Warren R. Zipfel - Publications

Affiliations: 
Cornell University, Ithaca, NY, United States 
Area:
Biomedical Engineering

155 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Roberts TC, Kushner M, Crowley JC, Ozer A, Wang J, Ray J, Lis JT, Zipfel WR. Nanoscale photobiotinylation, pulldown and sequencing of region-specific DNA from intact cells. Biorxiv : the Preprint Server For Biology. PMID 38105945 DOI: 10.1101/2023.12.04.569951  0.493
2023 Tan ML, Jenkins-Johnston N, Huang S, Schutrum B, Vadhin S, Adhikari A, Williams RM, Zipfel WR, Lammerding J, Varner JD, Fischbach C. Endothelial cells metabolically regulate breast cancer invasion toward a microvessel. Apl Bioengineering. 7: 046116. PMID 38058993 DOI: 10.1063/5.0171109  0.484
2023 Williams RM, Bloom JC, Robertus CM, Recknagel AK, Putnam D, Schimenti JC, Zipfel WR. Practical strategies for robust and inexpensive imaging of aqueous-cleared tissues. Journal of Microscopy. PMID 37413663 DOI: 10.1111/jmi.13213  0.583
2023 Grodner B, Shi H, Farchione O, Vill AC, Ntekas I, Diebold PJ, Zipfel WR, Brito IL, De Vlaminck I. Spatial Mapping of Mobile Genetic Elements and their Cognate Hosts in Complex Microbiomes. Biorxiv : the Preprint Server For Biology. PMID 37333098 DOI: 10.1101/2023.06.09.544291  0.506
2022 Kailass K, Sadovski O, Zipfel WR, Beharry AA. Two-Photon Photodynamic Therapy Targeting Cancers with Low Carboxylesterase 2 Activity Guided by Ratiometric Fluorescence. Journal of Medicinal Chemistry. PMID 35700557 DOI: 10.1021/acs.jmedchem.1c01965  0.523
2022 Colville M, Park S, Singh A, Paszek M, Zipfel WR. Azimuthal Beam Scanning Microscope Design and Implementation for Axial Localization with Scanning Angle Interference Microscopy. Methods in Molecular Biology (Clifton, N.J.). 2393: 127-152. PMID 34837177 DOI: 10.1007/978-1-0716-1803-5_7  0.545
2021 Manzer ZA, Ghosh S, Jacobs ML, Krishnan S, Zipfel WR, Piñeros M, Kamat NP, Daniel S. Cell-Free Synthesis of a Transmembrane Mechanosensitive Channel Protein into a Hybrid-Supported Lipid Bilayer. Acs Applied Bio Materials. 4: 3101-3112. PMID 35014398 DOI: 10.1021/acsabm.0c01482  0.499
2021 Digby EM, Ma T, Zipfel WR, Milstein JN, Beharry AA. Highly Potent Photoinactivation of Bacteria Using a Water-Soluble, Cell-Permeable, DNA-Binding Photosensitizer. Acs Infectious Diseases. 7: 3052-3061. PMID 34617443 DOI: 10.1021/acsinfecdis.1c00313  0.523
2021 Jain P, Liu W, Zhu S, Chang CY, Melkonian J, Rockwell FE, Pauli D, Sun Y, Zipfel WR, Holbrook NM, Riha SJ, Gore MA, Stroock AD. A minimally disruptive method for measuring water potential in planta using hydrogel nanoreporters. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34074748 DOI: 10.1073/pnas.2008276118  0.494
2021 Illava G, Jayne R, Finke AD, Closs D, Zeng W, Milano SK, Huang Q, Kriksunov I, Sidorenko P, Wise FW, Zipfel WR, Apker BA, Thorne RE. Integrated sample-handling and mounting system for fixed-target serial synchrotron crystallography. Acta Crystallographica. Section D, Structural Biology. 77: 628-644. PMID 33950019 DOI: 10.1107/S2059798321001868  0.492
2021 Zipfel W, Xu C, Elson E, Maiti S. Memorial Viewpoint for Watt W. Webb: An Experimentalist's Experimentalist. The Journal of Physical Chemistry. B. PMID 33622036 DOI: 10.1021/acs.jpcb.1c01045  0.446
2020 Shi H, Shi Q, Grodner B, Lenz JS, Zipfel WR, Brito IL, De Vlaminck I. Highly multiplexed spatial mapping of microbial communities. Nature. PMID 33268897 DOI: 10.1038/s41586-020-2983-4  0.539
2020 Singh A, Van Slyke AL, Sirenko M, Song A, Kammermeier PJ, Zipfel WR. Stoichiometric analysis of protein complexes by cell fusion and single molecule imaging. Scientific Reports. 10: 14866. PMID 32913201 DOI: 10.1038/S41598-020-71630-6  0.586
2020 Kuo J, Goudge MC, Metzloff AE, Huang LT, Colville MJ, Park S, Zipfel WR, Paszek MJ. Litmus-Body: a Molecularly Targeted Sensor for Cell-Surface pH Measurements. Acs Sensors. PMID 32337979 DOI: 10.1021/Acssensors.9B02080  0.552
2020 Hu A, Keresztes I, MacMillan SN, Yang Y, Ding E, Zipfel WR, DiStasio RA, Babich JW, Wilson JJ. Oxyaapa: A Picolinate-Based Ligand with Five Oxygen Donors that Strongly Chelates Lanthanides. Inorganic Chemistry. PMID 32216281 DOI: 10.1021/Acs.Inorgchem.0C00372  0.538
2019 Colville MJ, Park S, Zipfel WR, Paszek MJ. High-speed device synchronization in optical microscopy with an open-source hardware control platform. Scientific Reports. 9: 12188. PMID 31434941 DOI: 10.1038/S41598-019-48455-Z  0.593
2018 McCoy MG, Wei JM, Choi S, Goerger JP, Zipfel W, Fischbach C. Collagen Fiber Orientation Regulates 3D Vascular Network Formation and Alignment. Acs Biomaterials Science & Engineering. 4: 2967-2976. PMID 33435017 DOI: 10.1021/acsbiomaterials.8b00384  0.492
2018 Lidon P, Marker SC, Wilson JJ, Williams RM, Zipfel WR, Stroock AD. Enhanced oxygen solubility in metastable water under tension. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 30221943 DOI: 10.1021/Acs.Langmuir.8B02408  0.527
