Dennis T. Bong - Publications

Affiliations: 
Chemistry and Biochemistry Ohio State University, Columbus, Columbus, OH 
Area:
organic chemistry at interfaces, particularly lipid membranes
Website:
http://chemistry.osu.edu/faculty/bong

30/51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Liang Y, Mao J, Bong D. Synthetic bPNAs as allosteric triggers of hammerhead ribozyme catalysis. Methods in Enzymology. 623: 151-175. PMID 31239045 DOI: 10.1016/Bs.Mie.2019.04.028  0.328
2019 Miao S, Liang Y, Marathe I, Mao J, DeSantis C, Bong D. Duplex stem replacement with bPNA+ triplex hybrid stems enables reporting on tertiary interactions of internal RNA domains. Journal of the American Chemical Society. PMID 31094510 DOI: 10.1021/Jacs.9B03435  0.313
2017 Mao J, DeSantis C, Bong D. Small molecule recognition triggers secondary and tertiary interactions in DNA folding and hammerhead ribozyme catalysis. Journal of the American Chemical Society. PMID 28691825 DOI: 10.1021/Jacs.7B05448  0.314
2016 Zhou Z, Munyaradzi O, Xia X, Green D, Bong D. High Capacity Drug Carriers from Common Polymer Amphiphiles. Biomacromolecules. PMID 27476544 DOI: 10.1021/Acs.Biomac.6B00960  0.311
2016 Pratumyot Y, Torres OB, Bong D. Assessment of RNA carrier function in peptide amphiphiles derived from the HIV fusion peptide. Peptides. 79: 27-30. PMID 26988874 DOI: 10.1016/J.Peptides.2016.03.004  0.378
2015 Zhou Z, Xia X, Bong D. Synthetic Polymer Hybridization with DNA and RNA Directs Nanoparticle Loading, Silencing Delivery, and Aptamer Function. Journal of the American Chemical Society. 137: 8920-3. PMID 26138550 DOI: 10.1021/Jacs.5B05481  0.303
2015 Piao X, Xia X, Mao J, Bong D. Peptide ligation and RNA cleavage via an abiotic template interface. Journal of the American Chemical Society. 137: 3751-4. PMID 25747470 DOI: 10.1021/Jacs.5B00236  0.337
2015 Mao J, Bong D. Synthesis of DNA-Binding Peptoids Synlett. 26: 1581-1585. DOI: 10.1055/S-0034-1380698  0.313
2014 Xia X, Piao X, Bong D. Bifacial peptide nucleic acid as an allosteric switch for aptamer and ribozyme function. Journal of the American Chemical Society. 136: 7265-8. PMID 24796374 DOI: 10.1021/Ja5032584  0.317
2013 Piao X, Xia X, Bong D. Bifacial peptide nucleic acid directs cooperative folding and assembly of binary, ternary, and quaternary DNA complexes. Biochemistry. 52: 6313-23. PMID 23964711 DOI: 10.1021/Bi4008963  0.375
2013 Ma M, Bong D. Controlled fusion of synthetic lipid membrane vesicles. Accounts of Chemical Research. 46: 2988-97. PMID 23879805 DOI: 10.1021/Ar400065M  0.31
2013 Zhou Z, Bong D. Small-molecule/polymer recognition triggers aqueous-phase assembly and encapsulation. Langmuir. 29: 144-150. PMID 23205819 DOI: 10.1021/La304457Y  0.301
2012 Zeng Y, Pratumyot Y, Piao X, Bong D. Discrete assembly of synthetic peptide-DNA triplex structures from polyvalent melamine-thymine bifacial recognition. Journal of the American Chemical Society. 134: 832-835. PMID 22201288 DOI: 10.1021/Ja2099326  0.386
2011 Ma M, Bong D. Protein assembly directed by synthetic molecular recognition motifs. Organic & Biomolecular Chemistry. 9: 7296-9. PMID 21912803 DOI: 10.1039/C1Ob05998J  0.31
2011 Torres O, Bong D. Determinants of Membrane Activity from Mutational Analysis of the HIV Fusion Peptide Biochemistry. 50: 5195-5207. PMID 21561063 DOI: 10.1021/Bi200696S  0.376
2011 Ma M, Chatterjee S, Zhang M, Bong D. Stabilization of vesicular and supported membranes by glycolipid oxime polymers. Chemical Communications (Cambridge, England). 47: 2853-5. PMID 21253633 DOI: 10.1039/C0Cc05137C  0.311
2011 Ma M, Bong D. Directed peptide assembly at the lipid-water interface cooperatively enhances membrane binding and activity. Langmuir : the Acs Journal of Surfaces and Colloids. 27: 1480-6. PMID 21194228 DOI: 10.1021/La104405R  0.429
2009 Ma M, Gong Y, Bong D. Lipid membrane adhesion and fusion driven by designed, minimally multivalent hydrogen-bonding lipids. Journal of the American Chemical Society. 131: 16919-26. PMID 19877659 DOI: 10.1021/Ja9072657  0.337
