Yuta Tsunematsu - Related publications

2014-2015 University of Shizuoka, Shizuoka-shi, Shizuoka-ken, Japan 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Park YK, Bordes F, Letisse F, Nicaud JM. Engineering precursor pools for increasing production of odd-chain fatty acids in . Metabolic Engineering Communications. 12: e00158. PMID 33391990 DOI: 10.1016/j.mec.2020.e00158   
2021 Zhou W, Posri P, Mahmud T. Natural Occurrence of Hybrid Polyketides from Two Distinct Biosynthetic Pathways in . Acs Chemical Biology. 16: 270-276. PMID 33601889 DOI: 10.1021/acschembio.0c00982   
2021 Liu J, Liu A, Hu Y. Enzymatic dimerization in the biosynthetic pathway of microbial natural products. Natural Product Reports. PMID 33404031 DOI: 10.1039/d0np00063a   
2021 Teshima A, Kondo H, Tanaka Y, Nindita Y, Misaki Y, Konaka Y, Itakura Y, Tonokawa T, Kinashi H, Arakawa K. Substrate specificity of two cytochrome P450 monooxygenases involved in lankamycin biosynthesis. Bioscience, Biotechnology, and Biochemistry. 85: 115-125. PMID 33577670 DOI: 10.1093/bbb/zbaa063   
2021 Sirithanakorn C, Cronan JE. Biotin, a universal and essential cofactor: Synthesis, ligation and regulation. Fems Microbiology Reviews. PMID 33428728 DOI: 10.1093/femsre/fuab003   
2021 Perez JM, Kontur WS, Gehl C, Gille DM, Ma Y, Niles AV, Umana G, Donohue TJ, Noguera DR. Redundancy in aromatic O-demethylation and ring opening reactions in and their impact in the metabolism of plant derived phenolics. Applied and Environmental Microbiology. PMID 33579679 DOI: 10.1128/AEM.02794-20   
2021 Oh S, Libardo MDJ, Azeeza S, Pauly GT, Roma JSO, Sajid A, Tateishi Y, Duncombe C, Goodwin M, Ioerger TR, Wyatt PG, Ray PC, Gray DW, Boshoff HIM, Barry CE. Structure-Activity Relationships of Pyrazolo[1,5-]pyrimidin-7(4)-ones as Antitubercular Agents. Acs Infectious Diseases. PMID 33405882 DOI: 10.1021/acsinfecdis.0c00851   
2021 Panter F, Bader CD, Müller R. The sandarazols are cryptic and structurally unique plasmid encoded toxins from a rare myxobacterium. Angewandte Chemie (International Ed. in English). PMID 33534143 DOI: 10.1002/anie.202014671   
2021 Asemoloye MD, Marchisio MA, Gupta VK, Pecoraro L. Genome-based engineering of ligninolytic enzymes in fungi. Microbial Cell Factories. 20: 20. PMID 33478513 DOI: 10.1186/s12934-021-01510-9   
2021 Chen LQ, Chhajed S, Zhang T, Collins JM, Pang Q, Song W, He Y, Chen S. Protein complex formation in methionine chain-elongation and leucine biosynthesis. Scientific Reports. 11: 3524. PMID 33568694 DOI: 10.1038/s41598-021-82790-4   
2021 , Silano V, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lambré C, Lampi E, Mengelers M, Mortensen A, Rivière G, Steffensen IL, Tlustos C, et al. Safety evaluation of the food enzyme alternansucrase from strain NRRL B-30894. Efsa Journal. European Food Safety Authority. 19: e06367. PMID 33505529 DOI: 10.2903/j.efsa.2021.6367   
2021 Zhu X, Siitonen V, Melançon Iii CE, Metsä-Ketelä M. Biosynthesis of Diverse Type II Polyketide Core Structures in M1152. Acs Synthetic Biology. PMID 33471506 DOI: 10.1021/acssynbio.0c00482   
2021 Messiha HL, Payne KAP, Scrutton NS, Leys D. A Biological Route to Conjugated Alkenes: Microbial Production of Hepta-1,3,5-triene. Acs Synthetic Biology. PMID 33535752 DOI: 10.1021/acssynbio.0c00464   