2018 Holmes HL, Wilson B, Goerger JP, Silverberg JL, Cohen I, Zipfel WR, Fortier LA. Facilitated recruitment of mesenchymal stromal cells by bone marrow concentrate and platelet rich plasma. Plos One. 13: e0194567. PMID 29566102 DOI: 10.1371/Journal.Pone.0194567  0.547
2018 Marker SC, MacMillan SN, Zipfel WR, Li Z, Ford PC, Wilson JJ. Photoactivated in Vitro Anticancer Activity of Rhenium(I) Tricarbonyl Complexes Bearing Water-Soluble Phosphines. Inorganic Chemistry. PMID 29323880 DOI: 10.1021/Acs.Inorgchem.7B02747  0.541
2018 McCoy MG, Wei JM, Choi S, Goerger JP, Zipfel W, Fischbach C. Collagen Fiber Orientation Regulates 3D Vascular Network Formation and Alignment Acs Biomaterials Science & Engineering. 4: 2967-2976. DOI: 10.1021/Acsbiomaterials.8B00384  0.537
2018 Van Slyke AL, Singth A, Deshmukh N, Kammermeier PJ, Zipfel WR. Investigating the Heteromerization of Metabotropic Glutamate Receptors using a Novel Single Molecule Imaging Method Biophysical Journal. 114: 531a. DOI: 10.1016/J.Bpj.2017.11.2903  0.565
2018 Wang J, Singh A, Zipfel W. A Protein Tag-Specific Aptamer for Use in Dstorm and Paint Based Super-Resolution Imaging Biophysical Journal. 114: 529a. DOI: 10.1016/J.Bpj.2017.11.2896  0.594
2018 Kushner M, Wang J, Ozer A, Ray J, Lis J, Zipfel W. High-Resolution Locus-Specific Mapping of Chromatin Contacts using Two-Photon Photoactivated DNA Cross-Linking Biophysical Journal. 114: 255a. DOI: 10.1016/J.Bpj.2017.11.1416  0.542
2017 Michaudel Q, Chauvire T, Kottisch V, Supej MJ, Stawiasz KJ, Shen L, Zipfel WR, Abruña HD, Freed JH, Fors BP. Mechanistic Insight into the Photocontrolled Cationic Polymerization of Vinyl Ethers. Journal of the American Chemical Society. PMID 28985061 DOI: 10.1021/Jacs.7B09539  0.538
2017 Zipfel WR, Singh A, Sirenko M, Song A, Kammermeier P. An Improved Single Molecule Imaging Vivo Method for In Vivo Stoichiometric and Functional Analysis of Protein Complexes Biophysical Journal. 112: 150a. DOI: 10.1016/J.Bpj.2016.11.821  0.586
2016 Lukk T, Gillilan RE, Szebenyi DM, Zipfel WR. A visible-light-excited fluorescence method for imaging protein crystals without added dyes. Journal of Applied Crystallography. 49: 234-240. PMID 26937240 DOI: 10.1107/S160057671502419X  0.594
2016 Migone FF, Cowan RG, Williams RM, Gorse KJ, Zipfel WR, Quirk SM. In vivo imaging reveals an essential role of vasoconstriction in rupture of the ovarian follicle at ovulation. Proceedings of the National Academy of Sciences of the United States of America. PMID 26842836 DOI: 10.1073/Pnas.1512304113  0.554
2016 Wang J, Singh A, Cupri Rinaldi F, Lis J, Bogdanove A, Zipfel W. Visualizing Specific Genomic Loci using Fluorescently Labeled Transcription Activator-Like Effectors Biophysical Journal. 110: 649a-650a. DOI: 10.1016/J.Bpj.2015.11.3475  0.583
2016 Van Slyke AL, Singh A, Cupri Rinaldi F, Bogdanove AJ, Lis JT, Zipfel WR. Investigating the Kinetics and Specificity of Transcription Activator-Like Effector Binding using High Throughput Single Molecule Imaging Biophysical Journal. 110: 640a. DOI: 10.1016/J.Bpj.2015.11.3427  0.562
2016 Sirenko M, Singh A, Song A, Kammermeier P, Zipfel W. Determining the Stoichiometry of EGFR and ADRβ2 using Cell Fusion and Single Molecule Imaging Biophysical Journal. 110: 640a. DOI: 10.1016/J.Bpj.2015.11.3424  0.582
2016 Kushner M, Van Slyke A, Rinaldi F, Singh A, Lis J, Bogdanove A, Zipfel W. Examining Tale Protein Binding Kinetics and Site Competition using Single Molecule Imaging Biophysical Journal. 110: 238a. DOI: 10.1016/J.Bpj.2015.11.1310  0.561
2015 Singh A, McMullen JD, Doris EA, Zipfel WR. Comparison of objective lenses for multiphoton microscopy in turbid samples. Biomedical Optics Express. 6: 3113-27. PMID 26309771 DOI: 10.1364/Boe.6.003113  0.794
2015 O'Dell RS, Cameron DA, Zipfel WR, Olson EC. Reelin Prevents Apical Neurite Retraction during Terminal Translocation and Dendrite Initiation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 10659-74. PMID 26224852 DOI: 10.1523/Jneurosci.1629-15.2015  0.541
2015 Sattarzadeh A, Saberianfar R, Zipfel WR, Menassa R, Hanson MR. Green to red photoconversion of GFP for protein tracking in vivo. Scientific Reports. 5: 11771. PMID 26148899 DOI: 10.1038/Srep11771  0.589
2015 Xu C, Zipfel WR. Multiphoton excitation of fluorescent probes. Cold Spring Harbor Protocols. 2015: 250-8. PMID 25734074 DOI: 10.1101/Pdb.Top086116  0.569
2015 Van Slyke AL, Singh A, Wakefield D, Mahat DB, Buckley MS, Baird B, Lis JT, Zipfel WR. Investigating the Kinetics of HSF Binding Using High Throughput Single Molecule Imaging Biophysical Journal. 108: 162a-163a. DOI: 10.1016/J.Bpj.2014.11.897  0.567
2014 Zipfel W, Owens TG. Calculation of absolute photosystem I absorption cross-sections from P700 photo-oxidation kinetics. Photosynthesis Research. 29: 23-35. PMID 24415037 DOI: 10.1007/Bf00035203  0.545
