| Year |
Citation |
Score |
| 2024 |
Timme RE, Pfefer T, Bias CH, Allard MW, Huang X, Strain E, Balkey M. A Comprehensive Guide to Quality Assessment and Data Submission for Genomic Surveillance of Enteric Pathogens. Methods in Molecular Biology (Clifton, N.J.). 2852: 199-209. PMID 39235746 DOI: 10.1007/978-1-0716-4100-2_14 |
0.31 |
|
| 2024 |
Timme RE, Woods J, Jones JL, Calci KR, Rodriguez R, Barnes C, Leard E, Craven M, Chen H, Boerner C, Grim C, Windsor AM, Ramachandran P, Muruvanda T, Rand H, et al. SARS-CoV-2 wastewater variant surveillance: pandemic response leveraging FDA's GenomeTrakr network. Msystems. e0141523. PMID 38819130 DOI: 10.1128/msystems.01415-23 |
0.325 |
|
| 2023 |
Kocurek B, Ramachandran P, Grim CJ, Morin P, Howard L, Ottesen A, Timme R, Leonard SR, Rand H, Strain E, Tadesse D, Pettengill JB, Lacher DW, Mammel M, Jarvis KG. Application of quasimetagenomics methods to define microbial diversity and subtype in dairy and seafood production facilities. Microbiology Spectrum. e0148223. PMID 37812012 DOI: 10.1128/spectrum.01482-23 |
0.389 |
|
| 2023 |
Crawford MA, Lascols C, Lomonaco S, Timme RE, Fisher DJ, Anderson K, Hodge DR, Morse SA, Pillai SP, Sharma SK, Khan E, Allard MW, Hughes MA. draft genome sequences: 15 historical (1998-2004) and 30 contemporary (2015-2016) clinical isolates from Pakistan. Microbiology Resource Announcements. e0016323. PMID 37504519 DOI: 10.1128/MRA.00163-23 |
0.32 |
|
| 2022 |
Stevens EL, Carleton HA, Beal J, Tillman GE, Lindsey RL, Lauer AC, Pightling A, Jarvis KG, Ottesen A, Ramachandran P, Hintz L, Katz LS, Folster JP, Whichard JM, Trees E, ... Timme RE, et al. The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States. Journal of Food Protection. PMID 35259246 DOI: 10.4315/JFP-21-437 |
0.332 |
|
| 2022 |
Mitchell PK, Wang L, Stanhope BJ, Cronk BD, Anderson R, Mohan S, Zhou L, Sanchez S, Bartlett P, Maddox C, DeShambo V, Mani R, Hengesbach LM, Gresch S, Wright K, ... ... Timme R, et al. Multi-laboratory evaluation of the Illumina iSeq platform for whole genome sequencing of , and . Microbial Genomics. 8. PMID 35113783 DOI: 10.1099/mgen.0.000717 |
0.415 |
|
| 2021 |
Raufu IA, Ahmed OA, Aremu A, Ameh JA, Timme RE, Hendriksen RS, Ambali A. Antimicrobial and Genomic Characterization of Salmonella Nigeria from Pigs and Poultry in Ilorin, North-central, Nigeria. Journal of Infection in Developing Countries. 15: 1899-1909. PMID 35044949 DOI: 10.3855/jidc.15025 |
0.344 |
|
| 2021 |
Brown EW, Bell R, Zhang G, Timme R, Zheng J, Hammack TS, Allard MW. Salmonella Genomics in Public Health and Food Safety. Ecosal Plus. eESP00082020. PMID 34125583 DOI: 10.1128/ecosalplus.ESP-0008-2020 |
0.436 |
|
| 2021 |
Shariat NW, Timme RE, Walters AT. Phylogeny of subspecies by whole-genome sequencing reveals high incidence of polyphyly and low phase 1 H antigen variability. Microbial Genomics. PMID 33539276 DOI: 10.1099/mgen.0.000522 |
0.389 |
|
| 2020 |
