Gregg T. Beckham - Publications

Affiliations: 
National Bioenergy Center National Renewable Energy Laboratory, Golden, CO, United States 
Area:
biomass conversion to liquid fuels
Website:
http://www.nrel.gov/biomass/staff_pages/gregg_beckham.html

117 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Prates ET, Crowley MF, Skaf MS, Beckham GT. The Catalytic Mechanism of Aryl-Ether Bond Cleavage in Lignin by LigF and LigG. The Journal of Physical Chemistry. B. PMID 31687816 DOI: 10.1021/acs.jpcb.9b06243  0.92
2019 Vermaas JV, Kont R, Beckham GT, Crowley MF, Gudmundsson M, Sandgren M, Ståhlberg J, Väljamäe P, Knott BC. The dissociation mechanism of processive cellulases. Proceedings of the National Academy of Sciences of the United States of America. PMID 31666327 DOI: 10.1073/pnas.1913398116  0.92
2019 Vermaas JV, Dixon RA, Chen F, Mansfield SD, Boerjan W, Ralph J, Crowley MF, Beckham GT. Passive membrane transport of lignin-related compounds. Proceedings of the National Academy of Sciences of the United States of America. PMID 31659054 DOI: 10.1073/pnas.1904643116  0.92
2019 Machovina MM, Mallinson SJB, Knott BC, Meyers AW, Garcia-Borràs M, Bu L, Gado JE, Oliver A, Schmidt GP, Hinchen DJ, Crowley MF, Johnson CW, Neidle EL, Payne CM, Houk KN, ... Beckham GT, et al. Enabling microbial syringol conversion through structure-guided protein engineering. Proceedings of the National Academy of Sciences of the United States of America. PMID 31235604 DOI: 10.1073/pnas.1820001116  0.92
2019 Elder T, Carlos Del Río J, Ralph J, Rencoret J, Kim H, Beckham GT. Radical coupling reactions of piceatannol and monolignols: A density functional theory study. Phytochemistry. 164: 12-23. PMID 31060026 DOI: 10.1016/j.phytochem.2019.04.003  0.52
2019 Ciesielski PN, Wagner R, Bharadwaj VS, Killgore J, Mittal A, Beckham GT, Decker SR, Himmel ME, Crowley MF. Nanomechanics of cellulose deformation reveal molecular defects that facilitate natural deconstruction. Proceedings of the National Academy of Sciences of the United States of America. PMID 31036649 DOI: 10.1073/pnas.1900161116  0.92
2018 Zheng F, Vermaas JV, Zheng J, Wang Y, Tu T, Wang X, Xie X, Yao B, Beckham GT, Luo H. Characterizing Activity and Thermostability of GH5 Endoglucanase Chimeras from Mesophilic and Thermophilic Parents. Applied and Environmental Microbiology. PMID 30552196 DOI: 10.1128/AEM.02079-18  0.84
2018 Vermaas JV, Bentley GJ, Beckham GT, Crowley MF. Membrane Permeability of Terpenoids Explored with Molecular Simulation. The Journal of Physical Chemistry. B. PMID 30352510 DOI: 10.1021/acs.jpcb.8b08688  0.92
2018 Mallinson SJB, Machovina MM, Silveira RL, Garcia-Borràs M, Gallup N, Johnson CW, Allen MD, Skaf MS, Crowley MF, Neidle EL, Houk KN, Beckham GT, DuBois JL, McGeehan JE. A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion. Nature Communications. 9: 2487. PMID 29950589 DOI: 10.1038/s41467-018-04878-2  0.92
2018 Prates ET, Guan X, Li Y, Wang X, Chaffey PK, Skaf MS, Crowley MF, Tan Z, Beckham GT. The impact of -glycan chemistry on the stability of intrinsically disordered proteins. Chemical Science. 9: 3710-3715. PMID 29780502 DOI: 10.1039/c7sc05016j  0.92
2018 Settle AE, Berstis L, Zhang S, Rorrer N, Hu H, Richards R, Beckham G, Crowley M, Vardon D. Iodine-catalyzed isomerization of dimethyl muconate. Chemsuschem. PMID 29687956 DOI: 10.1002/cssc.201800606  0.52
2018 Austin HP, Allen MD, Donohoe BS, Rorrer NA, Kearns FL, Silveira RL, Pollard BC, Dominick G, Duman R, El Omari K, Mykhaylyk V, Wagner A, Michener WE, Amore A, Skaf MS, ... ... Beckham GT, et al. Characterization and engineering of a plastic-degrading aromatic polyesterase. Proceedings of the National Academy of Sciences of the United States of America. PMID 29666242 DOI: 10.1073/pnas.1718804115  0.92
2018 Taylor LE, Knott BC, Baker JO, Alahuhta PM, Hobdey SE, Linger JG, Lunin VV, Amore A, Subramanian V, Podkaminer K, Xu Q, VanderWall TA, Schuster LA, Chaudhari YB, Adney WS, ... ... Beckham GT, et al. Engineering enhanced cellobiohydrolase activity. Nature Communications. 9: 1186. PMID 29567941 DOI: 10.1038/s41467-018-03501-8  0.92