2014 Buckley MS, Kwak H, Zipfel WR, Lis JT. Kinetics of promoter Pol II on Hsp70 reveal stable pausing and key insights into its regulation. Genes & Development. 28: 14-9. PMID 24395245 DOI: 10.1101/Gad.231886.113  0.513
2014 Novakofski KD, Williams RM, Fortier LA, Mohammed HO, Zipfel WR, Bonassar LJ. Identification of cartilage injury using quantitative multiphoton microscopy. Osteoarthritis and Cartilage / Oars, Osteoarthritis Research Society. 22: 355-62. PMID 24185113 DOI: 10.1016/J.Joca.2013.10.008  0.565
2014 Van Slyke AL, Wang J, Singh A, Pollack L, Zipfel WR. Fast Binding Kinetics of RNA Aptamers Measured using a Novel Microfluidic Mixer Biophysical Journal. 106: 796a. DOI: 10.1016/J.Bpj.2013.11.4364  0.56
2014 Singh A, Doris EA, Song A, Zipfel WR. An Optimized Azimuthal Scanning Platform for TIRF and HILO Imaging Biophysical Journal. 106: 402a. DOI: 10.1016/J.Bpj.2013.11.2265  0.633
2014 Wang J, Singh A, Ozer A, Lis J, Zipfel W. Super-Resolution Imaging of GFP Expressing Cells using Dye Labeled GFP Aptamers Biophysical Journal. 106: 401a. DOI: 10.1016/J.Bpj.2013.11.2259  0.612
2014 Penterman SJ, Singh A, Zipfel WR, Liddell Watson CM. Anisometric Colloidal Fullerene Rod and Platelet Solvates with Enhanced Photoluminescence Advanced Optical Materials. 2: 1024-1030. DOI: 10.1002/Adom.201400266  0.513
2013 Bu P, Chen KY, Chen JH, Wang L, Walters J, Shin YJ, Goerger JP, Sun J, Witherspoon M, Rakhilin N, Li J, Yang H, Milsom J, Lee S, Zipfel W, et al. A microRNA miR-34a-regulated bimodal switch targets Notch in colon cancer stem cells. Cell Stem Cell. 12: 602-15. PMID 23642368 DOI: 10.1016/J.Stem.2013.03.002  0.522
2013 Byrnes LJ, Singh A, Szeto K, Benvin NM, O'Donnell JP, Zipfel WR, Sondermann H. Structural basis for conformational switching and GTP loading of the large G protein atlastin. The Embo Journal. 32: 369-84. PMID 23334294 DOI: 10.1038/Emboj.2012.353  0.538
2013 Migone FF, Cowan RG, Williams RM, Zipfel WR, Quirk SM. Multiphoton microscopy as a tool to study ovarian vasculature in vivo Intravital. 2: e24334. DOI: 10.4161/intv.24334  0.512
2013 Zipfel W. Feasibility of using Nonlinear Excitation in Human Clinical Imaging Applications Frontiers in Optics. DOI: 10.1364/Fio.2013.Fm4A.3  0.602
2013 Durand M, Aggarwal A, Robinson B, Sooriakumaran P, Srivastava A, Zipfel W, Amiel J, Tewari A. La microscopie multiphotonique in vivo en temps reel : une imagerie prometteuse pour l’analyse histologique virutelle des tissus frais sans biopsie Progres En Urologie. 23: 1114. DOI: 10.1016/J.Purol.2013.08.221  0.546
2013 Song A, Gao H, Singh A, Zipfel WR. Accurate EMCCD Photoelectron Calibration for Single Molecule Imaging Techniques Biophysical Journal. 104: 666a. DOI: 10.1016/J.Bpj.2012.11.3678  0.586
2012 Khan I, Gillilan R, Kriksunov I, Williams R, Zipfel WR, Englich U. Confocal microscopy on the beamline: novel three-dimensional imaging and sample positioning. Journal of Applied Crystallography. 45: 936-943. PMID 22997474 DOI: 10.1107/S002188981203470X  0.622
2012 O'Dell RS, Ustine CJ, Cameron DA, Lawless SM, Williams RM, Zipfel WR, Olson EC. Layer 6 cortical neurons require Reelin-Dab1 signaling for cellular orientation, Golgi deployment, and directed neurite growth into the marginal zone. Neural Development. 7: 25. PMID 22770513 DOI: 10.1186/1749-8104-7-25  0.527
2012 Jain M, Robinson BD, Scherr DS, Sterling J, Lee MM, Wysock J, Rubin MA, Maxfield FR, Zipfel WR, Webb WW, Mukherjee S. Multiphoton microscopy in the evaluation of human bladder biopsies. Archives of Pathology & Laboratory Medicine. 136: 517-26. PMID 22540300 DOI: 10.5858/Arpa.2011-0147-Oa  0.588
2012 Choi NW, Verbridge SS, Williams RM, Chen J, Kim JY, Schmehl R, Farnum CE, Zipfel WR, Fischbach C, Stroock AD. Phosphorescent nanoparticles for quantitative measurements of oxygen profiles in vitro and in vivo. Biomaterials. 33: 2710-22. PMID 22240511 DOI: 10.1016/J.Biomaterials.2011.11.048  0.546
2012 Shui B, Ozer A, Zipfel W, Sahu N, Singh A, Lis JT, Shi H, Kotlikoff MI. RNA aptamers that functionally interact with green fluorescent protein and its derivatives. Nucleic Acids Research. 40: e39. PMID 22189104 DOI: 10.1093/Nar/Gkr1264  0.547
2012 Degala S, Williams R, Zipfel W, Bonassar LJ. Calcium signaling in response to fluid flow by chondrocytes in 3D alginate culture. Journal of Orthopaedic Research : Official Publication of the Orthopaedic Research Society. 30: 793-9. PMID 22042743 DOI: 10.1002/Jor.21571  0.542
2012 Migone FF, Cowan RG, Williams RM, Zipfel WR, Quirk SM. Identification of Vascular Changes Required for Ovulation Using Multiphoton Microscopy. Biology of Reproduction. 87: 506-506. DOI: 10.1093/Biolreprod/87.S1.506  0.537