Miller JJ, Weimer BC, Timme R, Lüdeke CHM, Pettengill JB, Bandoy DD, Weis AM, Kaufman J, Huang BC, Payne J, Strain E, Jones JL. Phylogenetic and Biogeographic Patterns of from North America Inferred from Whole Genome Sequence Data. Applied and Environmental Microbiology. PMID 33187991 DOI: 10.1128/AEM.01403-20 |
0.34 |
|
| 2020 |
Allard MW, Zheng J, Cao G, Timme R, Stevens E, Brown EW. Food Safety Genomics and Connections to One Health and the Clinical Microbiology Laboratory. Clinics in Laboratory Medicine. 40: 553-563. PMID 33121622 DOI: 10.1016/j.cll.2020.08.011 |
0.369 |
|
| 2020 |
Gonzalez-Escalona N, Kastanis GJ, Timme R, Roberson D, Balkey M, Tallent SM. Closed Genome Sequences of 28 Foodborne Pathogens from the CFSAN Verification Set, Determined by a Combination of Long and Short Reads. Microbiology Resource Announcements. 9. PMID 32354971 DOI: 10.1128/MRA.00152-20 |
0.411 |
|
| 2019 |
Timme RE, Sanchez Leon M, Allard MW. Correction to: Utilizing the Public GenomeTrakr Database for Foodborne Pathogen Traceback. Methods in Molecular Biology (Clifton, N.J.). 1918: C1. PMID 32052377 DOI: 10.1007/978-1-4939-9000-9_22 |
0.303 |
|
| 2019 |
Allard MW, Strain E, Rand H, Melka D, Correll WA, Hintz L, Stevens E, Timme R, Lomonaco S, Chen Y, Musser SM, Brown EW. Whole genome sequencing uses for foodborne contamination and compliance: Discovery of an emerging contamination event in an ice cream facility using whole genome sequencing. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. PMID 31039448 DOI: 10.1016/J.Meegid.2019.04.026 |
0.436 |
|
| 2019 |
Timme RE, Strain E, Baugher J, Davis S, Gonzalez-Escalona N, Sanchez-Leon M, Allard MW, Brown EW, Tallent S, Rand H. Phylogenomic pipeline validation for foodborne pathogen disease surveillance. Journal of Clinical Microbiology. PMID 30728194 DOI: 10.1128/Jcm.01816-18 |
0.419 |
|
| 2019 |
Timme RE, Sanchez Leon M, Allard MW. Utilizing the Public GenomeTrakr Database for Foodborne Pathogen Traceback. Methods in Molecular Biology (Clifton, N.J.). 1918: 201-212. PMID 30580411 DOI: 10.1007/978-1-4939-9000-9_17 |
0.398 |
|
| 2018 |
Wang YU, Pettengill JB, Pightling A, Timme R, Allard M, Strain E, Rand H. Genetic Diversity of Salmonella and Listeria Isolates from Food Facilities. Journal of Food Protection. 81: 2082-2089. PMID 30485763 DOI: 10.4315/0362-028X.Jfp-18-093 |
0.363 |
|
| 2018 |
Worley J, Meng J, Allard MW, Brown EW, Timme RE. Salmonella enterica Phylogeny Based on Whole-Genome Sequencing Reveals Two New Clades and Novel Patterns of Horizontally Acquired Genetic Elements. Mbio. 9. PMID 30482836 DOI: 10.1128/Mbio.02303-18 |
0.464 |
|
| 2018 |
Timme RE, Rand H, Sanchez Leon M, Hoffmann M, Strain E, Allard M, Roberson D, Baugher JD. GenomeTrakr proficiency testing for foodborne pathogen surveillance: an exercise from 2015. Microbial Genomics. PMID 29906258 DOI: 10.1099/mgen.0.000185 |
0.362 |
|
| 2018 |
