K. G. Rajeev - Related publications

1997 CSIR-National Chemical Laboratory, Pune, India 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Sun R, Brogan D, Buchman A, Yang T, Akbari OS. Ubiquitous and Tissue-specific RNA Targeting in Drosophila Melanogaster using CRISPR/CasRx. Journal of Visualized Experiments : Jove. PMID 33616113 DOI: 10.3791/62154   
2021 Murphy DE, de Jong OG, Evers MJW, Nurazizah M, Schiffelers RM, Vader P. Natural or Synthetic RNA Delivery: A Stoichiometric Comparison of Extracellular Vesicles and Synthetic Nanoparticles. Nano Letters. PMID 33570966 DOI: 10.1021/acs.nanolett.1c00094   
2021 Feng Q, Li Y, Zhao ZX, Wang WM. Contribution of Small RNA Pathway to Interactions of Rice with Pathogens and Insect Pests. Rice (New York, N.Y.). 14: 15. PMID 33547972 DOI: 10.1186/s12284-021-00458-z   
2021 Lee DH, Oh S, Lim K, Lee B, Yi GS, Kim YR, Kim KB, Lee CK, Chi SW, Lee MK. Tertiary RNA Folding-Targeted Drug Screening Strategy Using a Protein Nanopore. Analytical Chemistry. PMID 33475355 DOI: 10.1021/acs.analchem.0c03941   
2021 Mondal M, Peter J, Scarbrough O, Flynt A. Environmental RNAi pathways in the two-spotted spider mite. Bmc Genomics. 22: 42. PMID 33421998 DOI: 10.1186/s12864-020-07322-2   
2021 Galindo-Murillo R, Cohen JS, Akabayov B. Molecular dynamics simulations of acyclic analogs of nucleic acids for antisense inhibition. Molecular Therapy. Nucleic Acids. 23: 527-535. PMID 33510941 DOI: 10.1016/j.omtn.2020.11.023   
2021 Zhang G, Zhang C, Sun J, Xiong Y, Wang L, Chen D. Phytochemical regulation of RNA in treating inflammatory bowel disease and colon cancer: inspirations from Cell and Animal studies. The Journal of Pharmacology and Experimental Therapeutics. PMID 33397676 DOI: 10.1124/jpet.120.000354   
2021 Wang B, Zhang T, Yin J, Yu Y, Xu W, Ding J, Patel DJ, Yang H. Structural basis for self-cleavage prevention by tag:anti-tag pairing complementarity in type VI Cas13 CRISPR systems. Molecular Cell. PMID 33472057 DOI: 10.1016/j.molcel.2020.12.033   
2021 Wang Z, Pan Z, Adhikari S, Harada BT, Shen L, Yuan W, Abeywardana T, Al-Hadid Q, Stark JM, He C, Lin L, Yang Y. m A deposition is regulated by PRMT1-mediated arginine methylation of METTL14 in its disordered C-terminal region. The Embo Journal. e106309. PMID 33459381 DOI: 10.15252/embj.2020106309   
2021 Ahmad P, Bensaoud C, Mekki I, Rehman MU, Kotsyfakis M. Long Non-Coding RNAs and Their Potential Roles in the Vector-Host-Pathogen Triad. Life (Basel, Switzerland). 11. PMID 33466803 DOI: 10.3390/life11010056   
2021 Li Z, Zhang H, Xiao R, Han R, Chang L. Cryo-EM structure of the RNA-guided ribonuclease Cas12g. Nature Chemical Biology. PMID 33495647 DOI: 10.1038/s41589-020-00721-2   
2021 Torabi SF, Vaidya AT, Tycowski KT, DeGregorio SJ, Wang J, Shu MD, Steitz TA, Steitz JA. RNA stabilization by a poly(A) tail 3'-end binding pocket and other modes of poly(A)-RNA interaction. Science (New York, N.Y.). PMID 33414189 DOI: 10.1126/science.abe6523   
