Hong Li, Ph.D - Publications

Affiliations: 
1996-1999 Biology California Institute of Technology, Pasadena, CA 
 1999- Chemistry, Institute of Molecular Biophysics Florida State University, Tallahassee, FL, United States 
Website:
http://biophysics.fsu.edu/hongli/

205 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Xu Y, Liu J, Zhao T, Song F, Tian L, Cai W, Li H, Duan Y. Identification and Interpretation of A-to-I RNA Editing Events in Insect Transcriptomes. International Journal of Molecular Sciences. 24. PMID 38138955 DOI: 10.3390/ijms242417126  0.384
2023 Zeng Q, Liu CH, Ampuero J, Wu D, Jiang W, Zhou L, Li H, Bai L, Romero-Gómez M, Tang H. Circular RNAs in non-alcoholic fatty liver disease: Functions and clinical significance. Rna Biology. 21: 1-15. PMID 38113132 DOI: 10.1080/15476286.2023.2290769  0.317
2023 Fan W, Wang L, Lei Z, Li H, Chu J, Yan M, Wang Y, Wang H, Yang J, Cho J. mA RNA demethylase AtALKBH9B promotes mobilization of a heat-activated long terminal repeat retrotransposon in . Science Advances. 9: eadf3292. PMID 38019921 DOI: 10.1126/sciadv.adf3292  0.327
2023 Wang L, Li H, Lei Z, Jeong DH, Cho J. The CARBON CATABOLITE REPRESSION 4A-mediated RNA deadenylation pathway acts on the transposon RNAs that are not regulated by small RNAs. The New Phytologist. PMID 38009859 DOI: 10.1111/nph.19435  0.378
2023 Tan J, Sahaer P, Li H, Han W, Sun H. The expression, function, and network regulation of circDNAJB6 in chicken macrophages under lipopolysaccharide (LPS) stimulation. Developmental and Comparative Immunology. 105095. PMID 37951323 DOI: 10.1016/j.dci.2023.105095  0.336
2023 Zhan D, Zheng C, Cai W, Li H, Duan Y. The Many Roles of A-to-I RNA Editing in Animals: Functional or Adaptive? Frontiers in Bioscience (Landmark Edition). 28: 256. PMID 37919076 DOI: 10.31083/j.fbl2810256  0.32
2023 Gan P, Wang Z, Bezprozvannaya S, McAnally JR, Tan W, Li H, Bassel-Duby R, Liu N, Olson EN. RBPMS regulates cardiomyocyte contraction and cardiac function through RNA alternative splicing. Cardiovascular Research. PMID 37890031 DOI: 10.1093/cvr/cvad166  0.317
2023 Wang Y, Pan Z, Mou M, Xia W, Zhang H, Zhang H, Liu J, Zheng L, Luo Y, Zheng H, Yu X, Lian X, Zeng Z, Li Z, Zhang B, ... ... Li H, et al. A task-specific encoding algorithm for RNAs and RNA-associated interactions based on convolutional autoencoder. Nucleic Acids Research. PMID 37889083 DOI: 10.1093/nar/gkad929  0.312
2023 Liao X, Zhao Y, Li H, Hou W, Tang X, Zhou R. A simple and rapid method for isolating high-quality RNA from kenaf with high polysaccharide and polyphenol contents. Biotechniques. PMID 37880956 DOI: 10.2144/btn-2023-0077  0.303
2023 Li H, Gao Q, Gao J, Huang J, Geng X, Wang G, Liang B, Li X, Wang M, Xiao Z, Chu PK, Huang A. Controllability of the Conductive Filament in Porous SiO Memristors by Humidity-Mediated Silver Ion Migration. Acs Applied Materials & Interfaces. PMID 37738541 DOI: 10.1021/acsami.3c07179  0.34
2023 Jiang L, Xie X, Su N, Zhang D, Chen X, Xu X, Zhang B, Huang K, Yu J, Fang M, Bao B, Zuo F, Yang L, Zhang R, Li H, et al. Large Stokes shift fluorescent RNAs for dual-emission fluorescence and bioluminescence imaging in live cells. Nature Methods. PMID 37723244 DOI: 10.1038/s41592-023-01997-7  0.341
2023 Zhao Y, Rai J, Li H. Regulation of translation by ribosomal RNA pseudouridylation. Science Advances. 9: eadg8190. PMID 37595043 DOI: 10.1126/sciadv.adg8190  0.348
2023 Duan Y, Xu Y, Song F, Tian L, Cai W, Li H. Differential adaptive RNA editing signals between insects and plants revealed by a new measurement termed haplotype diversity. Biology Direct. 18: 47. PMID 37592344 DOI: 10.1186/s13062-023-00404-7  0.309
2023 Li H, Wang W, Liu R, Tong B, Dai X, Lu Y, Yu Y, Dai S, Ruan L. Long non-coding RNA-mediated competing endogenous RNA regulatory network during flower development and color formation in . Frontiers in Plant Science. 14: 1215044. PMID 37575929 DOI: 10.3389/fpls.2023.1215044  0.31
2023 Zhang S, Wen X, Zhou L, Li H, Li W, Hoffman AR, Hu JF, Cui J. Chromatin-RNA in situ Reverse Transcription Sequencing (CRIST-seq) Approach to Profile the Non-coding RNA Interaction Network. Bio-Protocol. 13: e4718. PMID 37497457 DOI: 10.21769/BioProtoc.4718  0.302
2023 Duan Y, Ma L, Song F, Tian L, Cai W, Li H. Auto-recoding A-to-I RNA editing sites in Adar gene underwent compensatory gains and losses in major insect clades. Rna (New York, N.Y.). PMID 37451866 DOI: 10.1261/rna.079682.123  0.339
2023 Yuan Z, Georgescu R, Li H, O'Donnell ME. Molecular choreography of primer synthesis by the eukaryotic Pol α-primase. Nature Communications. 14: 3697. PMID 37344454 DOI: 10.1038/s41467-023-39441-1  0.311
2023 Duan Y, Li H, Cai W. Adaptation of A-to-I RNA editing in bacteria, fungi, and animals. Frontiers in Microbiology. 14: 1204080. PMID 37293227 DOI: 10.3389/fmicb.2023.1204080  0.324
2023 Yuan Z, Georgescu R, Li H, O'Donnell ME. Molecular choreography of primer synthesis by the eukaryotic Pol α-primase. Biorxiv : the Preprint Server For Biology. PMID 37205351 DOI: 10.1101/2023.05.03.539257  0.358
2023 Xiao J, Wang X, Zheng Z, Wu Y, Wang Z, Li H, Li P. Molecular characterization of a novel deltaflexivirus infecting the edible fungus Pleurotus ostreatus. Archives of Virology. 168: 162. PMID 37195309 DOI: 10.1007/s00705-023-05789-4  0.374
2023 Wang Y, Chen Z, Pan Z, Huang S, Liu J, Xia W, Zhang H, Zheng M, Li H, Hou T, Zhu F. RNAincoder: a deep learning-based encoder for RNA and RNA-associated interaction. Nucleic Acids Research. PMID 37166951 DOI: 10.1093/nar/gkad404  0.339
2023 Peng R, Zhang G, Li H. COL1A1-PDGFB Fusion Gene Detection Through Bulk RNA-Seq and Transcriptomic Features of Dermatofibrosarcoma Protuberans. Dermatologic Surgery : Official Publication For American Society For Dermatologic Surgery [Et Al.]. 49: S27-S33. PMID 37115997 DOI: 10.1097/DSS.0000000000003771  0.303
2023 Meng W, Han Y, Li B, Li H. The diverse role of RNA methylation in esophageal cancer. Acta Biochimica Et Biophysica Sinica. PMID 37070847 DOI: 10.3724/abbs.2023057  0.308
2023 Zhu Z, Guo Y, Wang C, Yang Z, Li R, Zeng Z, Li H, Zhang D, Yang L. An ultra-sensitive one-pot RNA-templated DNA ligation rolling circle amplification-assisted CRISPR/Cas12a detector assay for rapid detection of SARS-CoV-2. Biosensors & Bioelectronics. 228: 115179. PMID 36878066 DOI: 10.1016/j.bios.2023.115179  0.311
