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Philip C. Andrews - Publications

Affiliations: 
Biological Chemistry University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
proteomics
Website:
http://www.biochem.med.umich.edu/?q=andrews

123 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Samulak BM, Niu S, Andrews PC, Ruotolo BT. Ion Mobility-Mass Spectrometry Analysis of Crosslinked Intact Multiprotein Complexes: Enhanced Gas-phase Stabilities and Altered Dissociation Pathways. Analytical Chemistry. PMID 27078797 DOI: 10.1021/acs.analchem.6b00518  1
2016 Talkish J, Biedka S, Jakovljevic J, Zhang J, Tang L, Strahler JR, Andrews PC, Maddock JR, Woolford JL. Disruption of ribosome assembly in yeast blocks cotranscriptional pre-rRNA processing and affects the global hierarchy of ribosome biogenesis. Rna (New York, N.Y.). PMID 27036125 DOI: 10.1261/rna.055780.115  0.52
2015 Shively CA, Kweon HK, Norman KL, Mellacheruvu D, Xu T, Sheidy DT, Dobry CJ, Sabath I, Cosky EE, Tran EJ, Nesvizhskii A, Andrews PC, Kumar A. Large-Scale Analysis of Kinase Signaling in Yeast Pseudohyphal Development Identifies Regulation of Ribonucleoprotein Granules. Plos Genetics. 11: e1005564. PMID 26447709 DOI: 10.1371/journal.pgen.1005564  1
2014 Zhang C, Gao S, Molascon AJ, Wang Z, Gorovsky MA, Liu Y, Andrews PC. Bioinformatic and proteomic analysis of bulk histones reveals PTM crosstalk and chromatin features. Journal of Proteome Research. 13: 3330-7. PMID 24894457 DOI: 10.1021/pr5001829  1
2014 Pai DA, Kaplan CD, Kweon HK, Murakami K, Andrews PC, Engelke DR. RNAs nonspecifically inhibit RNA polymerase II by preventing binding to the DNA template. Rna (New York, N.Y.). 20: 644-55. PMID 24614752 DOI: 10.1261/rna.040444.113  1
2014 Johnson C, Kweon HK, Sheidy D, Shively CA, Mellacheruvu D, Nesvizhskii AI, Andrews PC, Kumar A. The yeast Sks1p kinase signaling network regulates pseudohyphal growth and glucose response. Plos Genetics. 10: e1004183. PMID 24603354 DOI: 10.1371/journal.pgen.1004183  1
2014 Zhang C, Gao S, Molascon AJ, Liu Y, Andrews PC. Quantitative proteomics reveals histone modifications in crosstalk with H3 lysine 27 methylation. Molecular & Cellular Proteomics : McP. 13: 749-59. PMID 24382802 DOI: 10.1074/mcp.M113.029025  1
2013 Gao S, Xiong J, Zhang C, Berquist BR, Yang R, Zhao M, Molascon AJ, Kwiatkowski SY, Yuan D, Qin Z, Wen J, Kapler GM, Andrews PC, Miao W, Liu Y. Impaired replication elongation in Tetrahymena mutants deficient in histone H3 Lys 27 monomethylation. Genes & Development. 27: 1662-79. PMID 23884606 DOI: 10.1101/gad.218966.113  1
2013 Zhang Y, Kweon HK, Shively C, Kumar A, Andrews PC. Towards systematic discovery of signaling networks in budding yeast filamentous growth stress response using interventional phosphorylation data. Plos Computational Biology. 9: e1003077. PMID 23825934 DOI: 10.1371/journal.pcbi.1003077  1
2013 Simon ES, Papoulias PG, Andrews PC. Selective collision-induced fragmentation of ortho-hydroxybenzyl-aminated lysyl-containing tryptic peptides. Rapid Communications in Mass Spectrometry : Rcm. 27: 1619-30. PMID 23765610 DOI: 10.1002/rcm.6611  0.52
2013 Kweon HK, Andrews PC. Quantitative analysis of global phosphorylation changes with high-resolution tandem mass spectrometry and stable isotopic labeling. Methods (San Diego, Calif.). 61: 251-9. PMID 23611819 DOI: 10.1016/j.ymeth.2013.04.010  1
2013 Zhang C, Liu Y, Andrews PC. Quantification of histone modifications using ¹⁵N metabolic labeling. Methods (San Diego, Calif.). 61: 236-43. PMID 23454290 DOI: 10.1016/j.ymeth.2013.02.004  1
2013 Zhang C, Molascon AJ, Gao S, Liu Y, Andrews PC. Quantitative proteomics reveals that the specific methyltransferases Txr1p and Ezl2p differentially affect the mono-, di- and trimethylation states of histone H3 lysine 27 (H3K27). Molecular & Cellular Proteomics : McP. 12: 1678-88. PMID 23150054 DOI: 10.1074/mcp.M112.021733  1
