| Year |
Citation |
Score |
| 2019 |
Miraldi ER, Pokrovskii M, Waters A, Castro DM, De Veaux N, Hall J, Lee JY, Ciofani M, Madar A, Carriero N, Littman D, Bonneau R. Leveraging chromatin accessibility for transcriptional regulatory network inference in T Helper 17 Cells. Genome Research. PMID 30696696 DOI: 10.1101/Gr.238253.118 |
0.771 |
|
| 2015 |
Chatterjee SS, Saj A, Gocha T, Murphy M, Gonsalves FC, Zhang X, Hayward P, Akgöl Oksuz B, Shen SS, Madar A, Martinez Arias A, DasGupta R. Inhibition of β-catenin-TCF1 interaction delays differentiation of mouse embryonic stem cells. The Journal of Cell Biology. 211: 39-51. PMID 26459597 DOI: 10.1083/Jcb.201503017 |
0.354 |
|
| 2014 |
Yu B, Doraiswamy H, Chen X, Miraldi E, Arrieta-Ortiz ML, Hafemeister C, Madar A, Bonneau R, Silva CT. Genotet: An Interactive Web-based Visual Exploration Framework to Support Validation of Gene Regulatory Networks. Ieee Transactions On Visualization and Computer Graphics. 20: 1903-12. PMID 26356904 DOI: 10.1109/Tvcg.2014.2346753 |
0.705 |
|
| 2014 |
Chang D, Gao F, Slavney A, Ma L, Waldman YY, Sams AJ, Billing-Ross P, Madar A, Spritz R, Keinan A. Accounting for eXentricities: analysis of the X chromosome in GWAS reveals X-linked genes implicated in autoimmune diseases. Plos One. 9: e113684. PMID 25479423 DOI: 10.1371/Journal.Pone.0113684 |
0.325 |
|
| 2014 |
Guedan S, Chen X, Madar A, Carpenito C, McGettigan SE, Frigault MJ, Lee J, Posey AD, Scholler J, Scholler N, Bonneau R, June CH. ICOS-based chimeric antigen receptors program bipolar TH17/TH1 cells. Blood. 124: 1070-80. PMID 24986688 DOI: 10.1182/Blood-2013-10-535245 |
0.536 |
|
| 2012 |
Ciofani M, Madar A, Galan C, Sellars M, Mace K, Pauli F, Agarwal A, Huang W, Parkurst CN, Muratet M, Newberry KM, Meadows S, Greenfield A, Yang Y, Jain P, et al. A validated regulatory network for Th17 cell specification. Cell. 151: 289-303. PMID 23021777 DOI: 10.1016/J.Cell.2012.09.016 |
0.75 |
|
| 2010 |
Greenfield A, Madar A, Ostrer H, Bonneau R. DREAM4: Combining genetic and dynamic information to identify biological networks and dynamical models. Plos One. 5: e13397. PMID 21049040 DOI: 10.1371/Journal.Pone.0013397 |
0.758 |
|
| 2010 |
Madar A, Greenfield A, Vanden-Eijnden E, Bonneau R. DREAM3: Network inference using dynamic context likelihood of relatedness and the inferelator Plos One. 5. PMID 20339551 DOI: 10.1371/Journal.Pone.0009803 |
0.754 |
|
| 2009 |
Madar A, Greenfield A, Ostrer H, Vanden-Eijnden E, Bonneau R. The Inferelator 2.0: a scalable framework for reconstruction of dynamic regulatory network models. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 5448-51. PMID 19964678 DOI: 10.1109/IEMBS.2009.5334018 |
0.772 |
|
| 2009 |
Madar A, Bonneau R. Learning global models of transcriptional regulatory networks from data. Methods in Molecular Biology (Clifton, N.J.). 541: 181. PMID 19381524 DOI: 10.1007/978-1-59745-243-4_9 |
0.711 |
|
| 2007 |
Bonneau R, Facciotti MT, Reiss DJ, Schmid AK, Pan M, Kaur A, Thorsson V, Shannon P, Johnson MH, Bare JC, Longabaugh W, Vuthoori M, Whitehead K, Madar A, Suzuki L, et al. A predictive model for transcriptional control of physiology in a free living cell. Cell. 131: 1354-65. PMID 18160043 DOI: 10.1016/J.Cell.2007.10.053 |
0.714 |
|
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