2023 Zhang B, Li H, Kong L, Yang N, Yang S, Qi L, Liu T, Wang X, Qin W. Tandem enrichment of serum exosomes and exosomal RNA with titanium dioxide. Journal of Chromatography. A. 1693: 463882. PMID 36857982 DOI: 10.1016/j.chroma.2023.463882  0.328
2023 Elfman J, Goins L, Heller T, Singh S, Wang YH, Li H. Discovery of A Polymorphic Gene Fusion via Bottom-Up Chimeric RNA Prediction. Biorxiv : the Preprint Server For Biology. PMID 36778239 DOI: 10.1101/2023.02.02.526864  0.301
2023 Wang S, Li H, Dong K, Shu W, Zhang J, Zhang J, Zhao R, Wei S, Feng D, Xiao X, Zhang W. A universal and specific RNA biosensor via DNA circuit-mediated PAM-independent CRISPR/Cas12a and PolyA-rolling circle amplification. Biosensors & Bioelectronics. 226: 115139. PMID 36774734 DOI: 10.1016/j.bios.2023.115139  0.315
2023 Li H, Zhang Y, Bing J, Han J, Hu J, Zhao H, Sun X. Intron-capture RNA-seq reveals the landscape of intronic RNAs in Arabidopsis. Plant Physiology and Biochemistry : Ppb. 196: 75-88. PMID 36701993 DOI: 10.1016/j.plaphy.2023.01.040  0.384
2023 Duan Y, Cai W, Li H. Chloroplast C-to-U RNA editing in vascular plants is adaptive due to its restorative effect: testing the restorative hypothesis. Rna (New York, N.Y.). 29: 141-152. PMID 36649983 DOI: 10.1261/rna.079450.122  0.305
2023 Sun P, Chen M, Sooranna SR, Shi D, Liu Q, Li H. The emerging roles of circRNAs in traits associated with livestock breeding. Wiley Interdisciplinary Reviews. Rna. e1775. PMID 36631071 DOI: 10.1002/wrna.1775  0.368
2023 Esposito CL, Autiero I, Sandomenico A, Li H, Bassal MA, Ibba ML, Wang D, Rinaldi L, Ummarino S, Gaggi G, Borchiellini M, Swiderski P, Ruvo M, Catuogno S, Ebralidze AK, et al. Targeted systematic evolution of an RNA platform neutralizing DNMT1 function and controlling DNA methylation. Nature Communications. 14: 99. PMID 36609400 DOI: 10.1038/s41467-022-35222-4  0.308
2022 Wu F, Zhu Y, Zhou C, Gui W, Li H, Lin X. Regulation mechanism and pathogenic role of lncRNA plasmacytoma variant translocation 1 () in human diseases. Genes & Diseases. 10: 901-914. PMID 37396533 DOI: 10.1016/j.gendis.2022.05.037  0.32
2022 Li H, Humphreys BD. Mouse kidney nuclear isolation and library preparation for single-cell combinatorial indexing RNA sequencing. Star Protocols. 3: 101904. PMID 36595916 DOI: 10.1016/j.xpro.2022.101904  0.325
2022 Li H, Guo Y, Qi W, Liao M. N-methyladenosine modification of viral RNA and its role during the recognition process of RIG-I-like receptors. Frontiers in Immunology. 13: 1031200. PMID 36582239 DOI: 10.3389/fimmu.2022.1031200  0.347
2022 Sarni SH, Roca J, Du C, Jia M, Li H, Damjanovic A, Małecka EM, Wysocki VH, Woodson SA. Intrinsically disordered interaction network in an RNA chaperone revealed by native mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 119: e2208780119. PMID 36375072 DOI: 10.1073/pnas.2208780119  0.373
2022 Reddy D, Bhattacharya S, Levy M, Zhang Y, Gogol M, Li H, Florens L, Workman JL. Paraspeckles interact with SWI/SNF subunit ARID1B to regulate transcription and splicing. Embo Reports. e55345. PMID 36354291 DOI: 10.15252/embr.202255345  0.306
2022 Sun Z, Wu Y, Gao F, Li H, Wang C, Du L, Dong L, Jiang Y. In situ detection of exosomal RNAs for cancer diagnosis. Acta Biomaterialia. PMID 36343908 DOI: 10.1016/j.actbio.2022.10.061  0.351
2022 Zhang C, Wang D, Hao Y, Wu S, Luo J, Xue Y, Wang D, Li G, Liu L, Shao C, Li H, Yuan J, Zhu M, Fu XD, Yang X, et al. LncRNA CCTT-mediated RNA-DNA and RNA-protein interactions facilitate the recruitment of CENP-C to centromeric DNA during kinetochore assembly. Molecular Cell. 82: 4018-4032.e9. PMID 36332605 DOI: 10.1016/j.molcel.2022.09.022  0.352
2022 Li H, Huang E, Zhang Y, Huang SY, Xiao Y. HDOCK update for modeling protein-RNA/DNA complex structures. Protein Science : a Publication of the Protein Society. 31: e4441. PMID 36305764 DOI: 10.1002/pro.4441  0.355
2022 Bao X, Zhang Y, Li H, Teng Y, Ma L, Chen Z, Luo X, Zheng J, Zhao A, Ren J, Zuo Z. RM2Target: a comprehensive database for targets of writers, erasers and readers of RNA modifications. Nucleic Acids Research. PMID 36300630 DOI: 10.1093/nar/gkac945  0.381
2022 Wang Y, Li H, Huang ZQ, Ma B, Yang YZ, Xiu ZH, Wang L, Tan BC. Maize PPR-E proteins mediate RNA C-to-U editing in mitochondria by recruiting the trans deaminase PCW1. The Plant Cell. PMID 36200865 DOI: 10.1093/plcell/koac298  0.327
2022 Goswami HN, Rai J, Das A, Li H. Molecular mechanism of active Cas7-11 in processing CRISPR RNA and interfering target RNA. Elife. 11. PMID 36190192 DOI: 10.7554/eLife.81678  0.428
2022 Guan Y, Gu Y, Li H, Liang B, Han C, Zhang Y, Liu Q, Wei W, Ma Y. NLRP3 inflammasome activation mechanism and its role in autoimmune liver disease. Acta Biochimica Et Biophysica Sinica. PMID 36148948 DOI: 10.3724/abbs.2022137  0.353
2022 Li H, Wang J, Tu J. A-to-I nonsynonymous RNA editing was significantly enriched in the ubiquitination site and correlated with clinical features and immune response. Scientific Reports. 12: 15079. PMID 36064557 DOI: 10.1038/s41598-022-18926-x  0.319
2022 Cui R, Li H, Zhao J, Li X, Gan J, Ma J. Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Research. PMID 36039765 DOI: 10.1093/nar/gkac727  0.42
2022 Li H, Zheng X, Gao J, Leung KS, Wong MH, Yang S, Liu Y, Dong M, Bai H, Ye X, Cheng L. Whole transcriptome analysis reveals non-coding RNA's competing endogenous gene pairs as novel form of motifs in serous ovarian cancer. Computers in Biology and Medicine. 148: 105881. PMID 35940161 DOI: 10.1016/j.compbiomed.2022.105881  0.306
2022 Chen HM, Li H, Lin MX, Fan WJ, Zhang Y, Lin YT, Wu SX. Research Progress for RNA Modifications in Physiological and Pathological Angiogenesis. Frontiers in Genetics. 13: 952667. PMID 35937999 DOI: 10.3389/fgene.2022.952667  0.344
2022 Tang X, Sun R, Ge W, Mao T, Qian L, Huang C, Kang Z, Xiao Q, Luo M, Zhang Q, Li S, Chen H, Liu W, Wang B, Li S, ... ... Li H, et al. Enhanced inflammation and suppressed adaptive immunity in COVID-19 with prolonged RNA shedding. Cell Discovery. 8: 70. PMID 35879274 DOI: 10.1038/s41421-022-00441-y  0.322
2022 Xiao Q, Xu Z, Xue Y, Xu C, Han L, Liu Y, Wang F, Zhang R, Han S, Wang X, Li GL, Li H, Yang H, Shu Y. Rescue of autosomal dominant hearing loss by in vivo delivery of mini dCas13X-derived RNA base editor. Science Translational Medicine. 14: eabn0449. PMID 35857824 DOI: 10.1126/scitranslmed.abn0449  0.361
2022 Yu G, Mu H, Fang F, Zhou H, Li H, Wu Q, Xiong Q, Cui Y. LRP1B mutation associates with increased tumor mutation burden and inferior prognosis in liver hepatocellular carcinoma. Medicine. 101: e29763. PMID 35777027 DOI: 10.1097/MD.0000000000029763  0.388
