urdahl RS, Cherayil BJ, Fayer MD. Temperature dependence of vibrational lifetimes at the critical density in supercritical mixtures The Journal of Chemical Physics. 107: 9741-9748. DOI: 10.1063/1.475270  0.311
1997 Cherayil BJ. A Semiempirical Crossover Analysis of Phase Separation in Polymer Solutions Macromolecules. 30: 4464-4469. DOI: 10.1021/Ma9700082  0.426
1996 Biswas P, Cherayil BJ, Paramekanti A. Erratum: Polymers below the theta point: Renormalization group considerations [J. Chem. Phys. 103, 7562 (1995)] The Journal of Chemical Physics. 104: 5351-5351. DOI: 10.1063/1.471823  0.628
1996 Cherayil BJ, Freed KF. The concentration dependent cooperative friction coefficient of dilute polymer solutions at the theta point Journal of Chemical Physics. 104: 5983-5996. DOI: 10.1063/1.471330  0.587
1996 Cherayil BJ, Freed KF. The concentration dependent cooperative friction coefficient of dilute polymer solutions at the theta point The Journal of Chemical Physics. 104: 5983-5996. DOI: 10.1063/1.471330  0.449
1996 Biswas P, Paramekanti A, Cherayil BJ. Shapes of generalized random walks Journal of Chemical Physics. 104: 3360-3365. DOI: 10.1063/1.471039  0.661
1995 Biswas P, Paramekanti A, Cherayil BJ. Polymers below the theta point: Renormalization group considerations The Journal of Chemical Physics. 103: 7562-7568. DOI: 10.1063/1.470273  0.676
1995 Biswas P, Cherayil BJ. Dynamics of Fractional Brownian Walks The Journal of Physical Chemistry. 99: 816-821. DOI: 10.1021/J100002A052  0.612
1994 Biswas P, Cherayil BJ. Erratum: Chain dimensions near the critical point [J. Chem. Phys. 100, 4665 (1994)] The Journal of Chemical Physics. 101: 6371-6371. DOI: 10.1063/1.468514  0.653
1994 Biswas P, Cherayil BJ. Erratum: Radial dimensions of starburst polymers [J. Chem. Phys. 100, 3201 (1994)] The Journal of Chemical Physics. 101: 6371-6371. DOI: 10.1063/1.468513  0.666
1994 Cherayil BJ, Biswas P. Erratum: Path integral description of polymers using fractional Brownian walks [J. Chem. Phys. 99, 9230 (1993)] The Journal of Chemical Physics. 101: 6371-6371. DOI: 10.1063/1.468512  0.671
1994 Biswas P, Cherayil BJ. Radial dimensions of starburst polymers Journal of Chemical Physics. 100: 3201-3209. DOI: 10.1063/1.467247  0.689
1994 Biswas P, Cherayil BJ. Chain dimensions near the critical point The Journal of Chemical Physics. 100: 4665-4673. DOI: 10.1063/1.466249  0.718
1993 Cherayil BJ, Biswas P. Path integral description of polymers using fractional Brownian walks Journal of Chemical Physics. 99: 9230-9236. DOI: 10.1063/1.465539  0.688
1993 Cherayil BJ. Critical phenomena in polymer solutions: Scaling of the free energy Journal of Chemical Physics. 98: 9126-9133. DOI: 10.1063/1.464420  0.401
1992 Cherayil BJ. Stretched exponential relaxation in polymer dynamics Journal of Chemical Physics. 97: 2090-2094. DOI: 10.1063/1.463147  0.406
1992 Cherayil BJ. Phase separation in solutions of binary polymer mixtures The Journal of Chemical Physics. 96: 9173-9179. DOI: 10.1063/1.462227  0.399
1991 Cherayil BJ. Phase separation in polymer solutions near the critical point Journal of Chemical Physics. 95: 2135-2142. DOI: 10.1063/1.461012  0.411
1991 Kostrowicki J, Piela L, Cherayil BJ, Scheraga HA. Performance of the diffusion equation method in searches for optimum structures of clusters of Lennard-Jones atoms The Journal of Physical Chemistry. 95: 4113-4119. DOI: 10.1021/J100163A040  0.385
1990 Hu Y, MacInnis JM, Cherayil BJ, Fleming GR, Freed KF, Perico A. Polypeptide dynamics: Experimental tests of an optimized Rouse–Zimm type model The Journal of Chemical Physics. 93: 822-836. DOI: 10.1063/1.459452  0.523
1990 Cherayil BJ. Equilibrium dimensions of polymers in quenched disorder Journal of Chemical Physics. 92: 6246-6254. DOI: 10.1063/1.458349  0.447
1989 Goldstein RE, Cherayil BJ. Continuum theory of critical phenomena in polymer solutions: Formalism and mean field approximation Journal of Chemical Physics. 90: 7448-7460. DOI: 10.1063/1.456225  0.439
1989 McMullen WE, Freed KF, Cherayil BJ. Apparent radius of gyration of diblock copolymers Macromolecules. 22: 1853-1862. DOI: 10.1021/Ma00194A057  0.37
1988 Cherayil BJ, Freed KF. Semidilute good solvent solutions of polymers in a box. Finite size corrections by renormalization group methods The Journal of Chemical Physics. 88: 7851-7861. DOI: 10.1063/1.454299  0.548
1988 Cherayil BJ, Freed KF. The Flory .chi. parameter and phase separation in semidilute polymer mixtures: a renormalization group study Macromolecules. 21: 3204-3216. DOI: 10.1021/Ma00189A014  0.49
1987 Cherayil BJ, Douglas JF, Freed KF. Effect of residual interactions on polymer properties near the theta point. II. Higher moments and comparison with Monte Carlo calculations The Journal of Chemical Physics. 87: 3089-3098. DOI: 10.1063/1.453046  0.575
1987 Cherayil BJ, Kholodenko AL, Freed KF. Semidilute polymer solutions in the theta domain: A renormalization group study The Journal of Chemical Physics. 86: 7204-7217. DOI: 10.1063/1.452322  0.519
1987 Cherayil BJ, Douglas JF, Freed KF. Change of a flexible polymer's free energy due to excluded volume, molecular architecture and the presence of boundaries Macromolecules. 20: 1345-1353. DOI: 10.1021/Ma00172A030  0.518
1986 Cherayil BJ, Bawendi MG, Miyake A, Freed KF. Osmotic pressure of star and ring polymers in semidilute solution Macromolecules. 19: 2770-2778. DOI: 10.1021/Ma00165A019  0.545
1985 Cherayil BJ, Douglas JF, Freed KF. Effect of residual interactions on polymer properties near the theta point The Journal of Chemical Physics. 83: 5293-5310. DOI: 10.1063/1.449692  0.541
1985 Douglas JF, Cherayil BJ, Freed KF. Polymers in two dimensions: renormalization group study using three-parameter model Macromolecules. 18: 2455-2463. DOI: 10.1021/Ma00154A020  0.508
1985 Cherayil BJ, Douglas JF, Freed KF. Non-Gaussian corrections at the .THETA. point: comparison between theory, experiment, and numerical simulations Macromolecules. 18: 821-823. DOI: 10.1021/Ma00146A041  0.44
Show low-probability matches.