2012 Durand M, Aggarwal A, Robinson B, Sooriakumaran P, Groover S, Srivastava A, Mtui J, Brooks D, Flomenbaum D, Sterling J, Leung R, Herman M, Zipfel W, Webb W, Maxfield F, et al. L’imagerie multiphotonique in vivo de la capsule prostatique : un outil prometteur pour la visualisation peropératoire des nerfs périprostatiques en temps réel ProgrèS En Urologie. 22: 743-744. DOI: 10.1016/J.Purol.2012.08.012  0.508
2012 Singh A, Gao H, Song A, Williams R, Zipfel WR. Accurate Quantification Methods for Single Molecule Localization Biophysical Journal. 102: 721a. DOI: 10.1016/J.Bpj.2011.11.3912  0.596
2012 Pabit SA, Sutton JL, Chen H, Zipfel WR, Webb WW, Pollack L. Sub-Millisecond RNA Collapse Observed in a Microfluidic Mixer Biophysical Journal. 102: 645a. DOI: 10.1016/J.Bpj.2011.11.3509  0.549
2011 Wang Q, Byrnes LJ, Shui B, Röhrig UF, Singh A, Chudakov DM, Lukyanov S, Zipfel WR, Kotlikoff MI, Sondermann H. Molecular mechanism of a green-shifted, pH-dependent red fluorescent protein mKate variant. Plos One. 6: e23513. PMID 21887263 DOI: 10.1371/Journal.Pone.0023513  0.591
2011 Tewari AK, Shevchuk MM, Sterling J, Grover S, Herman M, Yadav R, Mudalair K, Srivastava A, Rubin MA, Zipfel WR, Maxfield FR, Xu C, Webb WW, Mukherjee S. Multiphoton microscopy for structure identification in human prostate and periprostatic tissue: implications in prostate cancer surgery. Bju International. 108: 1421-9. PMID 21443651 DOI: 10.1111/J.1464-410X.2011.10169.X  0.556
2011 McMullen JD, Kwan AC, Williams RM, Zipfel WR. Enhancing collection efficiency in large field of view multiphoton microscopy. Journal of Microscopy. 241: 119-24. PMID 21118215 DOI: 10.1111/J.1365-2818.2010.03419.X  0.779
2011 Degala S, Zipfel WR, Bonassar LJ. Chondrocyte calcium signaling in response to fluid flow is regulated by matrix adhesion in 3-D alginate scaffolds. Archives of Biochemistry and Biophysics. 505: 112-7. PMID 20705051 DOI: 10.1016/J.Abb.2010.08.003  0.536
2011 Mukherjee S, Jain M, Robinson BD, Sterling J, Scherr DS, Tewari AK, Maxfield FR, Zipfel WR, Webb WW. Abstract 4884: Toward an annotated digital multiphoton microscopy (MPM) histology atlas of fresh human and rodent tissue for guidance during cancer diagnosis and margin assessments Cancer Research. 71: 4884-4884. DOI: 10.1158/1538-7445.Am2011-4884  0.61
2011 Singh A, Lee P, Shelby SA, Williams RM, Zipfel WR. Analysis of Spot Detection and Localization Algorithms for PALM and STORM Biophysical Journal. 100: 141a. DOI: 10.1016/J.Bpj.2010.12.976  0.608
2010 Dela Cruz JM, McMullen JD, Williams RM, Zipfel WR. Feasibility of using multiphoton excited tissue autofluorescence for in vivo human histopathology. Biomedical Optics Express. 1: 1320-1330. PMID 21258552 DOI: 10.1364/Boe.1.001320  0.793
2010 Zobeck KL, Buckley MS, Zipfel WR, Lis JT. Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells. Molecular Cell. 40: 965-75. PMID 21172661 DOI: 10.1016/J.Molcel.2010.11.022  0.557
2010 Kim SA, Sanabria H, Digman MA, Gratton E, Schwille P, Zipfel WR, Waxham MN. Quantifying translational mobility in neurons: comparison between current optical techniques. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 16409-16. PMID 21147979 DOI: 10.1523/Jneurosci.3063-10.2010  0.533
2010 Williams RM, Flesken-Nikitin A, Ellenson LH, Connolly DC, Hamilton TC, Nikitin AY, Zipfel WR. Strategies for high-resolution imaging of epithelial ovarian cancer by laparoscopic nonlinear microscopy. Translational Oncology. 3: 181-94. PMID 20563260 DOI: 10.1593/Tlo.09310  0.596
2010 McMullen JD, Zipfel WR. A multiphoton objective design with incorporated beam splitter for enhanced fluorescence collection. Optics Express. 18: 5390-8. PMID 20389554 DOI: 10.1364/Oe.18.005390  0.767
2010 Bowles RD, Williams RM, Zipfel WR, Bonassar LJ. Self-assembly of aligned tissue-engineered annulus fibrosus and intervertebral disc composite via collagen gel contraction. Tissue Engineering. Part A. 16: 1339-48. PMID 19905878 DOI: 10.1089/Ten.Tea.2009.0442  0.553
2010 Williams RM, Flesken-Nikitin A, Ellenson LH, Connolly DC, Hamilton TC, Nikitin AY, Zipfel WR. Strategies for high-resolution imaging of epithelial ovarian cancer by laparoscopic nonlinear microscopy Translational Oncology. 3: 181-194. DOI: 10.1593/tlo.09310  0.525
2010 Zipfel W, Bowles R, Bonassar L, Williams R. High Resolution Characterization of Bioengineered Tissue using Multiphoton Microscopy Microscopy and Microanalysis. 16: 1026-1027. DOI: 10.1017/S1431927610063002  0.571
2010 Tewari A, Herman M, Mukherjee S, Yadav R, Grover S, Mudaliar K, El Douaihy Y, Maxfield F, Rubin M, Srivastava A, Peters D, Zipfel WR, Ye D, Tan G, Leung R, et al. 1345 AUTOFLUORESCENCE MICROSCOPY OF PERIPROSTATIC LYMPHATIC TISSUE AND CORRELATION WITH CONVENTIONAL HISTOPATHOLOGY IMAGING Journal of Urology. 183. DOI: 10.1016/J.Juro.2010.02.951  0.604
