Elisha Haas - Publications

Biophysics Bar-Ilan University, Jerusalem, Jerusalem District, Israel 
self-assembly of protein structures, the second genetic code, and the dynamics and mechanisms of function proteins and nucleic acids

78 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Rahamim G, Amir D, Haas E. Simultaneous Determination of Two Subdomain Folding Rates Using the "Transfer-Quench" Method. Biophysical Journal. 112: 1786-1796. PMID 28494950 DOI: 10.1016/j.bpj.2017.01.037  0.64
2015 Rahamim G, Chemerovski-Glikman M, Rahimipour S, Amir D, Haas E. Resolution of Two Sub-Populations of Conformers and Their Individual Dynamics by Time Resolved Ensemble Level FRET Measurements. Plos One. 10: e0143732. PMID 26699718 DOI: 10.1371/journal.pone.0143732  0.96
2015 Orevi T, Rahamim G, Amir D, Kathuria S, Bilsel O, Matthews CR, Haas E. Sequential Closure of Loop Structures Forms the Folding Nucleus during the Refolding Transition of the Escherichia coli Adenylate Kinase Molecule. Biochemistry. PMID 26666584 DOI: 10.1021/acs.biochem.5b00849  0.96
2014 Orevi T, Ben Ishay E, Gershanov SL, Dalak MB, Amir D, Haas E. Fast closure of N-terminal long loops but slow formation of β strands precedes the folding transition state of Escherichia coli adenylate kinase. Biochemistry. 53: 3169-78. PMID 24787383 DOI: 10.1021/bi500069w  0.96
2014 Lerner E, Orevi T, Ben Ishay E, Amir D, Haas E. Kinetics of fast changing intramolecular distance distributions obtained by combined analysis of FRET efficiency kinetics and time-resolved FRET equilibrium measurements. Biophysical Journal. 106: 667-76. PMID 24507607 DOI: 10.1016/j.bpj.2013.11.4500  0.96
2014 Orevi T, Lerner E, Rahamim G, Amir D, Haas E. Ensemble and single-molecule detected time-resolved FRET methods in studies of protein conformations and dynamics. Methods in Molecular Biology (Clifton, N.J.). 1076: 113-69. PMID 24108626 DOI: 10.1007/978-1-62703-649-8_7  0.96
2013 Orevi T, Rahamim G, Hazan G, Amir D, Haas E. The loop hypothesis: contribution of early formed specific non-local interactions to the determination of protein folding pathways. Biophysical Reviews. 5: 85-98. PMID 28510159 DOI: 10.1007/s12551-013-0113-3  0.64
2013 Nag S, Sarkar B, Chandrakesan M, Abhyanakar R, Bhowmik D, Kombrabail M, Dandekar S, Lerner E, Haas E, Maiti S. A folding transition underlies the emergence of membrane affinity in amyloid-β. Physical Chemistry Chemical Physics : Pccp. 15: 19129-33. PMID 24121316 DOI: 10.1039/c3cp52732h  0.96
2013 Lerner E, Hilzenrat G, Amir D, Tauber E, Garini Y, Haas E. Preparation of homogeneous samples of double-labelled protein suitable for single-molecule FRET measurements. Analytical and Bioanalytical Chemistry. 405: 5983-91. PMID 23649926 DOI: 10.1007/s00216-013-7002-2  0.96
2013 Orevi T, Rahamim G, Hazan G, Amir D, Haas E. The loop hypothesis: Contribution of early formed specific non-local interactions to the determination of protein folding pathways Biophysical Reviews. 5: 85-98. DOI: 10.1007/s12551-013-0113-3  0.96
2012 Ishay EB, Hazan G, Rahamim G, Amir D, Haas E. An instrument for fast acquisition of fluorescence decay curves at picosecond resolution designed for "double kinetics" experiments: application to fluorescence resonance excitation energy transfer study of protein folding. The Review of Scientific Instruments. 83: 084301. PMID 22938314 DOI: 10.1063/1.4737632  0.96
2012 Ben Ishay E, Rahamim G, Orevi T, Hazan G, Amir D, Haas E. Fast subdomain folding prior to the global refolding transition of E. coli adenylate kinase: a double kinetics study. Journal of Molecular Biology. 423: 613-23. PMID 22898349 DOI: 10.1016/j.jmb.2012.08.001  0.96