2017 Amore A, Knott BC, Supekar NT, Shajahan A, Azadi P, Zhao P, Wells L, Linger JG, Hobdey SE, Vander Wall TA, Shollenberger T, Yarbrough JM, Tan Z, Crowley MF, Himmel ME, ... ... Beckham GT, et al. Distinct roles of N- and O-glycans in cellulase activity and stability. Proceedings of the National Academy of Sciences of the United States of America. PMID 29229855 DOI: 10.1073/pnas.1714249114  0.92
2017 Amore A, Knott BC, Supekar NT, Shajahan A, Azadi P, Zhao P, Wells L, Linger JG, Hobdey SE, Vander Wall TA, Shollenberger T, Yarbrough JM, Tan Z, Crowley MF, Himmel ME, ... ... Beckham GT, et al. Distinct roles of N- and O-glycans in cellulase activity and stability. Proceedings of the National Academy of Sciences of the United States of America. PMID 29229855 DOI: 10.1073/pnas.1714249114  0.92
2017 Vermaas JV, Beckham GT, Crowley MF. Membrane Permeability of Fatty Acyl Compounds Studied via Molecular Simulation. The Journal of Physical Chemistry. B. PMID 29040809 DOI: 10.1021/acs.jpcb.7b08233  0.92
2017 Guarnieri MT, Chou YC, Salvachúa D, Mohagheghi A, St John PC, Peterson DJ, Bomble YJ, Beckham GT. Metabolic engineering of Actinobacillus succinogenes provides insights into succinic acid biosynthesis. Applied and Environmental Microbiology. PMID 28625987 DOI: 10.1128/AEM.00996-17  0.44
2016 Mayes HB, Knott BC, Crowley MF, Broadbelt LJ, Ståhlberg J, Beckham GT. Who's on base? Revealing the catalytic mechanism of inverting family 6 glycoside hydrolases. Chemical Science. 7: 5955-5968. PMID 30155195 DOI: 10.1039/c6sc00571c  0.92
2016 Elder T, Berstis L, Beckham GT, Crowley MF. Coupling and Reactions of 5-Hydroxyconiferyl Alcohol in Lignin Formation. Journal of Agricultural and Food Chemistry. PMID 27236926 DOI: 10.1021/acs.jafc.6b02234  0.92
2016 Salvachúa D, Smith H, St John PC, Mohagheghi A, Peterson DJ, Black BA, Dowe N, Beckham GT. Succinic acid production from lignocellulosic hydrolysate by Basfia succiniciproducens. Bioresource Technology. 214: 558-566. PMID 27179951 DOI: 10.1016/j.biortech.2016.05.018  0.92
2016 Knott BC, Crowley MF, Himmel ME, Zimmer J, Beckham GT. Simulations of cellulose translocation in the bacterial cellulose synthase suggest a regulatory mechanism for the dimeric structure of cellulose. Chemical Science (Royal Society of Chemistry : 2010). 7: 3108-3116. PMID 27143998 DOI: 10.1039/C5SC04558D  0.92
2016 Hobdey SE, Knott BC, Haddad Momeni M, Taylor LE, Borisova AS, Podkaminer KK, VanderWall TA, Himmel ME, Decker SR, Beckham GT, Ståhlberg J. Biochemical and structural characterization of two Dictyostelium cellobiohydrolases from the Amoebozoa kingdom reveal a high conservation between distant phylogenetic trees of life. Applied and Environmental Microbiology. PMID 27037126 DOI: 10.1128/AEM.00163-16  0.92
2016 Beckham GT, Johnson CW, Karp EM, Salvachúa D, Vardon DR. Opportunities and challenges in biological lignin valorization. Current Opinion in Biotechnology. 42: 40-53. PMID 26974563 DOI: 10.1016/j.copbio.2016.02.030  0.92
2016 Salvachúa D, Mohagheghi A, Smith H, Bradfield MF, Nicol W, Black BA, Biddy MJ, Dowe N, Beckham GT. Succinic acid production on xylose-enriched biorefinery streams by Actinobacillus succinogenes in batch fermentation. Biotechnology For Biofuels. 9: 28. PMID 26839591 DOI: 10.1186/s13068-016-0425-1  0.92
2016 Jana S, Hamre AG, Wildberger P, Holen MM, Eijsink VG, Beckham GT, Sørlie M, Payne CM. Aromatic-mediated Carbohydrate Recognition in Processive Serratia marcescens Chitinases. The Journal of Physical Chemistry. B. PMID 26824449 DOI: 10.1021/acs.jpcb.5b12610  0.92
2016 Magrini-Bair K, Vardon DR, Beckham GT. Catalysis's role in bioproducts update Rsc Green Chemistry. 2016: 71-91. DOI: 10.1039/9781782622444-00071  0.92
2016 Kruger JS, Cleveland NS, Zhang S, Katahira R, Black BA, Chupka GM, Lammens T, Hamilton PG, Biddy MJ, Beckham GT. Lignin Depolymerization with Nitrate-Intercalated Hydrotalcite Catalysts Acs Catalysis. 6: 1316-1328. DOI: 10.1021/acscatal.5b02062  0.92
2016 Linger JG, Hobdey SE, Franden MA, Fulk EM, Beckham GT. Conversion of levoglucosan and cellobiosan by Pseudomonas putida KT2440 Metabolic Engineering Communications. 3: 24-29. DOI: 10.1016/j.meteno.2016.01.005  0.92