2008 Torres O, Yüksel D, Bernardina M, Kumar K, Bong D. Peptide tertiary structure nucleation by side-chain crosslinking with metal complexation and double "click" cycloaddition. Chembiochem : a European Journal of Chemical Biology. 9: 1701-5. PMID 18600813 DOI: 10.1002/Cbic.200800040  0.51
2008 Gong Y, Ma M, Luo Y, Bong D. Functional determinants of a synthetic vesicle fusion system. Journal of the American Chemical Society. 130: 6196-205. PMID 18402445 DOI: 10.1021/Ja711184U  0.367
2006 Gong Y, Luo Y, Bong D. Membrane activation : Selective vesicle fusion via small molecule recognition Journal of the American Chemical Society. 128: 14430-14431. PMID 17090005 DOI: 10.1021/Ja0644576  0.368
2004 Bong D, Tam I, Breslow R. Oligothiophene Isocyanides for Platinum-Based Molecular Electronic Applications Journal of the American Chemical Society. 126: 11796-11797. PMID 15382906 DOI: 10.1021/Ja045904P  0.584
2001 Bong DT, Ghadiri MR. Self-Assembling Cyclic Peptide Cylinders as Nuclei for Crystal Engineering. Angewandte Chemie (International Ed. in English). 40: 2163-2166. PMID 29712186 DOI: 10.1002/1521-3773(20010601)40:11<2163::Aid-Anie2163>3.0.Co;2-U  0.53
2001 Bong DT, Ghadiri MR. Chemoselective Pd(0)-catalyzed peptide coupling in water. Organic Letters. 3: 2509-11. PMID 11483047 DOI: 10.1021/ol016169e  0.434
2001 Bong DT, Ghadiri MR. Self-Assembling Cyclic Peptide Cylinders as Nuclei for Crystal Engineering This work was supported in part by the Office of Naval Research and the National Institutes of Health (GM 52190). We thank R.K. Chadja for crystallographic analysis and N. Kresge for assistance with computer graphics representations. Angewandte Chemie (International Ed. in English). 40: 2163-2166. PMID 11433476 DOI: 10.1002/1521-3773(20010601)40:11<2163::AID-ANIE2163>3.0.CO;2-U  0.445
2001 Bong DT, Clark TD, Granja JR, Ghadiri MR. Self-Assembling Organic Nanotubes. Angewandte Chemie (International Ed. in English). 40: 988-1011. PMID 11268062 DOI: 10.1002/1521-3773(20010316)40:6<988::Aid-Anie9880>3.0.Co;2-N  0.498
2001 Bong DT, Clark TD, Granja JR, Ghadiri MR. Organische Nanoröhren durch Selbstorganisation Angewandte Chemie. 113: 1016-1041. DOI: 10.1002/1521-3757(20010316)113:6<1016::Aid-Ange10160>3.0.Co;2-8  0.451
2000 Bong DT, Janshoff A, Steinem C, Ghadiri MR. Membrane partitioning of the cleavage peptide in flock house virus. Biophysical Journal. 78: 839-45. PMID 10653796 DOI: 10.1016/S0006-3495(00)76641-0  0.548
1999 Bong DT, Steinem C, Janshoff A, Johnson JE, Reza Ghadiri M. A highly membrane-active peptide in Flock House virus: implications for the mechanism of nodavirus infection. Chemistry & Biology. 6: 473-81. PMID 10381406 DOI: 10.1016/S1074-5521(99)80065-9  0.394
1999 Janshoff A, Bong DT, Steinem C, Johnson JE, Ghadiri MR. An animal virus-derived peptide switches membrane morphology: possible relevance to nodaviral transfection processes. Biochemistry. 38: 5328-36. PMID 10220319 DOI: 10.1021/Bi982976I  0.554
Low-probability matches (unlikely to be authored by this person)
2019 Xia X, Zhou Z, DeSantis C, Rossi JJ, Bong D. Triplex hybridization of siRNA with bifacial glycopolymer nucleic acid enables hepatocyte-targeted silencing. Acs Chemical Biology. PMID 31141333 DOI: 10.1021/Acschembio.9B00273  0.298
2008 Ma M, Paredes A, Bong D. Intra- and intermembrane pairwise molecular recognition between synthetic hydrogen-bonding phospholipids. Journal of the American Chemical Society. 130: 14456-8. PMID 18850702 DOI: 10.1021/Ja806954U  0.292
2020 Liang Y, Miao S, Mao J, DeSantis C, Bong D. Context-sensitive cleavage of folded DNAs by loop-targeting bPNAs. Biochemistry. PMID 32519542 DOI: 10.1021/Acs.Biochem.0C00362  0.291
2012 Bandyopadhyay S, Xia X, Maiseiyeu A, Mihai G, Rajagopalan S, Bong D. Z-Group ketone chain transfer agents for RAFT polymer nanoparticle modification via hydrazone conjugation. Macromolecules. 45: 6766-6773. PMID 23148126 DOI: 10.1021/Ma301536F  0.287
