Jan Koster - Publications

Affiliations: 
1985-2010 Department of Linguistics University of Groningen, Groningen, Netherlands 
Website:
http://www.let.rug.nl/koster/

150 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 van Gerven MR, Schild L, van Arkel J, Koopmans B, Broeils LA, Meijs LAM, van Oosterhout R, van Noesel MM, Koster J, van Hooff SR, Molenaar JJ, van den Boogaard ML. Two opposing gene expression patterns within ATRX aberrant neuroblastoma. Plos One. 18: e0289084. PMID 37540673 DOI: 10.1371/journal.pone.0289084  0.306
2023 Okonechnikov K, Federico A, Schrimpf D, Sievers P, Sahm F, Koster J, Jones DTW, von Deimling A, Pfister SM, Kool M, Korshunov A. Comparison of transcriptome profiles between medulloblastoma primary and recurrent tumors uncovers novel variance effects in relapses. Acta Neuropathologica Communications. 11: 7. PMID 36635768 DOI: 10.1186/s40478-023-01504-1  0.331
2021 Westerhout EM, Hamdi M, Stroeken P, Nowakowska NE, Lakeman A, van Arkel J, Hasselt NE, Bleijlevens B, Akogul N, Haneveld F, Chan A, van Sluis P, Zwijnenburg D, Volckmann R, van Noesel CJ, ... Koster J, et al. Mesenchymal type neuroblastoma cells escape ALK inhibitors. Cancer Research. PMID 34853072 DOI: 10.1158/0008-5472.CAN-21-1621  0.313
2020 Bruggeman JW, Irie N, Lodder P, van Pelt AMM, Koster J, Hamer G. Tumors Widely Express Hundreds of Embryonic Germline Genes. Cancers. 12. PMID 33348709 DOI: 10.3390/cancers12123812  0.309
2020 Meel MH, de Gooijer MC, Metselaar DS, Sewing ACP, Zwaan K, Waranecki P, Breur M, Buil LCM, Lagerweij T, Wedekind LE, Twisk JWR, Koster J, Hashizume R, Raabe EH, Montero-Carcaboso A, et al. Combined therapy of AXL and HDAC inhibition reverses mesenchymal transition in diffuse intrinsic pontine glioma. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 32165429 DOI: 10.1158/1078-0432.Ccr-19-3538  0.343
2020 Dijk F, Veenstra VL, Soer EC, Dings MPG, Zhao L, Halfwerk JB, Hooijer GK, Damhofer H, Marzano M, Steins A, Waasdorp C, Busch OR, Besselink MG, Tol JA, Welling L, ... Koster J, et al. Unsupervised class discovery in pancreatic ductal adenocarcinoma reveals cell-intrinsic mesenchymal features and high concordance between existing classification systems. Scientific Reports. 10: 337. PMID 31941932 DOI: 10.1038/S41598-019-56826-9  0.38
2019 Nederlof I, De Bortoli D, Bareche Y, Nguyen B, de Maaker M, Hooijer GKJ, Buisseret L, Kok M, Smid M, Van den Eynden GGGM, Brinkman AB, Hudecek J, Koster J, Sotiriou C, Larsimont D, et al. Comprehensive evaluation of methods to assess overall and cell-specific immune infiltrates in breast cancer. Breast Cancer Research : Bcr. 21: 151. PMID 31878981 DOI: 10.1186/S13058-019-1239-4  0.316
2019 Lambo S, Gröbner SN, Rausch T, Waszak SM, Schmidt C, Gorthi A, Romero JC, Mauermann M, Brabetz S, Krausert S, Buchhalter I, Koster J, Zwijnenburg DA, Sill M, Hübner JM, et al. The molecular landscape of ETMR at diagnosis and relapse. Nature. PMID 31802000 DOI: 10.1038/S41586-019-1815-X  0.321
2019 Metselaar DS, Meel MH, Benedict B, Waranecki P, Koster J, Kaspers GJL, Hulleman E. Celastrol-induced degradation of FANCD2 sensitizes pediatric high-grade gliomas to the DNA-crosslinking agent carboplatin. Ebiomedicine. PMID 31735550 DOI: 10.1016/J.Ebiom.2019.10.062  0.307
2019 Avitabile M, Succoio M, Testori A, Cardinale A, Vaksman Z, Lasorsa VA, Cantalupo S, Esposito M, Cimmino F, Montella A, Formicola D, Koster J, Andreotti V, Ghiorzo P, Romano MF, et al. Neural crest-derived tumor neuroblastoma and melanoma share 1p13.2 as susceptibility locus that shows a long-range interaction with the SLC16A1 gene. Carcinogenesis. PMID 31605138 DOI: 10.1093/Carcin/Bgz153  0.397
2019 Meel MH, Guillén Navarro M, de Gooijer MC, Metselaar DS, Waranecki P, Breur M, Lagerweij T, Wedekind LE, Koster J, van de Wetering MD, Schouten-van Meeteren N, Aronica E, van Tellingen O, Bugiani M, Phoenix TN, et al. MEK/MELK inhibition and blood-brain barrier-deficiencies in atypical teratoid/rhabdoid tumors. Neuro-Oncology. PMID 31504799 DOI: 10.1093/Neuonc/Noz151  0.362
2019 Lange I, Koster J, Koomoa DT. Calcium signaling regulates fundamental processes involved in Neuroblastoma progression. Cell Calcium. 82: 102052. PMID 31306997 DOI: 10.1016/J.Ceca.2019.06.006  0.333
2019 Georgescu C, Corbin JM, Thibivilliers S, Webb ZD, Zhao YD, Koster J, Fung KM, Asch AS, Wren JD, Ruiz-Echevarría MJ. A TMEFF2-regulated cell cycle derived gene signature is prognostic of recurrence risk in prostate cancer. Bmc Cancer. 19: 423. PMID 31060542 DOI: 10.1186/S12885-019-5592-6  0.355
2019 Koster J, Plasterk RHA. A library of Neo Open Reading Frame peptides (NOPs) as a sustainable resource of common neoantigens in up to 50% of cancer patients. Scientific Reports. 9: 6577. PMID 31036835 DOI: 10.1038/S41598-019-42729-2  0.322
2019 Savci-Heijink CD, Halfwerk H, Koster J, Horlings HM, Vijver MJvd. A specific gene expression signature for visceral organ metastasis in breast cancer Bmc Cancer. 19: 333. PMID 30961553 DOI: 10.1186/S12885-019-5554-Z  0.323
2019 van Groningen T, Akogul N, Westerhout EM, Chan A, Hasselt NE, Zwijnenburg DA, Broekmans M, Stroeken P, Haneveld F, Hooijer GKJ, Savci-Heijink CD, Lakeman A, Volckmann R, van Sluis P, Valentijn LJ, Koster J, et al. A NOTCH feed-forward loop drives reprogramming from adrenergic to mesenchymal state in neuroblastoma. Nature Communications. 10: 1530. PMID 30948783 DOI: 10.1038/S41467-019-09470-W  0.343
2019 Karpus ON, Westendorp BF, Vermeulen JLM, Meisner S, Koster J, Muncan V, Wildenberg ME, van den Brink GR. Colonic CD90+ Crypt Fibroblasts Secrete Semaphorins to Support Epithelial Growth. Cell Reports. 26: 3698-3708.e5. PMID 30917322 DOI: 10.1016/J.Celrep.2019.02.101  0.31
2019 Herold S, Kalb J, Büchel G, Ade CP, Baluapuri A, Xu J, Koster J, Solvie D, Carstensen A, Klotz C, Rodewald S, Schülein-Völk C, Dobbelstein M, Wolf E, Molenaar J, et al. Recruitment of BRCA1 limits MYCN-driven accumulation of stalled RNA polymerase. Nature. PMID 30894746 DOI: 10.1038/S41586-019-1030-9  0.352