2010 Herman M, Tewari A, Mukherjee S, Yadav R, Maxfield F, Grover S, Mudaliar K, El Douaihy Y, Srivastava A, Rubin M, Zipfel WR, Peters D, Leung R, Shevchuk M, Ye D, et al. 2143 REAL TIME DELINEATION PROSTATIC ARCHITECTURE USING ROBO-MICROSCOPY PROJECT TWO PHOTON LASER EXCITATION IMAGING IN VISUALIZATION OF HUMAN PROSTATIC TISSUE Journal of Urology. 183. DOI: 10.1016/J.Juro.2010.02.2244  0.566
2010 Tewari A, Mukherjee S, Herman M, Yadav R, Grover S, Mudaliar K, El Douaihy Y, Rubin M, Srivastava A, Peters D, Maxfield F, Zipfel WR, Leung R, Shevchuk M, Ye D, et al. 1444 PERI PROSTATIC NERVE MAPPING: UTILITY OF REAL TIME 780-NM LASER EXCITATION IMAGING IN VISUALIZATION OF HUMAN CAVERNOUS NERVES Journal of Urology. 183. DOI: 10.1016/J.Juro.2010.02.1137  0.555
2010 Singh A, McMullen JD, Zipfel WR. A Comparison of Objective Lenses for Multiphoton Microscopy: Improved Epifluorescence Collection from Turbid Samples Biophysical Journal. 98: 178a. DOI: 10.1016/J.Bpj.2009.12.951  0.788
2010 Spiegel ET, Lee P, Toth L, Zipfel W. Studying Fluorescent Proteins in Living Cells: An Application for Segmented Fluorescence Correlation Spectroscopy Biophysical Journal. 98: 584a. DOI: 10.1016/J.Bpj.2009.12.3176  0.611
2010 Cruz JMD, McMullen JD, Williams RM, Zipfel WR. Assessing the Mutagenicity Potential of Multiphoton Excitation during Imaging of Intrinsic Fluorescence from Cells and Tissues Biophysical Journal. 98: 576a. DOI: 10.1016/J.Bpj.2009.12.3129  0.795
2010 Williams RM, Zipfel WR. Adaptive Phase Modulation for Multiphoton Microscopy Biophysical Journal. 98: 215a. DOI: 10.1016/J.Bpj.2009.12.1159  0.618
2009 Jhaveri SJ, McMullen JD, Sijbesma R, Tan LS, Zipfel W, Ober CK. Direct three-dimensional microfabrication of hydrogels via two-photon lithography in aqueous solution. Chemistry of Materials : a Publication of the American Chemical Society. 21: 2003-2006. PMID 20160917 DOI: 10.1021/Cm803174E  0.762
2009 Bago B, Zipfel W, Williams RM, Piché Y. Nuclei of symbiotic arbuscular mycorrhizal fungi as revealed by in vivo two-photon microscopy. Protoplasma. 209: 77-89. PMID 18987796 DOI: 10.1007/Bf01415703  0.557
2009 Choi NW, Verbridge SS, Williams RM, Park KY, Zipfel WR, Fischbach C, Stroock AD. Oxygen-sensing microfluidic scaffolds Proceedings of the 7th International Conference On Nanochannels, Microchannels, and Minichannels 2009, Icnmm2009. 1185-1189. DOI: 10.1115/ICNMM2009-82292  0.469
2009 Steidl L, Jhaveri SJ, Ayothi R, Sha J, McMullen JD, Ng SYC, Zipfel WR, Zentel R, Ober CK. Non-ionic photo-acid generators for applications in two-photon lithography Journal of Materials Chemistry. 19: 505-513. DOI: 10.1039/B816434G  0.765
2009 Spiegel ET, Jones P, McLean P, Hyman B, Zipfel WR. Probing the effect of Heat Shock Protein 70 on the aggregation of α-Synuclein Biophysical Journal. 96: 92a. DOI: 10.1016/J.Bpj.2008.12.381  0.563
2009 McMullen JD, Zipfel W. A Scheme for Increasing the Collection Efficiency of Multiphoton Microscopy Biophysical Journal. 96: 639a. DOI: 10.1016/J.Bpj.2008.12.3379  0.795
2009 Williams RM, Zipfel WR. Compensation Of Tissue-induced PSF Aberrations Using Adaptive Phase Modulation Biophysical Journal. 96: 375a. DOI: 10.1016/J.Bpj.2008.12.2815  0.619
2009 McMullen JD, Abramovitch RB, Russell DG, Zipfel WR. Monitoring the Granulomal Micro-environment in a Monkey Model of Tuberculosis Using a Novel Fluorescence Bronchoscope Biophysical Journal. 96: 297a. DOI: 10.1016/J.Bpj.2008.12.1473  0.772
2008 Cheshire AM, Kerman BE, Zipfel WR, Spector AA, Andrew DJ. Kinetic and mechanical analysis of live tube morphogenesis. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 237: 2874-88. PMID 18816822 DOI: 10.1002/Dvdy.21709  0.598
2008 Park HY, Kim SA, Korlach J, Rhoades E, Kwok LW, Zipfel WR, Waxham MN, Webb WW, Pollack L. Conformational changes of calmodulin upon Ca2+ binding studied with a microfluidic mixer. Proceedings of the National Academy of Sciences of the United States of America. 105: 542-7. PMID 18178620 DOI: 10.1073/Pnas.0710810105  0.539
2008 Rogart JN, Nagata J, Loeser CS, Roorda RD, Aslanian H, Robert ME, Zipfel WR, Nathanson MH. Multiphoton imaging can be used for microscopic examination of intact human gastrointestinal mucosa ex vivo. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. 6: 95-101. PMID 18065276 DOI: 10.1016/J.Cgh.2007.10.008  0.624
2007 Choi J, Burns AA, Williams RM, Zhou Z, Flesken-Nikitin A, Zipfel WR, Wiesner U, Nikitin AY. Core-shell silica nanoparticles as fluorescent labels for nanomedicine. Journal of Biomedical Optics. 12: 064007. PMID 18163823 DOI: 10.1117/1.2823149  0.605
2007 Flesken-Nikitin A, Toshkov I, Naskar J, Tyner KM, Williams RM, Zipfel WR, Giannelis EP, Nikitin AY. Toxicity and biomedical imaging of layered nanohybrids in the mouse. Toxicologic Pathology. 35: 806-12. PMID 17943654 DOI: 10.1080/01926230701584239  0.587