2022 Li H, Guo J, Ye Z, Zhao Z, Chen J, Yang J. Molecular characterization of a novel virga-like virus associated with wheat. Archives of Virology. PMID 35752685 DOI: 10.1007/s00705-022-05473-z  0.358
2022 Li H, Guan Y, Liang B, Ding P, Hou X, Wei W, Ma Y. Therapeutic potential of MCC950, a specific inhibitor of NLRP3 inflammasome. European Journal of Pharmacology. 928: 175091. PMID 35714692 DOI: 10.1016/j.ejphar.2022.175091  0.355
2022 Zhao Y, Rai J, Xu C, He H, Li H. Artificial intelligence-assisted cryoEM structure of Bfr2-Lcp5 complex observed in the yeast small subunit processome. Communications Biology. 5: 523. PMID 35650250 DOI: 10.1038/s42003-022-03500-y  0.321
2022 Sun Y, Li H. Chimeric RNAs Discovered by RNA Sequencing and Their Roles in Cancer and Rare Genetic Diseases. Genes. 13. PMID 35627126 DOI: 10.3390/genes13050741  0.364
2022 Zhao J, Xie W, Yang Z, Zhao M, Ke T, Xu C, Li H, Chen Q, Wang QK. Identification and characterization of a special type of subnuclear structure: AGGF1-coated paraspeckles. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 36: e22366. PMID 35608889 DOI: 10.1096/fj.202101690RR  0.341
2022 Zhao Y, Rai J, Yu H, Li H. CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations. Structure (London, England : 1993). PMID 35489333 DOI: 10.1016/j.str.2022.04.002  0.353
2022 Liu Y, Cheng L, Zhan H, Li H, Li X, Huang Y, Li Y. The Roles of Noncoding RNAs in Systemic Sclerosis. Frontiers in Immunology. 13: 856036. PMID 35464474 DOI: 10.3389/fimmu.2022.856036  0.334
2022 Luo H, Tang W, Liu H, Zeng X, Ngai WSC, Gao R, Li H, Li R, Zheng H, Guo J, Qin F, Wang G, Li K, Fan X, Zou P, et al. Photocatalytic Chemical Crosslinking for Profiling RNA-Protein Interactions in Living Cells. Angewandte Chemie (International Ed. in English). PMID 35451177 DOI: 10.1002/anie.202202008  0.345
2022 Qiu Y, Li H, Zhang Q, Qiao X, Wu J. Ferroptosis-Related Long Noncoding RNAs as Prognostic Marker for Colon Adenocarcinoma. Applied Bionics and Biomechanics. 2022: 5220368. PMID 35432591 DOI: 10.1155/2022/5220368  0.31
2022 Zhang J, Wang H, Chen H, Li H, Xu P, Liu B, Zhang Q, Lv C, Song X. ATF3 -activated accelerating effect of LINC00941/lncIAPF on fibroblast-to-myofibroblast differentiation by blocking autophagy depending on ELAVL1/HuR in pulmonary fibrosis. Autophagy. 1-20. PMID 35427207 DOI: 10.1080/15548627.2022.2046448  0.304
2022 Peng X, Luo Y, Li H, Guo X, Chen H, Ji X, Liang H. RNA editing increases the nucleotide diversity of SARS-CoV-2 in human host cells. Plos Genetics. 18: e1010130. PMID 35353808 DOI: 10.1371/journal.pgen.1010130  0.383
2022 Sridhara S, Rai J, Whyms C, Goswami H, He H, Woodside W, Terns MP, Li H. Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex. Communications Biology. 5: 279. PMID 35351985 DOI: 10.1038/s42003-022-03187-1  0.843
2022 Liu X, Guo Z, Han J, Peng B, Zhang B, Li H, Hu X, David CJ, Chen M. The PAF1 complex promotes 3' processing of pervasive transcripts. Cell Reports. 38: 110519. PMID 35294889 DOI: 10.1016/j.celrep.2022.110519  0.308
2022 Chen FQ, Zheng H, Gu T, Hu YH, Yang L, Huang ZP, Qiao GL, Li HJ. Modification of STIM2 by mA RNA methylation inhibits metastasis of cholangiocarcinoma. Annals of Translational Medicine. 10: 40. PMID 35282134 DOI: 10.21037/atm-21-6485  0.339
2022 Zong J, Zhang Y, Guo F, Wang C, Li H, Lin G, Jiang W, Song X, Zhang X, Huang F, Qi M, Zheng X. Poor evidence for host-dependent regular RNA editing in the transcriptome of SARS-CoV-2. Journal of Applied Genetics. PMID 35179717 DOI: 10.1007/s13353-022-00687-y  0.33
2022 Ma Y, Li H, Gong Z, Yang S, Wang P, Tang C. Nucleobase Clustering Contributes to the Formation and Hollowing of Repeat-Expansion RNA Condensate. Journal of the American Chemical Society. PMID 35179357 DOI: 10.1021/jacs.1c12085  0.372
2022 Meng JX, Wei J, Chi RF, Qiao YH, Zhou J, Wang YL, Wang H, Li HH. MrMYB44-Like Negatively Regulates Anthocyanin Biosynthesis and Causes Spring Leaf Color of 'Radiant' to Fade From Red to Green. Frontiers in Plant Science. 13: 822340. PMID 35178062 DOI: 10.3389/fpls.2022.822340  0.356
2022 Wu YL, Li HF, Chen HH, Lin H. Emergent Roles of Circular RNAs in Metabolism and Metabolic Disorders. International Journal of Molecular Sciences. 23. PMID 35162956 DOI: 10.3390/ijms23031032  0.345
2022 He W, Lin G, Pan C, Li W, Shen J, Liu Y, Li H, Wu D, Lin X. The Identification of Two RNA Modification Patterns and Tumor Microenvironment Infiltration Characterization of Lung Adenocarcinoma. Frontiers in Genetics. 13: 761681. PMID 35154267 DOI: 10.3389/fgene.2022.761681  0.33
2022 Liu R, Ou L, Sheng B, Hao P, Li P, Yang X, Xue G, Zhu L, Luo Y, Zhang P, Yang P, Li H, Feng D. Mixed-weight Neural Bagging for Detecting m6A Modifications in SARS-CoV-2 RNA Sequencing. Ieee Transactions On Bio-Medical Engineering. PMID 35148261 DOI: 10.1109/TBME.2022.3150420  0.381
2022 Das A, Goswami HN, Whyms CT, Sridhara S, Li H. Structural principles of CRISPR-Cas enzymes used in nucleic acid detection. Journal of Structural Biology. 214: 107838. PMID 35123001 DOI: 10.1016/j.jsb.2022.107838  0.816
2022 Chen Y, Zhao S, Ding R, Li H, Yang CX, Du ZQ. Identification of a Long Noncoding RNA (lncPRDM16) Inhibiting Preadipocyte Proliferation in the Chicken. Journal of Agricultural and Food Chemistry. PMID 35048701 DOI: 10.1021/acs.jafc.1c05554  0.318
2021 Liu X, Wen YZ, Huang ZL, Shen X, Wang JH, Luo YH, Chen WX, Lun ZR, Li HB, Qu LH, Shan H, Zheng LL. SARS-CoV-2 causes a significant stress response mediated by small RNAs in the blood of COVID-19 patients. Molecular Therapy. Nucleic Acids. 27: 751-762. PMID 35003892 DOI: 10.1016/j.omtn.2021.12.034  0.305
2021 Li H, Dong H, Xu B, Xiong QP, Li CT, Yang WQ, Li J, Huang ZX, Zeng QY, Wang ED, Liu RJ. A dual role of human tRNA methyltransferase hTrmt13 in regulating translation and transcription. The Embo Journal. e108544. PMID 34850409 DOI: 10.15252/embj.2021108544  0.332
2021 Niu Y, Yang T, Gu X, Chen R, Meng X, Xu J, Yang L, Zhao J, Zhang X, Bai C, Kang J, Ran P, Shen H, Wen F, Huang K, ... ... Li H, et al. Long-term Ozone Exposure and Small Airways Dysfunction: The China Pulmonary Health (CPH) Study. American Journal of Respiratory and Critical Care Medicine. PMID 34813411 DOI: 10.1164/rccm.202107-1599OC  0.46