2015 Guan X, Chaffey PK, Zeng C, Greene ER, Chen L, Drake MR, Chen C, Groobman A, Resch MG, Himmel ME, Beckham GT, Tan Z. Molecular-scale features that govern the effects of O-glycosylation on a carbohydrate-binding module. Chemical Science. 6: 7185-7189. PMID 28966766 DOI: 10.1039/c5sc02636a  0.64
2015 Berstis L, Beckham GT, Crowley MF. Electronic coupling through natural amino acids. The Journal of Chemical Physics. 143: 225102. PMID 26671404 DOI: 10.1063/1.4936588  0.92
2015 Greene ER, Himmel ME, Beckham GT, Tan Z. Glycosylation of Cellulases: Engineering Better Enzymes for Biofuels. Advances in Carbohydrate Chemistry and Biochemistry. 72: 63-112. PMID 26613815 DOI: 10.1016/bs.accb.2015.08.001  0.92
2015 Cragg SM, Beckham GT, Bruce NC, Bugg TD, Distel DL, Dupree P, Etxabe AG, Goodell BS, Jellison J, McGeehan JE, McQueen-Mason SJ, Schnorr K, Walton PH, Watts JE, Zimmer M. Lignocellulose degradation mechanisms across the Tree of Life. Current Opinion in Chemical Biology. 29: 108-119. PMID 26583519 DOI: 10.1016/j.cbpa.2015.10.018  0.92
2015 Bradfield MF, Mohagheghi A, Salvachúa D, Smith H, Black BA, Dowe N, Beckham GT, Nicol W. Continuous succinic acid production by Actinobacillus succinogenes on xylose-enriched hydrolysate. Biotechnology For Biofuels. 8: 181. PMID 26581168 DOI: 10.1186/s13068-015-0363-3  0.92
2015 Ferguson GA, Cheng L, Bu L, Kim S, Robichaud DJ, Nimlos MR, Curtiss LA, Beckham GT. Carbocation Stability in H-ZSM5 at High Temperature. The Journal of Physical Chemistry. A. PMID 26501585 DOI: 10.1021/acs.jpca.5b07025  0.92
2015 Happs RM, Guan X, Resch MG, Davis MF, Beckham GT, Tan Z, Crowley MF. O-glycosylation effects on family 1 carbohydrate-binding module solution structures. The Febs Journal. PMID 26307003 DOI: 10.1111/febs.13500  0.92
2015 Yuhara D, Barnes BC, Suh D, Knott BC, Beckham GT, Yasuoka K, Wu DT, Sum AK. Nucleation rate analysis of methane hydrate from molecular dynamics simulations. Faraday Discussions. 179: 463-74. PMID 25876773 DOI: 10.1039/c4fd00219a  0.92
2015 Kim S, Robichaud DJ, Beckham GT, Paton RS, Nimlos MR. Ethanol dehydration in HZSM-5 studied by density functional theory: evidence for a concerted process. The Journal of Physical Chemistry. A. 119: 3604-14. PMID 25802969 DOI: 10.1021/jp513024z  0.92
2015 Vermaas JV, Crowley MF, Beckham GT, Payne CM. Effects of lytic polysaccharide monooxygenase oxidation on cellulose structure and binding of oxidized cellulose oligomers to cellulases. The Journal of Physical Chemistry. B. 119: 6129-43. PMID 25785779 DOI: 10.1021/acs.jpcb.5b00778  0.92
2015 Payne CM, Knott BC, Mayes HB, Hansson H, Himmel ME, Sandgren M, Ståhlberg J, Beckham GT. Fungal cellulases. Chemical Reviews. 115: 1308-448. PMID 25629559 DOI: 10.1021/cr500351c  0.92
2015 Johnson CW, Beckham GT. Aromatic catabolic pathway selection for optimal production of pyruvate and lactate from lignin. Metabolic Engineering. 28: 240-7. PMID 25617773 DOI: 10.1016/j.ymben.2015.01.005  0.92
2015 Guan X, Chaffey PK, Zeng C, Greene ER, Chen L, Drake MR, Chen C, Groobman A, Resch MG, Himmel ME, Beckham GT, Tan Z. Molecular-scale features that govern the effects of O-glycosylation on a carbohydrate-binding module Chemical Science. 6: 7185-7189. DOI: 10.1039/c5sc02636a  0.92
2015 Salvachúa D, Karp EM, Nimlos CT, Vardon DR, Beckham GT. Towards lignin consolidated bioprocessing: simultaneous lignin depolymerization and product generation by bacteria Green Chemistry. 17: 4951-4967. DOI: 10.1039/c5gc01165e  0.92
2015 Vardon DR, Franden MA, Johnson CW, Karp EM, Guarnieri MT, Linger JG, Salm MJ, Strathmann TJ, Beckham GT. Adipic acid production from lignin Energy and Environmental Science. 8: 617-628. DOI: 10.1039/c4ee03230f  0.92
2015 Mayes HB, Nolte MW, Beckham GT, Shanks BH, Broadbelt LJ. The Alpha-Bet(a) of Salty Glucose Pyrolysis: Computational Investigations Reveal Carbohydrate Pyrolysis Catalytic Action by Sodium Ions Acs Catalysis. 5: 192-202. DOI: 10.1021/cs501125n  0.92
2015 Karp EM, Resch MG, Donohoe BS, Ciesielski PN, O'Brien MH, Nill JE, Mittal A, Biddy MJ, Beckham GT. Alkaline Pretreatment of Switchgrass Acs Sustainable Chemistry and Engineering. 3: 1479-1491. DOI: 10.1021/acssuschemeng.5b00201  0.92
