Ranajeet Ghose - Publications

Affiliations: 
City University of New York, New York, NY, United States 
Area:
NMR, kinases

71 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Stenzoski NE, Zou J, Piserchio A, Ghose R, Holehouse AS, Raleigh DP. The Cold-Unfolded State is Expanded but Contains Long- and Medium-range Contacts and Is Poorly Described by Homopolymer Models. Biochemistry. PMID 32786415 DOI: 10.1021/acs.biochem.0c00469  1
2019 Kaoud TS, Johnson WH, Ebelt ND, Piserchio A, Zamora-Olivares D, Van Ravenstein SX, Pridgen JR, Edupuganti R, Sammons R, Cano M, Warthaka M, Harger M, Tavares CDJ, Park J, Radwan MF, ... ... Ghose R, et al. Modulating multi-functional ERK complexes by covalent targeting of a recruitment site in vivo. Nature Communications. 10: 5232. PMID 31745079 DOI: 10.1038/s41467-019-12996-8  1
2019 Lee K, Kumar EA, Dalby KN, Ghose R. The Role of Calcium in the Interaction between Calmodulin and a Minimal Functional Construct of Eukaryotic Elongation Factor 2 Kinase. Protein Science : a Publication of the Protein Society. PMID 31626716 DOI: 10.1002/pro.3753  1
2019 Sammons RM, Ghose R, Tsai KY, Dalby KN. Targeting ERK beyond the boundaries of the kinase active site in melanoma. Molecular Carcinogenesis. PMID 31190430 DOI: 10.1002/mc.23047  1
2019 Piserchio A, Will N, Giles DH, Hajredini F, Dalby KN, Ghose R. Solution Structure of the Carboxy-Terminal Tandem Repeat Domain of Eukaryotic Elongation Factor 2 Kinase and its Role in Substrate Recognition. Journal of Molecular Biology. PMID 31108082 DOI: 10.1016/j.jmb.2019.05.019  1
2019 Sammons RM, Perry NA, Li Y, Cho EJ, Piserchio A, Zamora-Olivares DP, Ghose R, Kaoud TS, Debevec G, Bartholomeusz C, Gurevich VV, Iverson TM, Giulianotti M, Houghten RA, Dalby KN. A Novel Class of Common Docking Domain Inhibitors That Prevent ERK2 Activation and Substrate Phosphorylation. Acs Chemical Biology. PMID 31058487 DOI: 10.1021/acschembio.9b00093  1
2018 Alphonse S, Ghose R. wwwwMethyl NMR Spectroscopy: Measurement of Dynamics in Viral RNA-directed RNA Polymerases. Methods (San Diego, Calif.). PMID 29857193 DOI: 10.1016/j.ymeth.2018.05.021  1
2018 Will N, Lee K, Hajredini F, Giles DH, Abzalimov RR, Clarkson M, Dalby KN, Ghose R. Structural Dynamics of the Activation of Elongation Factor 2 Kinase by Ca-Calmodulin. Journal of Molecular Biology. PMID 29800565 DOI: 10.1016/j.jmb.2018.05.033  1
2018 Alphonse S, Itin B, Khayat R, Ghose R. Sequential Protein Expression and Capsid Assembly in Cell: Toward the Study of Multiprotein Viral Capsids Using Solid-State Nuclear Magnetic Resonance Techniques. Biochemistry. PMID 29465229 DOI: 10.1021/acs.biochem.8b00003  1
2017 Piserchio A, Warthaka M, Kaoud TS, Callaway K, Dalby KN, Ghose R. Local destabilization, rigid body, and fuzzy docking facilitate the phosphorylation of the transcription factor Ets-1 by the mitogen-activated protein kinase ERK2. Proceedings of the National Academy of Sciences of the United States of America. PMID 28716922 DOI: 10.1073/pnas.1702973114  1
2017 Reed BR, Yakovleva L, Shuman S, Ghose R. Characterization of DNA binding by the isolated N-terminal domain of vaccinia virus DNA topoisomerase IB. Biochemistry. PMID 28570045 DOI: 10.1021/acs.biochem.7b00042  1
2017 Alphonse S, Ghose R. Cystoviral RNA-directed RNA Polymerases: Regulation of RNA Synthesis on Multiple Time and Length Scales. Virus Research. PMID 28104452 DOI: 10.1016/j.virusres.2017.01.006  1
2016 Tavares CD, Giles DH, Stancu G, Chitjian CA, Ferguson SB, Wellmann RM, Kaoud TS, Ghose R, Dalby KN. Signal Integration at Elongation Factor 2 Kinase; the Roles of Calcium, Calmodulin and Ser-500 Phosphorylation. The Journal of Biological Chemistry. PMID 27956550 DOI: 10.1074/jbc.M116.753277  1