Lomonaco S, Crawford MA, Lascols C, Timme RE, Anderson K, Hodge DR, Fisher DJ, Pillai SP, Morse SA, Khan E, Hughes MA, Allard MW, Sharma SK. Resistome of carbapenem- and colistin-resistant Klebsiella pneumoniae clinical isolates. Plos One. 13: e0198526. PMID 29883490 DOI: 10.1371/Journal.Pone.0198526 |
0.335 |
|
| 2017 |
Timme RE, Rand H, Shumway M, Trees EK, Simmons M, Agarwala R, Davis S, Tillman GE, Defibaugh-Chavez S, Carleton HA, Klimke WA, Katz LS. Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance. Peerj. 5: e3893. PMID 29372115 DOI: 10.7717/Peerj.3893 |
0.405 |
|
| 2017 |
Allard MW, Bell R, Ferreira CM, Gonzalez-Escalona N, Hoffmann M, Muruvanda T, Ottesen A, Ramachandran P, Reed E, Sharma S, Stevens E, Timme R, Zheng J, Brown EW. Genomics of foodborne pathogens for microbial food safety. Current Opinion in Biotechnology. 49: 224-229. PMID 29169072 DOI: 10.1016/J.Copbio.2017.11.002 |
0.455 |
|
| 2017 |
Zhang N, Ramachandran P, Wen J, Duke JA, Metzman H, McLaughlin W, Ottesen AR, Timme RE, Handy SM. Development of a Reference Standard Library of Chloroplast Genome Sequences, GenomeTrakrCP. Planta Medica. PMID 28651291 DOI: 10.1055/S-0043-113449 |
0.517 |
|
| 2017 |
Chen Y, Luo Y, Carleton H, Timme R, Melka D, Muruvanda T, Wang C, Kastanis G, Katz LS, Turner L, Fritzinger A, Moore T, Stones R, Blankenship J, Salter M, et al. Whole genome and core genome multilocus sequence typing and single nucleotide polymorphism analyses of Listeria monocytogenes associated with an outbreak linked to cheese, United States, 2013. Applied and Environmental Microbiology. PMID 28550058 DOI: 10.1128/Aem.00633-17 |
0.474 |
|
| 2017 |
Stevens EL, Timme R, Brown EW, Allard MW, Strain E, Bunning K, Musser S. The Public Health Impact of a Publically Available, Environmental Database of Microbial Genomes. Frontiers in Microbiology. 8: 808. PMID 28536563 DOI: 10.3389/Fmicb.2017.00808 |
0.343 |
|
| 2017 |
McTavish EJ, Pettengill J, Davis S, Rand H, Strain E, Allard M, Timme RE. TreeToReads - a pipeline for simulating raw reads from phylogenies. Bmc Bioinformatics. 18: 178. PMID 28320310 DOI: 10.1186/S12859-017-1592-1 |
0.407 |
|
| 2017 |
Zhang N, Erickson DL, Ramachandran P, Ottesen AR, Timme RE, Funk VA, Luo Y, Handy SM. An analysis of Echinacea chloroplast genomes: Implications for future botanical identification. Scientific Reports. 7: 216. PMID 28303008 DOI: 10.1038/S41598-017-00321-6 |
0.45 |
|
| 2017 |
Chen Y, Luo Y, Curry P, Timme R, Melka D, Doyle M, Parish M, Hammack TS, Allard MW, Brown EW, Strain EA. Assessing the genome level diversity of Listeria monocytogenes from contaminated ice cream and environmental samples linked to a listeriosis outbreak in the United States. Plos One. 12: e0171389. PMID 28166293 DOI: 10.1371/Journal.Pone.0171389 |
0.401 |
|
| 2017 |
Chen Y, Luo Y, Pettengill J, Timme R, Melka D, Doyle M, Jackson A, Parish M, Hammack TS, Allard M, Brown EW, Strain EA. Singleton ST382, an emerging clonal group of Listeria monocytogenes associated with three multistate outbreaks linked to contaminated stone fruit, caramel apples and leafy green salad. Journal of Clinical Microbiology. PMID 28053218 DOI: 10.1128/Jcm.02140-16 |