2015 Pelzer AW, Sturgeon MR, Yanez AJ, Chupka G, O'Brien MH, Katahira R, Cortright RD, Woods L, Beckham GT, Broadbelt LJ. Acidolysis of α-O-4 Aryl-Ether Bonds in Lignin Model Compounds: A Modeling and Experimental Study Acs Sustainable Chemistry and Engineering. 3: 1339-1347. DOI: 10.1021/acssuschemeng.5b00070  0.92
2014 Barnes BC, Knott BC, Beckham GT, Wu DT, Sum AK. Reaction coordinate of incipient methane clathrate hydrate nucleation. The Journal of Physical Chemistry. B. 118: 13236-43. PMID 25347748 DOI: 10.1021/jp507959q  0.92
2014 Linger JG, Vardon DR, Guarnieri MT, Karp EM, Hunsinger GB, Franden MA, Johnson CW, Chupka G, Strathmann TJ, Pienkos PT, Beckham GT. Lignin valorization through integrated biological funneling and chemical catalysis. Proceedings of the National Academy of Sciences of the United States of America. 111: 12013-8. PMID 25092344 DOI: 10.1073/pnas.1410657111  0.92
2014 Knott BC, Crowley MF, Himmel ME, Ståhlberg J, Beckham GT. Carbohydrate-protein interactions that drive processive polysaccharide translocation in enzymes revealed from a computational study of cellobiohydrolase processivity. Journal of the American Chemical Society. 136: 8810-9. PMID 24869982 DOI: 10.1021/ja504074g  0.92
2014 Beckham GT, Ståhlberg J, Knott BC, Himmel ME, Crowley MF, Sandgren M, Sørlie M, Payne CM. Towards a molecular-level theory of carbohydrate processivity in glycoside hydrolases. Current Opinion in Biotechnology. 27: 96-106. PMID 24863902 DOI: 10.1016/j.copbio.2013.12.002  0.92
2014 Ragauskas AJ, Beckham GT, Biddy MJ, Chandra R, Chen F, Davis MF, Davison BH, Dixon RA, Gilna P, Keller M, Langan P, Naskar AK, Saddler JN, Tschaplinski TJ, Tuskan GA, et al. Lignin valorization: improving lignin processing in the biorefinery. Science (New York, N.Y.). 344: 1246843. PMID 24833396 DOI: 10.1126/science.1246843  0.92
2014 Gudmundsson M, Kim S, Wu M, Ishida T, Momeni MH, Vaaje-Kolstad G, Lundberg D, Royant A, Ståhlberg J, Eijsink VG, Beckham GT, Sandgren M. Structural and electronic snapshots during the transition from a Cu(II) to Cu(I) metal center of a lytic polysaccharide monooxygenase by X-ray photoreduction. The Journal of Biological Chemistry. 289: 18782-92. PMID 24828494 DOI: 10.1074/jbc.M114.563494  0.92
2014 Chen L, Drake MR, Resch MG, Greene ER, Himmel ME, Chaffey PK, Beckham GT, Tan Z. Specificity of O-glycosylation in enhancing the stability and cellulose binding affinity of Family 1 carbohydrate-binding modules. Proceedings of the National Academy of Sciences of the United States of America. 111: 7612-7. PMID 24821760 DOI: 10.1073/pnas.1402518111  0.92
2014 Barnes BC, Beckham GT, Wu DT, Sum AK. Two-component order parameter for quantifying clathrate hydrate nucleation and growth. The Journal of Chemical Physics. 140: 164506. PMID 24784286 DOI: 10.1063/1.4871898  0.92
2014 Ito T, Saikawa K, Kim S, Fujita K, Ishiwata A, Kaeothip S, Arakawa T, Wakagi T, Beckham GT, Ito Y, Fushinobu S. Crystal structure of glycoside hydrolase family 127 β-l-arabinofuranosidase from Bifidobacterium longum. Biochemical and Biophysical Research Communications. 447: 32-7. PMID 24680821 DOI: 10.1016/j.bbrc.2014.03.096  0.92
2014 Nordwald EM, Brunecky R, Himmel ME, Beckham GT, Kaar JL. Charge engineering of cellulases improves ionic liquid tolerance and reduces lignin inhibition. Biotechnology and Bioengineering. 111: 1541-9. PMID 24522957 DOI: 10.1002/bit.25216  0.92
2014 Lloyd RE, Streeter SD, Foster PG, Littlewood DT, Huntley J, Beckham GT, Himmel ME, Cragg SM. The complete mitochondrial genome of Limnoria quadripunctata Holthuis (Isopoda: Limnoriidae). Mitochondrial Dna. PMID 24409843 DOI: 10.3109/19401736.2013.855912  0.92
2014 Mayes HB, Broadbelt LJ, Beckham GT. How sugars pucker: electronic structure calculations map the kinetic landscape of five biologically paramount monosaccharides and their implications for enzymatic catalysis. Journal of the American Chemical Society. 136: 1008-22. PMID 24368073 DOI: 10.1021/ja410264d  0.92
2014 Kim S, Ståhlberg J, Sandgren M, Paton RS, Beckham GT. Quantum mechanical calculations suggest that lytic polysaccharide monooxygenases use a copper-oxyl, oxygen-rebound mechanism. Proceedings of the National Academy of Sciences of the United States of America. 111: 149-54. PMID 24344312 DOI: 10.1073/pnas.1316609111  0.92