2019 Savci-Heijink CD, Halfwerk H, Hooijer GKJ, Koster J, Horlings HM, Meijer SL, Vijver MJvd. Epithelial-to-mesenchymal transition status of primary breast carcinomas and its correlation with metastatic behavior. Breast Cancer Research and Treatment. 174: 649-659. PMID 30610490 DOI: 10.1007/S10549-018-05089-5  0.393
2019 Versteeg R, Valentijn L, Koster J, Groningen Tv, Hamdi M, Westerhout E, Nes Jv. Abstract SY24-02: Neuroblastoma: A developmental twist Cancer Research. 79. DOI: 10.1158/1538-7445.Sabcs18-Sy24-02  0.422
2019 Corbin JM, Georgescu C, Thibivilliers S, Webb Z, Zhao Y, Koster J, Fung K, Asch A, Wren J, Ruiz-Echevarria M. Abstract 3152: A tumor suppressor-regulated cell cycle derived gene signature is prognostic of recurrence risk in prostate cancer Cancer Research. 79: 3152-3152. DOI: 10.1158/1538-7445.Sabcs18-3152  0.396
2019 Nes Jv, Groningen Tv, Valentijn L, Zwijnenburg D, Westerhout EM, Hamdi M, Koster J, Versteeg R. Abstract 3662: Plasticity of transcriptional and epigenetic cellular states in neuroblastoma is driven by core lineage transcription factors Cancer Research. 79: 3662-3662. DOI: 10.1158/1538-7445.Am2019-3662  0.439
2019 Koster J, Volckmann R, Zwijnenburg D, Molenaar P, Versteeg R. Abstract 2490: R2: Genomics analysis and visualization platform Cancer Research. 79: 2490-2490. DOI: 10.1158/1538-7445.Am2019-2490  0.31
2018 Van den Eynden J, Umapathy G, Ashouri A, Cervantes-Madrid D, Szydzik J, Ruuth K, Koster J, Larsson E, Guan J, Palmer RH, Hallberg B. Phosphoproteome and gene expression profiling of ALK inhibition in neuroblastoma cell lines reveals conserved oncogenic pathways. Science Signaling. 11. PMID 30459281 DOI: 10.1126/Scisignal.Aar5680  0.381
2018 Depuydt P, Koster J, Boeva V, Hocking TD, Speleman F, Schleiermacher G, De Preter K. Meta-mining of copy number profiles of high-risk neuroblastoma tumors. Scientific Data. 5: 180240. PMID 30375995 DOI: 10.1038/Sdata.2018.240  0.348
2018 Brabetz S, Leary SES, Gröbner SN, Nakamoto MW, Şeker-Cin H, Girard EJ, Cole B, Strand AD, Bloom KL, Hovestadt V, Mack NL, Pakiam F, Schwalm B, Korshunov A, Balasubramanian GP, ... Koster J, et al. A biobank of patient-derived pediatric brain tumor models. Nature Medicine. PMID 30349086 DOI: 10.1038/S41591-018-0207-3  0.406
2018 Braekeveldt N, von Stedingk K, Fransson S, Martinez-Monleon A, Lindgren D, Axelson H, Levander F, Willforss J, Hansson K, Øra I, Backman T, Börjesson A, Beckman S, Esfandyari J, Berbegall AP, ... Koster J, et al. Patient-derived xenograft models reveal intratumor heterogeneity and temporal stability in neuroblastoma. Cancer Research. PMID 30154149 DOI: 10.1158/0008-5472.Can-18-0527  0.358
2018 Cimmino F, Avitabile M, Diskin SJ, Vaksman Z, Pignataro P, Formicola D, Cardinale A, Testori A, Koster J, de Torres C, Devoto M, Maris JM, Iolascon A, Capasso M. Fine mapping of 2q35 high-risk neuroblastoma locus reveals independent functional risk variants and suggests full-length BARD1 as tumor-suppressor. International Journal of Cancer. PMID 30132831 DOI: 10.1002/Ijc.31822  0.321
2018 Eleveld TF, Schild L, Koster J, Zwijnenburg DA, Alles LK, Ebus ME, Volckmann R, Tytgat GAM, van Sluis P, Versteeg R, Molenaar JJ. RAS-MAPK pathway-driven tumor progression is associated with loss of CIC and other genomic aberrations in neuroblastoma. Cancer Research. PMID 30115695 DOI: 10.1158/0008-5472.Can-18-1045  0.35
2018 Meel MH, de Gooijer MC, Guillén Navarro M, Waranecki P, Breur M, Buil L, Wedekind LE, Twisk JWR, Koster J, Hashizume R, Raabe EH, Montero Carcaboso A, Bugiani M, van Tellingen O, van Vuurden DG, et al. MELK inhibition in Diffuse Intrinsic Pontine Glioma. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30061363 DOI: 10.1158/1078-0432.Ccr-18-0924  0.301
2018 Bruggeman JW, Koster J, Lodder P, Repping S, Hamer G. Massive expression of germ cell-specific genes is a hallmark of cancer and a potential target for novel treatment development. Oncogene. PMID 29907769 DOI: 10.1038/S41388-018-0357-2  0.425
2018 Agarwal S, Milazzo G, Rajapakshe K, Bernardi R, Chen Z, Barberi E, Koster J, Perini G, Coarfa C, Shohet JM. MYCN acts as a direct co-regulator of p53 in MYCN amplified neuroblastoma. Oncotarget. 9: 20323-20338. PMID 29755654 DOI: 10.18632/Oncotarget.24859  0.337
2018 Ménard M, Costechareyre C, Ichim G, Blachier J, Neves D, Jarrosson-Wuilleme L, Depping R, Koster J, Saintigny P, Mehlen P, Tauszig-Delamasure S. Hey1- and p53-dependent TrkC proapoptotic activity controls neuroblastoma growth. Plos Biology. 16: e2002912. PMID 29750782 DOI: 10.1371/Journal.Pbio.2002912  0.357
2018 Trumpi K, Frenkel N, Peters T, Korthagen NM, Jongen JMJ, Raats D, van Grevenstein H, Backes Y, Moons LM, Lacle MM, Koster J, Zwijnenburg D, Borel Rinkes IHM, Kranenburg O. Macrophages induce "budding" in aggressive human colon cancer subtypes by protease-mediated disruption of tight junctions. Oncotarget. 9: 19490-19507. PMID 29731961 DOI: 10.18632/Oncotarget.24626  0.41
2018 Rajbhandari P, Lopez G, Capdevila C, Salvatori B, Yu J, Rodriguez-Barrueco R, Martinez D, Yarmarkovich M, Weichert-Leahey N, Abraham BJ, Alvarez MJ, Iyer A, Harenza JL, Oldridge D, De Preter K, Koster J, et al. Cross-cohort analysis identifies a TEAD4 ↔ MYCN positive-feedback loop as the core regulatory element of high-risk neuroblastoma. Cancer Discovery. PMID 29510988 DOI: 10.1158/2159-8290.Cd-16-0861  0.367
2018 Gröbner SN, Worst BC, Weischenfeldt J, Buchhalter I, Kleinheinz K, Rudneva VA, Johann PD, Balasubramanian GP, Segura-Wang M, Brabetz S, Bender S, Hutter B, Sturm D, Pfaff E, Hübschmann D, ... Koster J, et al. The landscape of genomic alterations across childhood cancers. Nature. PMID 29489754 DOI: 10.1038/Nature25480  0.323
2018 Groß AS, Schulz C, Kolb J, Koster J, Wehner S, Czaplinski S, Khilan A, Rohrer H, Harter PN, Klingebiel T, Langer JD, Geerts D, Schulte D. Tumorigenic and anti-proliferative properties of the TALE-transcription factors MEIS2D and MEIS2A in neuroblastoma. Cancer Research. PMID 29382709 DOI: 10.1158/0008-5472.Can-17-1860  0.437