2012 Haas E. Ensemble FRET methods in studies of intrinsically disordered proteins. Methods in Molecular Biology (Clifton, N.J.). 895: 467-98. PMID 22760335 DOI: 10.1007/978-1-61779-927-3_28  0.96
2011 Phillips NB, Racca J, Chen YS, Singh R, Jancso-Radek A, Radek JT, Wickramasinghe NP, Haas E, Weiss MA. Mammalian testis-determining factor SRY and the enigma of inherited human sex reversal: frustrated induced fit in a bent protein-DNA complex. The Journal of Biological Chemistry. 286: 36787-807. PMID 21849498 DOI: 10.1074/jbc.M111.260091  0.96
2011 Nagarajan S, Amir D, Grupi A, Goldenberg DP, Minton AP, Haas E. Modulation of functionally significant conformational equilibria in adenylate kinase by high concentrations of trimethylamine oxide attributed to volume exclusion. Biophysical Journal. 100: 2991-9. PMID 21689533 DOI: 10.1016/j.bpj.2011.03.065  0.96
2011 Ulman A, Ioffe M, Patolsky F, Haas E, Reuvenov D. Highly active engineered-enzyme oriented monolayers: formation, characterization and sensing applications. Journal of Nanobiotechnology. 9: 26. PMID 21689418 DOI: 10.1186/1477-3155-9-26  0.96
2011 Grupi A, Haas E. Time-resolved FRET detection of subtle temperature-induced conformational biases in ensembles of α-synuclein molecules. Journal of Molecular Biology. 411: 234-47. PMID 21570984 DOI: 10.1016/j.jmb.2011.04.056  0.96
2011 Grupi A, Haas E. Segmental conformational disorder and dynamics in the intrinsically disordered protein α-synuclein and its chain length dependence. Journal of Molecular Biology. 405: 1267-83. PMID 21108951 DOI: 10.1016/j.jmb.2010.11.011  0.96
2009 Huang F, Rajagopalan S, Settanni G, Marsh RJ, Armoogum DA, Nicolaou N, Bain AJ, Lerner E, Haas E, Ying L, Fersht AR. Multiple conformations of full-length p53 detected with single-molecule fluorescence resonance energy transfer Proceedings of the National Academy of Sciences of the United States of America. 106: 20758-20763. PMID 19933326 DOI: 10.1073/pnas.0909644106  0.96
2009 Huang F, Lerner E, Sato S, Amir D, Haas E, Fersht AR. Time-resolved fluorescence resonance energy transfer study shows a compact denatured state of the b domain of protein A Biochemistry. 48: 3468-3476. PMID 19222162 DOI: 10.1021/bi801890w  0.96
2009 Orevi T, Ben Ishay E, Pirchi M, Jacob MH, Amir D, Haas E. Early closure of a long loop in the refolding of adenylate kinase: a possible key role of non-local interactions in the initial folding steps. Journal of Molecular Biology. 385: 1230-42. PMID 19013178 DOI: 10.1016/j.jmb.2008.10.077  0.64
2008 Haas E. Folding on the assembly line. Acs Chemical Biology. 3: 527-9. PMID 18803369 DOI: 10.1021/cb800216n  0.96
2008 Sherman E, Itkin A, Kuttner YY, Rhoades E, Amir D, Haas E, Haran G. Using fluorescence correlation spectroscopy to study conformational changes in denatured proteins. Biophysical Journal. 94: 4819-27. PMID 18326651 DOI: 10.1529/biophysj.107.120220  0.96
2008 Haas E. Fluorescence Resonance Energy Transfer (FRET) and Single Molecule Fluorescence Detection Studies of the Mechanism of Protein Folding and Unfolding Protein Folding Handbook. 2: 573-633. DOI: 10.1002/9783527619498.ch17  0.96
2006 Magg C, Kubelka J, Holtermann G, Haas E, Schmid FX. Specificity of the Initial Collapse in the Folding of the Cold Shock Protein Journal of Molecular Biology. 360: 1067-1080. PMID 16815441 DOI: 10.1016/j.jmb.2006.05.073  0.96
2006 Li B, Phillips NB, Jancso-Radek A, Ittah V, Singh R, Jones DN, Haas E, Weiss MA. SRY-directed DNA bending and human sex reversal: reassessment of a clinical mutation uncovers a global coupling between the HMG box and its tail. Journal of Molecular Biology. 360: 310-28. PMID 16762365 DOI: 10.1016/j.jmb.2006.04.048  0.96