0.43 |
|
| 2016 |
Crawford MA, Timme R, Lomonaco S, Lascols C, Fisher DJ, Sharma SK, Strain E, Allard MW, Brown EW, McFarland MA, Croley T, Hammack TS, Weigel LM, Anderson K, Hodge DR, et al. Genome Sequences of Multidrug-Resistant, Colistin-Susceptible and -Resistant Klebsiella pneumoniae Clinical Isolates from Pakistan. Genome Announcements. 4. PMID 27979956 DOI: 10.1128/Genomea.01419-16 |
0.354 |
|
| 2016 |
Chen Y, Burall LS, Luo Y, Timme R, Melka D, Muruvanda T, Payne J, Wang C, Kastanis G, Maounounen-Laasri A, De Jesus AJ, Curry PE, Stones R, KAluoch O, Liu E, et al. Isolation, enumeration and whole genome sequencing of Listeria monocytogenes in stone fruits linked to a multistate outbreak. Applied and Environmental Microbiology. PMID 27694232 DOI: 10.1128/Aem.01486-16 |
0.427 |
|
| 2016 |
Almeida F, Medeiros MI, Rodrigues DP, Payne J, Timme RE, Allard MW, Falcão JP. Draft Genome Sequences of 40 Salmonella enterica Serovar Typhimurium Strains Isolated from Humans and Food in Brazil. Genome Announcements. 4. PMID 27660768 DOI: 10.1128/Genomea.00892-16 |
0.454 |
|
| 2016 |
Jackson BR, Tarr C, Strain E, Jackson KA, Conrad A, Carleton H, Katz LS, Stroika S, Gould LH, Mody RK, Silk BJ, Beal J, Chen Y, Timme R, Doyle M, et al. Implementation of Nationwide Real-Time Whole-Genome Sequencing to Enhance Listeriosis Outbreak Detection and Investigation. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 27090985 DOI: 10.1093/Cid/Ciw242 |
0.473 |
|
| 2016 |
Allard MW, Strain E, Melka D, Bunning K, Musser SM, Brown EW, Timme R. the PRACTICAL value of Food Pathogen Traceability through BUILDING a Whole-Genome Sequencing Network and database. Journal of Clinical Microbiology. PMID 27008877 DOI: 10.1128/Jcm.00081-16 |
0.376 |
|
| 2016 |
Handy S, Zhang N, Ramachandran P, Luo Y, Timme R, Ottesen A. Development of Sequence Libraries for Generation of DNA-Based ID Methods Planta Medica. 82. DOI: 10.1055/S-0036-1578580 |
0.325 |
|
| 2015 |
Shariat N, Timme RE, Pettengill JB, Barrangou R, Dudley EG. Characterization and evolution of Salmonella CRISPR-Cas systems. Microbiology (Reading, England). 161: 374-386. PMID 28206902 DOI: 10.1099/Mic.0.000005 |
0.322 |
|
| 2015 |
Wang H, Chen Y, Ayers S, Melka D, Laasri A, Payne JS, Zheng J, Son I, Timme R, Kastanis G, Hammack TS, Strain E, Allard MW, Evans PS, Brown EW. Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Give, Isolated from an Imported Chili Powder Product. Genome Announcements. 3. PMID 26139723 DOI: 10.1128/Genomea.00726-15 |
0.491 |
|
| 2015 |
Bjornsdottir-Butler K, McCarthy SA, Dunlap PV, Timme RE, Benner RA. Draft Genome Sequences of Histamine-Producing Photobacterium kishitanii and Photobacterium angustum, Isolated from Albacore (Thunnus alalunga) and Yellowfin (Thunnus albacares) Tuna. Genome Announcements. 3. PMID 25931609 DOI: 10.1128/Genomea.00400-15 |