2012 Chen X, Andrews PC, Wang Y. Quantitative analysis of liver Golgi proteome in the cell cycle. Methods in Molecular Biology (Clifton, N.J.). 909: 125-40. PMID 22903713 DOI: 10.1007/978-1-61779-959-4_9  1
2012 Ray BN, Kweon HK, Argetsinger LS, Fingar DC, Andrews PC, Carter-Su C. Research resource: identification of novel growth hormone-regulated phosphorylation sites by quantitative phosphoproteomics. Molecular Endocrinology (Baltimore, Md.). 26: 1056-73. PMID 22570334 DOI: 10.1210/me.2011-1258  1
2012 Zhang C, Walker AK, Zand R, Moscarello MA, Yan JM, Andrews PC. Myelin basic protein undergoes a broader range of modifications in mammals than in lower vertebrates. Journal of Proteome Research. 11: 4791-802. PMID 22420465 DOI: 10.1021/pr201196e  1
2012 Simon ES, Papoulias PG, Andrews PC. Substituent effects on the gas-phase fragmentation reactions of protonated peptides containing benzylamine-derivatized lysyl residues. Rapid Communications in Mass Spectrometry : Rcm. 26: 631-8. PMID 22328216 DOI: 10.1002/rcm.6141  1
2012 Clifford-Nunn B, Showalter HD, Andrews PC. Quaternary diamines as mass spectrometry cleavable crosslinkers for protein interactions. Journal of the American Society For Mass Spectrometry. 23: 201-12. PMID 22131227 DOI: 10.1007/s13361-011-0288-4  1
2011 Snider NT, Weerasinghe SV, Singla A, Leonard JM, Hanada S, Andrews PC, Lok AS, Omary MB. Energy determinants GAPDH and NDPK act as genetic modifiers for hepatocyte inclusion formation. The Journal of Cell Biology. 195: 217-29. PMID 22006949 DOI: 10.1083/jcb.201102142  1
2011 Sahasranaman A, Dembowski J, Strahler J, Andrews P, Maddock J, Woolford JL. Assembly of Saccharomyces cerevisiae 60S ribosomal subunits: role of factors required for 27S pre-rRNA processing. The Embo Journal. 30: 4020-32. PMID 21926967 DOI: 10.1038/emboj.2011.338  1
2011 Yue T, Partyka K, Maupin KA, Hurley M, Andrews P, Kaul K, Moser AJ, Zeh H, Brand RE, Haab BB. Identification of blood-protein carriers of the CA 19-9 antigen and characterization of prevalence in pancreatic diseases. Proteomics. 11: 3665-74. PMID 21751362 DOI: 10.1002/pmic.201000827  1
2011 Sikora AE, Zielke RA, Lawrence DA, Andrews PC, Sandkvist M. Proteomic analysis of the Vibrio cholerae type II secretome reveals new proteins, including three related serine proteases. The Journal of Biological Chemistry. 286: 16555-66. PMID 21385872 DOI: 10.1074/jbc.M110.211078  1
2011 Smith BE, Hill JA, Gjukich MA, Andrews PC. Tranche distributed repository and ProteomeCommons.org. Methods in Molecular Biology (Clifton, N.J.). 696: 123-45. PMID 21063945 DOI: 10.1007/978-1-60761-987-1_8  1
2010 Chen X, Karnovsky A, Sans MD, Andrews PC, Williams JA. Molecular characterization of the endoplasmic reticulum: insights from proteomic studies. Proteomics. 10: 4040-52. PMID 21080494 DOI: 10.1002/pmic.201000234  1
2010 Simon ES, Papoulias PG, Andrews PC. Gas-phase fragmentation characteristics of benzyl-aminated lysyl-containing tryptic peptides. Journal of the American Society For Mass Spectrometry. 21: 1624-32. PMID 20471281 DOI: 10.1016/j.jasms.2010.04.006  1
2010 Hill JA, Smith BE, Papoulias PG, Andrews PC. ProteomeCommons.org collaborative annotation and project management resource integrated with the Tranche repository. Journal of Proteome Research. 9: 2809-11. PMID 20356086 DOI: 10.1021/pr1000972  1
2010 Ramacciotti E, Hawley AE, Wrobleski SK, Myers DD, Strahler JR, Andrews PC, Guire KE, Henke PK, Wakefield TW. Proteomics of microparticles after deep venous thrombosis. Thrombosis Research. 125: e269-74. PMID 20156641 DOI: 10.1016/j.thromres.2010.01.019  1
2010 Chen X, Simon ES, Xiang Y, Kachman M, Andrews PC, Wang Y. Quantitative proteomics analysis of cell cycle-regulated Golgi disassembly and reassembly. The Journal of Biological Chemistry. 285: 7197-207. PMID 20056612 DOI: 10.1074/jbc.M109.047084  1
2010 Chen X, Sans MD, Strahler JR, Karnovsky A, Ernst SA, Michailidis G, Andrews PC, Williams JA. Quantitative organellar proteomics analysis of rough endoplasmic reticulum from normal and acute pancreatitis rat pancreas. Journal of Proteome Research. 9: 885-96. PMID 19954227 DOI: 10.1021/pr900784c  1