2006 Phillips NB, Jancso-Radek A, Ittah V, Singh R, Chan G, Haas E, Weiss MA. SRY and human sex determination: the basic tail of the HMG box functions as a kinetic clamp to augment DNA bending. Journal of Molecular Biology. 358: 172-92. PMID 16504207 DOI: 10.1016/j.jmb.2006.01.060  0.96
2005 Jacob MH, Amir D, Ratner V, Gussakowsky E, Haas E. Predicting reactivities of protein surface cysteines as part of a strategy for selective multiple labeling. Biochemistry. 44: 13664-72. PMID 16229456 DOI: 10.1021/bi051205t  0.96
2005 Haas E. The study of protein folding and dynamics by determination of intramolecular distance distributions and their fluctuations using ensemble and single-molecule FRET measurements. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 6: 858-70. PMID 15884068 DOI: 10.1002/cphc.200400617  0.96
2004 Ittah V, Kahana E, Amir D, Haas E. Applications of time-resolved resonance energy transfer measurements in studies of the molecular crowding effect. Journal of Molecular Recognition : Jmr. 17: 448-55. PMID 15362104 DOI: 10.1002/jmr.702  0.96
2004 Phillips NB, Nikolskaya T, Jancso-Radek A, Ittah V, Jiang F, Singh R, Haas E, Weiss MA. Sry-directed sex reversal in transgenic mice is robust with respect to enhanced DNA bending: comparison of human and murine HMG boxes. Biochemistry. 43: 7066-81. PMID 15170344 DOI: 10.1021/bi049920a  0.96
2003 Kaplan B, Ratner V, Haas E. Alpha-synuclein: its biological function and role in neurodegenerative diseases. Journal of Molecular Neuroscience : Mn. 20: 83-92. PMID 12794302 DOI: 10.1385/JMN:20:2:83  0.96
2002 Navon A, Ittah V, Scheraga HA, Haas E. Formation of the hydrophobic core of ribonuclease A through sequential coordinated conformational transitions. Biochemistry. 41: 14225-31. PMID 12450386 DOI: 10.1021/bi020506p  0.96
2002 Ratner V, Kahana E, Eichler M, Haas E. A general strategy for site-specific double labeling of globular proteins for kinetic FRET studies Bioconjugate Chemistry. 13: 1163-1170. PMID 12236801 DOI: 10.1021/bc025537b  0.96
2002 Ratner V, Kahana E, Haas E. The natively helical chain segment 169-188 of Escherichia coli adenylate kinase is formed in the latest phase of the refolding transition Journal of Molecular Biology. 320: 1135-1145. PMID 12126631 DOI: 10.1016/S0022-2836(02)00520-X  0.96
2001 Chakraborty S, Ittah V, Bai P, Luo L, Haas E, Peng ZY. Structure and dynamics of the α-lactalbumin molten globule: Fluorescence studies using proteins containing a single tryptophan residue Biochemistry. 40: 7228-7238. PMID 11401570 DOI: 10.1021/bi010004w  0.96
2001 Navon A, Ittah V, Landsman P, Scheraga HA, Haas E. Distributions of intramolecular distances in the reduced and denatured states of bovine pancreatic ribonuclease A. Folding initiation structures in the C-terminal portions of the reduced protein. Biochemistry. 40: 105-18. PMID 11141061 DOI: 10.1021/bi001946o  0.96
2001 Navon A, Ittah V, Laity JH, Scheraga HA, Haas E, Gussakovsky EE. Local and long-range interactions in the thermal unfolding transition of bovine pancreatic ribonuclease A. Biochemistry. 40: 93-104. PMID 11141060 DOI: 10.1021/bi001945w  0.96
2000 Ratner V, Sinev M, Haas E. Determination of intramolecular distance distribution during protein folding on the millisecond timescale Journal of Molecular Biology. 299: 1363-1371. PMID 10873459  0.96
2000 Sinev M, Landsmann P, Sineva E, Ittah V, Haas E. Design consideration and probes for fluorescence resonance energy transfer studies Bioconjugate Chemistry. 11: 352-362. PMID 10821651 DOI: 10.1021/bc990132l  0.96