2021 Lunardon A, Kariuki SM, Axtell MJ. Expression and processing of polycistronic artificial microRNAs and trans-acting siRNAs from transiently introduced transgenes in Solanum lycopersicum and Nicotiana benthamiana. The Plant Journal : For Cell and Molecular Biology. PMID 33655542 DOI: 10.1111/tpj.15221   
2021 Kokic G, Hillen HS, Tegunov D, Dienemann C, Seitz F, Schmitzova J, Farnung L, Siewert A, Höbartner C, Cramer P. Mechanism of SARS-CoV-2 polymerase stalling by remdesivir. Nature Communications. 12: 279. PMID 33436624 DOI: 10.1038/s41467-020-20542-0   
2021 Yépez VA, Mertes C, Müller MF, Klaproth-Andrade D, Wachutka L, Frésard L, Gusic M, Scheller IF, Goldberg PF, Prokisch H, Gagneur J. Detection of aberrant gene expression events in RNA sequencing data. Nature Protocols. PMID 33462443 DOI: 10.1038/s41596-020-00462-5   
2021 Ortolá B, Cordero T, Hu X, Daròs JA. Intron-assisted, viroid-based production of insecticidal circular double-stranded RNA in . Rna Biology. 1-12. PMID 33472518 DOI: 10.1080/15476286.2021.1872962   
2021 Jiang Y, Chen SJ. RLDOCK method for predicting RNA-small molecule binding modes. Methods (San Diego, Calif.). PMID 33549725 DOI: 10.1016/j.ymeth.2021.01.009   
2021 Liu Y, Li W, Jiang X, Wang Y, Zhang Z, Liu Q, He R, Chen Q, Yang J, Wang L, Wang F, Ma L. A programmable omnipotent Argonaute nuclease from mesophilic bacteria Kurthia massiliensis. Nucleic Acids Research. PMID 33444443 DOI: 10.1093/nar/gkaa1278   
2021 Yong XE, Raghuvamsi PV, Anand GS, Wohland T, Sharma KK. Dengue virus strain 2 capsid protein switches the annealing pathway and reduces intrinsic dynamics of the conserved 5' untranslated region. Rna Biology. 1-14. PMID 33406991 DOI: 10.1080/15476286.2020.1860581   
2021 Lyu P, Lu Z, Cho SI, Yadav M, Yoo KW, Atala A, Kim JS, Lu B. Adenine Base Editor Ribonucleoproteins Delivered by Lentivirus-Like Particles Show High On-Target Base Editing and Undetectable RNA Off-Target Activities. The Crispr Journal. 4: 69-81. PMID 33616436 DOI: 10.1089/crispr.2020.0095   
2021 Ding L, Jiang M, Wang R, Shen D, Wang H, Lu Z, Zheng Q, Wang L, Xia L, Li G. The emerging role of small non-coding RNA in renal cell carcinoma. Translational Oncology. 14: 100974. PMID 33395751 DOI: 10.1016/j.tranon.2020.100974   
2021 Ramirez P, Crouch RJ, Cheung VG, Grunseich C. R-Loop Analysis by Dot-Blot. Journal of Visualized Experiments : Jove. PMID 33554969 DOI: 10.3791/62069   
2021 Lee JW, Chun YL, Kim AY, Lloyd LT, Ko S, Yoon JH, Min KW. Accumulation of Mitochondrial RNA Is Associated with Cellular Senescence. International Journal of Molecular Sciences. 22. PMID 33466722 DOI: 10.3390/ijms22020782   
2021 Dandare A, Rabia G, Khan MJ. In silico analysis of non-coding RNAs and putative target genes implicated in metabolic syndrome. Computers in Biology and Medicine. 130: 104229. PMID 33516961 DOI: 10.1016/j.compbiomed.2021.104229   
2021 Tian T, Shu B, Jiang Y, Ye M, Liu L, Guo Z, Han Z, Wang Z, Zhou X. An Ultralocalized Cas13a Assay Enables Universal and Nucleic Acid Amplification-Free Single-Molecule RNA Diagnostics. Acs Nano. 15: 1167-1178. PMID 33498106 DOI: 10.1021/acsnano.0c08165   