2016 Will N, Piserchio A, Snyder I, Ferguson SB, Giles DH, Dalby KN, Ghose R. Structure of the C-terminal Helical Repeat Domain of Eukaryotic Elongation Factor 2 Kinase. Biochemistry. PMID 27571275 DOI: 10.1021/acs.biochem.6b00711  1
2016 Lee K, Alphonse S, Piserchio A, Tavares CD, Giles DH, Wellmann RM, Dalby KN, Ghose R. Structural Basis for the Recognition of Eukaryotic Elongation Factor 2 Kinase by Calmodulin. Structure (London, England : 1993). PMID 27499441 DOI: 10.1016/j.str.2016.06.015  1
2015 Alphonse S, Bhattacharya S, Wang H, Ghose R. Methyl Relaxation Measurements Reveal Patterns of Fast Dynamics in a Viral RNA-Directed RNA Polymerase. Biochemistry. 54: 5828-38. PMID 26333183 DOI: 10.1021/acs.biochem.5b00828  1
2015 Piserchio A, Ramakrishan V, Wang H, Kaoud TS, Arshava B, Dutta K, Dalby KN, Ghose R. Erratum: Structural and Dynamic Features of F-recruitment Site Driven Substrate Phosphorylation by ERK2. Scientific Reports. 5: 12369. PMID 26230360 DOI: 10.1038/srep12369  1
2015 Piserchio A, Ramakrishan V, Wang H, Kaoud TS, Arshava B, Dutta K, Dalby KN, Ghose R. Structural and Dynamic Features of F-recruitment Site Driven Substrate Phosphorylation by ERK2. Scientific Reports. 5: 11127. PMID 26054059 DOI: 10.1038/srep11127  1
2014 Alphonse S, Arnold JJ, Bhattacharya S, Wang H, Kloss B, Cameron CE, Ghose R. Cystoviral polymerase complex protein P7 uses its acidic C-terminal tail to regulate the RNA-directed RNA polymerase P2. Journal of Molecular Biology. 426: 2580-93. PMID 24813120 DOI: 10.1016/j.jmb.2014.04.028  1
2014 Temel DB, Dutta K, Ghose R. Sequence-specific backbone ¹H, ¹³C and ¹⁵N assignments of the catalytic domain of the Escherichia coli protein tyrosine kinase, Wzc. Biomolecular Nmr Assignments. 8: 37-41. PMID 23225198 DOI: 10.1007/s12104-012-9448-0  1
2013 Ren Z, C Franklin M, Ghose R. Structure of the RNA-directed RNA polymerase from the cystovirus φ12. Proteins. 81: 1479-84. PMID 23568335 DOI: 10.1002/prot.24297  1
2013 Temel DB, Dutta K, Alphonse S, Nourikyan J, Grangeasse C, Ghose R. Regulatory interactions between a bacterial tyrosine kinase and its cognate phosphatase. The Journal of Biological Chemistry. 288: 15212-28. PMID 23543749 DOI: 10.1074/jbc.M113.457804  1
2013 Ghose R. A measured approach: determining the PLCγ1 docking site on Itk using a biochemical ruler. Journal of Molecular Biology. 425: 679-82. PMID 23266656 DOI: 10.1016/j.jmb.2012.12.013  1
2012 Piserchio A, Francis DM, Koveal D, Dalby KN, Page R, Peti W, Ghose R. Docking interactions of hematopoietic tyrosine phosphatase with MAP kinases ERK2 and p38α. Biochemistry. 51: 8047-9. PMID 23030599 DOI: 10.1021/bi3012725  1
2012 Piserchio A, Dalby KN, Ghose R. Assignment of backbone resonances in a eukaryotic protein kinase - ERK2 as a representative example. Methods in Molecular Biology (Clifton, N.J.). 831: 359-68. PMID 22167683 DOI: 10.1007/978-1-61779-480-3_19  1
2012 Piserchio A, Cowburn D, Ghose R. Expression and purification of Src-family kinases for solution NMR studies. Methods in Molecular Biology (Clifton, N.J.). 831: 111-31. PMID 22167671 DOI: 10.1007/978-1-61779-480-3_7  1
2012 Natarajan A, Dutta K, Temel DB, Nair PA, Shuman S, Ghose R. Solution structure and DNA-binding properties of the phosphoesterase domain of DNA ligase D. Nucleic Acids Research. 40: 2076-88. PMID 22084199 DOI: 10.1093/nar/gkr950  1
2011 Lee S, Warthaka M, Yan C, Kaoud TS, Piserchio A, Ghose R, Ren P, Dalby KN. A model of a MAPK•substrate complex in an active conformation: a computational and experimental approach. Plos One. 6: e18594. PMID 21494553 DOI: 10.1371/journal.pone.0018594  1