2018 Schultz CR, Geerts D, Mooney M, El-Khawaja R, Koster J, Bachmann AS. Synergistic drug combination GC7/DFMO suppresses hypusine/spermidine-dependent eIF5A activation and induces apoptotic cell death in neuroblastoma. The Biochemical Journal. PMID 29295892 DOI: 10.1042/Bcj20170597  0.346
2018 Versteeg R, Groningen Tv, Koster J, Valentijn LJ, Nes Jv. Abstract IA10: Neuroblastoma is a biphasic tumor Cancer Research. 78. DOI: 10.1158/1538-7445.Pedca17-Ia10  0.419
2018 Brabetz S, Groebner SN, Jaeger N, Milde T, Ecker J, Selt F, Witt O, Rusert JM, Koster J, Leary SE, Li X, Wechsler-Reya RJ, Olson JM, Pfister SM, Kool M. PCLN-05. A BIOBANK OF PATIENT-DERIVED MOLECULARLY CHARACTERIZED ORTHOTOPIC PEDIATRIC BRAIN TUMOR MODELS FOR PRECLINICAL RESEARCH Neuro-Oncology. 20: i155-i155. DOI: 10.1093/Neuonc/Noy059.574  0.3
2017 Savci-Heijink CD, Halfwerk H, Koster J, Van de Vijver MJ. Association between gene expression profile of the primary tumor and chemotherapy response of metastatic breast cancer. Bmc Cancer. 17: 755. PMID 29132326 DOI: 10.1186/S12885-017-3691-9  0.352
2017 Russo R, Cimmino F, Pezone L, Manna F, Avitabile M, Langella C, Koster J, Casale F, Raia M, Viola G, Fischer M, Iolascon A, Capasso M. Kinome expression profiling of human neuroblastoma tumors identifies potential drug targets for ultra high-risk patients. Carcinogenesis. PMID 28968651 DOI: 10.1093/Carcin/Bgx077  0.382
2017 Meel MH, Sewing ACP, Waranecki P, Metselaar DS, Wedekind LE, Koster J, van Vuurden DG, Kaspers GJL, Hulleman E. Culture methods of diffuse intrinsic pontine glioma cells determine response to targeted therapies. Experimental Cell Research. PMID 28947132 DOI: 10.1016/J.Yexcr.2017.09.032  0.321
2017 Northcott PA, Buchhalter I, Morrissy AS, Hovestadt V, Weischenfeldt J, Ehrenberger T, Gröbner S, Segura-Wang M, Zichner T, Rudneva VA, Warnatz HJ, Sidiropoulos N, Phillips AH, Schumacher S, Kleinheinz K, ... Koster J, et al. The whole-genome landscape of medulloblastoma subtypes. Nature. 547: 311-317. PMID 28726821 DOI: 10.1038/Nature22973  0.371
2017 van Groningen T, Koster J, Valentijn LJ, Zwijnenburg DA, Akogul N, Hasselt NE, Broekmans M, Haneveld F, Nowakowska NE, Bras J, van Noesel CJM, Jongejan A, van Kampen AH, Koster L, Baas F, et al. Neuroblastoma is composed of two super-enhancer-associated differentiation states. Nature Genetics. PMID 28650485 DOI: 10.1038/Ng.3899  0.432
2017 Bate-Eya LT, Gierman HJ, Ebus ME, Koster J, Caron HN, Versteeg R, Dolman ME, Molenaar JJ. Enhancer of zeste homologue 2 plays an important role in neuroblastoma cell survival independent of its histone methyltransferase activity. European Journal of Cancer (Oxford, England : 1990). 75: 63-72. PMID 28214660 DOI: 10.1016/J.Ejca.2016.12.019  0.387
2017 Hakkert A, Ebus ME, Versteeg R, Huib CN, Koster J, Molenaar JJ. Abstract A26: High frequency of Cytosine to Adenine mutations in neuroblastoma correlates with genomic aberrations in 8-Oxo-Guanine repair pathway Molecular Cancer Research. 15. DOI: 10.1158/1557-3125.Dnarepair16-A26  0.368
2017 Nes Jv, Groningen Tv, Valentijn LJ, Zwijnenburg D, Molenaar JJ, Westerman BA, Westerhout EM, Hamdi M, Tytgat GA, Koster J, Versteeg R. Abstract 3876: Active enhancers delineate intra-tumor heterogeneity of developmental states in neuroblastoma Cancer Research. 77: 3876-3876. DOI: 10.1158/1538-7445.Am2017-3876  0.322
2016 Vella S, Tavanti E, Hattinger CM, Fanelli M, Versteeg R, Koster J, Picci P, Serra M. Targeting CDKs with Roscovitine Increases Sensitivity to DNA Damaging Drugs of Human Osteosarcoma Cells. Plos One. 11: e0166233. PMID 27898692 DOI: 10.1371/Journal.Pone.0166233  0.336
2016 Matas-Rico E, van Veen M, Leyton-Puig D, van den Berg J, Koster J, Kedziora KM, Molenaar B, Weerts MJ, de Rink I, Medema RH, Giepmans BN, Perrakis A, Jalink K, Versteeg R, Moolenaar WH. Glycerophosphodiesterase GDE2 Promotes Neuroblastoma Differentiation through Glypican Release and Is a Marker of Clinical Outcome. Cancer Cell. PMID 27693046 DOI: 10.1016/J.Ccell.2016.08.016  0.379
2016 Fabian J, Opitz D, Althoff K, Lodrini M, Hero B, Volland R, Beckers A, Preter K, Decock A, Patil N, Abba M, Kopp-Schneider A, Astrahantseff K, Wünschel J, Pfeil S, ... Koster J, et al. MYCN and HDAC5 transcriptionally repress CD9 to trigger invasion and metastasis in neuroblastoma. Oncotarget. PMID 27572323 DOI: 10.18632/Oncotarget.11662  0.339
2016 Eberhardt A, Hansen JN, Koster J, Lotta LT, Wang S, Livingstone E, Qian K, Valentijn LJ, Zheng YG, Schor NF, Li X. Protein arginine methyltransferase 1 is a novel regulator of MYCN in neuroblastoma. Oncotarget. PMID 27571165 DOI: 10.18632/Oncotarget.11556  0.391
2016 Middelbeek J, Vrenken K, Visser D, Lasonder E, Koster J, Jalink K, Clark K, van Leeuwen FN. The TRPM7 interactome defines a cytoskeletal complex linked to neuroblastoma progression. European Journal of Cell Biology. PMID 27402209 DOI: 10.1016/J.Ejcb.2016.06.008  0.41
2016 Bate-Eya LT, den Hartog IJ, van der Ploeg I, Schild L, Koster J, Santo EE, Westerhout EM, Versteeg R, Caron HN, Molenaar JJ, Dolman ME. High efficacy of the BCL-2 inhibitor ABT199 (venetoclax) in BCL-2 high-expressing neuroblastoma cell lines and xenografts and rational for combination with MCL-1 inhibition. Oncotarget. PMID 27056887 DOI: 10.18632/Oncotarget.8547  0.354
2016 Vellinga TT, den Uil S, Rinkes IH, Marvin D, Ponsioen B, Alvarez-Varela A, Fatrai S, Scheele C, Zwijnenburg DA, Snippert H, Vermeulen L, Medema JP, Stockmann HB, Koster J, Fijneman RJ, et al. Collagen-rich stroma in aggressive colon tumors induces mesenchymal gene expression and tumor cell invasion. Oncogene. PMID 26996663 DOI: 10.1038/Onc.2016.60  0.45
2016 Savci-Heijink CD, Halfwerk H, Koster J, van de Vijver MJ. A novel gene expression signature for bone metastasis in breast carcinomas. Breast Cancer Research and Treatment. 156: 249-59. PMID 26965286 DOI: 10.1007/S10549-016-3741-Z  0.326
2016 Johann PD, Erkek S, Zapatka M, Kerl K, Buchhalter I, Hovestadt V, Jones DT, Sturm D, Hermann C, Segura Wang M, Korshunov A, Rhyzova M, Gröbner S, Brabetz S, Chavez L, ... Koster J, et al. Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. PMID 26923874 DOI: 10.1016/J.Ccell.2016.02.001  0.392