2014 Knott BC, Haddad Momeni M, Crowley MF, Mackenzie LF, Götz AW, Sandgren M, Withers SG, Ståhlberg J, Beckham GT. The mechanism of cellulose hydrolysis by a two-step, retaining cellobiohydrolase elucidated by structural and transition path sampling studies. Journal of the American Chemical Society. 136: 321-9. PMID 24341799 DOI: 10.1021/ja410291u  0.92
2014 Mayes HB, Tian J, Nolte MW, Shanks BH, Beckham GT, Gnanakaran S, Broadbelt LJ. Sodium ion interactions with aqueous glucose: insights from quantum mechanics, molecular dynamics, and experiment. The Journal of Physical Chemistry. B. 118: 1990-2000. PMID 24308866 DOI: 10.1021/jp409481f  0.92
2014 Sturgeon MR, O'Brien MH, Ciesielski PN, Katahira R, Kruger JS, Chmely SC, Hamlin J, Lawrence K, Hunsinger GB, Foust TD, Baldwin RM, Biddy MJ, Beckham GT. Lignin depolymerisation by nickel supported layered-double hydroxide catalysts Green Chemistry. 16: 824-835. DOI: 10.1039/c3gc42138d  0.92
2014 Talmadge MS, Baldwin RM, Biddy MJ, McCormick RL, Beckham GT, Ferguson GA, Czernik S, Magrini-Bair KA, Foust TD, Metelski PD, Hetrick C, Nimlos MR. A perspective on oxygenated species in the refinery integration of pyrolysis oil Green Chemistry. 16: 407-453. DOI: 10.1039/c3gc41951g  0.92
2014 Karp EM, Donohoe BS, O'Brien MH, Ciesielski PN, Mittal A, Biddy MJ, Beckham GT. Alkaline pretreatment of corn stover: Bench-scale fractionation and stream characterization Acs Sustainable Chemistry and Engineering. 2: 1481-1491. DOI: 10.1021/sc500126u  0.92
2014 Mayes HB, Nolte MW, Beckham GT, Shanks BH, Broadbelt LJ. The alpha-bet(a) of glucose pyrolysis: Computational and experimental investigations of 5-hydroxymethylfurfural and levoglucosan formation reveal implications for cellulose pyrolysis Acs Sustainable Chemistry and Engineering. 2: 1461-1473. DOI: 10.1021/sc500113m  0.92
2014 Sturgeon MR, Kim S, Lawrence K, Paton RS, Chmely SC, Nimlos M, Foust TD, Beckham GT. A Mechanistic investigation of acid-catalyzed cleavage of aryl-ether linkages: Implications for lignin depolymerization in acidic environments Acs Sustainable Chemistry and Engineering. 2: 472-485. DOI: 10.1021/sc400384w  0.92
2013 Payne CM, Jiang W, Shirts MR, Himmel ME, Crowley MF, Beckham GT. Glycoside hydrolase processivity is directly related to oligosaccharide binding free energy. Journal of the American Chemical Society. 135: 18831-9. PMID 24279927 DOI: 10.1021/ja407287f  0.92
2013 Wu M, Bu L, Vuong TV, Wilson DB, Crowley MF, Sandgren M, Ståhlberg J, Beckham GT, Hansson H. Loop motions important to product expulsion in the Thermobifida fusca glycoside hydrolase family 6 cellobiohydrolase from structural and computational studies. The Journal of Biological Chemistry. 288: 33107-17. PMID 24085303 DOI: 10.1074/jbc.M113.502765  0.92
2013 Dai Z, Aryal UK, Shukla A, Qian WJ, Smith RD, Magnuson JK, Adney WS, Beckham GT, Brunecky R, Himmel ME, Decker SR, Ju X, Zhang X, Baker SE. Impact of alg3 gene deletion on growth, development, pigment production, protein secretion, and functions of recombinant Trichoderma reesei cellobiohydrolases in Aspergillus niger. Fungal Genetics and Biology : Fg & B. 61: 120-32. PMID 24076077 DOI: 10.1016/j.fgb.2013.09.004  0.92
2013 Ciesielski PN, Matthews JF, Tucker MP, Beckham GT, Crowley MF, Himmel ME, Donohoe BS. 3D electron tomography of pretreated biomass informs atomic modeling of cellulose microfibrils. Acs Nano. 7: 8011-9. PMID 23988022 DOI: 10.1021/nn4031542  0.92
2013 Lin Y, Beckham GT, Himmel ME, Crowley MF, Chu JW. Endoglucanase peripheral loops facilitate complexation of glucan chains on cellulose via adaptive coupling to the emergent substrate structures. The Journal of Physical Chemistry. B. 117: 10750-8. PMID 23972069 DOI: 10.1021/jp405897q  0.92
2013 Payne CM, Resch MG, Chen L, Crowley MF, Himmel ME, Taylor LE, Sandgren M, Ståhlberg J, Stals I, Tan Z, Beckham GT. Glycosylated linkers in multimodular lignocellulose-degrading enzymes dynamically bind to cellulose. Proceedings of the National Academy of Sciences of the United States of America. 110: 14646-51. PMID 23959893 DOI: 10.1073/pnas.1309106110  0.92