2009 Singh A, Wirtz M, Parker N, Hogan M, Strahler J, Michailidis G, Schmidt S, Vidal-Puig A, Diano S, Andrews P, Brand MD, Friedman J. Leptin-mediated changes in hepatic mitochondrial metabolism, structure, and protein levels. Proceedings of the National Academy of Sciences of the United States of America. 106: 13100-5. PMID 19622746 DOI: 10.1073/pnas.0903723106  1
2009 Bell AW, Deutsch EW, Au CE, Kearney RE, Beavis R, Sechi S, Nilsson T, Bergeron JJ. A HUPO test sample study reveals common problems in mass spectrometry-based proteomics. Nature Methods. 6: 423-30. PMID 19448641 DOI: 10.1038/nmeth.1333  1
2009 Rodriguez H, Snyder M, Uhlén M, Andrews P, Beavis R, Borchers C, Chalkley RJ, Cho SY, Cottingham K, Dunn M, Dylag T, Edgar R, Hare P, Heck AJ, Hirsch RF, et al. Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: the Amsterdam principles. Journal of Proteome Research. 8: 3689-92. PMID 19344107 DOI: 10.1021/pr900023z  1
2009 Chen X, Andrews PC. Quantitative proteomics analysis of pancreatic zymogen granule membrane proteins. Methods in Molecular Biology (Clifton, N.J.). 528: 327-38. PMID 19153703 DOI: 10.1007/978-1-60327-310-7_23  1
2009 Keshamouni VG, Jagtap P, Michailidis G, Strahler JR, Kuick R, Reka AK, Papoulias P, Krishnapuram R, Srirangam A, Standiford TJ, Andrews PC, Omenn GS. Temporal quantitative proteomics by iTRAQ 2D-LC-MS/MS and corresponding mRNA expression analysis identify post-transcriptional modulation of actin-cytoskeleton regulators during TGF-beta-Induced epithelial-mesenchymal transition. Journal of Proteome Research. 8: 35-47. PMID 19118450 DOI: 10.1021/pr8006478  1
2009 Ulintz PJ, Yocum AK, Bodenmiller B, Aebersold R, Andrews PC, Nesvizhskii AI. Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification. Journal of Proteome Research. 8: 887-99. PMID 19072539 DOI: 10.1021/pr800535h  1
2009 Abdullah NM, Kachman M, Walker A, Hawley AE, Wrobleski SK, Myers DD, Strahler JR, Andrews PC, Michailidis GC, Ramacciotti E, Henke PK, Wakefield TW. Microparticle surface protein are associated with experimental venous thrombosis: a preliminary study. Clinical and Applied Thrombosis/Hemostasis : Official Journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis. 15: 201-8. PMID 19028772 DOI: 10.1177/1076029608326753  1
2008 Falkner JA, Falkner JW, Yocum AK, Andrews PC. A spectral clustering approach to MS/MS identification of post-translational modifications. Journal of Proteome Research. 7: 4614-22. PMID 18800783 DOI: 10.1021/pr800226w  1
2008 Chen X, Ulintz PJ, Simon ES, Williams JA, Andrews PC. Global topology analysis of pancreatic zymogen granule membrane proteins. Molecular & Cellular Proteomics : McP. 7: 2323-36. PMID 18682380 DOI: 10.1074/mcp.M700575-MCP200  1
2008 Christensen JB, Byrd SA, Walker AK, Strahler JR, Andrews PC, Imperiale MJ. Presence of the adenovirus IVa2 protein at a single vertex of the mature virion. Journal of Virology. 82: 9086-93. PMID 18614642 DOI: 10.1128/JVI.01024-08  1
2008 Scott AE, Simon E, Park SK, Andrews P, Zusman DR. Site-specific receptor methylation of FrzCD in Myxococcus xanthus is controlled by a tetra-trico peptide repeat (TPR) containing regulatory domain of the FrzF methyltransferase Molecular Microbiology. 69: 724-735. PMID 18554333 DOI: 10.1111/j.1365-2958.2008.06323.x  1
2008 Falkner JA, Hill JA, Andrews PC. Proteomics FASTA archive and reference resource. Proteomics. 8: 1756-7. PMID 18442177 DOI: 10.1002/pmic.200701194  1
2008 Simon ES, Young M, Chan A, Bao ZQ, Andrews PC. Improved enrichment strategies for phosphorylated peptides on titanium dioxide using methyl esterification and pH gradient elution. Analytical Biochemistry. 377: 234-42. PMID 18396144 DOI: 10.1016/j.ab.2008.03.024  1
2008 Chen X, Andrews PC. Purification and proteomics analysis of pancreatic zymogen granule membranes. Methods in Molecular Biology (Clifton, N.J.). 432: 275-87. PMID 18370025 DOI: 10.1007/978-1-59745-028-7_19  1
