Henri Orland - Publications

Institute of Theoretical Physics CEA Saclay 

43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Koehl P, Orland H, Delarue M. Parameterizing elastic network models to capture the dynamics of proteins. Journal of Computational Chemistry. PMID 34117647 DOI: 10.1002/jcc.26701  0.6
2021 Koehl P, Orland H. Fast computation of exact solutions of generic and degenerate assignment problems. Physical Review. E. 103: 042101. PMID 34005932 DOI: 10.1103/PhysRevE.103.042101  0.52
2021 Koehl P, Delarue M, Orland H. Simultaneous Identification of Multiple Binding Sites in Proteins: A Statistical Mechanics Approach. The Journal of Physical Chemistry. B. PMID 33973782 DOI: 10.1021/acs.jpcb.1c02658  0.6
2021 Koehl P, Delarue M, Orland H. Physics approach to the variable-mass optimal-transport problem. Physical Review. E. 103: 012113. PMID 33601576 DOI: 10.1103/PhysRevE.103.012113  0.6
2019 Koehl P, Delarue M, Orland H. Optimal transport at finite temperature. Physical Review. E. 100: 013310. PMID 31499816 DOI: 10.1103/Physreve.100.013310  0.6
2019 Koehl P, Delarue M, Orland H. Statistical Physics Approach to the Optimal Transport Problem. Physical Review Letters. 123: 040603. PMID 31491256 DOI: 10.1103/Physrevlett.123.040603  0.6
2018 Koehl P, Orland H, Delarue M. Numerical Encodings of Amino Acids in Multivariate Gaussian Modeling of Protein Multiple Sequence Alignments. Molecules (Basel, Switzerland). 24. PMID 30597916 DOI: 10.3390/Molecules24010104  0.6
2017 Delarue M, Koehl P, Orland H. Ab initio sampling of transition paths by conditioned Langevin dynamics. The Journal of Chemical Physics. 147: 152703. PMID 29055326 DOI: 10.1063/1.4985651  0.6
2016 Poitevin F, Delarue M, Orland H. Beyond Poisson-Boltzmann: Numerical Sampling of Charge Density Fluctuations. The Journal of Physical Chemistry. B. 120: 6270-7. PMID 27075231 DOI: 10.1021/Acs.Jpcb.6B02650  0.6
2016 Burton AS, Di Stefano M, Lehman N, Orland H, Micheletti C. The elusive quest for RNA knots. Rna Biology. 0. PMID 26828280 DOI: 10.1080/15476286.2015.1132069  0.52
2015 Smaoui MR, Orland H, Waldispühl J. Probing the binding affinity of amyloids to reduce toxicity of oligomers in diabetes. Bioinformatics (Oxford, England). 31: 2294-302. PMID 25777526 DOI: 10.1093/Bioinformatics/Btv143  0.32
2015 Majumdar SN, Orland H. Effective Langevin equations for constrained stochastic processes Journal of Statistical Mechanics: Theory and Experiment. 2015. DOI: 10.1088/1742-5468/2015/06/P06039  0.52
2014 Man X, Delaney KT, Villet MC, Orland H, Fredrickson GH. Coherent states formulation of polymer field theory. The Journal of Chemical Physics. 140: 024905. PMID 24437909 DOI: 10.1063/1.4860978  0.52
2014 Koehl P, Poitevin F, Orland H, Delarue M. Modified Poisson-Boltzmann equations for characterizing biomolecular solvation Journal of Theoretical and Computational Chemistry. 13. DOI: 10.1142/S021963361440001X  0.52
2014 Fredrickson GH, Orland H. Dynamics of polymers: A mean-field theory Journal of Chemical Physics. 140. DOI: 10.1063/1.4865911  0.52
2013 Smaoui MR, Poitevin F, Delarue M, Koehl P, Orland H, Waldispühl J. Computational assembly of polymorphic amyloid fibrils reveals stable aggregates. Biophysical Journal. 104: 683-93. PMID 23442919 DOI: 10.1016/J.Bpj.2012.12.037  0.52
2012 Man X, Andelman D, Orland H. Block copolymer films with free interfaces: ordering by nanopatterned substrates. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 010801. PMID 23005359 DOI: 10.1103/Physreve.86.010801  0.52
2011 Koehl P, Orland H, Delarue M. Adapting Poisson-Boltzmann to the self-consistent mean field theory: application to protein side-chain modeling. The Journal of Chemical Physics. 135: 055104. PMID 21823735 DOI: 10.1063/1.3621831  0.52
2011 Poitevin F, Orland H, Doniach S, Koehl P, Delarue M. AquaSAXS: a web server for computation and fitting of SAXS profiles with non-uniformally hydrated atomic models. Nucleic Acids Research. 39: W184-9. PMID 21665925 DOI: 10.1093/Nar/Gkr430  0.52
2011 Beccara SA, Faccioli P, Sega M, Pederiva F, Garberoglio G, Orland H. Dominant folding pathways of a peptide chain from ab initio quantum-mechanical simulations Journal of Chemical Physics. 134. PMID 21241114 DOI: 10.1063/1.3514149  0.52
2011 Mazzola G, Beccara SA, Faccioli P, Orland H. Fluctuations in the ensemble of reaction pathways Journal of Chemical Physics. 134. DOI: 10.1063/1.3581892  0.52