2007 Croix CS, Zipfel WR, Watkins SC. Potential solutions for confocal imaging of living animals. Biotechniques. 43: 14-9. PMID 17933097 DOI: 10.2144/000112509  0.542
2007 Kloppenburg P, Zipfel WR, Webb WW, Harris-Warrick RM. Heterogeneous effects of dopamine on highly localized, voltage-induced Ca2+ accumulation in identified motoneurons. Journal of Neurophysiology. 98: 2910-7. PMID 17728385 DOI: 10.1152/Jn.00660.2007  0.527
2007 Williams RM, Zipfel WR, Tinsley ML, Farnum CE. Solute transport in growth plate cartilage: in vitro and in vivo. Biophysical Journal. 93: 1039-50. PMID 17496046 DOI: 10.1529/Biophysj.106.097675  0.57
2007 Williams RM, Flesken‐Nikitin A, Nikitin AY, Zipfel WR. Multiphoton microscopy of intrinsic tissue emissions for cancer research The Faseb Journal. 21. DOI: 10.1096/Fasebj.21.5.A601  0.552
2006 Rizzo MA, Springer G, Segawa K, Zipfel WR, Piston DW. Optimization of pairings and detection conditions for measurement of FRET between cyan and yellow fluorescent proteins. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 12: 238-54. PMID 17481360 DOI: 10.1017/S1431927606060235  0.609
2006 Tallini YN, Shui B, Greene KS, Deng KY, Doran R, Fisher PJ, Zipfel W, Kotlikoff MI. BAC transgenic mice express enhanced green fluorescent protein in central and peripheral cholinergic neurons. Physiological Genomics. 27: 391-7. PMID 16940431 DOI: 10.1152/Physiolgenomics.00092.2006  0.554
2006 Park HY, Qiu X, Rhoades E, Korlach J, Kwok LW, Zipfel WR, Webb WW, Pollack L. Achieving uniform mixing in a microfluidic device: hydrodynamic focusing prior to mixing. Analytical Chemistry. 78: 4465-73. PMID 16808455 DOI: 10.1021/Ac060572N  0.568
2006 Ji G, Feldman M, Doran R, Zipfel W, Kotlikoff MI. Ca2+ -induced Ca2+ release through localized Ca2+ uncaging in smooth muscle. The Journal of General Physiology. 127: 225-35. PMID 16505145 DOI: 10.1085/Jgp.200509422  0.523
2006 Farnum CE, Lenox M, Zipfel W, Horton W, Williams R. In vivo delivery of fluoresceinated dextrans to the murine growth plate: imaging of three vascular routes by multiphoton microscopy. The Anatomical Record. Part a, Discoveries in Molecular, Cellular, and Evolutionary Biology. 288: 91-103. PMID 16342207 DOI: 10.1002/Ar.A.20272  0.568
2006 Zipfel W. On the Versatility of Nonlinear Microscopy Frontiers in Optics. DOI: 10.1364/Fio.2006.Fwd1  0.549
2005 Zhu G, van Howe J, Durst M, Zipfel W, Xu C. Simultaneous spatial and temporal focusing of femtosecond pulses. Optics Express. 13: 2153-9. PMID 19495103 DOI: 10.1364/Opex.13.002153  0.566
2005 Yao J, Larson DR, Vishwasrao HD, Zipfel WR, Webb WW. Blinking and nonradiant dark fraction of water-soluble quantum dots in aqueous solution. Proceedings of the National Academy of Sciences of the United States of America. 102: 14284-9. PMID 16169907 DOI: 10.1073/Pnas.0506523102  0.604
2005 Flesken-Nikitin A, Williams RM, Zipfel WR, Webb WW, Nikitin AY. Use of multiphoton imaging for studying cell migration in the mouse. Methods in Molecular Biology (Clifton, N.J.). 294: 335-45. PMID 15576922 DOI: 10.1385/1-59259-860-9:335  0.63
2005 Williams RM, Zipfel WR, Webb WW. Interpreting second-harmonic generation images of collagen I fibrils. Biophysical Journal. 88: 1377-86. PMID 15533922 DOI: 10.1529/Biophysj.104.047308  0.611
2005 Yao J, Larson DR, Zipfel WR, Webb WW. Dark fraction and blinking of water-soluble quantum dots in solution Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5705: 148-151. DOI: 10.1117/12.606131  0.583
2004 Kasischke KA, Vishwasrao HD, Fisher PJ, Zipfel WR, Webb WW. Neural activity triggers neuronal oxidative metabolism followed by astrocytic glycolysis. Science (New York, N.Y.). 305: 99-103. PMID 15232110 DOI: 10.1126/Science.1096485  0.561
2004 Stroh M, Zipfel WR, Williams RM, Ma SC, Webb WW, Saltzman WM. Multiphoton microscopy guides neurotrophin modification with poly(ethylene glycol) to enhance interstitial diffusion. Nature Materials. 3: 489-94. PMID 15208704 DOI: 10.1038/Nmat1159  0.567
2004 Atshaves BP, McIntosh AM, Lyuksyutova OI, Zipfel W, Webb WW, Schroeder F. Liver fatty acid-binding protein gene ablation inhibits branched-chain fatty acid metabolism in cultured primary hepatocytes. The Journal of Biological Chemistry. 279: 30954-65. PMID 15155724 DOI: 10.1074/Jbc.M313571200  0.523
2004 Foquet M, Korlach J, Zipfel WR, Webb WW, Craighead HG. Focal volume confinement by submicrometer-sized fluidic channels. Analytical Chemistry. 76: 1618-26. PMID 15018559 DOI: 10.1021/Ac035088O  0.569
2004 Levene MJ, Dombeck DA, Williams RM, Skoch J, Hickey GA, Kasischke KA, Molloy RP, Ingelsson M, Stern EA, Klucken J, Bacskai BJ, Zipfel WR, Hyman BT, Webb WW. In vivo multiphoton microscopy of deep tissue with gradient index lenses Proceedings of Spie - the International Society For Optical Engineering. 5323: 291-296. DOI: 10.1117/12.537285  0.587