2014 Xia X, Piao X, Fredrick K, Bong D. Bifacial PNA complexation inhibits enzymatic access to DNA and RNA. Chembiochem : a European Journal of Chemical Biology. 15: 31-6. PMID 24259287 DOI: 10.1002/Cbic.201300536  0.284
2021 Cespedes GF, Nobre TM, Oliveira ON, Bong D, Cilli EM. On the role of surrounding regions in the fusion peptide in dengue virus infection. Virology. 557: 62-69. PMID 33667752 DOI: 10.1016/j.virol.2021.02.012  0.274
2010 Bandyopadhyay S, Bong D. Synthesis of Trifunctional Phosphatidylserine Probes for Identification of Lipid-Binding Proteins European Journal of Organic Chemistry. 2011: 751-758. DOI: 10.1002/Ejoc.201001264  0.272
2011 Bhattacharjee S, Bong D. Protein-Polymer Grafts via a Soy Protein Derived Macro-RAFT Chain Transfer Agent Journal of Polymers and the Environment. 19: 203-208. DOI: 10.1007/S10924-010-0264-2  0.26
2022 Devari S, Bhunia D, Bong D. Synthesis of Bifacial Peptide Nucleic Acids with Diketopiperazine Backbones. Synlett : Accounts and Rapid Communications in Synthetic Organic Chemistry. 33: 965-968. PMID 35874045 DOI: 10.1055/a-1802-6873  0.22
2021 Rundell S, Munyaradzi O, Bong D. Enhanced Triplex Hybridization of DNA and RNA via Syndiotactic Side Chain Presentation in Minimal bPNAs. Biochemistry. 61: 85-91. PMID 34955016 DOI: 10.1021/acs.biochem.1c00693  0.213
2011 Ma M, Bong D. Determinants of cyanuric acid and melamine assembly in water. Langmuir : the Acs Journal of Surfaces and Colloids. 27: 8841-53. PMID 21688852 DOI: 10.1021/La201415D  0.211
2016 Zhang Y, Beckstead AA, Hu Y, Piao X, Bong D, Kohler B. Excited-State Dynamics of Melamine and Its Lysine Derivative Investigated by Femtosecond Transient Absorption Spectroscopy. Molecules (Basel, Switzerland). 21. PMID 27916910 DOI: 10.3390/Molecules21121645  0.21
2021 Miao S, Bhunia D, Devari S, Liang Y, Munyaradzi O, Rundell S, Bong D. Bifacial PNAs Destabilize MALAT1 by 3' A-Tail Displacement from the U-Rich Internal Loop. Acs Chemical Biology. PMID 34382766 DOI: 10.1021/acschembio.1c00575  0.206
2022 Munyaradzi O, Rundell S, Bong D. Impact of bPNA backbone structural constraints and composition on triplex hybridization with DNA. Chembiochem : a European Journal of Chemical Biology. PMID 35167719 DOI: 10.1002/cbic.202100707  0.18
2020 Miao S, Liang Y, Rundell S, Bhunia D, Devari S, Munyaradzi O, Bong D. Unnatural bases for recognition of noncoding nucleic acid interfaces. Biopolymers. e23399. PMID 32969496 DOI: 10.1002/bip.23399  0.155
2021 Liang Y, Miao S, Mao J, Devari S, Gonzalez M, Bong D. Screening of minimalist noncanonical sites in duplex DNA and RNA reveals context and motif-selective binding by fluorogenic base probes. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 34693570 DOI: 10.1002/chem.202103616  0.153
2023 Liang Y, Willey S, Chung YC, Lo YM, Miao S, Rundell S, Tu LC, Bong D. Intracellular RNA and DNA tracking by uridine-rich internal loop tagging with fluorogenic bPNA. Nature Communications. 14: 2987. PMID 37225690 DOI: 10.1038/s41467-023-38579-2  0.146
2021 Miao S, Liang Y, Rundell S, Bhunia D, Devari S, Munyaradzi O, Bong D. Corrigendum: Unnatural bases for recognition of noncoding nucleic acid interfaces. Biopolymers. 112: e23467. PMID 34296757 DOI: 10.1002/bip.23467  0.107
2002 Bong DT, Gentric L, Holmes D, Matzger AJ, Scherhag F, Vollhardt KP. Synthesis of bent [4]phenylene (cyclobuta[1,2-a:3,4-b']bisbiphenylene) and structure of a bis(trimethylsilyl) derivative: the last [4]phenylene isomer. Chemical Communications (Cambridge, England). 278-9. PMID 12120403 DOI: 10.1039/B109789J  0.078
2004 Bong DT, Chan EW, Diercks R, Dosa PI, Haley MM, Matzger AJ, Miljani? OS, Vollhardt KP, Bond AD, Teat SJ, Stanger A. Syntheses of syn and anti doublebent [5]phenylene. Organic Letters. 6: 2249-52. PMID 15200332 DOI: 10.1021/Ol049225V  0.072
2022 Bong D, Holliger P, Yang C. Introduction to the themed collection on XNA xeno-nucleic acids. Rsc Chemical Biology. 3: 1299-1300. PMID 36349221 DOI: 10.1039/d2cb90036j  0.07
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