2021 Messiha HL, Payne KAP, Scrutton NS, Leys D. A Biological Route to Conjugated Alkenes: Microbial Production of Hepta-1,3,5-triene. Acs Synthetic Biology. PMID 33535752 DOI: 10.1021/acssynbio.0c00464   
2021 Abe I, Tao H, Mori T, Wei X, Matsuda Y. One Polyketide Synthase, Two Distinct Products: Trans-Acting Enzyme-Controlled Product Divergence in Calbistrin Biosynthesis. Angewandte Chemie (International Ed. in English). PMID 33480463 DOI: 10.1002/anie.202016525   
2021 Subedi P, Kim KH, Hong YS, Lee JH, Oh TJ. Enzymatic characterization and comparison of two steroid hydroxylases CYP154C3-1 and CYP154C3-2 from species. Journal of Microbiology and Biotechnology. PMID 33397832 DOI: 10.4014/jmb.2010.10020   
2021 Hiraga Y, Shimada N, Nagashima Y, Suda K, Kanamori T, Ishiguro K, Sato Y, Hirakawa H, Sato S, Akashi T, Tanaka Y, Ohta D, Aoki K, Shibata D, Suzuki H, et al. Identification of flavonoid 8-hydroxylase with gossypetin synthase activity from flower specific EST data of Lotus Japonicus. Plant & Cell Physiology. PMID 33416873 DOI: 10.1093/pcp/pcaa171   
2021 Riegert AS, Raushel FM. Functional and Structural Characterization of the UDP-Glucose Dehydrogenase Involved in Capsular Polysaccharide Biosynthesis from . Biochemistry. PMID 33621065 DOI: 10.1021/acs.biochem.0c00953   
2021 Baković J, López Martínez D, Nikolaou S, Yu BYK, Tossounian MA, Tsuchiya Y, Thrasivoulou C, Filonenko V, Gout I. Regulation of the CoA Biosynthetic Complex Assembly in Mammalian Cells. International Journal of Molecular Sciences. 22. PMID 33498827 DOI: 10.3390/ijms22031131   
2021 Baković J, López Martínez D, Nikolaou S, Yu BYK, Tossounian MA, Tsuchiya Y, Thrasivoulou C, Filonenko V, Gout I. Regulation of the CoA Biosynthetic Complex Assembly in Mammalian Cells. International Journal of Molecular Sciences. 22. PMID 33498827 DOI: 10.3390/ijms22031131   
2021 Navale GR, Dharne MS, Shinde SS. Metabolic engineering and synthetic biology for isoprenoid production in Escherichia coli and Saccharomyces cerevisiae. Applied Microbiology and Biotechnology. 105: 457-475. PMID 33394155 DOI: 10.1007/s00253-020-11040-w   
2021 Benkoulouche M, Ben Imeddourene A, Barel LA, Le Heiget G, Pizzut S, Kulyk H, Bellvert F, Bozonnet S, Mulard LA, Remaud-Siméon M, Moulis C, André I. Redirecting substrate regioselectivity using engineered ΔN-GBD-CD2 branching sucrases for the production of pentasaccharide repeating units of S. flexneri 3a, 4a and 4b haptens. Scientific Reports. 11: 2474. PMID 33510212 DOI: 10.1038/s41598-021-81719-1   
2021 Narnoliya LK, Sangwan N, Jadaun JS, Bansal S, Sangwan RS. Defining the role of a caffeic acid 3-O-methyltransferase from Azadirachta indica fruits in the biosynthesis of ferulic acid through heterologous over-expression in Ocimum species and Withania somnifera. Planta. 253: 20. PMID 33398404 DOI: 10.1007/s00425-020-03514-y   
2021 Zhu Y, Hu B, Chen L, Dai Q. iMPTCE-Hnetwork: A Multilabel Classifier for Identifying Metabolic Pathway Types of Chemicals and Enzymes with a Heterogeneous Network. Computational and Mathematical Methods in Medicine. 2021: 6683051. PMID 33488764 DOI: 10.1155/2021/6683051   
2021 Mutanda I, Li J, Xu F, Wang Y. Recent Advances in Metabolic Engineering, Protein Engineering, and Transcriptome-Guided Insights Toward Synthetic Production of Taxol. Frontiers in Bioengineering and Biotechnology. 9: 632269. PMID 33614616 DOI: 10.3389/fbioe.2021.632269   