2003 Zipfel WR, Williams RM, Webb WW. Nonlinear magic: multiphoton microscopy in the biosciences. Nature Biotechnology. 21: 1369-77. PMID 14595365 DOI: 10.1038/Nbt899  0.626
2003 Orth RN, Kameoka J, Zipfel WR, Ilic B, Webb WW, Clark TG, Craighead HG. Creating biological membranes on the micron scale: forming patterned lipid bilayers using a polymer lift-off technique. Biophysical Journal. 85: 3066-73. PMID 14581207 DOI: 10.1016/S0006-3495(03)74725-0  0.563
2003 Stroh M, Zipfel WR, Williams RM, Webb WW, Saltzman WM. Diffusion of nerve growth factor in rat striatum as determined by multiphoton microscopy. Biophysical Journal. 85: 581-8. PMID 12829512 DOI: 10.1016/S0006-3495(03)74502-0  0.56
2003 Larson DR, Zipfel WR, Williams RM, Clark SW, Bruchez MP, Wise FW, Webb WW. Water-soluble quantum dots for multiphoton fluorescence imaging in vivo. Science (New York, N.Y.). 300: 1434-6. PMID 12775841 DOI: 10.1126/Science.1083780  0.604
2003 Zipfel WR, Williams RM, Christie R, Nikitin AY, Hyman BT, Webb WW. Live tissue intrinsic emission microscopy using multiphoton-excited native fluorescence and second harmonic generation. Proceedings of the National Academy of Sciences of the United States of America. 100: 7075-80. PMID 12756303 DOI: 10.1073/Pnas.0832308100  0.639
2003 Echevarría W, Leite MF, Guerra MT, Zipfel WR, Nathanson MH. Regulation of calcium signals in the nucleus by a nucleoplasmic reticulum. Nature Cell Biology. 5: 440-6. PMID 12717445 DOI: 10.1038/Ncb980  0.529
2003 Ladewig T, Kloppenburg P, Lalley PM, Zipfel WR, Webb WW, Keller BU. Spatial profiles of store-dependent calcium release in motoneurones of the nucleus hypoglossus from newborn mouse. The Journal of Physiology. 547: 775-87. PMID 12562905 DOI: 10.1111/J.1469-7793.2003.00775.X  0.55
2003 Zipfel WR. Nonlinear excitation in biology: Current applications and future needs Frontiers in Optics. DOI: 10.1364/Fio.2003.Wo1  0.55
2003 Williams RM, Zipfel WR, Webb WW. Second harmonic microscopy of collagen Frontiers in Optics. DOI: 10.1364/Fio.2003.Thee1  0.606
2003 Levene MJ, Dombeck DA, Kasischke KA, Molloy RP, Williams RM, Zipfel WR, Webb WW. GRIN lenses for deep in vivo multiphoton imaging Frontiers in Optics. DOI: 10.1364/Fio.2003.My3  0.593
2002 Ouzounov DG, Moll KD, Foster MA, Zipfel WR, Webb WW, Gaeta AL. Delivery of nanojoule femtosecond pulses through large-core microstructured fibers. Optics Letters. 27: 1513-5. PMID 18026490 DOI: 10.1364/Ol.27.001513  0.543
2002 O'Neill AF, Hagar RE, Zipfel WR, Nathanson MH, Ehrlich BE. Regulation of the type III InsP(3) receptor by InsP(3) and calcium. Biochemical and Biophysical Research Communications. 294: 719-25. PMID 12056830 DOI: 10.1016/S0006-291X(02)00524-7  0.533
2002 Foquet M, Korlach J, Zipfel W, Webb WW, Craighead HG. DNA fragment sizing by single molecule detection in submicrometer-sized closed fluidic channels. Analytical Chemistry. 74: 1415-22. PMID 11922312 DOI: 10.1021/Ac011076W  0.557
2002 Bago B, Zipfel W, Williams RM, Jun J, Arreola R, Lammers PJ, Pfeffer PE, Shachar-Hill Y. Translocation and utilization of fungal storage lipid in the arbuscular mycorrhizal symbiosis. Plant Physiology. 128: 108-24. PMID 11788757 DOI: 10.1104/Pp.010466  0.545
2002 Ouzounov DG, Moll KD, Foster MA, Zipfel WR, Webb W, Gaeta AL. Microstructured Fibers: Delivery of Nanojoule Femtosecond Pulses Through Large-Core Microstructured Fibers Optics and Photonics News. 13: 27. DOI: 10.1364/Opn.13.12.000027  0.517
2002 Bago B, Pfeffer PE, Zipfel W, Lammers P, Shachar-Hill Y. Tracking metabolism and imaging transport in arbuscular mycorrhizal fungi. Metabolism and transport in AM fungi Plant and Soil. 244: 189-197. DOI: 10.1023/A:1020212328955  0.557
2002 Ouzounov D, Homoelle D, Zipfel W, Webb W, Gaeta A, West J, Fajardo J, Koch K. Dispersion measurements of microstructured fibers using femtosecond laser pulses [Opt. Commun. 192 (2001) 219–223] Optics Communications. 205: 227. DOI: 10.1016/S0030-4018(02)01359-7  0.526
2002 Bago B, Pfeffer PE, Zipfel W, Lammers P, Shachar-Hill Y. Tracking metabolism and imaging transport in arbuscular mycorrhizal fungi Plant and Soil. 244: 189-197. DOI: 10.1007/978-94-017-1284-2_18  0.561
2001 Williams RM, Zipfel WR, Webb WW. Multiphoton microscopy in biological research. Current Opinion in Chemical Biology. 5: 603-8. PMID 11578936 DOI: 10.1016/S1367-5931(00)00241-6  0.638
2001 Christie RH, Bacskai BJ, Zipfel WR, Williams RM, Kajdasz ST, Webb WW, Hyman BT. Growth arrest of individual senile plaques in a model of Alzheimer's disease observed by in vivo multiphoton microscopy. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 21: 858-64. PMID 11157072 DOI: 10.1523/Jneurosci.21-03-00858.2001  0.574
2001 Bacskai BJ, Kajdasz ST, Christie RH, Zipfel WR, Williams RM, Kasischke KA, Webb WW, Hyman BT. Chronic imaging of amyloid plaques in the live mouse brain using multiphoton microscopy Proceedings of Spie - the International Society For Optical Engineering. 4262: 125-133. DOI: 10.1117/12.424546  0.524