0.462 |
|
| 2015 |
Pirone-Davies C, Hoffmann M, Roberts RJ, Muruvanda T, Timme RE, Strain E, Luo Y, Payne J, Luong K, Song Y, Tsai YC, Boitano M, Clark TA, Korlach J, Evans PS, et al. Genome-wide methylation patterns in Salmonella enterica Subsp. enterica Serovars. Plos One. 10: e0123639. PMID 25860355 DOI: 10.1371/Journal.Pone.0123639 |
0.387 |
|
| 2015 |
Haendiges J, Timme R, Allard MW, Myers RA, Brown EW, Gonzalez-Escalona N. Characterization of Vibrio parahaemolyticus clinical strains from Maryland (2012-2013) and comparisons to a locally and globally diverse V. parahaemolyticus strains by whole-genome sequence analysis. Frontiers in Microbiology. 6: 125. PMID 25745421 DOI: 10.3389/Fmicb.2015.00125 |
0.431 |
|
| 2014 |
Hoffmann M, Muruvanda T, Pirone C, Korlach J, Timme R, Payne J, Evans P, Meng J, Brown EW, Allard MW. First Fully Closed Genome Sequence of Salmonella enterica subsp. enterica Serovar Cubana Associated with a Food-Borne Outbreak. Genome Announcements. 2. PMID 25359917 DOI: 10.1128/Genomea.01112-14 |
0.486 |
|
| 2014 |
Haendiges J, Timme R, Allard M, Myers RA, Payne J, Brown EW, Evans P, Gonzalez-Escalona N. Draft Genome Sequences of Clinical Vibrio parahaemolyticus Strains Isolated in Maryland (2010 to 2013). Genome Announcements. 2. PMID 25103764 DOI: 10.1128/Genomea.00776-14 |
0.432 |
|
| 2014 |
Pettengill JB, Timme RE, Barrangou R, Toro M, Allard MW, Strain E, Musser SM, Brown EW. The evolutionary history and diagnostic utility of the CRISPR-Cas system within Salmonella enterica ssp. enterica. Peerj. 2: e340. PMID 24765574 DOI: 10.7717/Peerj.340 |
0.448 |
|
| 2014 |
Hoffmann M, Muruvanda T, Allard MW, Korlach J, Roberts RJ, Timme R, Payne J, McDermott PF, Evans P, Meng J, Brown EW, Zhao S. Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5- Strain Isolated from Chicken Breast. Genome Announcements. 2. PMID 24699967 DOI: 10.1128/genomeA.00294-14 |
0.314 |
|
| 2014 |
Allard MW, Muruvanda T, Strain E, Timme R, Luo Y, Wang C, Keys CE, Payne J, Cooper T, Luong K, Song Y, Chin CS, Korlach J, Roberts RJ, Evans P, et al. Fully Assembled Genome Sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992. Genome Announcements. 2. PMID 24699966 DOI: 10.1128/genomeA.00293-14 |
0.375 |
|
| 2014 |
Gonzalez-Escalona N, Timme R, Raphael BH, Zink D, Sharma SK. Whole-genome single-nucleotide-polymorphism analysis for discrimination of Clostridium botulinum group I strains. Applied and Environmental Microbiology. 80: 2125-32. PMID 24463972 DOI: 10.1128/Aem.03934-13 |
0.368 |
|
| 2013 |
Hoffmann M, Muruvanda T, Allard MW, Korlach J, Roberts RJ, Timme R, Payne J, McDermott PF, Evans P, Meng J, Brown EW, Zhao S. Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5- Strain Isolated from Chicken Breast. Genome Announcements. 1. PMID 24356834 DOI: 10.1128/Genomea.01068-13 |
0.444 |
|
| 2013 |