2016 Sturm D, Orr BA, Toprak UH, Hovestadt V, Jones DT, Capper D, Sill M, Buchhalter I, Northcott PA, Leis I, Ryzhova M, Koelsche C, Pfaff E, Allen SJ, Balasubramanian G, ... Koster J, et al. New Brain Tumor Entities Emerge from Molecular Classification of CNS-PNETs. Cell. 164: 1060-1072. PMID 26919435 DOI: 10.1016/J.Cell.2016.01.015  0.362
2016 Versteeg R, Groningen Tv, Westerman BA, Molenaar JJ, Westerhout EM, Hamdi M, Tytgat GA, Koster J, Nes Jv. Abstract PR08: Neuroblastoma is biphasic and includes classical neuroepithelial cells and chemoresistant mesenchymal cells Cancer Research. 76. DOI: 10.1158/1538-7445.Pedca15-Pr08  0.449
2016 Koster J, Valentijn LJ, Zwijnenburg DA, Hasselt NE, Sluis PGv, Noesel MMv, George RE, Tytgat GA, Molenaar JJ, Versteeg R. Abstract PR06: TERT rearrangements are frequent in neuroblastoma and identify aggressive tumors Cancer Research. 76. DOI: 10.1158/1538-7445.Pedca15-Pr06  0.431
2016 Bate-Eya LT, Hartog IJMd, Ploeg Ivd, Schild L, Koster J, Versteeg R, Caron HN, Molenaar JJ, Dolman MEM. Abstract B09: MCL-1 inhibition improves ABT199 efficacy for BCL-2-dependent neuroblastoma Cancer Research. 76. DOI: 10.1158/1538-7445.Pedca15-B09  0.385
2016 Versteeg R, Groningen Tv, Valentijn LJ, Westerman BA, Molenaar JJ, Westerhout EM, Hamdi M, Tytgat GA, Koster J, JvN. Abstract 2453: Neuroblastoma is bi-phasic and includes classical neuro-epithelial cells and chemo-resistant mesenchymal cells Cancer Research. 76: 2453-2453. DOI: 10.1158/1538-7445.Am2016-2453  0.423
2015 Dolman ME, van der Ploeg I, Koster J, Bate-Eya LT, Versteeg R, Caron HN, Molenaar JJ. DNA-Dependent Protein Kinase As Molecular Target for Radiosensitization of Neuroblastoma Cells. Plos One. 10: e0145744. PMID 26716839 DOI: 10.1371/Journal.Pone.0145744  0.344
2015 Best MG, Sol N, Kooi I, Tannous J, Westerman BA, Rustenburg F, Schellen P, Verschueren H, Post E, Koster J, Ylstra B, Ameziane N, Dorsman J, Smit EF, Verheul HM, et al. RNA-Seq of Tumor-Educated Platelets Enables Blood-Based Pan-Cancer, Multiclass, and Molecular Pathway Cancer Diagnostics. Cancer Cell. 28: 666-76. PMID 26525104 DOI: 10.1016/J.Ccell.2015.09.018  0.352
2015 Valentijn LJ, Koster J, Zwijnenburg DA, Hasselt NE, van Sluis P, Volckmann R, van Noesel MM, George RE, Tytgat GA, Molenaar JJ, Versteeg R. TERT rearrangements are frequent in neuroblastoma and identify aggressive tumors. Nature Genetics. PMID 26523776 DOI: 10.1038/Ng.3438  0.354
2015 Eleveld TF, Oldridge DA, Bernard V, Koster J, Daage LC, Diskin SJ, Schild L, Bentahar NB, Bellini A, Chicard M, Lapouble E, Combaret V, Legoix-Né P, Michon J, Pugh TJ, et al. Relapsed neuroblastomas show frequent RAS-MAPK pathway mutations. Nature Genetics. PMID 26121087 DOI: 10.1038/Ng.3333  0.363
2015 Yco LP, Geerts D, Mocz G, Koster J, Bachmann AS. Effect of sulfasalazine on human neuroblastoma: analysis of sepiapterin reductase (SPR) as a new therapeutic target. Bmc Cancer. 15: 477. PMID 26093909 DOI: 10.1186/S12885-015-1447-Y  0.385
2015 Mandriota SJ, Valentijn LJ, Lesne L, Betts DR, Marino D, Boudal-Khoshbeen M, London WB, Rougemont AL, Attiyeh EF, Maris JM, Hogarty MD, Koster J, Molenaar JJ, Versteeg R, Ansari M, et al. Ataxia-telangiectasia mutated (ATM) silencing promotes neuroblastoma progression through a MYCN independent mechanism. Oncotarget. 6: 18558-76. PMID 26053094 DOI: 10.18632/Oncotarget.4061  0.366
2015 Pajtler KW, Witt H, Sill M, Jones DT, Hovestadt V, Kratochwil F, Wani K, Tatevossian R, Punchihewa C, Johann P, Reimand J, Warnatz HJ, Ryzhova M, Mack S, Ramaswamy V, ... Koster J, et al. Molecular Classification of Ependymal Tumors across All CNS Compartments, Histopathological Grades, and Age Groups. Cancer Cell. 27: 728-43. PMID 25965575 DOI: 10.1016/J.Ccell.2015.04.002  0.343
2015 Fatrai S, van Schelven SJ, Ubink I, Govaert KM, Raats D, Koster J, Verheem A, Borel Rinkes IH, Kranenburg O. Maintenance of Clonogenic KIT(+) Human Colon Tumor Cells Requires Secretion of Stem Cell Factor by Differentiated Tumor Cells. Gastroenterology. 149: 692-704. PMID 25962936 DOI: 10.1053/J.Gastro.2015.05.003  0.38
2015 van de Wetering M, Francies HE, Francis JM, Bounova G, Iorio F, Pronk A, van Houdt W, van Gorp J, Taylor-Weiner A, Kester L, McLaren-Douglas A, Blokker J, Jaksani S, Bartfeld S, Volckman R, ... Koster J, et al. Prospective derivation of a living organoid biobank of colorectal cancer patients. Cell. 161: 933-45. PMID 25957691 DOI: 10.1016/J.Cell.2015.03.053  0.401
2015 Vellinga TT, Borovski T, de Boer VC, Fatrai S, van Schelven S, Trumpi K, Verheem A, Snoeren N, Emmink BL, Koster J, Rinkes IH, Kranenburg O. SIRT1/PGC1α-Dependent Increase in Oxidative Phosphorylation Supports Chemotherapy Resistance of Colon Cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 21: 2870-9. PMID 25779952 DOI: 10.1158/1078-0432.Ccr-14-2290  0.372
2015 Wegert J, Ishaque N, Vardapour R, Geörg C, Gu Z, Bieg M, Ziegler B, Bausenwein S, Nourkami N, Ludwig N, Keller A, Grimm C, Kneitz S, Williams RD, Chagtai T, ... Koster J, et al. Mutations in the SIX1/2 pathway and the DROSHA/DGCR8 miRNA microprocessor complex underlie high-risk blastemal type Wilms tumors. Cancer Cell. 27: 298-311. PMID 25670083 DOI: 10.1016/J.Ccell.2015.01.002  0.387
2015 Von Stedingk K, De Preter K, Vandesompele J, Noguera R, Øra I, Koster J, Versteeg R, Påhlman S, Lindgren D, Axelson H. Individual patient risk stratification of high-risk neuroblastomas using a two-gene score suited for clinical use International Journal of Cancer. 137: 868-877. PMID 25652004 DOI: 10.1002/Ijc.29461  0.348
2015 van Wezel EM, Zwijnenburg D, Zappeij-Kannegieter L, Bus E, van Noesel MM, Molenaar JJ, Versteeg R, Fiocco M, Caron HN, van der Schoot CE, Koster J, Tytgat GA. Whole-genome sequencing identifies patient-specific DNA minimal residual disease markers in neuroblastoma. The Journal of Molecular Diagnostics : Jmd. 17: 43-52. PMID 25445214 DOI: 10.1016/J.Jmoldx.2014.09.005  0.352