2008 Yocum AK, Gratsch TE, Leff N, Strahler JR, Hunter CL, Walker AK, Michailidis G, Omenn GS, O'Shea KS, Andrews PC. Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation. Molecular & Cellular Proteomics : McP. 7: 750-67. PMID 18304949 DOI: 10.1074/mcp.M700399-MCP200  1
2008 Leichert LI, Gehrke F, Gudiseva HV, Blackwell T, Ilbert M, Walker AK, Strahler JR, Andrews PC, Jakob U. Quantifying changes in the thiol redox proteome upon oxidative stress in vivo. Proceedings of the National Academy of Sciences of the United States of America. 105: 8197-202. PMID 18287020 DOI: 10.1073/pnas.0707723105  1
2008 Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Björling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AS, et al. Human Proteinpedia enables sharing of human protein data. Nature Biotechnology. 26: 164-7. PMID 18259167 DOI: 10.1038/nbt0208-164  1
2008 Buckley M, Walker A, Ho SY, Yang Y, Smith C, Ashton P, Oates JT, Cappellini E, Koon H, Penkman K, Elsworth B, Ashford D, Solazzo C, Andrews P, Strahler J, et al. Comment on "Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry". Science (New York, N.Y.). 319: 33; author reply 33. PMID 18174420 DOI: 10.1126/science.1147046  1
2008 Ulintz PJ, Bodenmiller B, Andrews PC, Aebersold R, Nesvizhskii AI. Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence. Molecular & Cellular Proteomics : McP. 7: 71-87. PMID 17872894 DOI: 10.1074/mcp.M700128-MCP200  1
2008 Reinert K, Conrad T, Kohlbacher O. Bioinformatics: Bioinformatics Support for Mass Spectrometric Quality Control Proteomics Sample Preparation. 423-432. DOI: 10.1002/9783527622832.ch13  1
2007 Forrester S, Qiu J, Mangold L, Partin A, Misek D, Phinney B, Whitten D, Andrews P, Diamandis E, Omenn GS, Hanash S, Haab BB. An experimental strategy for quantitative analysis of the humoral immune response to prostate cancer antigens using natural protein microarrays. Proteomics. Clinical Applications. 1: 494-505. PMID 21136701 DOI: 10.1002/prca.200600802  1
2007 Parrish JR, Yu J, Liu G, Hines JA, Chan JE, Mangiola BA, Zhang H, Pacifico S, Fotouhi F, DiRita VJ, Ideker T, Andrews P, Finley RL. A proteome-wide protein interaction map for Campylobacter jejuni. Genome Biology. 8: R130. PMID 17615063 DOI: 10.1186/gb-2007-8-7-r130  1
2007 Jiang M, Sullivan SM, Walker AK, Strahler JR, Andrews PC, Maddock JR. Identification of novel Escherichia coli ribosome-associated proteins using isobaric tags and multidimensional protein identification techniques. Journal of Bacteriology. 189: 3434-44. PMID 17337586 DOI: 10.1128/JB.00090-07  1
2007 Falkner JA, Kachman M, Veine DM, Walker A, Strahler JR, Andrews PC. Validated MALDI-TOF/TOF mass spectra for protein standards. Journal of the American Society For Mass Spectrometry. 18: 850-5. PMID 17329120 DOI: 10.1016/j.jasms.2007.01.010  1
2007 Jayapandian M, Chapman A, Tarcea VG, Yu C, Elkiss A, Ianni A, Liu B, Nandi A, Santos C, Andrews P, Athey B, States D, Jagadish HV. Michigan molecular interactions (MiMI): Putting the jigsaw puzzle together Nucleic Acids Research. 35: D566-D571. PMID 17130145 DOI: 10.1093/nar/gkl859  1
2007 Falkner JA, Falkner JW, Andrews PC. ProteomeCommons.org IO Framework: reading and writing multiple proteomics data formats. Bioinformatics (Oxford, England). 23: 262-3. PMID 17121776 DOI: 10.1093/bioinformatics/btl573  1
2007 Kozarova A, Sliskovic I, Mutus B, Simon ES, Andrews PC, Vacratsis PO. Identification of redox sensitive thiols of protein disulfide isomerase using isotope coded affinity technology and mass spectrometry. Journal of the American Society For Mass Spectrometry. 18: 260-9. PMID 17074504 DOI: 10.1016/j.jasms.2006.09.023  1
2007 Andrews P, Falkner J. Open access to proteomics data: A valuable resource for biology and medicine Journal of Proteome Research. 6: 2047-2048. DOI: 10.1021/pr0707509  1
2007 Humpula JF, Ostrom PH, Gandhi H, Strahler JR, Walker AK, Stafford TW, Smith JJ, Voorhies MR, George Corner R, Andrews PC. Investigation of the protein osteocalcin of Camelops hesternus: Sequence, structure and phylogenetic implications Geochimica Et Cosmochimica Acta. 71: 5956-5967. DOI: 10.1016/j.gca.2007.09.003  1