Timme RE, Pettengill JB, Allard MW, Strain E, Barrangou R, Wehnes C, Van Kessel JS, Karns JS, Musser SM, Brown EW. Phylogenetic diversity of the enteric pathogen Salmonella enterica subsp. enterica inferred from genome-wide reference-free SNP characters. Genome Biology and Evolution. 5: 2109-23. PMID 24158624 DOI: 10.1093/Gbe/Evt159 |
0.473 |
|
| 2013 |
Cao G, Ju W, Rump L, Zhao S, Zou L, Wang C, Strain E, Luo Y, Timme R, Allard M, Brown E, Meng J. Genome Sequences of Two Emerging Non-O157 Shiga Toxin-Producing Escherichia coli Strains. Genome Announcements. 1. PMID 23682138 DOI: 10.1128/Genomea.00200-13 |
0.39 |
|
| 2013 |
Allard MW, Muruvanda T, Strain E, Timme R, Luo Y, Wang C, Keys CE, Payne J, Cooper T, Luong K, Song Y, Chin CS, Korlach J, Roberts RJ, Evans P, et al. Fully assembled genome sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992. Genome Announcements. 1: e0008113. PMID 23516208 DOI: 10.1128/Genomea.00081-13 |
0.48 |
|
| 2013 |
Basavanna U, Gonzalez-Escalona N, Timme R, Datta S, Schoen B, Brown EW, Zink D, Sharma SK. Draft Genome Sequence of a Clostridium botulinum Isolate from Water Used for Cooling at a Plant Producing Low-Acid Canned Foods. Genome Announcements. 1. PMID 23409268 DOI: 10.1128/Genomea.00200-12 |
0.475 |
|
| 2013 |
Hoffmann M, Luo Y, Lafon PC, Timme R, Allard MW, McDermott PF, Brown EW, Zhao S. Genome Sequences of Salmonella enterica Serovar Heidelberg Isolates Isolated in the United States from a Multistate Outbreak of Human Salmonella Infections. Genome Announcements. 1. PMID 23405335 DOI: 10.1128/Genomea.00004-12 |
0.405 |
|
| 2013 |
Allard MW, Luo Y, Strain E, Pettengill J, Timme R, Wang C, Li C, Keys CE, Zheng J, Stones R, Wilson MR, Musser SM, Brown EW. On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004. Plos One. 8: e55254. PMID 23383127 DOI: 10.1371/Journal.Pone.0055254 |
0.432 |
|
| 2012 |
Ju W, Cao G, Rump L, Strain E, Luo Y, Timme R, Allard M, Zhao S, Brown E, Meng J. Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing. Journal of Clinical Microbiology. 50: 4123-7. PMID 23052305 DOI: 10.1128/Jcm.02262-12 |
0.315 |
|
| 2012 |
Finet C, Timme RE, Delwiche CF, Marletaz F. Erratum: Multigene phylogeny of the green lineage reveals the origin and diversification of land plants. Current Biology : Cb. 22: 1456-7. PMID 23050273 DOI: 10.1016/j.cub.2012.07.021 |
0.592 |
|
| 2012 |
Timme RE, Allard MW, Luo Y, Strain E, Pettengill J, Wang C, Li C, Keys CE, Zheng J, Stones R, Wilson MR, Musser SM, Brown EW. Draft genome sequences of 21 Salmonella enterica serovar enteritidis strains. Journal of Bacteriology. 194: 5994-5. PMID 23045502 DOI: 10.1128/Jb.01289-12 |
0.476 |
|
| 2012 |
Cao G, Zhao S, Strain E, Luo Y, Timme R, Wang C, Brown E, Meng J, Allard M. Draft genome sequences of eight Salmonella enterica serotype newport strains from diverse hosts and locations. Journal of Bacteriology. 194: 5146. PMID 22933769 DOI: 10.1128/Jb.01171-12 |
0.457 |
|
| 2012 |