2015 Groningen Tv, Nowakowska NE, Akogul N, Broekmans M, Bras J, Booij J, Ebus ME, Molenaar JJ, Westerhout EM, Hamdi M, Sluis Pv, Koster J, Westerman BA, Tytgat GA, Versteeg R, et al. Abstract LB-209: Neuroblastoma is biphasic with classical neuro-epithelial cells and chemoresistant mesenchymal cells controlled by PRRX1-NOTCH signaling Cancer Research. 75. DOI: 10.1158/1538-7445.Am2015-Lb-209  0.425
2014 Bandino A, Geerts D, Koster J, Bachmann AS. Deoxyhypusine synthase (DHPS) inhibitor GC7 induces p21/Rb-mediated inhibition of tumor cell growth and DHPS expression correlates with poor prognosis in neuroblastoma patients. Cellular Oncology (Dordrecht). 37: 387-98. PMID 25315710 DOI: 10.1007/S13402-014-0201-9  0.418
2014 van Keimpema M, Grüneberg LJ, Mokry M, van Boxtel R, Koster J, Coffer PJ, Pals ST, Spaargaren M. FOXP1 directly represses transcription of proapoptotic genes and cooperates with NF-κB to promote survival of human B cells. Blood. 124: 3431-40. PMID 25267198 DOI: 10.1182/Blood-2014-01-553412  0.362
2014 Emmink BL, Laoukili J, Kipp AP, Koster J, Govaert KM, Fatrai S, Verheem A, Steller EJ, Brigelius-Flohé R, Jimenez CR, Borel Rinkes IH, Kranenburg O. GPx2 suppression of H2O2 stress links the formation of differentiated tumor mass to metastatic capacity in colorectal cancer. Cancer Research. 74: 6717-30. PMID 25261240 DOI: 10.1158/0008-5472.Can-14-1645  0.379
2014 Northcott PA, Lee C, Zichner T, Stütz AM, Erkek S, Kawauchi D, Shih DJ, Hovestadt V, Zapatka M, Sturm D, Jones DT, Kool M, Remke M, Cavalli FM, Zuyderduyn S, ... Koster J, et al. Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma. Nature. 511: 428-34. PMID 25043047 DOI: 10.1038/Nature13379  0.322
2014 Hovestadt V, Jones DT, Picelli S, Wang W, Kool M, Northcott PA, Sultan M, Stachurski K, Ryzhova M, Warnatz HJ, Ralser M, Brun S, Bunt J, Jäger N, Kleinheinz K, ... Koster J, et al. Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing. Nature. 510: 537-41. PMID 24847876 DOI: 10.1038/Nature13268  0.366
2014 Kool M, Jones DT, Jäger N, Northcott PA, Pugh TJ, Hovestadt V, Piro RM, Esparza LA, Markant SL, Remke M, Milde T, Bourdeaut F, Ryzhova M, Sturm D, Pfaff E, ... Koster J, et al. Genome sequencing of SHH medulloblastoma predicts genotype-related response to smoothened inhibition. Cancer Cell. 25: 393-405. PMID 24651015 DOI: 10.1016/J.Ccr.2014.02.004  0.331
2014 Mack SC, Witt H, Piro RM, Gu L, Zuyderduyn S, Stütz AM, Wang X, Gallo M, Garzia L, Zayne K, Zhang X, Ramaswamy V, Jäger N, Jones DT, Sill M, ... Koster J, et al. Epigenomic alterations define lethal CIMP-positive ependymomas of infancy. Nature. 506: 445-50. PMID 24553142 DOI: 10.1038/Nature13108  0.351
2014 Bate-Eya LT, Ebus ME, Koster J, den Hartog IJ, Zwijnenburg DA, Schild L, van der Ploeg I, Dolman ME, Caron HN, Versteeg R, Molenaar JJ. Newly-derived neuroblastoma cell lines propagated in serum-free media recapitulate the genotype and phenotype of primary neuroblastoma tumours. European Journal of Cancer (Oxford, England : 1990). 50: 628-37. PMID 24321263 DOI: 10.1016/J.Ejca.2013.11.015  0.353
2014 Lange I, Geerts D, Feith DJ, Mocz G, Koster J, Bachmann AS. Novel interaction of ornithine decarboxylase with sepiapterin reductase regulates neuroblastoma cell proliferation. Journal of Molecular Biology. 426: 332-46. PMID 24096079 DOI: 10.1016/J.Jmb.2013.09.037  0.362
2014 Eleveld TF, Schild L, Koster J, Zwijnenburg D, Ebus ME, van PS, Schulte JH, Caron HN, Versteeg R, Molenaar JJ. Abstract B41: Whole genome sequencing identifies tumor evolution events in relapse neuroblastoma Cancer Research. 74. DOI: 10.1158/1538-7445.Pedcan-B41  0.404
2013 Jäger N, Schlesner M, Jones DT, Raffel S, Mallm JP, Junge KM, Weichenhan D, Bauer T, Ishaque N, Kool M, Northcott PA, Korshunov A, Drews RM, Koster J, Versteeg R, et al. Hypermutation of the inactive X chromosome is a frequent event in cancer. Cell. 155: 567-81. PMID 24139898 DOI: 10.1016/J.Cell.2013.09.042  0.329
2013 Zeilstra J, Joosten SP, Vermeulen L, Koster J, Medema JP, Versteeg R, Spaargaren M, Pals ST. CD44 expression in intestinal epithelium and colorectal cancer is independent of p53 status. Plos One. 8: e72849. PMID 24009708 DOI: 10.1371/Journal.Pone.0072849  0.325
2013 von Stedingk K, Koster J, Piqueras M, Noguera R, Navarro S, Påhlman S, Versteeg R, Ora I, Gisselsson D, Lindgren D, Axelson H. snoRNPs Regulate Telomerase Activity in Neuroblastoma and Are Associated with Poor Prognosis. Translational Oncology. 6: 447-57. PMID 23908688 DOI: 10.1593/Tlo.13112  0.394
2013 Jones DT, Hutter B, Jäger N, Korshunov A, Kool M, Warnatz HJ, Zichner T, Lambert SR, Ryzhova M, Quang DA, Fontebasso AM, Stütz AM, Hutter S, Zuckermann M, Sturm D, ... Koster J, et al. Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma. Nature Genetics. 45: 927-32. PMID 23817572 DOI: 10.1038/Ng.2682  0.409
2013 Van Nes J, Chan A, Van Groningen T, Van Sluis P, Koster J, Versteeg R. A NOTCH3 transcriptional module induces cell motility in neuroblastoma Clinical Cancer Research. 19: 3485-3494. PMID 23649002 DOI: 10.1158/1078-0432.Ccr-12-3021  0.441
2013 Steller EJ, Raats DA, Koster J, Rutten B, Govaert KM, Emmink BL, Snoeren N, van Hooff SR, Holstege FC, Maas C, Borel Rinkes IH, Kranenburg O. PDGFRB promotes liver metastasis formation of mesenchymal-like colorectal tumor cells. Neoplasia (New York, N.Y.). 15: 204-17. PMID 23441134 DOI: 10.1593/Neo.121726  0.412
2013 Yco LP, Geerts D, Koster J, Bachmann AS. PRAF2 stimulates cell proliferation and migration and predicts poor prognosis in neuroblastoma. International Journal of Oncology. 42: 1408-16. PMID 23440329 DOI: 10.3892/Ijo.2013.1836  0.409
2013 Koomoa DL, Geerts D, Lange I, Koster J, Pegg AE, Feith DJ, Bachmann AS. DFMO/eflornithine inhibits migration and invasion downstream of MYCN and involves p27Kip1 activity in neuroblastoma. International Journal of Oncology. 42: 1219-28. PMID 23440295 DOI: 10.3892/Ijo.2013.1835  0.398
2013 Santo EE, Stroeken P, Sluis PV, Koster J, Versteeg R, Westerhout EM. FOXO3a is a major target of inactivation by PI3K/AKT signaling in aggressive neuroblastoma Cancer Research. 73: 2189-2198. PMID 23378341 DOI: 10.1158/0008-5472.Can-12-3767  0.401