2013 Kern M, McGeehan JE, Streeter SD, Martin RN, Besser K, Elias L, Eborall W, Malyon GP, Payne CM, Himmel ME, Schnorr K, Beckham GT, Cragg SM, Bruce NC, McQueen-Mason SJ. Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance. Proceedings of the National Academy of Sciences of the United States of America. 110: 10189-94. PMID 23733951 DOI: 10.1073/pnas.1301502110  0.92
2013 Taylor CB, Payne CM, Himmel ME, Crowley MF, McCabe C, Beckham GT. Binding site dynamics and aromatic-carbohydrate interactions in processive and non-processive family 7 glycoside hydrolases. The Journal of Physical Chemistry. B. 117: 4924-33. PMID 23534900 DOI: 10.1021/jp401410h  0.92
2013 Wu M, Beckham GT, Larsson AM, Ishida T, Kim S, Payne CM, Himmel ME, Crowley MF, Horn SJ, Westereng B, Igarashi K, Samejima M, StÃ¥hlberg J, Eijsink VG, Sandgren M. Crystal structure and computational characterization of the lytic polysaccharide monooxygenase GH61D from the Basidiomycota fungus Phanerochaete chrysosporium. The Journal of Biological Chemistry. 288: 12828-39. PMID 23525113 DOI: 10.1074/jbc.M113.459396  0.92
2013 Bu L, Crowley MF, Himmel ME, Beckham GT. Computational investigation of the pH dependence of loop flexibility and catalytic function in glycoside hydrolases. The Journal of Biological Chemistry. 288: 12175-86. PMID 23504310 DOI: 10.1074/jbc.M113.462465  0.92
2013 Ghattyvenkatakrishna PK, Alekozai EM, Beckham GT, Schulz R, Crowley MF, Uberbacher EC, Cheng X. Initial recognition of a cellodextrin chain in the cellulose-binding tunnel may affect cellobiohydrolase directional specificity. Biophysical Journal. 104: 904-12. PMID 23442969 DOI: 10.1016/j.bpj.2012.12.052  0.92
2013 Momeni MH, Payne CM, Hansson H, Mikkelsen NE, Svedberg J, Engström Å, Sandgren M, Beckham GT, Ståhlberg J. Structural, biochemical, and computational characterization of the glycoside hydrolase family 7 cellobiohydrolase of the tree-killing fungus Heterobasidion irregulare. The Journal of Biological Chemistry. 288: 5861-72. PMID 23303184 DOI: 10.1074/jbc.M112.440891  0.92
2013 Resch MG, Donohoe BS, Baker JO, Decker SR, Bayer EA, Beckham GT, Himmel ME. Fungal cellulases and complexed cellulosomal enzymes exhibit synergistic mechanisms in cellulose deconstruction Energy and Environmental Science. 6: 1858-1867. DOI: 10.1039/c3ee00019b  0.92
2013 Chmely SC, Kim S, Ciesielski PN, Jiménez-Osés G, Paton RS, Beckham GT. Mechanistic study of a Ru-xantphos catalyst for tandem alcohol dehydrogenation and reductive aryl-ether cleavage Acs Catalysis. 3: 963-974. DOI: 10.1021/cs400110r  0.92
2012 Matthews JF, Beckham GT, Bergenstråhle-Wohlert M, Brady JW, Himmel ME, Crowley MF. Comparison of Cellulose Iβ Simulations with Three Carbohydrate Force Fields. Journal of Chemical Theory and Computation. 8: 735-48. PMID 26596620 DOI: 10.1021/ct2007692  0.92
2012 Sammond DW, Payne CM, Brunecky R, Himmel ME, Crowley MF, Beckham GT. Cellulase linkers are optimized based on domain type and function: insights from sequence analysis, biophysical measurements, and molecular simulation. Plos One. 7: e48615. PMID 23139804 DOI: 10.1371/journal.pone.0048615  0.92
2012 Payne CM, Baban J, Horn SJ, Backe PH, Arvai AS, Dalhus B, Bjørås M, Eijsink VG, Sørlie M, Beckham GT, Vaaje-Kolstad G. Hallmarks of processivity in glycoside hydrolases from crystallographic and computational studies of the Serratia marcescens chitinases. The Journal of Biological Chemistry. 287: 36322-30. PMID 22952223 DOI: 10.1074/jbc.M112.402149  0.92
2012 Bu L, Nimlos MR, Shirts MR, Ståhlberg J, Himmel ME, Crowley MF, Beckham GT. Product binding varies dramatically between processive and nonprocessive cellulase enzymes. The Journal of Biological Chemistry. 287: 24807-13. PMID 22648408 DOI: 10.1074/jbc.M112.365510  0.92
2012 Vicari KJ, Tallam SS, Shatova T, Joo KK, Scarlata CJ, Humbird D, Wolfrum EJ, Beckham GT. Uncertainty in techno-economic estimates of cellulosic ethanol production due to experimental measurement uncertainty. Biotechnology For Biofuels. 5: 23. PMID 22507382 DOI: 10.1186/1754-6834-5-23  0.92