2009 Corradini O, Faccioli P, Orland H. Simulating stochastic dynamics using large time steps. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 061112. PMID 20365123 DOI: 10.1103/Physreve.80.061112  0.52
2009 Koehl P, Orland H, Delarue M. Computing ion solvation free energies using the dipolar Poisson model. The Journal of Physical Chemistry. B. 113: 5694-7. PMID 19385689 DOI: 10.1021/Jp9010907  0.52
2009 Koehl P, Orland H, Delarue M. Beyond the Poisson-Boltzmann model: modeling biomolecule-water and water-water interactions. Physical Review Letters. 102: 087801. PMID 19257790 DOI: 10.1103/Physrevlett.102.087801  0.52
2009 Koehl P, Orland H, Delarue M. Solvation of ion pairs: The poisson-langevin model 2009 International Conference On Signal Processing Systems, Icsps 2009. 917-923. DOI: 10.1109/ICSPS.2009.128  0.52
2009 Autieri E, Faccioli P, Sega M, Pederiva F, Orland H. Dominant reaction pathways in high-dimensional systems Journal of Chemical Physics. 130. DOI: 10.1063/1.3074271  0.52
2008 Azuara C, Orland H, Bon M, Koehl P, Delarue M. Incorporating dipolar solvents with variable density in Poisson-Boltzmann electrostatics. Biophysical Journal. 95: 5587-605. PMID 18820239 DOI: 10.1529/Biophysj.108.131649  0.52
2008 Faccioli P, Sega M, Pederiva F, Orland H. Stochastic dynamics and dominant protein folding pathways Philosophical Magazine. 88: 4093-4099. DOI: 10.1080/14786430802609644  0.52
2007 Sega M, Faccioli P, Pederiva F, Garberoglio G, Orland H. Quantitative protein dynamics from dominant folding pathways Physical Review Letters. 99. DOI: 10.1103/Physrevlett.99.118102  0.52
2006 Faccioli P, Sega M, Pederiva F, Orland H. Dominant pathways in protein folding Physical Review Letters. 97. PMID 17025856 DOI: 10.1103/Physrevlett.97.108101  0.52
2006 Azuara C, Lindahl E, Koehl P, Orland H, Delarue M. PDB_Hydro: incorporating dipolar solvents with variable density in the Poisson-Boltzmann treatment of macromolecule electrostatics. Nucleic Acids Research. 34: W38-42. PMID 16845031 DOI: 10.1093/Nar/Gkl072  0.52
2006 Burak Y, Orland H. Manning condensation in two dimensions. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 010501. PMID 16486110 DOI: 10.1103/Physreve.73.010501  0.52
2005 Pillsbury M, Orland H, Zee A. Steepest descent calculation of RNA pseudoknots Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 72. PMID 16090005 DOI: 10.1103/Physreve.72.011911  0.52
2004 Burak Y, Andelman D, Orland H. Test-charge theory for the electric double layer. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 016102. PMID 15324124 DOI: 10.1103/Physreve.70.016102  0.52
2001 Hone DW, Orland H. Bridge hopping on conducting polymers in solution Europhysics Letters. 55: 59-65. DOI: 10.1209/Epl/I2001-00381-X  0.52
1996 Doniach S, Garel T, Orland H. Phase diagram of a semiflexible polymer chain in a θ solvent: Application to protein folding Journal of Chemical Physics. 105: 1601-1608. DOI: 10.1063/1.472031  0.52
1995 Doniach S, Bascle J, Garel T, Orland H. Partially folded states of proteins: characterization by X-ray scattering. Journal of Molecular Biology. 254: 960-7. PMID 7500363 DOI: 10.1006/Jmbi.1995.0668  0.52
1995 Orland H, Shapir Y. A disorder-dependent variational method without replicas: Application to the random phase sine-gordon model Epl. 30: 203-208. DOI: 10.1209/0295-5075/30/4/003  0.52
1995 Garel T, Kardar M, Orland H. Adsorption of polymers on a fluctuating surface Epl. 29: 303-308. DOI: 10.1209/0295-5075/29/4/006  0.52
1989 Garel T, Huse DA, Leibler S, Orland H. Localization transition of random chains at interfaces Epl. 8: 9-13. DOI: 10.1209/0295-5075/8/1/002  0.52
1988 Forgacs G, Luck JM, Nieuwenhuizen TM, Orland H. Exact critical behavior of two-dimensional wetting problems with quenched disorder Journal of Statistical Physics. 51: 29-56. DOI: 10.1007/Bf01015319  0.52
1988 Luck JM, Orland H, Smilansky U. On the response of a two-level quantum system to a class of time-dependent quasiperiodic perturbations Journal of Statistical Physics. 53: 551-564. DOI: 10.1007/BF01014213  0.52
1981 Leibler S, Orland H. Functional integral methods for quantum spin systems Annals of Physics. 132: 277-291. DOI: 10.1016/0003-4916(81)90069-5  0.52
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