2011 Piserchio A, Warthaka M, Devkota AK, Kaoud TS, Lee S, Abramczyk O, Ren P, Dalby KN, Ghose R. Solution NMR insights into docking interactions involving inactive ERK2. Biochemistry. 50: 3660-72. PMID 21449613 DOI: 10.1021/bi2000559  1
2011 Ren Z, Ghose R. Slow conformational dynamics in the cystoviral RNA-directed RNA polymerase P2: influence of substrate nucleotides and template RNA. Biochemistry. 50: 1875-84. PMID 21244027 DOI: 10.1021/bi101863g  1
2011 Dutta K, Natarajan A, Nair PA, Shuman S, Ghose R. Sequence-specific 1H, 13C and 15N assignments of the phosphoesterase (PE) domain of Pseudomonas aeruginosa DNA ligase D (LigD). Biomolecular Nmr Assignments. 5: 151-5. PMID 21213076 DOI: 10.1007/s12104-010-9289-7  1
2011 Zhubayev A, Ghose R. Physics-based integration of shear wave dispersion properties for soil property estimation: Laboratory investigation Seg Technical Program Expanded Abstracts. 30: 1343-1347. DOI: 10.1190/1.3627452  0.01
2010 Ferrage F, Reichel A, Battacharya S, Cowburn D, Ghose R. On the measurement of ¹⁵N-{¹H} nuclear Overhauser effects. 2. Effects of the saturation scheme and water signal suppression. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 207: 294-303. PMID 20951618 DOI: 10.1016/j.jmr.2010.09.014  1
2010 Nicholas MP, Eryilmaz E, Ferrage F, Cowburn D, Ghose R. Nuclear spin relaxation in isotropic and anisotropic media. Progress in Nuclear Magnetic Resonance Spectroscopy. 57: 111-58. PMID 20633361 DOI: 10.1016/j.pnmrs.2010.04.003  1
2010 Ren Z, Wang H, Ghose R. Dynamics on multiple timescales in the RNA-directed RNA polymerase from the cystovirus phi6. Nucleic Acids Research. 38: 5105-18. PMID 20385578 DOI: 10.1093/nar/gkq210  1
2010 Piserchio A, Nair PA, Shuman S, Ghose R. Solution NMR studies of Chlorella virus DNA ligase-adenylate. Journal of Molecular Biology. 395: 291-308. PMID 19913033 DOI: 10.1016/j.jmb.2009.11.007  1
2009 Piserchio A, Nair PA, Shuman S, Ghose R. Sequence-specific 1H N, 13C, and 15N backbone resonance assignments of the 34 kDa Paramecium bursaria Chlorella virus 1 (PBCV1) DNA ligase. Biomolecular Nmr Assignments. 3: 77-80. PMID 19636951 DOI: 10.1007/s12104-009-9145-9  1
2009 Piserchio A, Ghose R, Cowburn D. Optimized bacterial expression and purification of the c-Src catalytic domain for solution NMR studies. Journal of Biomolecular Nmr. 44: 87-93. PMID 19399371 DOI: 10.1007/s10858-009-9318-y  1
2009 Ferrage F, Cowburn D, Ghose R. Accurate sampling of high-frequency motions in proteins by steady-state (15)N-{(1)H} nuclear Overhauser effect measurements in the presence of cross-correlated relaxation. Journal of the American Chemical Society. 131: 6048-9. PMID 19358609 DOI: 10.1021/ja809526q  1
2008 Eryilmaz E, Benach J, Su M, Seetharaman J, Dutta K, Wei H, Gottlieb P, Hunt JF, Ghose R. Structure and dynamics of the P7 protein from the bacteriophage phi 12. Journal of Molecular Biology. 382: 402-22. PMID 18647606 DOI: 10.1016/j.jmb.2008.07.006  1
2008 Ferrage F, Piserchio A, Cowburn D, Ghose R. On the measurement of 15N-{1H} nuclear Overhauser effects. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 192: 302-13. PMID 18417394 DOI: 10.1016/j.jmr.2008.03.011  1
2007 Del Rio A, Dutta K, Chavez J, Ubarretxena-Belandia I, Ghose R. Solution structure and dynamics of the N-terminal cytosolic domain of rhomboid intramembrane protease from Pseudomonas aeruginosa: insights into a functional role in intramembrane proteolysis. Journal of Molecular Biology. 365: 109-22. PMID 17059825 DOI: 10.1016/j.jmb.2006.09.047  1