2012 Nimlos MR, Beckham GT, Matthews JF, Bu L, Himmel ME, Crowley MF. Binding preferences, surface attachment, diffusivity, and orientation of a family 1 carbohydrate-binding module on cellulose. The Journal of Biological Chemistry. 287: 20603-12. PMID 22496371 DOI: 10.1074/jbc.M112.358184  0.92
2012 Beckham GT, Dai Z, Matthews JF, Momany M, Payne CM, Adney WS, Baker SE, Himmel ME. Harnessing glycosylation to improve cellulase activity. Current Opinion in Biotechnology. 23: 338-45. PMID 22186222 DOI: 10.1016/j.copbio.2011.11.030  0.92
2012 Taylor CB, Talib MF, McCabe C, Bu L, Adney WS, Himmel ME, Crowley MF, Beckham GT. Computational investigation of glycosylation effects on a family 1 carbohydrate-binding module. The Journal of Biological Chemistry. 287: 3147-55. PMID 22147693 DOI: 10.1074/jbc.M111.270389  0.92
2012 Matthews JF, Beckham GT, Bergenstråhle-Wohlert M, Brady JW, Himmel ME, Crowley MF. Comparison of cellulose Iβ simulations with three carbohydrate force fields Journal of Chemical Theory and Computation. 8: 735-748. DOI: 10.1021/ct2007692  0.92
2011 Hynninen AP, Matthews JF, Beckham GT, Crowley MF, Nimlos MR. Coarse-Grain Model for Glucose, Cellobiose, and Cellotetraose in Water. Journal of Chemical Theory and Computation. 7: 2137-2150. PMID 26606485 DOI: 10.1021/ct200092t  0.92
2011 Beckham GT, Peters B. Optimizing Nucleus Size Metrics for Liquid-Solid Nucleation from Transition Paths of Near-Nanosecond Duration. The Journal of Physical Chemistry Letters. 2: 1133-8. PMID 26295315 DOI: 10.1021/jz2002887  0.4
2011 Chundawat SP, Beckham GT, Himmel ME, Dale BE. Deconstruction of lignocellulosic biomass to fuels and chemicals. Annual Review of Chemical and Biomolecular Engineering. 2: 121-45. PMID 22432613 DOI: 10.1146/annurev-chembioeng-061010-114205  0.92
2011 Walsh MR, Rainey JD, Lafond PG, Park DH, Beckham GT, Jones MD, Lee KH, Koh CA, Sloan ED, Wu DT, Sum AK. The cages, dynamics, and structuring of incipient methane clathrate hydrates. Physical Chemistry Chemical Physics : Pccp. 13: 19951-9. PMID 21997437 DOI: 10.1039/c1cp21899a  0.92
2011 Payne CM, Bomble YJ, Taylor CB, McCabe C, Himmel ME, Crowley MF, Beckham GT. Multiple functions of aromatic-carbohydrate interactions in a processive cellulase examined with molecular simulation. The Journal of Biological Chemistry. 286: 41028-35. PMID 21965672 DOI: 10.1074/jbc.M111.297713  0.92
2011 Lin Y, Silvestre-Ryan J, Himmel ME, Crowley MF, Beckham GT, Chu JW. Protein allostery at the solid-liquid interface: endoglucanase attachment to cellulose affects glucan clenching in the binding cleft. Journal of the American Chemical Society. 133: 16617-24. PMID 21877736 DOI: 10.1021/ja206692g  0.92
2011 Bu L, Beckham GT, Shirts MR, Nimlos MR, Adney WS, Himmel ME, Crowley MF. Probing carbohydrate product expulsion from a processive cellulase with multiple absolute binding free energy methods. The Journal of Biological Chemistry. 286: 18161-9. PMID 21454590 DOI: 10.1074/jbc.M110.212076  0.92
2011 Beckham GT, Crowley MF. Examination of the α-chitin structure and decrystallization thermodynamics at the nanoscale. The Journal of Physical Chemistry. B. 115: 4516-22. PMID 21452798 DOI: 10.1021/jp200912q  0.92
2011 Beckham GT, Matthews JF, Peters B, Bomble YJ, Himmel ME, Crowley MF. Molecular-level origins of biomass recalcitrance: decrystallization free energies for four common cellulose polymorphs. The Journal of Physical Chemistry. B. 115: 4118-27. PMID 21425804 DOI: 10.1021/jp1106394  0.92
2011 Matthews JF, Bergenstråhle M, Beckham GT, Himmel ME, Nimlos MR, Brady JW, Crowley MF. High-temperature behavior of cellulose I. The Journal of Physical Chemistry. B. 115: 2155-66. PMID 21338135 DOI: 10.1021/jp1106839  0.92
2011 Beckham GT, Bomble YJ, Bayer EA, Himmel ME, Crowley MF. Applications of computational science for understanding enzymatic deconstruction of cellulose. Current Opinion in Biotechnology. 22: 231-8. PMID 21168322 DOI: 10.1016/j.copbio.2010.11.005  0.92
2011 Bomble YJ, Beckham GT, Matthews JF, Nimlos MR, Himmel ME, Crowley MF. Modeling the self-assembly of the cellulosome enzyme complex. The Journal of Biological Chemistry. 286: 5614-23. PMID 21098021 DOI: 10.1074/jbc.M110.186031  0.92