2006 Jiang M, Datta K, Walker A, Strahler J, Bagamasbad P, Andrews PC, Maddock JR. The Escherichia coli GTPase CgtAE is involved in late steps of large ribosome assembly. Journal of Bacteriology. 188: 6757-70. PMID 16980477 DOI: 10.1128/JB.00444-06  1
2006 Jagtap P, Michailidis G, Zielke R, Walker AK, Patel N, Strahler JR, Driks A, Andrews PC, Maddock JR. Early events of Bacillus anthracis germination identified by time-course quantitative proteomics. Proteomics. 6: 5199-211. PMID 16927434 DOI: 10.1002/pmic.200600314  1
2006 Garcia BA, Joshi S, Thomas CE, Chitta RK, Diaz RL, Busby SA, Andrews PC, Ogorzalek Loo RR, Shabanowitz J, Kelleher NL, Mizzen CA, Allis CD, Hunt DF. Comprehensive phosphoprotein analysis of linker histone H1 from Tetrahymena thermophila. Molecular & Cellular Proteomics : McP. 5: 1593-609. PMID 16835217 DOI: 10.1074/mcp.M600086-MCP200  1
2006 Keshamouni VG, Michailidis G, Grasso CS, Anthwal S, Strahler JR, Walker A, Arenberg DA, Reddy RC, Akulapalli S, Thannickal VJ, Standiford TJ, Andrews PC, Omenn GS. Differential protein expression profiling by iTRAQ-2DLC-MS/MS of lung cancer cells undergoing epithelial-mesenchymal transition reveals a migratory/invasive phenotype. Journal of Proteome Research. 5: 1143-54. PMID 16674103 DOI: 10.1021/pr050455t  1
2006 Falkner JA, Falkner JW, Andrews PC. ProteomeCommons.org JAF: reference information and tools for proteomics. Bioinformatics (Oxford, England). 22: 632-3. PMID 16434446 DOI: 10.1093/bioinformatics/btk015  1
2006 Ulintz PJ, Zhu J, Qin ZS, Andrews PC. Improved classification of mass spectrometry database search results using newer machine learning approaches. Molecular & Cellular Proteomics : McP. 5: 497-509. PMID 16321970 DOI: 10.1074/mcp.M500233-MCP200  1
2006 Ostrom PH, Gandhi H, Strahler JR, Walker AK, Andrews PC, Leykam J, Stafford TW, Kelly RL, Walker DN, Buckley M, Humpula J. Unraveling the sequence and structure of the protein osteocalcin from a 42 ka fossil horse Geochimica Et Cosmochimica Acta. 70: 2034-2044. DOI: 10.1016/j.gca.2006.01.004  1
2006 Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, ... ... Andrews P, et al. Overview of the HUPO Plasma Proteome Project: Results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database Exploring the Human Plasma Proteome. 1-35. DOI: 10.1002/9783527609482.ch1  1
2006 Falkner JA, Ulintz PJ, Andrews PC. A code and data archival and dissemination tool for the proteomics community American Biotechnology Laboratory. 24: 28-30.  1
2005 Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, ... ... Andrews P, et al. Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. Proteomics. 5: 3226-45. PMID 16104056 DOI: 10.1002/pmic.200500358  1
2005 Misek DE, Kuick R, Wang H, Galchev V, Deng B, Zhao R, Tra J, Pisano MR, Amunugama R, Allen D, Walker AK, Strahler JR, Andrews P, Omenn GS, Hanash SM. A wide range of protein isoforms in serum and plasma uncovered by a quantitative intact protein analysis system. Proteomics. 5: 3343-52. PMID 16047307 DOI: 10.1002/pmic.200500103  1
2005 Yamada K, Strahler JR, Andrews PC, Matthews RG. Regulation of human methylenetetrahydrofolate reductase by phosphorylation. Proceedings of the National Academy of Sciences of the United States of America. 102: 10454-9. PMID 16024724 DOI: 10.1073/pnas.0504786102  1
2005 Falkner J, Andrews P. Fast tandem mass spectra-based protein identification regardless of the number of spectra or potential modifications examined Bioinformatics. 21: 2177-2184. PMID 15746284 DOI: 10.1093/bioinformatics/bti362  1
2004 Chen X, Li C, Izumi T, Ernst SA, Andrews PC, Williams JA. Rab27b localizes to zymogen granules and regulates pancreatic acinar exocytosis. Biochemical and Biophysical Research Communications. 323: 1157-62. PMID 15451418 DOI: 10.1016/j.bbrc.2004.08.212  1