2021 Nisar S, Bhat AA, Singh M, Karedath T, Rizwan A, Hashem S, Bagga P, Reddy R, Jamal F, Uddin S, Chand G, Bedognetti D, El-Rifai W, Frenneaux MP, Macha MA, et al. Insights Into the Role of CircRNAs: Biogenesis, Characterization, Functional, and Clinical Impact in Human Malignancies. Frontiers in Cell and Developmental Biology. 9: 617281. PMID 33614648 DOI: 10.3389/fcell.2021.617281   
2021 Dangerfield TL, Huang NZ, Johnson KA. Expression and Purification of Tag-Free SARS-CoV-2 RNA-Dependent RNA Polymerase in . Star Protocols. 100357. PMID 33558863 DOI: 10.1016/j.xpro.2021.100357   
2021 Wood S, Willbanks A, Cheng JX. The Role of RNA Modifications and RNA-modifying Proteins in Cancer Therapy and Drug Resistance. Current Cancer Drug Targets. PMID 33504307 DOI: 10.2174/1568009621666210127092828   
2021 Louis JM, Agarwal A, Aduri R, Talukdar I. Global analysis of RNA-protein interactions in TNF-α induced alternative splicing in metabolic disorders. Febs Letters. PMID 33417721 DOI: 10.1002/1873-3468.14029   
2021 Wu J, Nagy LE, Liangpunsakul S, Wang L. Non-coding RNA Crosstalk with Nuclear Receptors in Liver Disease. Biochimica Et Biophysica Acta. Molecular Basis of Disease. 166083. PMID 33497819 DOI: 10.1016/j.bbadis.2021.166083   
2021 Wu J, Nagy LE, Liangpunsakul S, Wang L. Non-coding RNA Crosstalk with Nuclear Receptors in Liver Disease. Biochimica Et Biophysica Acta. Molecular Basis of Disease. 166083. PMID 33497819 DOI: 10.1016/j.bbadis.2021.166083   
2021 Zhang B, Su T, Li P, Xin X, Cao Y, Wang W, Zhao X, Zhang D, Yu Y, Li D, Yu S, Zhang F. Identification of long noncoding RNAs involved in resistance to downy mildew in Chinese cabbage. Horticulture Research. 8: 44. PMID 33642586 DOI: 10.1038/s41438-021-00479-1   
2021 Kim M, Jeong M, Hur S, Cho Y, Park J, Jung H, Seo Y, Woo HA, Nam KT, Lee K, Lee H. Engineered ionizable lipid nanoparticles for targeted delivery of RNA therapeutics into different types of cells in the liver. Science Advances. 7. PMID 33637537 DOI: 10.1126/sciadv.abf4398   
2021 Yang Y, Okada S, Sakurai M. Adenosine-to-inosine RNA editing in neurological development and disease. Rna Biology. PMID 33393416 DOI: 10.1080/15476286.2020.1867797   
2021 Zhang MM, Bahal R, Rasmussen TP, Manautou JE, Zhong XB. The growth of siRNA-based therapeutics: updated clinical studies. Biochemical Pharmacology. 114432. PMID 33513339 DOI: 10.1016/j.bcp.2021.114432   
2021 Liu H, Lan T, Li H, Xu L, Chen X, Liao H, Chen X, Du J, Cai Y, Wang J, Li X, Huang J, Yuan K, Zeng Y. Circular RNA circDLC1 inhibits MMP1-mediated liver cancer progression via interaction with HuR. Theranostics. 11: 1396-1411. PMID 33391541 DOI: 10.7150/thno.53227   
2021 Jacq A, Becquet D, Guillen S, Boyer B, Bello-Goutierrez MM, Franc JL, François-Bellan AM. Direct RNA-RNA interaction between Neat1 and RNA targets, as a mechanism for RNAs paraspeckle retention. Rna Biology. PMID 33573434 DOI: 10.1080/15476286.2021.1889253   