2011 Kim S, Chmely SC, Nimlos MR, Bomble YJ, Foust TD, Paton RS, Beckham GT. Computational study of bond dissociation enthalpies for a large range of native and modified Lignins Journal of Physical Chemistry Letters. 2: 2846-2852. DOI: 10.1021/jz201182w  0.92
2011 Payne CM, Himmel ME, Crowley MF, Beckham GT. Decrystallization of oligosaccharides from the cellulose Iβ surface with molecular simulation Journal of Physical Chemistry Letters. 2: 1546-1550. DOI: 10.1021/jz2005122  0.92
2011 Beckham GT, Peters B. Optimizing nucleus size metrics for liquid-solid nucleation from transition paths of near-nanosecond duration Journal of Physical Chemistry Letters. 2: 1133-1138. DOI: 10.1021/jz2002887  0.92
2011 Walsh MR, Beckham GT, Koh CA, Sloan ED, Wu DT, Sum AK. Methane hydrate nucleation rates from molecular dynamics simulations: Effects of aqueous methane concentration, interfacial curvature, and system size Journal of Physical Chemistry C. 115: 21241-21248. DOI: 10.1021/jp206483q  0.92
2011 Hynninen AP, Matthews JF, Beckham GT, Crowley MF, Nimlos MR. Coarse-grain model for glucose, cellobiose, and cellotetraose in water Journal of Chemical Theory and Computation. 7: 2137-2150. DOI: 10.1021/ct200092t  0.92
2010 Beckham GT, Bomble YJ, Matthews JF, Taylor CB, Resch MG, Yarbrough JM, Decker SR, Bu L, Zhao X, McCabe C, Wohlert J, Bergenstråhle M, Brady JW, Adney WS, Himmel ME, et al. The O-glycosylated linker from the Trichoderma reesei Family 7 cellulase is a flexible, disordered protein. Biophysical Journal. 99: 3773-81. PMID 21112302 DOI: 10.1016/j.bpj.2010.10.032  0.92
2010 Beckham GT, Matthews JF, Bomble YJ, Bu L, Adney WS, Himmel ME, Nimlos MR, Crowley MF. Identification of amino acids responsible for processivity in a Family 1 carbohydrate-binding module from a fungal cellulase. The Journal of Physical Chemistry. B. 114: 1447-53. PMID 20050714 DOI: 10.1021/jp908810a  0.92
2010 Beckham GT, Peters B. New methods to find accurate reaction coordinates by path sampling Acs Symposium Series. 1052: 299-332. DOI: 10.1021/bk-2010-1052.ch013  0.92
2010 Crowley MF, Beckham GT, Bu L, Nimlos MR, Adney WS, Himmel ME. Understanding cellobiohydrolase processivity: Computational study of underlying mechanisms Acs National Meeting Book of Abstracts 0.92
2010 Beckham GT, Adney WS, Matthews JF, Yarbrough J, Nimlos MR, Himmel ME, Crowley MF. Structure-function relationships in the sub-domains of the Family 7 cellulase from Trichoderma reesei Acs National Meeting Book of Abstracts 0.92
2009 Bu L, Beckham GT, Crowley MF, Chang CH, Matthews JF, Bomble YJ, Adney WS, Himmel ME, Nimlos MR. The energy landscape for the interaction of the family 1 carbohydrate-binding module and the cellulose surface is altered by hydrolyzed glycosidic bonds. The Journal of Physical Chemistry. B. 113: 10994-1002. PMID 19594145 DOI: 10.1021/jp904003z  0.92
2009 Adney WS, Jeoh T, Beckham GT, Chou YC, Baker JO, Michener W, Brunecky R, Himmel ME. Probing the role of N-linked glycans in the stability and activity of fungal cellobiohydrolases by mutational analysis Cellulose. 16: 699-709. DOI: 10.1007/s10570-009-9305-1  0.92
2008 Peters B, Zimmermann NE, Beckham GT, Tester JW, Trout BL. Path sampling calculation of methane diffusivity in natural gas hydrates from a water-vacancy assisted mechanism. Journal of the American Chemical Society. 130: 17342-50. PMID 19053189 DOI: 10.1021/ja802014m  0.92
2008 Beckham GT, Peters B, Trout BL. Evidence for a size dependent nucleation mechanism in solid state polymorph transformations. The Journal of Physical Chemistry. B. 112: 7460-6. PMID 18528974 DOI: 10.1021/jp710192u  0.92
2007 Peters B, Beckham GT, Trout BL. Extensions to the likelihood maximization approach for finding reaction coordinates. The Journal of Chemical Physics. 127: 034109. PMID 17655433 DOI: 10.1063/1.2748396  0.92
2007 Beckham GT, Peters B, Starbuck C, Variankaval N, Trout BL. Surface-mediated nucleation in the solid-state polymorph transformation of terephthalic acid. Journal of the American Chemical Society. 129: 4714-23. PMID 17385859 DOI: 10.1021/ja0687567  0.92
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