2021 Cheng J, Zhou S, Yang K, Yu H, Chen R, Zeng L, Li H, Wang Y, Song J. Identification of RNA helicases in and their expression patterns under abiotic stress. Physiology and Molecular Biology of Plants : An International Journal of Functional Plant Biology. 27: 2283-2296. PMID 34744366 DOI: 10.1007/s12298-021-01087-y  0.337
2021 Chen B, Shi H, Zhang J, Zhou C, Han M, Jiang W, Lai Y, Tu X, Li H. CRISPR-based RNA-binding protein mapping in live cells. Biochemical and Biophysical Research Communications. 583: 79-85. PMID 34735883 DOI: 10.1016/j.bbrc.2021.10.059  0.386
2021 Huang K, Chen X, Li C, Song Q, Li H, Zhu L, Yang Y, Ren A. Structure-based investigation of fluorogenic Pepper aptamer. Nature Chemical Biology. PMID 34725509 DOI: 10.1038/s41589-021-00884-6  0.337
2021 Liu M, Li H, Luo X, Cai J, Chen T, Xie Y, Ren J, Zuo Z. RPS: a comprehensive database of RNAs involved in liquid-liquid phase separation. Nucleic Acids Research. PMID 34718734 DOI: 10.1093/nar/gkab986  0.372
2021 Li H, Ramia NE, Borges F, Revol-Junelles AM, Vogensen FK, Leisner JJ. Identification of Potential Citrate Metabolism Pathways in . Microorganisms. 9. PMID 34683489 DOI: 10.3390/microorganisms9102169  0.702
2021 Zhou X, Pan Y, Yu L, Wu J, Li Z, Li H, Guan Z, Tang X, Yang Z. Feasibility of cRGD conjugation at 5'-antisense strand of siRNA by phosphodiester linkage extension. Molecular Therapy. Nucleic Acids. 25: 603-612. PMID 34589281 DOI: 10.1016/j.omtn.2021.08.004  0.303
2021 Sridhara S, Goswami HN, Whyms C, Dennis JH, Li H. Virus detection via programmable Type III-A CRISPR-Cas systems. Nature Communications. 12: 5653. PMID 34580296 DOI: 10.1038/s41467-021-25977-7  0.789
2021 Mu H, Yu G, Li H, Wang M, Cui Y, Zhang T, Song T, Liu C. Mild chronic hypoxia-induced HIF-2α interacts with c-MYC through competition with HIF-1α to induce hepatocellular carcinoma cell proliferation. Cellular Oncology (Dordrecht). PMID 34339013 DOI: 10.1007/s13402-021-00625-w  0.385
2021 Hao J, Peng Q, Wang K, Yu G, Pan Y, Du X, Hu N, Zhang X, Qin Y, Li H. Antitumor Effect of Lenvatinib Combined with Alisertib in Hepatocellular Carcinoma by Targeting the DNA Damage Pathway. Biomed Research International. 2021: 6613439. PMID 34337035 DOI: 10.1155/2021/6613439  0.438
2021 Yu G, Mu H, Zhou H, Fang F, Cui Y, Wu Q, Xiong Q, Li H. MicroRNA-361 suppresses the biological processes of hepatic stellate cells in HBV-relative hepatic fibrosis by NF-kappaB p65. Cells & Development. 203711. PMID 34216805 DOI: 10.1016/j.cdev.2021.203711  0.382
2021 Blanco Carcache PJ, Guo S, Li H, Zhang K, Xu C, Chiu W, Guo P. Regulation of Reversible Conformational Change, Size Switching, and Immunomodulation of RNA Nanocubes. Rna (New York, N.Y.). PMID 34193550 DOI: 10.1261/rna.078718.121  0.341
2021 Singh S, Li H. Comparative study of bioinformatic tools for the identification of chimeric RNAs from RNA Sequencing. Rna Biology. 1-13. PMID 34142643 DOI: 10.1080/15476286.2021.1940047  0.329
2021 Guo ZL, Liu YY, Gao Y, Guan XM, Li H, Cheng M. Circ-RNA Expression Pattern and circ-RNA-miRNA-mRNA Network in The Pathogenesis of Human Intervertebral Disc Degeneration. Cell Journal. 23: 218-224. PMID 34096223 DOI: 10.22074/cellj.2021.6832  0.311
2021 Guo L, Li H, Zhao R, Tang Y, Li B. Sensitive, general and portable detection of RNAs combining duplex-specific nuclease transduction with an off-shelf signalling platform. Chemical Communications (Cambridge, England). 57: 5714-5717. PMID 33982719 DOI: 10.1039/d1cc01715b  0.345
2021 Chao Y, Li HB, Zhou J. Multiple Functions of RNA Methylation in T Cells: A Review. Frontiers in Immunology. 12: 627455. PMID 33912158 DOI: 10.3389/fimmu.2021.627455  0.41
2021 Wang W, Xu Q, Li B, Li H, Shen S, Wu J, Ge H, Zhang H, Chen S, Chen W, Gao J, Tang H, Liang B, Zheng X, Sun L. Proteomic analysis of psoriatic skin lesions in a Chinese population. Journal of Proteomics. 104207. PMID 33798793 DOI: 10.1016/j.jprot.2021.104207  0.362
2020 Van Nostrand EL, Freese P, Pratt GA, Wang X, Wei X, Xiao R, Blue SM, Chen JY, Cody NAL, Dominguez D, Olson S, Sundararaman B, Zhan L, Bazile C, Bouvrette LPB, ... ... Li H, et al. A large-scale binding and functional map of human RNA-binding proteins. Nature. 583: 711-719. PMID 32728246 DOI: 10.1038/S41586-020-2077-3  0.355
2020 Liang B, Yuan T, Zhou Y, Ding Y, Tang L, Wang F, Wang P, Li H, Zhang Y, Zhu M, Ji Y, Hong X, Zhang X, Zhu Q. Annular epidermolytic ichthyosis with palmoplantar keratosis: a unique phenotype associated with interfamilial phenotypic heterogeneity. European Journal of Dermatology : Ejd. 30: 294-299. PMID 32666929 DOI: 10.1684/ejd.2020.3764  0.322
2020 Lv Q, Sun W, Wang J, Wu C, Li H, Shen X, Liang B, Dong N, Li Y, Zhang L, Xie M. Evaluation of Biventricular Functions in Transplanted Hearts Using 3-Dimensional Speckle-Tracking Echocardiography. Journal of the American Heart Association. e015742. PMID 32370590 DOI: 10.1161/JAHA.119.015742  0.318
2020 Liu H, Yu W, Wu J, Li Z, Li H, Zhou J, Hu J, Lu Y. Identification and characterization of circular RNAs during wood formation of poplars in acclimation to low nitrogen availability. Planta. 251: 47. PMID 31925576 DOI: 10.1007/s00425-020-03338-w  0.342
2019 Yu G, Zhao Y, Tian S, Rai J, He H, Spear J, Sousa D, Fan J, Yu HG, Stagg SM, Li H. Yeast R2TP Interacts with Extended Termini of Client Protein Nop58p. Scientific Reports. 9: 20228. PMID 31882871 DOI: 10.1038/S41598-019-56712-4  0.705
2019 Xia CL, Lyu Y, Li C, Li H, Zhang ZT, Yin SW, Mao Y, Li W, Kong LY, Liang B, Jiang HK, Li-Ling J, Liu CX, Wei J. Rare Variant on the Paternal Allele in a Patient With Silver-Russell Syndrome. Frontiers in Genetics. 10: 1161. PMID 31803239 DOI: 10.3389/fgene.2019.01161  0.402
2019 Lv Y, Gu J, Qiu H, Li H, Zhang Z, Yin S, Mao Y, Kong L, Liang B, Jiang H, Liu C. Whole-exome sequencing identifies a donor splice-site variant in SMPX that causes rare X-linked congenital deafness. Molecular Genetics & Genomic Medicine. e967. PMID 31478598 DOI: 10.1002/mgg3.967  0.348
2019 Zhang C, Liang B, Qiao L, Xuan L, Li H, He Q, Wu X, Lu J, Yu B, Wang T. Effect quantification and value prediction of factors in noninvasive detection for specific fetal copy number variants by semiconductor sequencing. Molecular Genetics & Genomic Medicine. e718. PMID 31115175 DOI: 10.1002/mgg3.718  0.331
2019 Fu K, Tian S, Tan H, Wang C, Wang H, Wang M, Wang Y, Chen Z, Wang Y, Yue Q, Xu Q, Zhang S, Li H, Xie J, Lin M, et al. Biological and RNA regulatory function of MOV10 in mammalian germ cells. Bmc Biology. 17: 39. PMID 31088452 DOI: 10.1186/s12915-019-0659-z  0.4