2004 Ge Y, Molloy MP, Chamberlain JS, Andrews PC. Differential expression of the skeletal muscle proteome in mdx mice at different ages. Electrophoresis. 25: 2576-85. PMID 15300778 DOI: 10.1002/elps.200406013  1
2003 Ge Y, Molloy MP, Chamberlain JS, Andrews PC. Proteomic analysis of mdx skeletal muscle: Great reduction of adenylate kinase 1 expression and enzymatic activity. Proteomics. 3: 1895-903. PMID 14625851 DOI: 10.1002/pmic.200300561  1
2002 Molloy MP, Phadke ND, Chen H, Tyldesley R, Garfin DE, Maddock JR, Andrews PC. Profiling the alkaline membrane proteome of Caulobacter crescentus with two-dimensional electrophoresis and mass spectrometry. Proteomics. 2: 899-910. PMID 12124935 DOI: 10.1002/1615-9861(200207)2:7<899::AID-PROT899>3.0.CO;2-Y  1
2002 Vazquez JA, Vazquez S, Walker AK, DiRita VJ, Andrews PC. Direct MALDI of Vibrio cholerae Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 235-236.  1
2002 Walker AK, Lin MX, Campbell JM, Andrews PC. The analysis and identification of proteins by MALDI-TOF MS/MS of proteins and large peptides Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 661-662.  1
2002 Vazquez S, DiRita VJ, Andrews PC. Proteomic comparison of pathogenic and non-pathogenic Vibrio cholerae strains Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 245-246.  1
2002 Kachman MT, Andrews PC. Alternatives to trypsin for peptide mapping using MALDI-TOF MS/MS Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 163-164.  1
2001 Molloy MP, Andrews PC. Phosphopeptide derivatization signatures to identify serine and threonine phosphorylated peptides by mass spectrometry. Analytical Chemistry. 73: 5387-94. PMID 11816564 DOI: 10.1021/ac0104227  1
2001 Phadke ND, Molloy MP, Steinhoff SA, Ulintz PJ, Andrews PC, Maddock JR. Analysis of the outer membrane proteome of Caulobacter crescentus by two-dimensional electrophoresis and mass spectrometry. Proteomics. 1: 705-20. PMID 11678040 DOI: 10.1002/1615-9861(200104)1:5<705::AID-PROT705>3.0.CO;2-N  1
2001 Loo RR, Cavalcoli JD, VanBogelen RA, Mitchell C, Loo JA, Moldover B, Andrews PC. Virtual 2-D gel electrophoresis: visualization and analysis of the E. coli proteome by mass spectrometry. Analytical Chemistry. 73: 4063-70. PMID 11569793 DOI: 10.1021/ac0101858  1
2001 Molloy MP, Phadke ND, Maddock JR, Andrews PC. Two-dimensional electrophoresis and peptide mass fingerprinting of bacterial outer membrane proteins. Electrophoresis. 22: 1686-96. PMID 11425224 DOI: 10.1002/1522-2683(200105)22:9<1686::AID-ELPS1686>3.0.CO;2-L  1
2001 Benndorf R, Sun X, Gilmont RR, Biederman KJ, Molloy MP, Goodmurphy CW, Cheng H, Andrews PC, Welsh MJ. HSP22, a new member of the small heat shock protein superfamily, interacts with mimic of phosphorylated HSP27 ((3D)HSP27). The Journal of Biological Chemistry. 276: 26753-61. PMID 11342557 DOI: 10.1074/jbc.M103001200  1
2001 Walker AK, Rymar G, Andrews PC. Mass spectrometric imaging of immobilized pH gradient gels and creation of "virtual" two-dimensional gels. Electrophoresis. 22: 933-45. PMID 11332761 DOI: 10.1002/1522-2683()22:5<933::AID-ELPS933>3.0.CO;2-9  1
2000 Livant DL, Brabec RK, Kurachi K, Allen DL, Wu Y, Haaseth R, Andrews P, Ethier SP, Markwart S. The PHSRN sequence induces extracellular matrix invasion and accelerates wound healing in obese diabetic mice. The Journal of Clinical Investigation. 105: 1537-45. PMID 10841512 DOI: 10.1172/JCI8527  1
2000 Burkhart CN, Burkhart CG, Williams S, Andrews PC, Adappa V, Arbogast J. In pursuit of ceruminolytic agents: a study of earwax composition. The American Journal of Otology. 21: 157-60. PMID 10733177  1
1999 Loo JA, Brown J, Critchley G, Mitchell C, Andrews PC, Ogorzalek Loo RR. High sensitivity mass spectrometric methods for obtaining intact molecular weights from gel-separated proteins. Electrophoresis. 20: 743-8. PMID 10344243 DOI: 10.1002/(SICI)1522-2683(19990101)20:4/5<743::AID-ELPS743>3.0.CO;2-I  1
1999 Ogorzalek Loo RR, Loo JA, Andrews PC. Obtaining molecular weights of proteins and their cleavage products by directly combining gel electrophoresis with mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 112: 473-85. PMID 10027272  1
