Lin Tian, Ph.D. - Publications

Affiliations: 
Biochemistry and Molecular Medicine University of California, Davis, Davis, CA 
Area:
Genetically Encoded Calcium Sensors

60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Abdelfattah AS, Ahuja S, Akkin T, Allu SR, Brake J, Boas DA, Buckley EM, Campbell RE, Chen AI, Cheng X, Čižmár T, Costantini I, De Vittorio M, Devor A, Doran PR, ... ... Tian L, ... ... Tian L, et al. Neurophotonic tools for microscopic measurements and manipulation: status report. Neurophotonics. 9: 013001. PMID 35493335 DOI: 10.1117/1.NPh.9.S1.013001  0.493
2022 Dong C, Zheng Y, Long-Iyer K, Wright EC, Li Y, Tian L. Fluorescence Imaging of Neural Activity, Neurochemical Dynamics, and Drug-Specific Receptor Conformation with Genetically Encoded Sensors. Annual Review of Neuroscience. PMID 35316611 DOI: 10.1146/annurev-neuro-110520-031137  0.324
2021 Melzer S, Newmark ER, Mizuno GO, Hyun M, Philson AC, Quiroli E, Righetti B, Gregory MR, Huang KW, Levasseur J, Tian L, Sabatini BL. Bombesin-like peptide recruits disinhibitory cortical circuits and enhances fear memories. Cell. PMID 34610277 DOI: 10.1016/j.cell.2021.09.013  0.551
2021 Copits BA, Gowrishankar R, O'Neill PR, Li JN, Girven KS, Yoo JJ, Meshik X, Parker KE, Spangler SM, Elerding AJ, Brown BJ, Shirley SE, Ma KKL, Vasquez AM, Stander MC, ... ... Tian L, et al. A photoswitchable GPCR-based opsin for presynaptic inhibition. Neuron. PMID 33979635 DOI: 10.1016/j.neuron.2021.04.026  0.691
2020 Lee SJ, Lodder B, Chen Y, Patriarchi T, Tian L, Sabatini BL. Cell-type-specific asynchronous modulation of PKA by dopamine in learning. Nature. PMID 33361810 DOI: 10.1038/s41586-020-03050-5  0.77
2020 Unger EK, Keller JP, Altermatt M, Liang R, Matsui A, Dong C, Hon OJ, Yao Z, Sun J, Banala S, Flanigan ME, Jaffe DA, Hartanto S, Carlen J, Mizuno GO, ... ... Tian L, et al. Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning. Cell. PMID 33333022 DOI: 10.1016/j.cell.2020.11.040  0.766
2020 Zou Z, Zhao R, Wu Y, Yang Z, Tian L, Wu S, Wang G, Yu Y, Zhao Q, Chen M, Pei J, Chen F, Zhang Y, Song S, Zhao M, et al. A hybrid and scalable brain-inspired robotic platform. Scientific Reports. 10: 18160. PMID 33097742 DOI: 10.1038/s41598-020-73366-9  0.454
2020 Sabatini BL, Tian L. Imaging Neurotransmitter and Neuromodulator Dynamics In Vivo with Genetically Encoded Indicators. Neuron. 108: 17-32. PMID 33058762 DOI: 10.1016/j.neuron.2020.09.036  0.558
2020 Patriarchi T, Mohebi A, Sun J, Marley A, Liang R, Dong C, Puhger K, Mizuno GO, Davis CM, Wiltgen B, von Zastrow M, Berke JD, Tian L. An expanded palette of dopamine sensors for multiplex imaging in vivo. Nature Methods. PMID 32895537 DOI: 10.1038/S41592-020-0936-3  0.782
2020 Oe Y, Wang X, Patriarchi T, Konno A, Ozawa K, Yahagi K, Hirai H, Tsuboi T, Kitaguchi T, Tian L, McHugh TJ, Hirase H. Author Correction: Distinct temporal integration of noradrenaline signaling by astrocytic second messengers during vigilance. Nature Communications. 11: 3447. PMID 32636373 DOI: 10.1038/S41467-020-17059-X  0.676
2020 Liu L, Miao F, Guo HM, Li N, Jiao SH, Cai S, Liu PL, Zhang SS, Ma J, Weng Y, Sun Y, Tang YS, Zhao F, Zheng Y, Zhang S, ... ... Tian L, et al. Endoscopic Submucosal Dissection of the Angiolipoma at Hypopharynx-Esophageal Introitus. Gastroenterology Research and Practice. 2020: 3581267. PMID 32148476 DOI: 10.1155/2020/3581267  0.51