2018 Liang B, Li H, He Q, Li H, Kong L, Xuan L, Xia Y, Shen J, Mao Y, Li Y, Wang T, Zhao YL. Enrichment of the fetal fraction in non-invasive prenatal screening reduces maternal background interference. Scientific Reports. 8: 17675. PMID 30518878 DOI: 10.1038/s41598-018-35738-0  0.346
2018 Hand TH, Das A, Roth MO, Smith CL, Jean-Baptiste UL, Li H. Phosphate Lock Residues of Acidothermus cellulolyticus Cas9 Are Critical to Its Substrate Specificity. Acs Synthetic Biology. PMID 30458109 DOI: 10.1021/Acssynbio.8B00455  0.324
2018 Jiang YK, Wu JQ, Zhao HZ, Wang X, Wang RY, Zhou LH, Yip CW, Huang LP, Cheng JH, Chen YH, Li H, Zhu LP, Weng XH. Genetic influence of Toll-like receptors on non-HIV cryptococcal meningitis: An observational cohort study. Ebiomedicine. PMID 30366814 DOI: 10.1016/j.ebiom.2018.10.045  0.457
2018 Dai Y, Wynn J, Peralta A, Sherpa C, Jayaraman B, Li H, Verma A, Frankel AD, Le Grice SFJ, Santos WL. Discovery of a Branched Peptide that Recognizes the Rev Response Element (RRE) RNA and Blocks HIV-1 Replication. Journal of Medicinal Chemistry. PMID 30289719 DOI: 10.1021/Acs.Jmedchem.8B01076  0.598
2018 Yu G, Zhao Y, Li H. The Multi-structural Forms of Box C/D Ribonucleoprotein Particles. Rna (New York, N.Y.). PMID 30254138 DOI: 10.1261/Rna.068312.118  0.599
2018 Lin X, Li H, Liu L, Kong L, Mao Y, Li W, Xia Y, Liang B, Zhang Y. Next generation sequencing as a new detection strategy for maternal cell contamination in clinical prenatal samples. Ginekologia Polska. 89: 326-334. PMID 30010182 DOI: 10.5603/GP.a2018.0056  0.33
2018 Yao Q, Li H, Xian L, Xu F, Xia J, Fan J, Du J, Wang J, Peng X. Differentiating RNA from DNA by a molecular fluorescent probe based on the "door-bolt" mechanism biomaterials. Biomaterials. 177: 78-87. PMID 29885588 DOI: 10.1016/j.biomaterials.2018.05.050  0.323
2018 Guo S, Piao X, Li H, Guo P. Methods for Construction and Characterization of Simple or Special Multifunctional RNA Nanoparticles Based on the 3WJ of Phi29 DNA Packaging Motor. Methods (San Diego, Calif.). PMID 29530505 DOI: 10.1016/J.Ymeth.2018.02.025  0.315
2018 Li S, Liu X, Li H, Pan H, Acharya A, Deng Y, Yu Y, Haak R, Schmidt J, Schmalz G, Ziebolz D. Integrated analysis of long noncoding RNA-associated competing endogenous RNA network in periodontitis. Journal of Periodontal Research. PMID 29516510 DOI: 10.1111/jre.12539  0.347
2018 Ding D, Chen K, Chen Y, Li H, Xie K. Engineering introns to express RNA guides for Cas9- and Cpf1-mediated multiplex genome editing. Molecular Plant. PMID 29462720 DOI: 10.1016/j.molp.2018.02.005  0.314
2018 Shu Y, Yin H, Rajabi M, Li H, Vieweger M, Guo S, Shu D, Guo P. RNA-based micelles: A novel platform for chemotherapeutic drug loading and delivery. Journal of Controlled Release : Official Journal of the Controlled Release Society. PMID 29454064 DOI: 10.1016/J.Jconrel.2018.02.014  0.335
2018 Qu S, Liu Z, Yang X, Zhou J, Yu H, Zhang R, Li H. The emerging functions and roles of circular RNAs in cancer. Cancer Letters. 414: 301-309. PMID 29174799 DOI: 10.1016/j.canlet.2017.11.022  0.324
2017 Wang HM, Li HY, Wang XT, Wang YY, Li L, Liang B, Wang J, Song J. Radiofrequency ablation for selective reduction in complex monochorionic multiple pregnancies: A case series. Taiwanese Journal of Obstetrics & Gynecology. 56: 740-744. PMID 29241912 DOI: 10.1016/j.tjog.2017.10.006  0.329
2017 Du J, Xu Z, Liu Q, Yang Y, Qian H, Hu M, Fan Y, Li Q, Yao W, Li H, Qian G, He B, Zhou D, Mao C, Wang G. ATG101 single-stranded antisense RNA-loaded Triangular DNA Nanoparticles Control Human Pulmonary Endothelial Growth via Regulation of Cell Macroautophagy. Acs Applied Materials & Interfaces. PMID 29154530 DOI: 10.1021/Acsami.7B13504  0.309
2017 Fang S, Zhang L, Guo J, Niu Y, Wu Y, Li H, Zhao L, Li X, Teng X, Sun X, Sun L, Zhang MQ, Chen R, Zhao Y. NONCODEV5: a comprehensive annotation database for long non-coding RNAs. Nucleic Acids Research. PMID 29140524 DOI: 10.1093/Nar/Gkx1107  0.315
2017 Li Z, Qin F, Li H. Chimeric RNAs and their implications in cancer. Current Opinion in Genetics & Development. 48: 36-43. PMID 29100211 DOI: 10.1016/j.gde.2017.10.002  0.311
2017 Yang Y, Zhou R, Zhu S, Li X, Li H, Yu H, Li K. Systematic Identification and Molecular Characteristics of Long Noncoding RNAs in Pig Tissues. Biomed Research International. 2017: 6152582. PMID 29062838 DOI: 10.1155/2017/6152582  0.341
2017 Skamagki M, Zhang C, Ross CA, Ananthanarayanan A, Liu Z, Mu Q, Basu U, Wang J, Zhao R, Li H, Kim K. RNA Exosome Complex-Mediated Control of Redox Status in Pluripotent Stem Cells. Stem Cell Reports. 9: 1053-1061. PMID 29020613 DOI: 10.1016/J.Stemcr.2017.08.024  0.349
2017 Lu P, Li H, Li N, Singh RN, Bishop CE, Chen X, Lu B. MEX3C interacts with adaptor-related protein complex 2 and involves in miR-451a exosomal sorting. Plos One. 12: e0185992. PMID 28982131 DOI: 10.1371/Journal.Pone.0185992  0.308
2017 Li X, Zhou B, Chen L, Gou LT, Li H, Fu XD. GRID-seq reveals the global RNA-chromatin interactome. Nature Biotechnology. PMID 28922346 DOI: 10.1038/Nbt.3968  0.341
2017 Tian S, Yu G, He H, Zhao Y, Liu P, Marshall AG, Demeler B, Stagg SM, Li H. Pih1p-Tah1p Puts a Lid on Hexameric AAA+ ATPases Rvb1/2p. Structure (London, England : 1993). PMID 28919439 DOI: 10.1016/J.Str.2017.08.002  0.685
2017 Wu XS, Wang F, Li HF, Hu YP, Jiang L, Zhang F, Li ML, Wang XA, Jin YP, Zhang YJ, Lu W, Wu WG, Shu YJ, Weng H, Cao Y, et al. LncRNA-PAGBC acts as a microRNA sponge and promotes gallbladder tumorigenesis. Embo Reports. PMID 28887321 DOI: 10.15252/embr.201744147  0.332
2017 Chwalenia K, Facemire L, Li H. Chimeric RNAs in cancer and normal physiology. Wiley Interdisciplinary Reviews. Rna. PMID 28589684 DOI: 10.1002/wrna.1427  0.326
2017 Ehteshami M, Zhou L, Amiralaei S, Shelton JR, Cho JH, Zhang H, Li H, Lu X, Ozturk T, Stanton R, Amblard F, McBrayer TR, Coats SJ, Schinazi RF. Nucleotide Substrate Specificity of Hepatitis C Analogs for Human Mitochondrial RNA Polymerase. Antimicrobial Agents and Chemotherapy. PMID 28559253 DOI: 10.1128/Aac.00492-17  0.306
2017 Sefcikova J, Roth M, Yu G, Li H. Cas6 processes tight and relaxed repeat RNA via multiple mechanisms: A hypothesis. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 28493337 DOI: 10.1002/Bies.201700019  0.685
2017 Li H, Yang S, Yu G, Shen L, Fan J, Xu L, Zhang H, Zhao N, Zeng Z, Hu T, Wen J, Zu Y. Aptamer Internalization via Endocytosis Inducing S-Phase Arrest and Priming Maver-1 Lymphoma Cells for Cytarabine Chemotherapy. Theranostics. 7: 1204-1213. PMID 28435459 DOI: 10.7150/thno.17069  0.44