2006 Natarajan A, Ghose R, Hill JM. Structure and dynamics of ASC2, a pyrin domain-only protein that regulates inflammatory signaling. The Journal of Biological Chemistry. 281: 31863-75. PMID 16905547 DOI: 10.1074/jbc.M605458200  1
2006 Ji H, Shekhtman A, Ghose R, McDonnell JM, Cowburn D. NMR determination that an extended BH3 motif of pro-apoptotic BID is specifically bound to BCL-XL. Magnetic Resonance in Chemistry : Mrc. 44: S101-7. PMID 16826547 DOI: 10.1002/mrc.1856  1
2006 Pujato M, Navarro A, Versace R, Mancusso R, Ghose R, Tasayco ML. The pH-dependence of amide chemical shift of Asp/Glu reflects its pKa in intrinsically disordered proteins with only local interactions. Biochimica Et Biophysica Acta. 1764: 1227-33. PMID 16787768 DOI: 10.1016/j.bbapap.2006.04.014  1
2006 Del Rio A, Anand A, Ghose R. Detection of correlated dynamics on multiple timescales by measurement of the differential relaxation of zero- and double-quantum coherences involving sidechain methyl groups in proteins. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 180: 1-17. PMID 16473030 DOI: 10.1016/j.jmr.2006.01.002  1
2005 Pradhan P, Ghose R, Green ME. Voltage gating and anions, especially phosphate: a model system. Biochimica Et Biophysica Acta. 1717: 97-103. PMID 16289371 DOI: 10.1016/j.bbamem.2005.09.018  1
2004 Dutta K, Shi H, Cruz-Chu ER, Kami K, Ghose R. Dynamic influences on a high-affinity, high-specificity interaction involving the C-terminal SH3 domain of p67phox. Biochemistry. 43: 8094-106. PMID 15209505 DOI: 10.1021/bi030268d  1
2004 Majumdar A, Ghose R. Probing slow backbone dynamics in proteins using TROSY-based experiments to detect cross-correlated time-modulation of isotropic chemical shifts. Journal of Biomolecular Nmr. 28: 213-27. PMID 14752255 DOI: 10.1023/B:JNMR.0000013705.98136.99  1
2002 Shekhtman A, Ghose R, Goger M, Cowburn D. NMR structure determination and investigation using a reduced proton (REDPRO) labeling strategy for proteins. Febs Letters. 524: 177-82. PMID 12135763 DOI: 10.1016/S0014-5793(02)03051-X  1
2001 Shekhtman A, Ghose R, Wang D, Cole PA, Cowburn D. Novel mechanism of regulation of the non-receptor protein tyrosine kinase Csk: insights from NMR mapping studies and site-directed mutagenesis. Journal of Molecular Biology. 314: 129-38. PMID 11724538 DOI: 10.1006/jmbi.2001.5126  1
2001 Ghose R, Shekhtman A, Goger MJ, Ji H, Cowburn D. A novel, specific interaction involving the Csk SH3 domain and its natural ligand. Nature Structural Biology. 8: 998-1004. PMID 11685249 DOI: 10.1038/nsb1101-998  1
2001 Ghose R, Fushman D, Cowburn D. Determination of the rotational diffusion tensor of macromolecules in solution from nmr relaxation data with a combination of exact and approximate methods--application to the determination of interdomain orientation in multidomain proteins. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 149: 204-17. PMID 11318619 DOI: 10.1006/jmre.2001.2295  1
2000 Chiarparin E, Pelupessy P, Ghose R, Bodenhausen G. Relative orientation of C(α)H(α)-bond vectors of successive residues in proteins through cross-correlated relaxation in NMR Journal of the American Chemical Society. 122: 1758-1761. DOI: 10.1021/ja9933184  1
2000 Fushman D, Ghose R, Cowburn D. The effect of finite sampling on the determination of orientational properties: A theoretical treatment with application to interatomic vectors in proteins Journal of the American Chemical Society. 122: 10640-10649. DOI: 10.1021/ja001128j  1
2000 Ghose R. Average Liouvillian theory in nuclear magnetic resonance - Principles, properties, and applications Concepts in Magnetic Resonance. 12: 152-172.  1