2020 Oe Y, Wang X, Patriarchi T, Konno A, Ozawa K, Yahagi K, Hirai H, Tian L, McHugh TJ, Hirase H. Distinct temporal integration of noradrenaline signaling by astrocytic second messengers during vigilance. Nature Communications. 11: 471. PMID 31980655 DOI: 10.1038/S41467-020-14378-X  0.714
2020 Graves SM, Xie Z, Stout KA, Zampese E, Burbulla LF, Shih JC, Kondapalli J, Patriarchi T, Tian L, Brichta L, Greengard P, Krainc D, Schumacker PT, Surmeier DJ. Author Correction: Dopamine metabolism by a monoamine oxidase mitochondrial shuttle activates the electron transport chain. Nature Neuroscience. PMID 31911656 DOI: 10.1038/S41593-019-0583-0  0.675
2019 Graves SM, Xie Z, Stout KA, Zampese E, Burbulla LF, Shih JC, Kondapalli J, Patriarchi T, Tian L, Brichta L, Greengard P, Krainc D, Schumacker PT, Surmeier DJ. Dopamine metabolism by a monoamine oxidase mitochondrial shuttle activates the electron transport chain. Nature Neuroscience. PMID 31844313 DOI: 10.1038/S41593-019-0556-3  0.681
2019 Bera K, Kamajaya A, Shivange AV, Muthusamy AK, Nichols AL, Borden PM, Grant S, Jeon J, Lin E, Bishara I, Chin TM, Cohen BN, Kim CH, Unger EK, Tian L, et al. Biosensors Show the Pharmacokinetics of S-Ketamine in the Endoplasmic Reticulum. Frontiers in Cellular Neuroscience. 13: 499. PMID 31798415 DOI: 10.3389/Fncel.2019.00499  0.753
2019 Patriarchi T, Cho JR, Merten K, Marley A, Broussard GJ, Liang R, Williams J, Nimmerjahn A, von Zastrow M, Gradinaru V, Tian L. Imaging neuromodulators with high spatiotemporal resolution using genetically encoded indicators. Nature Protocols. PMID 31732722 DOI: 10.1038/S41596-019-0239-2  0.803
2019 Wang Y, Wang C, Ranefall P, Broussard GJ, Wang Y, Shi G, Lyu B, Wu CT, Wang Y, Tian L, Yu G. SynQuant: An Automatic Tool to Quantify Synapses from Microscopy Images. Bioinformatics (Oxford, England). PMID 31596456 DOI: 10.1093/Bioinformatics/Btz760  0.772
2019 Robinson JE, Coughlin GM, Hori AM, Cho JR, Mackey ED, Turan Z, Patriarchi T, Tian L, Gradinaru V. Optical dopamine monitoring with dLight1 reveals mesolimbic phenotypes in a mouse model of neurofibromatosis type 1. Elife. 8. PMID 31545171 DOI: 10.7554/Elife.48983  0.736
2019 Mohebi A, Pettibone JR, Hamid AA, Wong JT, Vinson LT, Patriarchi T, Tian L, Kennedy RT, Berke JD. Publisher Correction: Dissociable dopamine dynamics for learning and motivation. Nature. PMID 31217588 DOI: 10.1038/S41586-019-1353-6  0.689
2019 Augustine V, Ebisu H, Zhao Y, Lee S, Ho B, Mizuno GO, Tian L, Oka Y. Temporally and Spatially Distinct Thirst Satiation Signals. Neuron. PMID 31153646 DOI: 10.1016/J.Neuron.2019.04.039  0.39
2019 Mohebi A, Pettibone JR, Hamid AA, Wong JT, Vinson LT, Patriarchi T, Tian L, Kennedy RT, Berke JD. Dissociable dopamine dynamics for learning and motivation. Nature. PMID 31118513 DOI: 10.1038/S41586-019-1235-Y  0.708
2019 Robinson JE, Coughlin GM, Hori AM, Cho JR, Mackey ED, Turan Z, Patriarchi T, Tian L, Gradinaru V. Author response: Optical dopamine monitoring with dLight1 reveals mesolimbic phenotypes in a mouse model of neurofibromatosis type 1 Elife. DOI: 10.7554/Elife.48983.036  0.692
2018 de Jong JW, Afjei SA, Pollak Dorocic I, Peck JR, Liu C, Kim CK, Tian L, Deisseroth K, Lammel S. A Neural Circuit Mechanism for Encoding Aversive Stimuli in the Mesolimbic Dopamine System. Neuron. PMID 30503173 DOI: 10.1016/J.Neuron.2018.11.005  0.357