1999 Ramamurthy N, Baliga N, Wakefield TW, Andrews PC, Yang VC, Meyerhoff ME. Determination of low-molecular-weight heparins and their binding to protamine and a protamine analog using polyion-sensitive membrane electrodes. Analytical Biochemistry. 266: 116-24. PMID 9887220 DOI: 10.1006/abio.1998.2947  1
1998 Faull KF, Feistner GJ, Conklin K, Roepstorff P, Andrews PC. Revised primary structures of rat pituitary gamma-lipotrophin and beta-endorphin. Neuropeptides. 32: 339-49. PMID 10102679 DOI: 10.1016/S0143-4179(98)90057-9  1
1998 Sun Q, Disher MJ, Rustad T, Telian SA, Andrews PC. AP30, a differential protein marker for perilymph and cerebrospinal fluid in middle ear fluid, has been purified and identified as human apolipoprotein D. Biochimica Et Biophysica Acta. 1384: 405-13. PMID 9659402 DOI: 10.1016/S0167-4838(97)00198-2  1
1997 Crozet Y, Wen JJ, Loo RO, Andrews PC, Spatola AF. Synthesis and characterization of cyclic pseudopeptide libraries containing thiomethylene and thiomethylene-sulfoxide amide bond surrogates Molecular Diversity. 3: 261-276. PMID 9850524  1
1997 Cavalcoli JD, VanBogelen RA, Andrews PC, Moldover B. Unique identification of proteins from small genome organisms: theoretical feasibility of high throughput proteome analysis. Electrophoresis. 18: 2703-8. PMID 9504801 DOI: 10.1002/elps.1150181503  1
1997 Hulin MS, Wakefield TW, Andrews PC, Wrobleski SK, Stoneham MD, Doyle AR, Zelenock GB, Jacobs LA, Shanley CJ, TenCate VM, Stanley JC. A novel protamine variant reversal of heparin anticoagulation in human blood in vitro Journal of Vascular Surgery. 26: 1043-1048. PMID 9423721 DOI: 10.1016/S0741-5214(97)70018-1  1
1997 Ogorzalek Loo RR, Mitchell C, Stevenson TI, Martin SA, Hines WM, Juhasz P, Patterson DH, Peltier JM, Loo JA, Andrews PC. Sensitivity and mass accuracy for proteins analyzed directly from polyacrylamide gels: Implications for proteome mapping Electrophoresis. 18: 382-390. PMID 9150916 DOI: 10.1002/elps.1150180312  1
1997 Hulin MS, Wakefield TW, Andrews PC, Wrobleski SK, Kadell AM, Downing LJ, Stanley JC. Comparison of the hemodynamic and hematologic toxicity of a protamine variant after reversal of low-molecular-weight heparin anticoagulation in a canine model Laboratory Animal Science. 47: 153-160. PMID 9150494  1
1997 Cox MH, O SJ, Clair MJ, Mukherjee R, Wakefield TW, Andrews PC, Stanley JC, Crawford FA, Spinale FG. Differential effects of novel protamine variants on myocyte contractile function with left ventricular failure. Surgery. 121: 304-13. PMID 9068672 DOI: 10.1016/S0039-6060(97)90359-7  1
1997 Ogorzalek Loo RR, Mitchell C, Stevenson TI, Loo JA, Andrews PC. Diffusive transfer to membranes as an effective interface between gel electrophoresis and mass spectrometry International Journal of Mass Spectrometry and Ion Processes. 169: 273-290.  1
1996 Miller CG, Bailey JM, Kenny JW, Swiderek K, Andrews PC, Mitchell C, Tropea J. Experimental strategies enabled by C-terminal protein sequence analysis American Biotechnology Laboratory. 14: 8-12. PMID 8703380  1
1996 Loo JA, DeJohn DE, Loo RRO, Andrews PC. Chapter 32. Application of Mass Spectrometry for Characterizing and Identifying Ligands from Combinatorial Libraries Annual Reports in Medicinal Chemistry. 31: 319-325. DOI: 10.1016/S0065-7743(08)60471-6  1
1990 Zheng L, Andrews PC, Hermodson MA, Dixon JE, Zalkin H. Cloning and structural characterization of porcine heart aconitase. The Journal of Biological Chemistry. 265: 2814-21. PMID 2303429  0.96
1989 Andrews PC, Dixon JE. Application of fast atom bombardment mass spectrometry to posttranslational modifications of neuropeptides. Methods in Enzymology. 168: 72-103. PMID 2566895  1
1988 Shibata D, Steczko J, Dixon JE, Andrews PC, Hermodson M, Axelrod B. Primary structure of soybean lipoxygenase L-2. The Journal of Biological Chemistry. 263: 6816-21. PMID 2834391  0.96