2021 Rathore DS, Singh SP. Kinetics of growth and co-production of amylase and protease in novel marine actinomycete, Streptomyces lopnurensis KaM5. Folia Microbiologica. PMID 33404954 DOI: 10.1007/s12223-020-00843-z   
2021 Wang X, Pereira JH, Tsutakawa S, Fang X, Adams PD, Mukhopadhyay A, Lee TS. Efficient production of oxidized terpenoids via engineering fusion proteins of terpene synthase and cytochrome P450. Metabolic Engineering. PMID 33482331 DOI: 10.1016/j.ymben.2021.01.004   
2021 Uggowitzer KA, Habibi Y, Wei W, Moitessier N, Thibodeaux CJ. Mutations in Dynamic Structural Elements Alter the Kinetics and Fidelity of the Multifunctional Class II Lanthipeptide Synthetase, HalM2. Biochemistry. PMID 33507068 DOI: 10.1021/acs.biochem.0c00919   
2021 Xuan L, Zhang J, Lu W, Gluza P, Ebert B, Kotake T, Lu M, Zhang Y, Clausen MH, Johnson KL, Doblin MS, Heazlewood JL, Bacic A, Song L, Zeng W. A Pipeline towards the Biochemical Characterization of the GT14 Family. International Journal of Molecular Sciences. 22. PMID 33572987 DOI: 10.3390/ijms22031360   
2021 Tang H, Ju X, Zhao J, Li L. Engineering ribose-5-phosphate isomerase B from a central carbon metabolic enzyme to a promising sugar biocatalyst. Applied Microbiology and Biotechnology. PMID 33394147 DOI: 10.1007/s00253-020-11075-z   
2021 Romero E, Jones BS, Hogg BN, Rué Casamajo A, Hayes MA, Flitsch SL, Turner NJ, Schnepel C. Enzymatic Late-Stage Modifications: Better Late than Never. Angewandte Chemie (International Ed. in English). PMID 33453143 DOI: 10.1002/anie.202014931   
2021 Li ZJ, Wang YZ, Wang LR, Shi TQ, Sun XM, Huang H. Advanced Strategies for the Synthesis of Terpenoids in . Journal of Agricultural and Food Chemistry. PMID 33595318 DOI: 10.1021/acs.jafc.1c00350   
2021 Sukumaran RK, Christopher M, Kooloth-Valappil P, Sreeja-Raju A, Mathew RM, Sankar M, Puthiyamadam A, Adarsh VP, Aswathi A, Rebinro V, Abraham A, Pandey A. Addressing challenges in production of cellulases for biomass hydrolysis: Targeted interventions into the genetics of cellulase producing fungi. Bioresource Technology. 329: 124746. PMID 33610429 DOI: 10.1016/j.biortech.2021.124746   
2021 Souto BM, de Araújo ACB, Hamann PRV, Bastos AR, Cunha IS, Peixoto J, Kruger RH, Noronha EF, Quirino BF. Functional screening of a Caatinga goat (Capra hircus) rumen metagenomic library reveals a novel GH3 β-xylosidase. Plos One. 16: e0245118. PMID 33449963 DOI: 10.1371/journal.pone.0245118   
2021 Sulpizio A, Crawford CEW, Koweek RS, Charkoudian LK. Probing the structure and function of acyl carrier proteins to unlock the strategic redesign of type II polyketide biosynthetic pathways. The Journal of Biological Chemistry. 100328. PMID 33493513 DOI: 10.1016/j.jbc.2021.100328   
2021 Mendes V, Green SR, Evans JC, Hess J, Blaszczyk M, Spry C, Bryant O, Cory-Wright J, Chan DS, Torres PHM, Wang Z, Nahiyaan N, O'Neill S, Damerow S, Post J, et al. Inhibiting Mycobacterium tuberculosis CoaBC by targeting an allosteric site. Nature Communications. 12: 143. PMID 33420031 DOI: 10.1038/s41467-020-20224-x   
2021 Barnawi H, Woodward L, Fava N, Roubakha M, Shaw SD, Kubinec C, Naismith JH, Creuzenet C. Structure-function studies of the C3/C5 epimerases and C4 reductases of the Campylobacter jejuni capsular heptose modification pathways. The Journal of Biological Chemistry. 100352. PMID 33524389 DOI: 10.1016/j.jbc.2021.100352   