2018 Corre J, van Zessen R, Loureiro M, Patriarchi T, Tian L, Pascoli V, Lüscher C. Dopamine neurons projecting to medial shell of the nucleus accumbens drive heroin reinforcement. Elife. 7. PMID 30373717 DOI: 10.7554/Elife.39945  0.726
2018 Scheerer P, Unger E, Tian L. Protein structures guide the design of a much-needed tool for neuroscience. Nature. 561: 312-313. PMID 30224730 DOI: 10.1038/D41586-018-06670-0  0.732
2018 Broussard GJ, Liang Y, Fridman M, Unger EK, Meng G, Xiao X, Ji N, Petreanu L, Tian L. In vivo measurement of afferent activity with axon-specific calcium imaging. Nature Neuroscience. PMID 30127424 DOI: 10.1038/S41593-018-0211-4  0.768
2018 Mizuno GO, Wang Y, Shi G, Wang Y, Sun J, Papadopoulos S, Broussard GJ, Unger EK, Deng W, Weick J, Bhattacharyya A, Chen CY, Yu G, Looger LL, Tian L. Aberrant Calcium Signaling in Astrocytes Inhibits Neuronal Excitability in a Human Down Syndrome Stem Cell Model. Cell Reports. 24: 355-365. PMID 29996097 DOI: 10.1016/J.Celrep.2018.06.033  0.781
2018 Patriarchi T, Cho JR, Merten K, Howe MW, Marley A, Xiong WH, Folk RW, Broussard GJ, Liang R, Jang MJ, Zhong H, Dombeck D, von Zastrow M, Nimmerjahn A, Gradinaru V, ... ... Tian L, et al. Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors. Science (New York, N.Y.). PMID 29853555 DOI: 10.1126/Science.Aat4422  0.797
2018 Patriarchi T, Shen A, He W, Baikoghli M, Cheng RH, Xiang YK, Coleman MA, Tian L. Nanodelivery of a functional membrane receptor to manipulate cellular phenotype. Scientific Reports. 8: 3556. PMID 29476125 DOI: 10.1038/S41598-018-21863-3  0.68
2018 Corre J, Zessen Rv, Loureiro M, Patriarchi T, Tian L, Pascoli V, Lüscher C. Author response: Dopamine neurons projecting to medial shell of the nucleus accumbens drive heroin reinforcement Elife. DOI: 10.7554/Elife.39945.014  0.706
2018 Maly J, Thillier Y, Or G, Lam K, Sack JT, Tian L, Yarov-Yarovoy V. Rational Engineering and Rosetta Design of a Genetically Encoded Fluorescent Reporter of Protein Conformational Change Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.2264  0.752
2018 Muthusamy AK, Shivange AV, Nichols AL, Kamajaya A, Jeon J, Borden PM, Marvin JS, Unger EK, Bao H, Chapman ER, Tian L, Looger LL, Lester HA. Microscopy Using Fluorescent Drug Biosensors for “Inside-Out Pharmacology” Biophysical Journal. 114: 358a. DOI: 10.1016/J.Bpj.2017.11.1990  0.753
2017 Wang Y, Shi G, Miller DJ, Wang Y, Wang C, Broussard G, Wang Y, Tian L, Yu G. Automated Functional Analysis of Astrocytes from Chronic Time-Lapse Calcium Imaging Data. Frontiers in Neuroinformatics. 11: 48. PMID 28769780 DOI: 10.3389/Fninf.2017.00048  0.787
2017 Sepela RJ, Sherlock BE, Tian L, Marcu L, Sack J. A strategy to measure electrophysiological changes with photoacoustic imaging (Conference Presentation) Proceedings of Spie. 10064. DOI: 10.1117/12.2251050  0.326
2015 Qin L, Fan M, Candas D, Jiang G, Papadopoulos S, Tian L, Woloschak G, Grdina DJ, Li JJ. CDK1 Enhances Mitochondrial Bioenergetics for Radiation-Induced DNA Repair. Cell Reports. 13: 2056-63. PMID 26670043 DOI: 10.1016/J.Celrep.2015.11.015  0.481
2015 Liang R, Broussard GJ, Tian L. Imaging chemical neurotransmission with genetically encoded fluorescent sensors. Acs Chemical Neuroscience. 6: 84-93. PMID 25565280 DOI: 10.1021/Cn500280K  0.799