1987 Yazdanparast R, Andrews PC, Smith DL, Dixon JE. Assignment of disulfide bonds in proteins by fast atom bombardment mass spectrometry. The Journal of Biological Chemistry. 262: 2507-13. PMID 3818605  0.96
1987 Andrews PC, Brayton K, Dixon JE. Precursors to regulatory peptides: their proteolytic processing. Experientia. 43: 784-90. PMID 3297766 DOI: 10.1007/BF01945356  1
1987 Andrews PC, Dixon JE. Isolation of products and intermediates of pancreatic prosomatostatin processing: use of fast atom bombardment mass spectrometry as an aid in analysis of prohormone processing. Biochemistry. 26: 4853-61. PMID 2889466  1
1987 Andrews PC, Nichols R, Dixon JE. Post-translational processing of preprosomatostatin-II examined using fast atom bombardment mass spectrometry. The Journal of Biological Chemistry. 262: 12692-9. PMID 2887572  1
1987 Andrews PC, Dixon JE. A procedure for in situ alkylation of cystine residues on glass fiber prior to protein microsequence analysis. Analytical Biochemistry. 161: 524-8. PMID 2883913 DOI: 10.1016/0003-2697(87)90484-2  1
1986 Andrews PC, Dixon JE. Isolation and structure of the second of two major peptide products from the precursor to an anglerfish peptide homologous to neuropeptide Y. The Journal of Biological Chemistry. 261: 8674-7. PMID 3522578  1
1986 Noe BD, Andrews PC, Dixon JE, Spiess J. Cotranslational and posttranslational proteolytic processing of preprosomatostatin-I in intact islet tissue. The Journal of Cell Biology. 103: 1205-11. PMID 2876999  0.96
1986 Andrews PC, Dixon JE. Biosynthesis and processing of the somatostatin family of peptide hormones. Scandinavian Journal of Gastroenterology. Supplement. 119: 22-8. PMID 2876503 DOI: 10.3109/00365528609087428  1
1986 Minth CD, Andrews PC, Dixon JE. Characterization, sequence, and expression of the cloned human neuropeptide Y gene. The Journal of Biological Chemistry. 261: 11974-9. PMID 2427515  0.96
1985 Andrews PC, Hawke D, Shively JE, Dixon JE. A nonamidated peptide homologous to porcine peptide YY and neuropeptide YY. Endocrinology. 116: 2677-81. PMID 3838934 DOI: 10.1210/endo-116-6-2677  1
1985 Dixon JE, Andrews PC. Somatostatins of the channel catfish. Advances in Experimental Medicine and Biology. 188: 19-29. PMID 2863931  1
1984 Andrews PC, Hawke D, Shively JE, Dixon JE. Anglerfish preprosomatostatin II is processed to somatostatin-28 and contains hydroxylysine at residue 23. The Journal of Biological Chemistry. 259: 15021-4. PMID 6150931  1
1984 Aron DC, Andrews PC, Dixon JE, Roos BA. Identification of cellular prosomatostatin and nonsomatostatin peptides derived from its amino terminus. Biochemical and Biophysical Research Communications. 124: 450-6. PMID 6149749  0.96
1984 Andrews PC, Pubols MH, Hermodson MA, Sheares BT, Dixon JE. Structure of the 22-residue somatostatin from catfish. An O-glycosylated peptide having multiple forms. The Journal of Biological Chemistry. 259: 13267-72. PMID 6149220  0.96
1983 Dixon JE, Andrews PC, Collier K, Deschenes R, Funckes C, Lorenz L, Magazin M, Minth CD, Nichols R, Tavianini M. Cloning and biosynthetic studies of rat somatostatin. Scandinavian Journal of Gastroenterology. Supplement. 82: 25-31. PMID 6138851  1
1982 Andrews PC, Minth CD, Dixon JE. Immunochemical characterization of a proline endopeptidase from rat brain. Its relationship to proline endopeptidase from other tissues and from other species. The Journal of Biological Chemistry. 257: 5861-5. PMID 6802822  0.96
1981 Andrews PC, Dixon JE. Isolation and structure of a peptide hormone predicted from a mRNA sequence. A second somatostatin from the catfish pancreas. The Journal of Biological Chemistry. 256: 8267-70. PMID 6114953  1
1980 Taylor WL, Andrews PC, Henrikson CK, Dixon JE. New fluorogenic substrates for a rat brain proline endopeptidase. Analytical Biochemistry. 105: 58-64. PMID 7004269 DOI: 10.1016/0003-2697(80)90423-6  1
1980 Andrews PC, Hines CM, Dixon JE. Characterization of proline endopeptidase from rat brain. Biochemistry. 19: 5494-500. PMID 6779865  0.96
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