2017 Wei LH, Yan S, Teo YY, Huang YZ, Wang LX, Yu G, Saw WY, Ong RT, Lu Y, Zhang C, Xu SH, Jin L, Li H. Phylogeography of Y-chromosome haplogroup O3a2b2-N6 reveals patrilineal traces of Austronesian populations on the eastern coastal regions of Asia. Plos One. 12: e0175080. PMID 28380021 DOI: 10.1371/Journal.Pone.0175080  0.39
2017 Li H, Huang Y, Xiao Y. A pair-conformation-dependent scoring function for evaluating 3D RNA-protein complex structures. Plos One. 12: e0174662. PMID 28358834 DOI: 10.1371/journal.pone.0174662  0.31
2017 Tsui TK, Hand TH, Duboy EC, Li H. The impact of DNA topology and guide length on target selection by a cytosine-specific Cas9. Acs Synthetic Biology. PMID 28277645 DOI: 10.1021/Acssynbio.7B00050  0.807
2017 Wang PX, Ji YX, Zhang XJ, Zhao LP, Yan ZZ, Zhang P, Shen LJ, Yang X, Fang J, Tian S, Zhu XY, Gong J, Zhang X, Wei QF, Wang Y, ... ... Li H, et al. Targeting CASP8 and FADD-like apoptosis regulator ameliorates nonalcoholic steatohepatitis in mice and nonhuman primates. Nature Medicine. PMID 28218919 DOI: 10.1038/nm.4290  0.501
2017 Tian S, Yu G, He H, Liu P, Marshall AG, Demeler B, Stagg SM, Li H. Structure and function of a snoRNP maturation complex Acta Crystallographica Section a Foundations and Advances. 73: a306-a306. DOI: 10.1107/S0108767317097008  0.684
2017 Kin Martin Tsui T, Hand TH, Li H. The Impact of DNA Topology on Target Selection by a Cytosine-Specific Cas9 Biophysical Journal. 112: 71a. DOI: 10.1016/J.Bpj.2016.11.431  0.419
2016 Jia Y, Xie Z, Li H. Intergenically Spliced Chimeric RNAs in Cancer. Trends in Cancer. 2: 475-484. PMID 28741477 DOI: 10.1016/j.trecan.2016.07.006  0.34
2016 Huang Y, Li H, Xiao Y. Using 3dRPC for RNA-protein complex structure prediction. Biophysics Reports. 2: 95-99. PMID 28317012 DOI: 10.1007/s41048-017-0034-y  0.37
2016 Jia Y, Xie Z, Li H. Intergenically Spliced Chimeric RNAs in Cancer. Trends in Cancer. 2: 475-484. PMID 28210711 DOI: 10.1016/j.trecan.2016.07.006  0.339
2016 Zhao B, Lu M, Wang D, Li H, He X. Genome-Wide Identification of Long Noncoding RNAs in Human Intervertebral Disc Degeneration by RNA Sequencing. Biomed Research International. 2016: 3684875. PMID 28097131 DOI: 10.1155/2016/3684875  0.337
2016 Zhang S, Li H, Zhang L, Li J, Wang R, Wang M. Effects of troxerutin on cognitive deficits and glutamate cysteine ligase subunits in the hippocampus of streptozotocin-induced Type 1 diabetes mellitus rats. Brain Research. PMID 27998794 DOI: 10.1016/j.brainres.2016.12.009  0.486
2016 Li H, Hao X, Wang H, Liu Z, He Y, Pu M, Zhang H, Yu H, Duan J, Qu S. Circular RNA Expression Profile of Pancreatic Ductal Adenocarcinoma Revealed by Microarray. Cellular Physiology and Biochemistry : International Journal of Experimental Cellular Physiology, Biochemistry, and Pharmacology. 40: 1334-1344. PMID 27997903 DOI: 10.1159/000453186  0.34
2016 Wei LH, Yan S, Yu G, Huang YZ, Yao DL, Li SL, Jin L, Li H. Genetic trail for the early migrations of Aisin Gioro, the imperial house of the Qing dynasty. Journal of Human Genetics. PMID 27853133 DOI: 10.1038/Jhg.2016.142  0.411
2016 Xie Z, Babiceanu M, Kumar S, Jia Y, Qin F, Barr FG, Li H. Fusion transcriptome profiling provides insights into alveolar rhabdomyosarcoma. Proceedings of the National Academy of Sciences of the United States of America. PMID 27799565 DOI: 10.1073/pnas.1612734113  0.354
2016 Long T, Li J, Li H, Zhou M, Zhou XL, Liu RJ, Wang ED. Sequence-specific and Shape-selective RNA Recognition by the Human RNA m5C Methyltransferase NSun6. The Journal of Biological Chemistry. PMID 27703015 DOI: 10.1074/jbc.M116.742569  0.301
2016 Qu S, Zhong Y, Shang R, Zhang X, Song W, Kjems J, Li H. The emerging landscape of circular RNA in life processes. Rna Biology. 1-8. PMID 27617908 DOI: 10.1080/15476286.2016.1220473  0.312
2016 Wang T, He Q, Li H, Ding J, Wen P, Zhang Q, Xiang J, Li Q, Xuan L, Kong L, Mao Y, Zhu Y, Shen J, Liang B, Li H. An Optimized Method for Accurate Fetal Sex Prediction and Sex Chromosome Aneuploidy Detection in Non-Invasive Prenatal Testing. Plos One. 11: e0159648. PMID 27441628 DOI: 10.1371/journal.pone.0159648  0.328
2016 Shao Y, Richter H, Sun S, Sharma K, Urlaub H, Randau L, Li H. A Non-Stem-Loop CRISPR RNA Is Processed by Dual Binding Cas6. Structure (London, England : 1993). PMID 26996962 DOI: 10.1016/J.Str.2016.02.009  0.487
2016 Elmore JR, Sheppard NF, Ramia N, Deighan T, Li H, Terns RM, Terns MP. Bipartite recognition of target RNAs activates DNA cleavage by the Type III-B CRISPR-Cas system. Genes & Development. PMID 26848045 DOI: 10.1101/Gad.272153.115  0.823
2016 Yu G, Li H, Yang S, Wen J, Niu J, Zu Y. ssDNA Aptamer Specifically Targets and Selectively Delivers Cytotoxic Drug Doxorubicin to HepG2 Cells. Plos One. 11: e0147674. PMID 26808385 DOI: 10.1371/Journal.Pone.0147674  0.437
2015 Tsui TK, Li H. Structure Principles of CRISPR-Cas Surveillance and Effector Complexes. Annual Review of Biophysics. 44: 229-55. PMID 26048003 DOI: 10.1146/Annurev-Biophys-060414-033939  0.811
2015 Zuo X, Sun L, Yin X, Gao J, Sheng Y, Xu J, Zhang J, He C, Qiu Y, Wen G, Tian H, Zheng X, Liu S, Wang W, Li W, ... ... Li H, et al. Whole-exome SNP array identifies 15 new susceptibility loci for psoriasis. Nature Communications. 6: 6793. PMID 25854761 DOI: 10.1038/Ncomms7793  0.334
2015 Li H. Structural Principles of CRISPR RNA Processing. Structure. 23: 13-20. PMID 25435327 DOI: 10.1016/J.Str.2014.10.006  0.528
2014 Ramia NF, Spilman M, Tang L, Shao Y, Elmore J, Hale C, Cocozaki A, Bhattacharya N, Terns RM, Terns MP, Li H, Stagg SM. Essential structural and functional roles of the Cmr4 subunit in RNA cleavage by the Cmr CRISPR-Cas complex. Cell Reports. 9: 1610-7. PMID 25482566 DOI: 10.1016/J.Celrep.2014.11.007  0.823
2014 Hale CR, Cocozaki A, Li H, Terns RM, Terns MP. Target RNA capture and cleavage by the Cmr type III-B CRISPR-Cas effector complex. Genes & Development. 28: 2432-43. PMID 25367038 DOI: 10.1101/Gad.250712.114  0.842
2014 Peng Y, Yu G, Tian S, Li H. Co-expression and co-purification of archaeal and eukaryal box C/D RNPs. Plos One. 9: e103096. PMID 25078083 DOI: 10.1371/Journal.Pone.0103096  0.685
2014 Ramia NF, Tang L, Cocozaki AI, Li H. Staphylococcus epidermidis Csm1 is a 3'-5' exonuclease. Nucleic Acids Research. 42: 1129-38. PMID 24121684 DOI: 10.1093/Nar/Gkt914  0.815