2014 Broussard GJ, Liang R, Tian L. Monitoring activity in neural circuits with genetically encoded indicators. Frontiers in Molecular Neuroscience. 7: 97. PMID 25538558 DOI: 10.3389/Fnmol.2014.00097  0.813
2013 Akerboom J, Carreras Calderón N, Tian L, Wabnig S, Prigge M, Tolö J, Gordus A, Orger MB, Severi KE, Macklin JJ, Patel R, Pulver SR, Wardill TJ, Fischer E, Schüler C, et al. Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Frontiers in Molecular Neuroscience. 6: 2. PMID 23459413 DOI: 10.3389/Fnmol.2013.00002  0.724
2013 Marvin JS, Borghuis BG, Tian L, Cichon J, Harnett MT, Akerboom J, Gordus A, Renninger SL, Chen TW, Bargmann CI, Orger MB, Schreiter ER, Demb JB, Gan WB, Hires SA, et al. An optimized fluorescent probe for visualizing glutamate neurotransmission. Nature Methods. 10: 162-70. PMID 23314171 DOI: 10.1038/Nmeth.2333  0.799
2013 Macklin JJ, Akerboom J, Schreiter ER, Tian L, Patel R, Mütze J, Iyer V, Karsh B, Colonell J, Harris TD, Looger LL. Two Photon Photophysics of Fluorescent Protein Calcium Indicators Biophysical Journal. 104: 682a. DOI: 10.1016/J.Bpj.2012.11.3767  0.585
2012 Akerboom J, Chen TW, Wardill TJ, Tian L, Marvin JS, Mutlu S, Calderón NC, Esposti F, Borghuis BG, Sun XR, Gordus A, Orger MB, Portugues R, Engert F, Macklin JJ, et al. Optimization of a GCaMP calcium indicator for neural activity imaging. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 13819-40. PMID 23035093 DOI: 10.1523/Jneurosci.2601-12.2012  0.817
2012 Petreanu L, Gutnisky DA, Huber D, Xu NL, O'Connor DH, Tian L, Looger L, Svoboda K. Activity in motor-sensory projections reveals distributed coding in somatosensation. Nature. 489: 299-303. PMID 22922646 DOI: 10.1038/Nature11321  0.757
2012 Tian L, Hires SA, Looger LL. Imaging neuronal activity with genetically encoded calcium indicators. Cold Spring Harbor Protocols. 2012: 647-56. PMID 22661439 DOI: 10.1101/Pdb.Top069609  0.805
2012 Huber D, Gutnisky DA, Peron S, O'Connor DH, Wiegert JS, Tian L, Oertner TG, Looger LL, Svoboda K. Multiple dynamic representations in the motor cortex during sensorimotor learning. Nature. 484: 473-8. PMID 22538608 DOI: 10.1038/Nature11039  0.76
2012 Tian L, Yang Y, Wysocki LM, Arnold AC, Hu A, Ravichandran B, Sternson SM, Looger LL, Lavis LD. Selective esterase-ester pair for targeting small molecules with cellular specificity. Proceedings of the National Academy of Sciences of the United States of America. 109: 4756-61. PMID 22411832 DOI: 10.1073/Pnas.1111943109  0.561
2012 Zariwala HA, Borghuis BG, Hoogland TM, Madisen L, Tian L, De Zeeuw CI, Zeng H, Looger LL, Svoboda K, Chen TW. A Cre-dependent GCaMP3 reporter mouse for neuronal imaging in vivo. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 3131-41. PMID 22378886 DOI: 10.1523/Jneurosci.4469-11.2012  0.758
2012 Tian L, Akerboom J, Schreiter ER, Looger LL. Neural activity imaging with genetically encoded calcium indicators. Progress in Brain Research. 196: 79-94. PMID 22341322 DOI: 10.1016/B978-0-444-59426-6.00005-7  0.628
2012 Xiong F, Lin Y, Han Z, Shi G, Tian L, Wu X, Zeng Q, Zhou Y, Deng J, Chen H. Plk1-mediated phosphorylation of UAP56 regulates the stability of UAP56. Molecular Biology Reports. 39: 1935-42. PMID 21637952 DOI: 10.1007/s11033-011-0940-x  0.365