2013 Bunt J, Hasselt NA, Zwijnenburg DA, Koster J, Versteeg R, Kool M. OTX2 sustains a bivalent-like state of OTX2-bound promoters in medulloblastoma by maintaining their H3K27me3 levels Acta Neuropathologica. 125: 385-394. PMID 23179372 DOI: 10.1007/S00401-012-1069-2  0.396
2013 Wood AC, Pugh TJ, Morozova O, Koster J, Molenaar JJ, Pineros V, Bosse KR, Perin JC, Diskin S, Diamond MA, Marra M, Meyerson M, Versteeg R, Maris JM. Abstract 3804: Rare DNA variants are enriched at the BARD1 locus and likely influence neuroblastoma susceptibility. Cancer Research. 73: 3804-3804. DOI: 10.1158/1538-7445.Am2013-3804  0.348
2013 Molenaar JJ, Koster J, Ebus M, Zwijnenburg DA, Sluis Pv, Lamers F, Schild L, Ploeg Ivd, Caron HN, Versteeg R. L04.05 Targeted Drug Development In Pediatric Cancer Despite A Low Frequency Of Tumor Driving Mutations Annals of Oncology. 24. DOI: 10.1093/Annonc/Mdt042.19  0.328
2013 Versteeg R, Groningen Tv, Molenaar J, Westerman B, Koster J, Nes Jv. Mutation spectrum and pathway signatures mark neuroblastoma cells reflecting multiple developmental stages Autonomic Neuroscience: Basic and Clinical. 177: 26. DOI: 10.1016/J.Autneu.2013.05.034  0.305
2012 Korshunov A, Ryzhova M, Jones DT, Northcott PA, van Sluis P, Volckmann R, Koster J, Versteeg R, Cowdrey C, Perry A, Picard D, Rosenblum M, Giangaspero F, Aronica E, Schüller U, et al. LIN28A immunoreactivity is a potent diagnostic marker of embryonal tumor with multilayered rosettes (ETMR). Acta Neuropathologica. 124: 875-81. PMID 23161096 DOI: 10.1007/S00401-012-1068-3  0.395
2012 Valentijn LJ, Koster J, Haneveld F, Aissa RA, Van Sluis P, Broekmans MEC, Molenaar JJ, Van Nes J, Versteeg R. Functional MYCN signature predicts outcome of neuroblastoma irrespective of MYCN amplification Proceedings of the National Academy of Sciences of the United States of America. 109: 19190-19195. PMID 23091029 DOI: 10.1073/Pnas.1208215109  0.437
2012 Sturm D, Witt H, Hovestadt V, Khuong-Quang DA, Jones DT, Konermann C, Pfaff E, Tönjes M, Sill M, Bender S, Kool M, Zapatka M, Becker N, Zucknick M, Hielscher T, ... Koster J, et al. Hotspot mutations in H3F3A and IDH1 define distinct epigenetic and biological subgroups of glioblastoma. Cancer Cell. 22: 425-37. PMID 23079654 DOI: 10.1016/J.Ccr.2012.08.024  0.323
2012 Schramm A, Schowe B, Fielitz K, Heilmann M, Martin M, Marschall T, Köster J, Vandesompele J, Vermeulen J, de Preter K, Koster J, Versteeg R, Noguera R, Speleman F, Rahmann S, et al. Exon-level expression analyses identify MYCN and NTRK1 as major determinants of alternative exon usage and robustly predict primary neuroblastoma outcome. British Journal of Cancer. 107: 1409-17. PMID 23047593 DOI: 10.1038/Bjc.2012.391  0.347
2012 Molenaar JJ, Domingo-Fernández R, Ebus ME, Lindner S, Koster J, Drabek K, Mestdagh P, van Sluis P, Valentijn LJ, van Nes J, Broekmans M, Haneveld F, Volckmann R, Bray I, Heukamp L, et al. LIN28B induces neuroblastoma and enhances MYCN levels via let-7 suppression. Nature Genetics. 44: 1199-206. PMID 23042116 DOI: 10.1038/Ng.2436  0.353
2012 Jones DT, Jäger N, Kool M, Zichner T, Hutter B, Sultan M, Cho YJ, Pugh TJ, Hovestadt V, Stütz AM, Rausch T, Warnatz HJ, Ryzhova M, Bender S, Sturm D, ... Koster J, et al. Dissecting the genomic complexity underlying medulloblastoma. Nature. 488: 100-5. PMID 22832583 DOI: 10.1038/Nature11284  0.385
2012 Lamers F, Schild L, Koster J, Speleman F, Øra I, Westerhout EM, van Sluis P, Versteeg R, Caron HN, Molenaar JJ. Identification of BIRC6 as a novel intervention target for neuroblastoma therapy. Bmc Cancer. 12: 285. PMID 22788920 DOI: 10.1186/1471-2407-12-285  0.434
2012 Muñoz J, Stange DE, Schepers AG, van de Wetering M, Koo BK, Itzkovitz S, Volckmann R, Kung KS, Koster J, Radulescu S, Myant K, Versteeg R, Sansom OJ, van Es JH, Barker N, et al. The Lgr5 intestinal stem cell signature: robust expression of proposed quiescent '+4' cell markers. The Embo Journal. 31: 3079-91. PMID 22692129 DOI: 10.1038/Emboj.2012.166  0.351
2012 Kemper K, Versloot M, Cameron K, Colak S, De Sousa E Melo F, De Jong JH, Bleackley J, Vermeulen L, Versteeg R, Koster J, Medema JP. Mutations in the Ras-Raf axis underlie the prognostic value of CD133 in colorectal cancer Clinical Cancer Research. 18: 3132-3141. PMID 22496204 DOI: 10.1158/1078-0432.Ccr-11-3066  0.311
2012 Molenaar JJ, Koster J, Zwijnenburg DA, van Sluis P, Valentijn LJ, van der Ploeg I, Hamdi M, van Nes J, Westerman BA, van Arkel J, Ebus ME, Haneveld F, Lakeman A, Schild L, Molenaar P, et al. Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes. Nature. 483: 589-93. PMID 22367537 DOI: 10.1038/Nature10910  0.339
2012 Lamers F, Schild L, den Hartog IJ, Ebus ME, Westerhout EM, Ora I, Koster J, Versteeg R, Caron HN, Molenaar JJ. Targeted BCL2 inhibition effectively inhibits neuroblastoma tumour growth. European Journal of Cancer (Oxford, England : 1990). 48: 3093-103. PMID 22366560 DOI: 10.1016/J.Ejca.2012.01.037  0.376
2012 Kool M, Korshunov A, Remke M, Jones DT, Schlanstein M, Northcott PA, Cho YJ, Koster J, Schouten-van Meeteren A, van Vuurden D, Clifford SC, Pietsch T, von Bueren AO, Rutkowski S, McCabe M, et al. Molecular subgroups of medulloblastoma: an international meta-analysis of transcriptome, genetic aberrations, and clinical data of WNT, SHH, Group 3, and Group 4 medulloblastomas. Acta Neuropathologica. 123: 473-84. PMID 22358457 DOI: 10.1007/S00401-012-0958-8  0.328
2012 Rausch T, Jones DT, Zapatka M, Stütz AM, Zichner T, Weischenfeldt J, Jäger N, Remke M, Shih D, Northcott PA, Pfaff E, Tica J, Wang Q, Massimi L, Witt H, ... Koster J, et al. Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations. Cell. 148: 59-71. PMID 22265402 DOI: 10.1016/J.Cell.2011.12.013  0.376
2012 Gawecka JE, Geerts D, Koster J, Caliva MJ, Sulzmaier FJ, Opoku-Ansah J, Wada RK, Bachmann AS, Ramos JW. PEA15 impairs cell migration and correlates with clinical features predicting good prognosis in neuroblastoma. International Journal of Cancer. 131: 1556-68. PMID 22213050 DOI: 10.1002/Ijc.27415  0.424