Delaux PM, Xie X, Timme RE, Puech-Pages V, Dunand C, Lecompte E, Delwiche CF, Yoneyama K, Bécard G, Séjalon-Delmas N. Origin of strigolactones in the green lineage. The New Phytologist. 195: 857-71. PMID 22738134 DOI: 10.1111/J.1469-8137.2012.04209.X |
0.637 |
|
| 2012 |
Timme RE, Bachvaroff TR, Delwiche CF. Broad phylogenomic sampling and the sister lineage of land plants. Plos One. 7: e29696. PMID 22253761 DOI: 10.1371/Journal.Pone.0029696 |
0.635 |
|
| 2011 |
Delwiche CF, Timme RE. Plants. Current Biology : Cb. 21: R417-22. PMID 21640897 DOI: 10.1016/j.cub.2011.04.021 |
0.551 |
|
| 2011 |
De Smet I, Voss U, Lau S, Wilson M, Shao N, Timme RE, Swarup R, Kerr I, Hodgman C, Bock R, Bennett M, Jürgens G, Beeckman T. Unraveling the evolution of auxin signaling. Plant Physiology. 155: 209-21. PMID 21081694 DOI: 10.1104/Pp.110.168161 |
0.457 |
|
| 2010 |
Finet C, Timme RE, Delwiche CF, Marlétaz F. Multigene phylogeny of the green lineage reveals the origin and diversification of land plants. Current Biology : Cb. 20: 2217-22. PMID 21145743 DOI: 10.1016/J.Cub.2010.11.035 |
0.641 |
|
| 2010 |
Timme RE, Delwiche CF. Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra (Zygnematales) transcriptomes. Bmc Plant Biology. 10: 96. PMID 20500869 DOI: 10.1186/1471-2229-10-96 |
0.696 |
|
| 2009 |
Handy SM, Bachvaroff TR, Timme RE, Wayne Coats D, Kim S, Delwiche CF. PHYLOGENY OF FOUR DINOPHYSIACEAN GENERA (DINOPHYCEAE, DINOPHYSIALES) BASED ON rDNA SEQUENCES FROM SINGLE CELLS AND ENVIRONMENTAL SAMPLES(1). Journal of Phycology. 45: 1163-74. PMID 27032361 DOI: 10.1111/J.1529-8817.2009.00738.X |
0.634 |
|
| 2009 |
Handy SM, Bachvaroff TR, Timme RE, Wayne Coats D, Kim S, Delwiche CF. Phylogeny of four dinophysiacean genera (DINOPHYCEAE,DINOPHYSIALES) based on rdna sequences from single cells and environmental samples Journal of Phycology. 45: 1163-1174. DOI: 10.1111/j.1529-8817.2009.00738.x |
0.578 |
|
| 2007 |
Timme RE, Kuehl JV, Boore JL, Jansen RK. A comparative analysis of the Lactuca and Helianthus (Asteraceae) plastid genomes: identification of divergent regions and categorization of shared repeats. American Journal of Botany. 94: 302-12. PMID 21636403 DOI: 10.3732/Ajb.94.3.302 |
0.528 |
|
| 2007 |
Timme RE, Simpson BB, Linder CR. High-resolution phylogeny for Helianthus (Asteraceae) using the 18S-26S ribosomal DNA external transcribed spacer. American Journal of Botany. 94: 1837-52. PMID 21636379 DOI: 10.3732/Ajb.94.11.1837 |
0.324 |
|
| 2006 |
Timme RE, Kuehl JV, Boore JL, Jansen RK. A Comparison of the First Two Sequenced Chloroplast Genomes in Asteraceae: Lettuce and Sunflower Lawrence Berkeley National Laboratory. DOI: 10.2172/960402 |
0.403 |
|
| 2004 |
Xu W, Briggs WJ, Padolina J, Timme RE, Liu W, Linder CR, Miranker DP. Using MoBIoS' scalable genome join to find conserved primer pair candidates between two genomes. Bioinformatics (Oxford, England). 20: i355-62. PMID 15262820 DOI: 10.1093/bioinformatics/bth929 |
0.328 |
|
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