2011 Cheng XB, Lei DL, Li YP, Tian L, Liu YP, Feng XH, Hu XG, Sun MY, Ma Q, Mao TQ, Liu BL, Zhao YM, Feng ZH, Xu LX, Zhang H, et al. Surgical treatment of a giant neurofibroma. The Journal of Craniofacial Surgery. 22: 2244-6. PMID 22075824 DOI: 10.1097/SCS.0b013e31823270cb  0.393
2011 Borghuis BG, Tian L, Xu Y, Nikonov SS, Vardi N, Zemelman BV, Looger LL. Imaging light responses of targeted neuron populations in the rodent retina. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 2855-67. PMID 21414907 DOI: 10.1523/Jneurosci.6064-10.2011  0.651
2010 Knöpfel T, Lin MZ, Levskaya A, Tian L, Lin JY, Boyden ES. Toward the second generation of optogenetic tools. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 14998-5004. PMID 21068304 DOI: 10.1523/Jneurosci.4190-10.2010  0.354
2010 Dombeck DA, Harvey CD, Tian L, Looger LL, Tank DW. Functional imaging of hippocampal place cells at cellular resolution during virtual navigation. Nature Neuroscience. 13: 1433-40. PMID 20890294 DOI: 10.1038/Nn.2648  0.779
2009 Tian L, Hires SA, Mao T, Huber D, Chiappe ME, Chalasani SH, Petreanu L, Akerboom J, McKinney SA, Schreiter ER, Bargmann CI, Jayaraman V, Svoboda K, Looger LL. Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators. Nature Methods. 6: 875-81. PMID 19898485 DOI: 10.1038/Nmeth.1398  0.796
2009 Shen M, Chapman RS, Vermeulen R, Tian L, Zheng T, Chen BE, Engels EA, He X, Blair A, Lan Q. Coal use, stove improvement, and adult pneumonia mortality in Xuanwei, China: a retrospective cohort study. Environmental Health Perspectives. 117: 261-6. PMID 19270797 DOI: 10.1289/Ehp.11521  0.452
2009 Akerboom J, Rivera JD, Guilbe MM, Malavé EC, Hernandez HH, Tian L, Hires SA, Marvin JS, Looger LL, Schreiter ER. Crystal structures of the GCaMP calcium sensor reveal the mechanism of fluorescence signal change and aid rational design. The Journal of Biological Chemistry. 284: 6455-64. PMID 19098007 DOI: 10.1074/Jbc.M807657200  0.779
2008 Tian L, Looger LL. Genetically encoded fluorescent sensors for studying healthy and diseased nervous systems. Drug Discovery Today. Disease Models. 5: 27-35. PMID 19461949 DOI: 10.1016/J.Ddmod.2008.07.003  0.649
2008 Grunditz A, Holbro N, Tian L, Zuo Y, Oertner TG. Spine neck plasticity controls postsynaptic calcium signals through electrical compartmentalization. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 28: 13457-66. PMID 19074019 DOI: 10.1523/Jneurosci.2702-08.2008  0.612
2008 Hires SA, Tian L, Looger LL. Reporting neural activity with genetically encoded calcium indicators. Brain Cell Biology. 36: 69-86. PMID 18941901 DOI: 10.1007/S11068-008-9029-4  0.791
2007 Kang H, Tian L, Son YJ, Zuo Y, Procaccino D, Love F, Hayworth C, Trachtenberg J, Mikesh M, Sutton L, Ponomareva O, Mignone J, Enikolopov G, Rimer M, Thompson W. Regulation of the intermediate filament protein nestin at rodent neuromuscular junctions by innervation and activity. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 27: 5948-57. PMID 17537965 DOI: 10.1523/Jneurosci.0621-07.2007  0.444
2004 Yu WD, Liang R, Shen H, Tian L, Yang LJ, Guo JZ. [The expression profiles of human chromosome 21 orthologues in mouse M II oocyte]. Zhonghua Yi Xue Za Zhi. 84: 1509-12. PMID 15500709  0.397
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