2012 Lamers F, Schild L, Koster J, Versteeg R, Caron HN, Molenaar JJ. Targeted BIRC5 silencing using YM155 causes cell death in neuroblastoma cells with low ABCB1 expression. European Journal of Cancer (Oxford, England : 1990). 48: 763-71. PMID 22088485 DOI: 10.1016/J.Ejca.2011.10.012  0.374
2012 Molenaar JJ, Koster J, Ebus ME, van Sluis P, Westerhout EM, de Preter K, Gisselsson D, Øra I, Speleman F, Caron HN, Versteeg R. Copy number defects of G1-cell cycle genes in neuroblastoma are frequent and correlate with high expression of E2F target genes and a poor prognosis. Genes, Chromosomes & Cancer. 51: 10-9. PMID 22034077 DOI: 10.1002/Gcc.20926  0.43
2012 Bunt J, Hasselt NE, Zwijnenburg DA, Hamdi M, Koster J, Versteeg R, Kool M. OTX2 directly activates cell cycle genes and inhibits differentiation in medulloblastoma cells. International Journal of Cancer. 131: E21-32. PMID 21964830 DOI: 10.1002/Ijc.26474  0.423
2012 Santo EE, Ebus ME, Koster J, Schulte JH, Lakeman A, van Sluis P, Vermeulen J, Gisselsson D, Øra I, Lindner S, Buckley PG, Stallings RL, Vandesompele J, Eggert A, Caron HN, et al. Oncogenic activation of FOXR1 by 11q23 intrachromosomal deletion-fusions in neuroblastoma. Oncogene. 31: 1571-81. PMID 21860421 DOI: 10.1038/Onc.2011.344  0.418
2012 Mack SC, Witt H, Shih D, Zuyderduyn S, Dubuc AM, Koster J, Northcott PA, Bertrand KC, Lau L, Kongkham PN, Wu X, Garzia L, Roberts SS, Massimi L, Meter TV, et al. Abstract 1428: A CpG island methylator phenotype defines a clinically aggressive subgroup of posterior fossa ependymoma Cancer Research. 72: 1428-1428. DOI: 10.1158/1538-7445.Am2012-1428  0.368
2011 De Sousa E Melo F, Colak S, Buikhuisen J, Koster J, Cameron K, De Jong JH, Tuynman JB, Prasetyanti PR, Fessler E, Van Den Bergh SP, Rodermond H, Dekker E, Van Der Loos CM, Pals ST, Van De Vijver MJ, et al. Methylation of cancer-stem-cell-associated wnt target genes predicts poor prognosis in colorectal cancer patients Cell Stem Cell. 9: 476-485. PMID 22056143 DOI: 10.1016/J.Stem.2011.10.008  0.416
2011 Bunt J, Hasselt NE, Zwijnenburg DA, Koster J, Versteeg R, Kool M. Joint binding of OTX2 and MYC in promotor regions is associated with high gene expression in medulloblastoma. Plos One. 6: e26058. PMID 22016811 DOI: 10.1371/Journal.Pone.0026058  0.337
2011 Lamers F, van der Ploeg I, Schild L, Ebus ME, Koster J, Hansen BR, Koch T, Versteeg R, Caron HN, Molenaar JJ. Knockdown of survivin (BIRC5) causes apoptosis in neuroblastoma via mitotic catastrophe. Endocrine-Related Cancer. 18: 657-68. PMID 21859926 DOI: 10.1530/Erc-11-0207  0.354
2011 Murphy DM, Buckley PG, Bryan K, Watters KM, Koster J, van Sluis P, Molenaar J, Versteeg R, Stallings RL. Dissection of the oncogenic MYCN transcriptional network reveals a large set of clinically relevant cell cycle genes as drivers of neuroblastoma tumorigenesis. Molecular Carcinogenesis. 50: 403-11. PMID 21557326 DOI: 10.1002/Mc.20722  0.435
2011 Buckley PG, Das S, Bryan K, Watters KM, Alcock L, Koster J, Versteeg R, Stallings RL. Genome-wide DNA methylation analysis of neuroblastic tumors reveals clinically relevant epigenetic events and large-scale epigenomic alterations localized to telomeric regions. International Journal of Cancer. 128: 2296-305. PMID 20669225 DOI: 10.1002/Ijc.25584  0.404
2010 Bunt J, De Haas TG, Hasselt NE, Zwijnenburg DA, Koster J, Versteeg R, Kool M. Regulation of cell cycle genes and induction of senescence by overexpression of OTX2 in medulloblastoma cell lines Molecular Cancer Research. 8: 1344-1357. PMID 21047732 DOI: 10.1158/1541-7786.Mcr-09-0546  0.421
2010 Hölzel M, Huang S, Koster J, Ora I, Lakeman A, Caron H, Nijkamp W, Xie J, Callens T, Asgharzadeh S, Seeger RC, Messiaen L, Versteeg R, Bernards R. NF1 is a tumor suppressor in neuroblastoma that determines retinoic acid response and disease outcome. Cell. 142: 218-29. PMID 20655465 DOI: 10.1016/J.Cell.2010.06.004  0.326
2010 Borsics T, Lundberg E, Geerts D, Koomoa DL, Koster J, Wester K, Bachmann AS. Subcellular distribution and expression of prenylated Rab acceptor 1 domain family, member 2 (PRAF2) in malignant glioma: Influence on cell survival and migration. Cancer Science. 101: 1624-31. PMID 20412121 DOI: 10.1111/J.1349-7006.2010.01570.X  0.4
2010 Verissimo CS, Molenaar JJ, Meerman J, Puigvert JC, Lamers F, Koster J, Danen EHJ, Van De Water B, Versteeg R, Fitzsimons CP, Vreugdenhil E. Silencing of the microtubule-associated proteins doublecortin-like and doublecortin-like kinase-long induces apoptosis in neuroblastoma cells Endocrine-Related Cancer. 17: 399-414. PMID 20228126 DOI: 10.1677/Erc-09-0301  0.386
2010 Reinartz A, Ehling J, Franz S, Simon V, Bravo IG, Tessmer C, Zentgraf H, Lyer S, Schneider U, Köster J, Raupach K, Kämmerer E, Klaus C, Tischendorf JJ, Kopitz J, et al. Small intestinal mucosa expression of putative chaperone fls485. Bmc Gastroenterology. 10: 27. PMID 20205943 DOI: 10.1186/1471-230X-10-27  0.352
2010 Molenaar JJ, Ebus ME, Koster J, Santo E, Geerts D, Versteeg R, Caron HN. Cyclin D1 is a direct transcriptional target of GATA3 in neuroblastoma tumor cells. Oncogene. 29: 2739-45. PMID 20154722 DOI: 10.1038/Onc.2010.21  0.327
2010 Geerts D, Koster J, Albert D, Koomoa DL, Feith DJ, Pegg AE, Volckmann R, Caron H, Versteeg R, Bachmann AS. The polyamine metabolism genes ornithine decarboxylase and antizyme 2 predict aggressive behavior in neuroblastomas with and without MYCN amplification. International Journal of Cancer. 126: 2012-24. PMID 19960435 DOI: 10.1002/Ijc.25074  0.415
2010 Revet I, Huizenga G, Koster J, Volckmann R, van Sluis P, Versteeg R, Geerts D. MSX1 induces the Wnt pathway antagonist genes DKK1, DKK2, DKK3, and SFRP1 in neuroblastoma cells, but does not block Wnt3 and Wnt5A signalling to DVL3 Cancer Letters. 289: 195-207. PMID 19815336 DOI: 10.1016/J.Canlet.2009.08.019  0.402