2021 Reis RAG, Li H, Johnson M, Sobrado P. New frontiers in flavin-dependent monooxygenases. Archives of Biochemistry and Biophysics. 108765. PMID 33460580 DOI: 10.1016/j.abb.2021.108765   
2021 Zhao L, Le Chapelain C, Brachmann AO, Kaiser M, Groll M, Bode HB. Activation, Structure, Biosynthesis and Bioactivity of Glidobactin-like Proteasome Inhibitors from Photorhabdus laumondii. Chembiochem : a European Journal of Chemical Biology. PMID 33452852 DOI: 10.1002/cbic.202100014   
2021 Stewart NK, Toth M, Stasyuk A, Lee M, Smith CA, Vakulenko SB. Inhibition of the Class D β-Lactamase CDD-1 by Avibactam. Acs Infectious Diseases. PMID 33390002 DOI: 10.1021/acsinfecdis.0c00714   
2021 Tavares MP, Morgan T, Gomes RF, Rodrigues MQRB, Castro-Borges W, de Rezende ST, de Oliveira Mendes TA, Guimarães VM. Secretomic insight into the biomass hydrolysis potential of the phytopathogenic fungus Chrysoporthe cubensis. Journal of Proteomics. 104121. PMID 33540065 DOI: 10.1016/j.jprot.2021.104121   
2021 Chen R, Miao Y, Liu Y, Zhang L, Zhong M, Adams JM, Dong Y, Mahendra S. Identification of novel 1,4-dioxane degraders and related genes from activated sludge by taxonomic and functional gene sequence analysis. Journal of Hazardous Materials. 412: 125157. PMID 33540262 DOI: 10.1016/j.jhazmat.2021.125157   
2021 Iacovelli R, Mózsik L, Bovenberg RAL, Driessen AJM. Identification of a conserved N-terminal domain in the first module of ACV synthetases. Microbiologyopen. e1145. PMID 33449449 DOI: 10.1002/mbo3.1145   
2021 Ni D, Xu W, Chen Z, Zhang W, Mu W. [Characterization of inulosucrase and the enzymatic synthesis of inulin]. Sheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology. 37: 266-275. PMID 33501807 DOI: 10.13345/j.cjb.200228   
2021 Li Y, Yang S, Ma D, Song W, Gao C, Liu L, Chen X. Microbial engineering for the production of C-C organic acids. Natural Product Reports. PMID 33410446 DOI: 10.1039/d0np00062k   
2021 Katsimpouras C, Stephanopoulos G. Enzymes in biotechnology: Critical platform technologies for bioprocess development. Current Opinion in Biotechnology. 69: 91-102. PMID 33422914 DOI: 10.1016/j.copbio.2020.12.003   
2021 Khushi S, Salim AA, Elbanna AH, Nahar L, Capon RJ. New from Old: Thorectandrin Alkaloids in a Southern Australian Marine Sponge, (CMB-01889). Marine Drugs. 19. PMID 33572064 DOI: 10.3390/md19020097   
2021 Caliandro R, Polsinelli I, Demitri N, Musiani F, Martens S, Benini S. The structural and functional characterization of Malus domestica double bond reductase MdDBR provides insights towards the identification of its substrates. International Journal of Biological Macromolecules. 171: 89-99. PMID 33412202 DOI: 10.1016/j.ijbiomac.2020.12.190   
2021 Wu C, van der Donk WA. Engineering of new-to-nature ribosomally synthesized and post-translationally modified peptide natural products. Current Opinion in Biotechnology. 69: 221-231. PMID 33556835 DOI: 10.1016/j.copbio.2020.12.022   
2021 Lin Y, Guan Y, Dong X, Ma Y, Wang X, Leng Y, Wu F, Ye JW, Chen GQ. Engineering Halomonas bluephagenesis as a chassis for bioproduction from starch. Metabolic Engineering. PMID 33577951 DOI: 10.1016/j.ymben.2021.01.014