2013 He BJ, Nolte G, Nagata K, Takano D, Yamazaki T, Fujimaki Y, Maeda T, Satoh Y, Heckers S, George MS, Lopes da Silva F, de Munck JC, Van Houdt PJ, Verdaasdonk RM, Ossenblok P, ... ... Li H, et al. Abstracts of Presentations at the International Conference on Basic and Clinical Multimodal Imaging (BaCI), a Joint Conference of the International Society for Neuroimaging in Psychiatry (ISNIP), the International Society for Functional Source Imaging (ISFSI), the International Society for Bioelectromagnetism (ISBEM), the International Society for Brain Electromagnetic Topography (ISBET), and the EEG and Clinical Neuroscience Society (ECNS), in Geneva, Switzerland, September 5-8, 2013. Clinical Eeg and Neuroscience. PMID 24368763 DOI: 10.1177/1550059413507209  0.733
2013 Spilman M, Cocozaki A, Hale C, Shao Y, Ramia N, Terns R, Terns M, Li H, Stagg S. Structure of an RNA silencing complex of the CRISPR-Cas immune system. Molecular Cell. 52: 146-52. PMID 24119404 DOI: 10.1016/J.Molcel.2013.09.008  0.826
2013 Shao Y, Li H. Recognition and cleavage of a nonstructured CRISPR RNA by its processing endoribonuclease Cas6. Structure (London, England : 1993). 21: 385-93. PMID 23454186 DOI: 10.1016/J.Str.2013.01.010  0.517
2013 Shao Y, Cocozaki AI, Ramia NF, Terns RM, Terns MP, Li H. Structure of the Cmr2-Cmr3 subcomplex of the Cmr RNA silencing complex. Structure (London, England : 1993). 21: 376-84. PMID 23395183 DOI: 10.1016/J.Str.2013.01.002  0.831
2012 Cocozaki AI, Ramia NF, Shao Y, Hale CR, Terns RM, Terns MP, Li H. Structure of the Cmr2 subunit of the CRISPR-Cas RNA silencing complex. Structure (London, England : 1993). 20: 545-53. PMID 22405013 DOI: 10.1016/J.Str.2012.01.018  0.806
2012 Wang R, Li H. The mysterious RAMP proteins and their roles in small RNA-based immunity. Protein Science : a Publication of the Protein Society. 21: 463-70. PMID 22323284 DOI: 10.1002/Pro.2044  0.702
2012 Wang R, Zheng H, Preamplume G, Shao Y, Li H. The impact of CRISPR repeat sequence on structures of a Cas6 protein-RNA complex. Protein Science : a Publication of the Protein Society. 21: 405-17. PMID 22238224 DOI: 10.1002/Pro.2028  0.724
2011 Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YY, Keilbaugh SA, Bewtra M, Knights D, Walters WA, Knight R, Sinha R, Gilroy E, Gupta K, Baldassano R, Nessel L, ... Li H, et al. Linking long-term dietary patterns with gut microbial enterotypes. Science (New York, N.Y.). 334: 105-8. PMID 21885731 DOI: 10.1126/Science.1208344  0.74
2011 Wang R, Preamplume G, Terns MP, Terns RM, Li H. Interaction of the Cas6 riboendonuclease with CRISPR RNAs: recognition and cleavage. Structure (London, England : 1993). 19: 257-64. PMID 21300293 DOI: 10.1016/J.Str.2010.11.014  0.719
2011 Buettner R, Corzano R, Rashid R, Lin J, Senthil M, Hedvat M, Schroeder A, Mao A, Herrmann A, Yim J, Li H, Yuan YC, Yakushijin K, Yakushijin F, Vaidehi N, et al. Alkylation of cysteine 468 in Stat3 defines a novel site for therapeutic development. Acs Chemical Biology. 6: 432-43. PMID 21226522 DOI: 10.1021/Cb100253E  0.655
2011 Zhou J, Liang B, Li H. Structural and functional evidence of high specificity of Cbf5 for ACA trinucleotide. Rna (New York, N.Y.). 17: 244-50. PMID 21149572 DOI: 10.1261/Rna.2415811  0.651
2011 Liang B, Li H. Structures of ribonucleoprotein particle modification enzymes. Quarterly Reviews of Biophysics. 44: 95-122. PMID 21108865 DOI: 10.1017/S0033583510000235  0.638
2010 Xue S, Wang R, Yang F, Terns RM, Terns MP, Zhang X, Maxwell ES, Li H. Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle. Molecular Cell. 39: 939-49. PMID 20864039 DOI: 10.1016/J.Molcel.2010.08.022  0.695
2010 Wu GD, Lewis JD, Hoffmann C, Chen YY, Knight R, Bittinger K, Hwang J, Chen J, Berkowsky R, Nessel L, Li H, Bushman FD. Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags. Bmc Microbiology. 10: 206. PMID 20673359 DOI: 10.1186/1471-2180-10-206  0.751
2010 Zhou J, Lv C, Liang B, Chen M, Yang W, Li H. Glycosidic bond conformation preference plays a pivotal role in catalysis of RNA pseudouridylation: a combined simulation and structural study. Journal of Molecular Biology. 401: 690-5. PMID 20615421 DOI: 10.1016/J.Jmb.2010.06.061  0.589
2010 Zhou J, Liang B, Li H. Functional and structural impact of target uridine substitutions on the H/ACA ribonucleoprotein particle pseudouridine synthase. Biochemistry. 49: 6276-81. PMID 20575532 DOI: 10.1021/Bi1006699  0.629
2009 Mitchell M, Xue S, Erdman R, Randau L, Söll D, Li H. Crystal structure and assembly of the functional Nanoarchaeum equitans tRNA splicing endonuclease. Nucleic Acids Research. 37: 5793-802. PMID 19578064 DOI: 10.1093/Nar/Gkp537  0.738
2009 Liang B, Zhou J, Kahen E, Terns RM, Terns MP, Li H. Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA. Nature Structural & Molecular Biology. 16: 740-6. PMID 19478803 DOI: 10.1038/Nsmb.1624  0.676
2008 Carte J, Wang R, Li H, Terns RM, Terns MP. Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes. Genes & Development. 22: 3489-96. PMID 19141480 DOI: 10.1101/Gad.1742908  0.716
2008 Calvin K, Xue S, Ellis C, Mitchell MH, Li H. Probing the catalytic triad of an archaeal RNA splicing endonuclease Biochemistry. 47: 13659-13665. PMID 19053288 DOI: 10.1021/Bi801141Q  0.82
2008 Liang B, Kahen EJ, Calvin K, Zhou J, Blanco M, Li H. Long-distance placement of substrate RNA by H/ACA proteins. Rna (New York, N.Y.). 14: 2086-94. PMID 18755842 DOI: 10.1261/Rna.1109808  0.821
2008 Calvin K, Li H. RNA-splicing endonuclease structure and function Cellular and Molecular Life Sciences. 65: 1176-1185. PMID 18217203 DOI: 10.1007/S00018-008-7393-Y  0.838
2008 Baker DL, Seyfried NT, Li H, Orlando R, Terns RM, Terns MP. Determination of protein-RNA interaction sites in the Cbf5-H/ACA guide RNA complex by mass spectrometric protein footprinting. Biochemistry. 47: 1500-10. PMID 18205399 DOI: 10.1021/Bi701606M  0.505
2008 Li H. Unveiling substrate RNA binding to H/ACA RNPs: one side fits all. Current Opinion in Structural Biology. 18: 78-85. PMID 18178425 DOI: 10.1016/J.Sbi.2007.11.004  0.501
2007 Liang B, Xue S, Terns RM, Terns MP, Li H. Substrate RNA positioning in the archaeal H/ACA ribonucleoprotein complex. Nature Structural & Molecular Biology. 14: 1189-95. PMID 18059286 DOI: 10.1038/Nsmb1336  0.656
2007 Oruganti S, Zhang Y, Li H, Robinson H, Terns MP, Terns RM, Yang W, Li H. Alternative conformations of the archaeal Nop56/58-fibrillarin complex imply flexibility in box C/D RNPs. Journal of Molecular Biology. 371: 1141-50. PMID 17617422 DOI: 10.1016/J.Jmb.2007.06.029  0.811