1999 Huang K, Ghose R, Flanagan JM, Prestegard JH. Backbone dynamics of the N-terminal domain in E. coli DnaJ determined by 15N- and 13CO-relaxation measurements. Biochemistry. 38: 10567-77. PMID 10441154 DOI: 10.1021/bi990263+  1
1999 Pelupessy P, Chiarparin E, Ghose R, Bodenhausen G. Efficient determination of angles subtended by C(alpha)-H(alpha) and N-H(N) vectors in proteins via dipole-dipole cross-correlation. Journal of Biomolecular Nmr. 13: 375-80. PMID 10383199 DOI: 10.1023/A:1008383205836  1
1999 Cutting B, Ghose R, Bodenhausen G. Tilt angle dependence of cross-relaxation in off-resonance ROESY. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 138: 326-9. PMID 10341138 DOI: 10.1006/jmre.1999.1734  1
1999 Eykyn TR, Ghose R, Bodenhausen G. Offset profiles of selective pulses in isotopically labeled macromolecules. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 136: 211-3. PMID 9986763 DOI: 10.1006/jmre.1998.1623  1
1999 Pelupessy P, Chiarparin E, Ghose R, Bodenhausen G. Simultaneous determination of Ψ and Φ angles in proteins from measurements of cross-correlated relaxation effects Journal of Biomolecular Nmr. 14: 277-280. DOI: 10.1023/A:1008339928400  1
1999 Chiarparin E, Pelupessy P, Ghose R, Bodenhausen G. Relaxation of two-spin coherence due to cross-correlated fluctuations of dipole-dipole couplings and anisotropic shifts in NMR of 15N,13C-labeled biomolecules Journal of the American Chemical Society. 121: 6876-6883. DOI: 10.1021/ja984390p  1
1999 Ghose R, Eykyn TR, Bodenhausen G. Average Liouvillian theory revisited: Cross-correlated relaxation between chemical shift anisotropy and dipolar couplings in the rotating frame in nuclear magnetic resonance Molecular Physics. 96: 1281-1288.  1
1998 Ghose R, Huang K, Prestegard JH. Measurement of cross correlation between dipolar coupling and chemical shift anisotropy in the spin relaxation of 13C, 15N-labeled proteins. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 135: 487-99. PMID 9878476 DOI: 10.1006/jmre.1998.1602  1
1998 Ghose R, Prestegard JH. Improved estimation of CSA-dipolar coupling cross-correlation rates from laboratory-frame relaxation experiments. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 134: 308-14. PMID 9867423  1
1998 Ghose R, Prestegard JH. Improved estimation of CSA-dipolar coupling cross-correlation rates from laboratory-frame relaxation experiments Journal of Magnetic Resonance (San Diego, Calif. : 1997). 134: 308-14. PMID 9761706 DOI: 10.1006/jmre.1998.1499  1
1997 Ghose R, Evans CA, Prestegard JH. Origin of the correlation time dependence of coherence transfer distortions in rotating frame cross-relaxation spectra. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 128: 207-16. PMID 9356275 DOI: 10.1006/jmre.1997.1221  1
1997 Ghose R, Prestegard JH. Electron spin-nuclear spin cross-correlation effects on multiplet splittings in paramagnetic proteins. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 128: 138-43. PMID 9356268 DOI: 10.1006/jmre.1997.1227  1
1996 Ghose R, Geiger O, Prestegard JH. NMR investigations of the structural properties of the nodulation protein, NodF, from Rhizobium leguminosarum and its homology with Escherichia coli acyl carrier protein. Febs Letters. 388: 66-72. PMID 8654592 DOI: 10.1016/0014-5793(96)00512-1  1
1996 Salvatore BA, Ghose R, Prestegard JH. NMR studies of a 13C,15N-labeled GM4-lactam glycolipid at an oriented model-membrane interface Journal of the American Chemical Society. 118: X1-4008.  1
1994 Ghose R, Marino JP, Wiberg KB, Prestegard JH. Dependence of 13C chemical shifts on glycosidic torsional angles in ribonucleic acids Journal of the American Chemical Society. 116: 8827-8828.  1
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