Swagatika Sahoo - Publications

Affiliations: 
2010-2014 Center for Systems Biology Univerisity of Iceland 

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Sridhar S, Bhalla P, Kullu J, Veerapaneni S, Sahoo S, Bhatt N, Suraishkumar GK. A reactive species reactions module for integration into genome-scale metabolic models for improved insights: Application to cancer. Metabolic Engineering. 80: 78-93. PMID 37689259 DOI: 10.1016/j.ymben.2023.08.006  0.363
2022 Mohammad FK, Palukuri MV, Shivakumar S, Rengaswamy R, Sahoo S. A Computational Framework for Studying Gut-Brain Axis in Autism Spectrum Disorder. Frontiers in Physiology. 13: 760753. PMID 35330929 DOI: 10.3389/fphys.2022.760753  0.375
2022 Bhalla P, Rengaswamy R, Karunagaran D, Suraishkumar GK, Sahoo S. Metabolic modeling of host-microbe interactions for therapeutics in colorectal cancer. Npj Systems Biology and Applications. 8: 1. PMID 35046399 DOI: 10.1038/s41540-021-00210-9  0.491
2020 Thiele I, Sahoo S, Heinken A, Hertel J, Heirendt L, Aurich MK, Fleming RM. Personalized whole-body models integrate metabolism, physiology, and the gut microbiome. Molecular Systems Biology. 16: e8982. PMID 32463598 DOI: 10.15252/Msb.20198982  0.786
2020 Sundararaghavan A, Mukherjee A, Sahoo S, Suraishkumar GK. Mechanism of the oxidative stress mediated increase in lipid accumulation by the bacterium, R. opacus PD630: Experimental analysis and genome-scale metabolic modeling. Biotechnology and Bioengineering. PMID 32159222 DOI: 10.1002/Bit.27330  0.477
2018 Sahoo S, Ranjith Kumar R, Nicolay B, Mohite O, Sivaraman K, Khetan V, Rishi P, Ganesan S, Subramanian K, Raman K, Miles W, Elchuri SV. Metabolite systems profiling identifies exploitable weaknesses in Retinoblastoma. Febs Letters. PMID 30417337 DOI: 10.1002/1873-3468.13294  0.455
2018 Noronha A, Modamio J, Jarosz Y, Guerard E, Sompairac N, Preciat G, Daníelsdóttir AD, Krecke M, Merten D, Haraldsdóttir HS, Heinken A, Heirendt L, Magnúsdóttir S, Ravcheev DA, Sahoo S, et al. The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease. Nucleic Acids Research. PMID 30371894 DOI: 10.1093/Nar/Gky992  0.71
2018 Brunk E, Sahoo S, Zielinski DC, Altunkaya A, Dräger A, Mih N, Gatto F, Nilsson A, Preciat Gonzalez GA, Aurich MK, Prlić A, Sastry A, Danielsdottir AD, Heinken A, Noronha A, et al. Recon3D enables a three-dimensional view of gene variation in human metabolism. Nature Biotechnology. PMID 29457794 DOI: 10.1038/Nbt.4072  0.701
2015 Sahoo S, Haraldsdóttir HS, Fleming RM, Thiele I. Modeling the effects of commonly used drugs on human metabolism. The Febs Journal. 282: 297-317. PMID 25345908 DOI: 10.1111/Febs.13128  0.754
2014 Sahoo S, Aurich MK, Jonsson JJ, Thiele I. Membrane transporters in a human genome-scale metabolic knowledgebase and their implications for disease. Frontiers in Physiology. 5: 91. PMID 24653705 DOI: 10.3389/Fphys.2014.00091  0.807
2013 Sahoo S, Thiele I. Predicting the impact of diet and enzymopathies on human small intestinal epithelial cells. Human Molecular Genetics. 22: 2705-22. PMID 23492669 DOI: 10.1093/Hmg/Ddt119  0.795
2013 Thiele I, Swainston N, Fleming RM, Hoppe A, Sahoo S, Aurich MK, Haraldsdottir H, Mo ML, Rolfsson O, Stobbe MD, Thorleifsson SG, Agren R, Bölling C, Bordel S, Chavali AK, et al. A community-driven global reconstruction of human metabolism. Nature Biotechnology. 31: 419-25. PMID 23455439 DOI: 10.1038/Nbt.2488  0.829
2013 Heinken A, Sahoo S, Fleming RM, Thiele I. Systems-level characterization of a host-microbe metabolic symbiosis in the mammalian gut. Gut Microbes. 4: 28-40. PMID 23022739 DOI: 10.4161/Gmic.22370  0.834
2012 Sahoo S, Franzson L, Jonsson JJ, Thiele I. A compendium of inborn errors of metabolism mapped onto the human metabolic network. Molecular Biosystems. 8: 2545-58. PMID 22699794 DOI: 10.1039/C2Mb25075F  0.821
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