2007 Li H. Complexes of tRNA and maturation enzymes: shaping up for translation. Current Opinion in Structural Biology. 17: 293-301. PMID 17580114 DOI: 10.1016/J.Sbi.2007.05.002  0.468
2007 Min D, Xue S, Li H, Yang W. 'In-line attack' conformational effect plays a modest role in an enzyme-catalyzed RNA cleavage: a free energy simulation study. Nucleic Acids Research. 35: 4001-6. PMID 17553832 DOI: 10.1093/Nar/Gkm394  0.45
2007 Phipps KR, Li H. Protein-RNA contacts at crystal packing surfaces. Proteins. 67: 121-7. PMID 17211891 DOI: 10.1002/Prot.21230  0.457
2007 Calvin K, Li H. Achieving Specific RNA Cleavage Activity by an Inactive Splicing Endonuclease Subunit Through Engineered Oligomerization Journal of Molecular Biology. 366: 642-649. PMID 17174977 DOI: 10.1016/J.Jmb.2006.11.054  0.841
2006 Trotta CR, Paushkin SV, Patel M, Li H, Peltz SW. Cleavage of pre-tRNAs by the splicing endonuclease requires a composite active site. Nature. 441: 375-7. PMID 16710424 DOI: 10.1038/Nature04741  0.477
2006 Xue S, Calvin K, Li H. RNA recognition and cleavage by a splicing endonuclease Science. 312: 906-910. PMID 16690865 DOI: 10.1126/Science.1126629  0.837
2006 Rashid R, Liang B, Baker DL, Youssef OA, He Y, Phipps K, Terns RM, Terns MP, Li H. Crystal structure of a Cbf5-Nop10-Gar1 complex and implications in RNA-guided pseudouridylation and dyskeratosis congenita. Molecular Cell. 21: 249-60. PMID 16427014 DOI: 10.1016/J.Molcel.2005.11.017  0.807
2005 Randau L, Calvin K, Hall M, Yuan J, Podar M, Li H, Söll D. The heteromeric Nanoarchaeum equitans splicing endonuclease cleaves noncanonical bulge-helix-bulge motifs of joined tRNA halves. Proceedings of the National Academy of Sciences of the United States of America. 102: 17934-9. PMID 16330750 DOI: 10.1073/Pnas.0509197102  0.794
2005 Calvin K, Hall MD, Xu F, Xue S, Li H. Structural characterization of the catalytic subunit of a novel RNA splicing endonuclease Journal of Molecular Biology. 353: 952-960. PMID 16219321 DOI: 10.1016/J.Jmb.2005.09.035  0.838
2005 Oruganti Sv, Zhang Y, Li H. Structural comparison of yeast snoRNP and spliceosomal protein Snu13p with its homologs. Biochemical and Biophysical Research Communications. 333: 550-4. PMID 15963469 DOI: 10.1016/J.Bbrc.2005.05.141  0.83
2004 Aittaleb M, Visone T, Fenley MO, Li H. Structural and thermodynamic evidence for a stabilizing role of Nop5p in S-adenosyl-L-methionine binding to fibrillarin. The Journal of Biological Chemistry. 279: 41822-9. PMID 15286083 DOI: 10.1074/Jbc.M406209200  0.379
2004 Moore T, Zhang Y, Fenley MO, Li H. Molecular basis of box C/D RNA-protein interactions; cocrystal structure of archaeal L7Ae and a box C/D RNA. Structure (London, England : 1993). 12: 807-18. PMID 15130473 DOI: 10.1016/J.Str.2004.02.033  0.687
2004 Zhang Y, Li H. Structure determination of a truncated dimeric splicing endonuclease in pseudo-face-centered space group P2(1)2(1)2. Acta Crystallographica. Section D, Biological Crystallography. 60: 447-52. PMID 14993668 DOI: 10.1107/S0907444903029482  0.343
2004 Rashid R, Aittaleb M, Chen Q, Spiegel K, Demeler B, Li H. Erratum: Functional requirement for symmetric assembly of archaeal box C/D small ribonucleoprotein particles (Journal of Molecular Biology (2003) 333 (295-306) DOI: 10.1016/j.jmb.2003.08.012) Journal of Molecular Biology. 342: 1347. DOI: 10.1016/J.Jmb.2004.07.051  0.733
2003 Rashid R, Aittaleb M, Chen Q, Spiegel K, Demeler B, Li H. Functional requirement for symmetric assembly of archaeal box C/D small ribonucleoprotein particles. Journal of Molecular Biology. 333: 295-306. PMID 14529617 DOI: 10.1016/J.Jmb.2003.08.012  0.742
2003 Aittaleb M, Rashid R, Chen Q, Palmer JR, Daniels CJ, Li H. Structure and function of archaeal box C/D sRNP core proteins. Nature Structural Biology. 10: 256-63. PMID 12598892 DOI: 10.1038/Nsb905  0.755
2002 Lima S, Hildenbrand J, Korostelev A, Hattman S, Li H. Crystal structure of an RNA helix recognized by a zinc-finger protein: An 18-bp duplex at 1.6 Å resolution Rna. 8: 924-932. PMID 12166647 DOI: 10.1017/S1355838202028893  0.437
2001 Story RM, Li H, Abelson JN. Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii Proceedings of the National Academy of Sciences of the United States of America. 98: 1465-1470. PMID 11171974 DOI: 10.1073/Pnas.98.4.1465  0.672
2000 Li H, Abelson J. Crystal structure of a dimeric archaeal splicing endonuclease. Journal of Molecular Biology. 302: 639-48. PMID 10986124 DOI: 10.1006/Jmbi.2000.3941  0.69
1998 Li H, Trotta CR, Abelson J. Crystal structure and evolution of a transfer RNA splicing enzyme. Science (New York, N.Y.). 280: 279-84. PMID 9535656 DOI: 10.1126/Science.280.5361.279  0.68
1997 Li H, Dunn JJ, Luft BJ, Lawson CL. Crystal structure of Lyme disease antigen outer surface protein A complexed with an Fab. Proceedings of the National Academy of Sciences of the United States of America. 94: 3584-3589. PMID 9108020 DOI: 10.1073/Pnas.94.8.3584  0.318
1994 Goldstein BM, Li H, Jones JP, Bell JE, Zeidler J, Pankiewicz KW, Watanabe KA. CNAD: a potent and specific inhibitor of alcohol dehydrogenase. Journal of Medicinal Chemistry. 37: 392-9. PMID 8308865 DOI: 10.1021/Jm00029A011  0.574
1994 Li H, Hallows WH, Punzi JS, Marquez VE, Carrell HL, Pankiewicz KW, Watanabe KA, Goldstein BM. Crystallographic studies of two alcohol dehydrogenase-bound analogues of thiazole-4-carboxamide adenine dinucleotide (TAD), the active anabolite of the antitumor agent tiazofurin. Biochemistry. 33: 23-32. PMID 8286346 DOI: 10.1021/Bi00167A004  0.55
1994 Goldstein BM, Li H, Hallows WH, Langs DA, Franchetti P, Cappellacci L, Grifantini M. C-glycosyl bond conformation in oxazofurin: crystallographic and computational studies of the oxazole analogue of tiazofurin. Journal of Medicinal Chemistry. 37: 1684-8. PMID 8201602 DOI: 10.1021/Jm00037A019  0.563
1993 Li H, Kennedy SD, Goldstein BM. Solid-state and solution conformations of isotiazofurin: crystallographic, computational and 1H NMR studies. Acta Crystallographica. Section B, Structural Science. 49: 729-38. PMID 8397981 DOI: 10.1107/S0108768193001053  0.562
1992 Li H, Goldstein BM. Carboxamide group conformation in the nicotinamide and thiazole-4-carboxamide rings: implications for enzyme binding. Journal of Medicinal Chemistry. 35: 3560-7. PMID 1357174 DOI: 10.1021/Jm00097A013  0.563
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