2021 Miano V, Codino A, Pandolfini L, Barbieri I. The non-coding epitranscriptome in cancer. Briefings in Functional Genomics. PMID 33564819 DOI: 10.1093/bfgp/elab003   
2021 Kim EY, Wang L, Lei Z, Li H, Fan W, Cho J. Ribosome stalling and SGS3 phase separation prime the epigenetic silencing of transposons. Nature Plants. PMID 33649597 DOI: 10.1038/s41477-021-00867-4   
2021 Yu D, Kaur G, Blumenthal RM, Zhang X, Cheng X. Enzymatic characterization of three human RNA adenosine methyltransferases reveals diverse substrate affinities and reaction optima. The Journal of Biological Chemistry. 100270. PMID 33428944 DOI: 10.1016/j.jbc.2021.100270   
2021 Han S, Ko O, Lee G, Jeong SW, Choi YJ, Lee JB. Rapid Diagnosis of Coronavirus by RNA-Directed RNA Transcription Using an Engineered RNA-based Platform. Nano Letters. PMID 33395304 DOI: 10.1021/acs.nanolett.0c03917   
2021 Chakraborty P, Chattopadhyay D, Roy S. N-protein-RNA interaction is a drug target in a negative strand RNA virus. Virus Research. 198298. PMID 33508356 DOI: 10.1016/j.virusres.2021.198298   
2021 Hurst T, Chen SJ. Deciphering nucleotide modification-induced structure and stability changes. Rna Biology. 1-11. PMID 33586616 DOI: 10.1080/15476286.2021.1882179   
2021 Hagen J, Sarkies P, Selkirk ME. Lentiviral transduction facilitates RNA interference in the nematode parasite Nippostrongylus brasiliensis. Plos Pathogens. 17: e1009286. PMID 33497411 DOI: 10.1371/journal.ppat.1009286   
2021 Athapattu US, Amarasekara CA, Immel JR, Bloom S, Barany F, Nagel AC, Soper SA. Solid-phase XRN1 reactions for RNA cleavage: application in single-molecule sequencing. Nucleic Acids Research. PMID 33511416 DOI: 10.1093/nar/gkab001   
2021 Kjellin J, Avesson L, Reimegård J, Liao Z, Eichinger L, Noegel A, Glöckner G, Schaap P, Söderbom F. Abundantly expressed class of noncoding RNAs conserved through the multicellular evolution of dictyostelid social amoebae. Genome Research. PMID 33479022 DOI: 10.1101/gr.272856.120   
2021 Bitaraf A, Razmara E, Bakhshinejad B, Yousefi H, Vatanmakanian M, Garshasbi M, Cho WC, Babashah S. The oncogenic and tumor suppressive roles of RNA-binding proteins in human cancers. Journal of Cellular Physiology. PMID 33559213 DOI: 10.1002/jcp.30311   
2021 Wang CD, Mansky R, LeBlanc H, Gravel CM, Berry KE. Optimization of a bacterial three-hybrid assay through in vivo ​titration of an RNA-DNA adapter-protein. Rna (New York, N.Y.). PMID 33500316 DOI: 10.1261/rna.077404.120   
2021 Ferenczi S, Solymosi N, Horváth I, Szeőcs N, Grózer Z, Kuti D, Juhász B, Winkler Z, Pankotai T, Sükösd F, Stágel A, Paholcsek M, Dóra D, Nagy N, Kovács KJ, et al. Efficient treatment of a preclinical inflammatory bowel disease model with engineered bacteria. Molecular Therapy. Methods & Clinical Development. 20: 218-226. PMID 33426148 DOI: 10.1016/j.omtm.2020.11.010   
2021 Knutson SD, Heemstra JM. Protein-based molecular recognition tools for detecting and profiling RNA modifications. Current Opinion in Structural Biology. 69: 1-10. PMID 33445115 DOI: 10.1016/j.sbi.2020.12.006