2001 Ouzounov D, Homoelle D, Zipfel W, Webb WW, Gaeta AL, West JA, Fajardo JC, Koch KW. Dispersion measurements of microstructured fibers using femtosecond laser pulses Optics Communications. 192: 219-223. DOI: 10.1016/S0030-4018(01)01185-3  0.543
2000 Zipfel W. A new-age Hooke book Nature Cell Biology. 2. PMID 11146671 DOI: 10.1038/35046646  0.502
2000 Kloppenburg P, Zipfel WR, Webb WW, Harris-Warrick RM. Highly localized Ca(2+) accumulation revealed by multiphoton microscopy in an identified motoneuron and its modulation by dopamine. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 20: 2523-33. PMID 10729332 DOI: 10.1523/Jneurosci.20-07-02523.2000  0.532
2000 Kloppenburg P, Zipfel WR, Webb WW, Harris-Warrick RM. Highly Localized Ca2+Accumulation Revealed by Multiphoton Microscopy in an Identified Motoneuron and Its Modulation by Dopamine The Journal of Neuroscience. 20: 2523-2533. DOI: 10.1523/JNEUROSCI.20-07-02523.2000  0.481
1999 Brown EB, Wu ES, Zipfel W, Webb WW. Measurement of molecular diffusion in solution by multiphoton fluorescence photobleaching recovery. Biophysical Journal. 77: 2837-49. PMID 10545381 DOI: 10.1016/S0006-3495(99)77115-8  0.604
1999 Caylor CL, Dobrianov I, Lemay SG, Kimmer C, Kriminski S, Finkelstein KD, Zipfel W, Webb WW, Thomas BR, Chernov AA, Thorne RE. Macromolecular impurities and disorder in protein crystals. Proteins. 36: 270-81. PMID 10409821 DOI: 10.1002/(Sici)1097-0134(19990815)36:3<270::Aid-Prot2>3.0.Co;2-N  0.514
1999 Williams RM, Shear JB, Zipfel WR, Maiti S, Webb WW. Mucosal mast cell secretion processes imaged using three-photon microscopy of 5-hydroxytryptamine autofluorescence. Biophysical Journal. 76: 1835-46. PMID 10096882 DOI: 10.1016/S0006-3495(99)77343-1  0.564
1999 Christie RH, Zipfel WR, Williams RM, Webb WW, Hyman BT. IN VIVO MULTIPHOTON IMAGING OF AMYLOID DEPOSITION IN TRANSGENIC MICE Journal of Neuropathology and Experimental Neurology. 58: 560. DOI: 10.1097/00005072-199905000-00215  0.559
1998 Christie RH, Zipfel WR, Williams RM, Webb WW, Hyman BT. MULTIPHOTON IMAGING OF ALZHEIMERʼS DISEASE NEUROPATHOLOGY Journal of Neuropathology and Experimental Neurology. 57: 505. DOI: 10.1097/00005072-199805000-00163  0.571
1998 Bago B, Zipfel W, Williams RM, Chamberland H, Lafontaine JG, Webb WW, Piché Y. In vivo studies on the nuclear behavior of the arbuscular mycorrhizal fungus Gigaspora rosea grown under axenic conditions Protoplasma. 203: 1-15. DOI: 10.1007/Bf01280582  0.59
1997 Köhler RH, Cao J, Zipfel WR, Webb WW, Hanson MR. Exchange of protein molecules through connections between higher plant plastids. Science (New York, N.Y.). 276: 2039-42. PMID 9197266 DOI: 10.1126/Science.276.5321.2039  0.566
1997 Köhler RH, Zipfel WR, Webb WW, Hanson MR. The green fluorescent protein as a marker to visualize plant mitochondria in vivo. The Plant Journal : For Cell and Molecular Biology. 11: 613-21. PMID 9107047 DOI: 10.1046/J.1365-313X.1997.11030613.X  0.592
1997 Maiti S, Shear JB, Williams RM, Zipfel WR, Webb WW. Measuring serotonin distribution in live cells with three-photon excitation. Science (New York, N.Y.). 275: 530-2. PMID 8999797 DOI: 10.1126/Science.275.5299.530  0.62
1997 Zipfel WR, Williams RM, Watt W. Application of Multiphoton Imaging to Study of the Vasculature. Microscopy and Microanalysis. 3: 335-336. DOI: 10.1017/S1431927600008564  0.59
1996 Xu C, Zipfel W, Shear JB, Williams RM, Webb WW. Multiphoton fluorescence excitation: new spectral windows for biological nonlinear microscopy. Proceedings of the National Academy of Sciences of the United States of America. 93: 10763-8. PMID 8855254 DOI: 10.1073/Pnas.93.20.10763  0.624
1996 Xu C, Williams RM, Zipfel W, Webb WW. Multiphoton excitation cross-sections of molecular fluorophores Bioimaging. 4: 198-207. DOI: 10.1002/1361-6374(199609)4:3<198::AID-BIO10>3.0.CO;2-X  0.504
1996 Xu C, Williams RM, Zipfel W, Webb WW. Multiphoton excitation cross-sections of molecular fluorophores Bioimaging. 4: 198-207. DOI: 10.1002/1361-6374(199609)4:3<198::Aid-Bio10>3.0.Co;2-X  0.613
1994 Laible PD, Zipfel W, Owens TG. Excited state dynamics in chlorophyll-based antennae: the role of transfer equilibrium. Biophysical Journal. 66: 844-60. PMID 8011917 DOI: 10.1016/S0006-3495(94)80861-6  0.547
1992 Lee JW, Zipfel W, Owens TG. Quenching of chlorophyll excited states in photosystem I by quinones Journal of Luminescence. 51: 79-89. DOI: 10.1016/0022-2313(92)90020-A  0.57
1990 Zipfel WR, Alscher RG, Zucker L. Effects of sulfite on phosphoenolpyruvate carboxylase and nicotinamide adenine dinucleotide phosphate-dependent malate dehydrogenase in epidermal peels in two cultivars of pea Physiologia Plantarum. 79: 491-496. DOI: 10.1111/J.1399-3054.1990.Tb02108.X  0.546
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