2010 Hölzel M, Huang S, Koster J, Ora I, Lakeman A, Caron HN, Callens T, Xie J, Nijkamp W, Asgharzadeh S, Seeger RC, Messiaen L, Versteeg R, Bernards R. Abstract A30: NF1 is a tumor suppressor in neuroblastoma that determines retinoic acid response and disease outcome Clinical Cancer Research. 16. DOI: 10.1158/1078-0432.Tcme10-A30  0.32
2009 Molenaar JJ, Ebus ME, Geerts D, Koster J, Lamers F, Valentijn LJ, Westerhout EM, Versteeg R, Caron HN. Inactivation of CDK2 is synthetically lethal to MYCN over-expressing cancer cells. Proceedings of the National Academy of Sciences of the United States of America. 106: 12968-73. PMID 19525400 DOI: 10.1073/Pnas.0901418106  0.435
2009 Cimmino F, Schulte JH, Zollo M, Koster J, Versteeg R, Iolascon A, Eggert A, Schramm A. Galectin-1 is a major effector of TrkB-mediated neuroblastoma aggressiveness Oncogene. 28: 2015-2023. PMID 19363525 DOI: 10.1038/Onc.2009.70  0.416
2009 Huang S, Laoukili J, Epping MT, Koster J, Hölzel M, Westerman BA, Nijkamp W, Hata A, Asgharzadeh S, Seeger RC, Versteeg R, Beijersbergen RL, Bernards R. ZNF423 is critically required for retinoic acid-induced differentiation and is a marker of neuroblastoma outcome. Cancer Cell. 15: 328-40. PMID 19345331 DOI: 10.1016/J.Ccr.2009.02.023  0.337
2009 Missiaglia E, Selfe J, Hamdi M, Williamson D, Schaaf G, Fang C, Koster J, Summersgill B, Messahel B, Versteeg R, Pritchard-Jones K, Kool M, Shipley J. Genomic imbalances in rhabdomyosarcoma cell lines affect expression of genes frequently altered in primary tumors: an approach to identify candidate genes involved in tumor development. Genes, Chromosomes & Cancer. 48: 455-67. PMID 19235922 DOI: 10.1002/Gcc.20655  0.419
2009 Schulte JH, Lim S, Schramm A, Friedrichs N, Koster J, Versteeg R, Ora I, Pajtler K, Klein-Hitpass L, Kuhfittig-Kulle S, Metzger E, Schüle R, Eggert A, Buettner R, Kirfel J. Lysine-specific demethylase 1 is strongly expressed in poorly differentiated neuroblastoma: implications for therapy. Cancer Research. 69: 2065-71. PMID 19223552 DOI: 10.1158/0008-5472.Can-08-1735  0.366
2009 Schulte JH, Pentek F, Hartmann W, Schramm A, Friedrichs N, Øra I, Koster J, Versteeg R, Kirfel J, Buettner R, Eggert A. The low-affinity neurotrophin receptor, p75, is upregulated in ganglioneuroblastoma/ganglioneuroma and reduces tumorigenicity of neuroblastoma cells in vivo International Journal of Cancer. 124: 2488-2494. PMID 19142969 DOI: 10.1002/Ijc.24204  0.392
2008 Kool M, Koster J, Bunt J, Hasselt NE, Lakeman A, van Sluis P, Troost D, Meeteren NS, Caron HN, Cloos J, Mrsić A, Ylstra B, Grajkowska W, Hartmann W, Pietsch T, et al. Integrated genomics identifies five medulloblastoma subtypes with distinct genetic profiles, pathway signatures and clinicopathological features. Plos One. 3: e3088. PMID 18769486 DOI: 10.1371/Journal.Pone.0003088  0.371
2008 Molenaar JJ, Ebus ME, Koster J, van Sluis P, van Noesel CJ, Versteeg R, Caron HN. Cyclin D1 and CDK4 activity contribute to the undifferentiated phenotype in neuroblastoma. Cancer Research. 68: 2599-609. PMID 18413728 DOI: 10.1158/0008-5472.Can-07-5032  0.376
2008 Hatzis P, van der Flier LG, van Driel MA, Guryev V, Nielsen F, Denissov S, Nijman IJ, Koster J, Santo EE, Welboren W, Versteeg R, Cuppen E, van de Wetering M, Clevers H, Stunnenberg HG. Genome-wide pattern of TCF7L2/TCF4 chromatin occupancy in colorectal cancer cells. Molecular and Cellular Biology. 28: 2732-44. PMID 18268006 DOI: 10.1128/Mcb.02175-07  0.362
2008 Revet I, Huizenga G, Chan A, Koster J, Volckmann R, van Sluis P, Øra I, Versteeg R, Geerts D. The MSX1 homeobox transcription factor is a downstream target of PHOX2B and activates the Delta-Notch pathway in neuroblastoma Experimental Cell Research. 314: 707-719. PMID 18201699 DOI: 10.1016/J.Yexcr.2007.12.008  0.399
2008 Merks JH, Ozgen HM, Koster J, Zwinderman AH, Caron HN, Hennekam RC. Prevalence and patterns of morphological abnormalities in patients with childhood cancer. Jama. 299: 61-9. PMID 18167407 DOI: 10.1001/Jama.2007.66  0.318
2008 Koppen A, Ait-Aissa R, Koster J, Øra I, Bras J, Van Sluis PG, Caron H, Versteeg R, Valentijn LJ. Dickkopf-3 expression is a marker for neuroblasts tumor maturation and is down-regulated by MYCN International Journal of Cancer. 122: 1455-1464. PMID 18059033 DOI: 10.1002/Ijc.23180  0.434
2007 Geerts D, Wallick CJ, Koomoa DLT, Koster J, Versteeg R, Go RCV, Bachmann AS. Expression of prenylated Rab acceptor 1 domain family, member 2 (PRAF2) in neuroblastoma: Correlation with clinical features, cellular localization, and cerulenin-mediated apoptosis regulation Clinical Cancer Research. 13: 6312-6319. PMID 17975142 DOI: 10.1158/1078-0432.Ccr-07-0829  0.411
2007 Koppen A, Ait-Aissa R, Koster J, van Sluis PG, Ora I, Caron HN, Volckmann R, Versteeg R, Valentijn LJ. Direct regulation of the minichromosome maintenance complex by MYCN in neuroblastoma. European Journal of Cancer (Oxford, England : 1990). 43: 2413-22. PMID 17826980 DOI: 10.1016/J.Ejca.2007.07.024  0.394
2007 Gierman HJ, Indemans MH, Koster J, Goetze S, Seppen J, Geerts D, van Driel R, Versteeg R. Domain-wide regulation of gene expression in the human genome. Genome Research. 17: 1286-95. PMID 17693573 DOI: 10.1101/Gr.6276007  0.335
2007 Koppen A, Ait-Aissa R, Hopman S, Koster J, Haneveld F, Versteeg R, Valentijn LJ. Dickkopf-1 is down-regulated by MYCN and inhibits neuroblastoma cell proliferation Cancer Letters. 256: 218-228. PMID 17643814 DOI: 10.1016/J.Canlet.2007.06.011  0.42
2007 Goetze S, Mateos-Langerak J, Gierman HJ, de Leeuw W, Giromus O, Indemans MH, Koster J, Ondrej V, Versteeg R, van Driel R. The three-dimensional structure of human interphase chromosomes is related to the transcriptome map. Molecular and Cellular Biology. 27: 4475-87. PMID 17420274 DOI: 10.1128/Mcb.00208-07  0.315
2004 Fontao L, Tasanen K, Huber M, Hohl D, Koster J, Bruckner-Tuderman L, Sonnenberg A, Borradori L. Molecular consequences of deletion of the cytoplasmic domain of bullous pemphigoid 180 in a patient with predominant features of epidermolysis bullosa simplex. The Journal of Investigative Dermatology. 122: 65-72. PMID 14962091 DOI: 10.1046/J.0022-202X.2003.22125.X  0.301
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