1999 Gakamsky DM, Davis DM, Haas E, Strominger JL, Pecht I. Photophysical analysis of class I major histocompatibility complex protein assembly using a xanthene-derivatized β2-microglobulin Biophysical Journal. 76: 1552-1560. PMID 10049335 DOI: 10.1016/S0006-3495(99)77314-5  0.96
1998 Ratner V, Haas E. An instrument for time resolved monitoring of fast chemical transitions: Application to the kinetics of refolding of a globular protein Review of Scientific Instruments. 69: 2147-2154.  0.96
1996 Sinev MA, Sineva EV, Ittah V, Haas E. Towards a mechanism of AMP-substrate inhibition in adenylate kinase from Escherichia coli Febs Letters. 397: 273-276. PMID 8955362 DOI: 10.1016/S0014-5793(96)01195-7  0.96
1996 Sinev MA, Sineva EV, Ittah V, Haas E. Domain closure in adenylate kinase Biochemistry. 35: 6425-6437. PMID 8639589 DOI: 10.1021/bi952687j  0.96
1996 Barenholz Y, Cohen T, Haas E, Ottolenghi M. Lateral organization of pyrene-labeled lipids in bilayers as determined from the deviation from equilibrium between pyrene monomers and excimers Journal of Biological Chemistry. 271: 3085-3090. PMID 8621705 DOI: 10.1074/jbc.271.6.3085  0.96
1996 Haas E. The problem of protein folding and dynamics: Time-resolved dynamic nonradiative excitation energy transfer measurements Ieee Journal On Selected Topics in Quantum Electronics. 2: 1088-1106. DOI: 10.1109/2944.577340  0.96
1995 Gussakovsky EE, Haas E. Two steps in the transition between the native and acid states of bovine α-lactalbumin detected by circular polarization of luminescence: Evidence for a premolten globule state? Protein Science. 4: 2319-2326. PMID 8563628  0.96
1995 Buckler DR, Haas E, Scheraga HA. Analysis of the structure of ribonuclease A in native and partially denatured states by time-resolved noradiative dynamic excitation energy transfer between site-specific extrinsic probes. Biochemistry. 34: 15965-78. PMID 8519753 DOI: 10.1021/bi00049a011  0.96
1995 Gakamsky DM, Haas E, Robbins P, Strominger JL, Pecht I. Selective steady-state and time-resolved fluorescence spectroscopy of an HLA-A2-peptide complex Immunology Letters. 44: 195-201. PMID 7797251 DOI: 10.1016/0165-2478(94)00214-C  0.96
1994 Dittes K, Gakamsky DM, Haran G, Haas E, Ojcius DM, Kourilsky P, Pecht I. Picosecond fluorescence spectroscopy of a single-chain class I major histocompatibility complex encoded protein in its peptide loaded and unloaded states. Immunology Letters. 40: 125-32. PMID 8088870 DOI: 10.1016/0165-2478(94)90183-X  0.96
1994 Haran G, Haas E, Rapaport DC. Molecular dynamics simulations of simple peptide models: Solvent effects and comparison with experiment Journal of Physical Chemistry. 98: 10294-10302.  0.96
1993 Buckler DR, Haas E, Scheraga HA. C-terminal labeling of ribonuclease A with an extrinsic fluorescent probe by carboxypeptidase Y-catalyzed transpeptidation in the presence of urea. Analytical Biochemistry. 209: 20-31. PMID 8465956 DOI: 10.1006/abio.1993.1078  0.96
1993 Forster Y, Haas E. Preparation and characterization of three fluorescent labels for proteins, suitable for structural studies Analytical Biochemistry. 209: 9-14. PMID 7682038 DOI: 10.1006/abio.1993.1076  0.96
1992 Haran G, Haas E, Szpikowska BK, Mas MT. Domain motions in phosphoglycerate kinase: determination of interdomain distance distributions by site-specific labeling and time-resolved fluorescence energy transfer. Proceedings of the National Academy of Sciences of the United States of America. 89: 11764-8. PMID 1465395  0.96
1992 Scheraga HA, Beals JM, Buckler DR, Haas E, Krausz S. Structure and dynamics of chain-folding initiation sites in ribonuclease A Proceedings of Spie - the International Society For Optical Engineering. 1640: 672-675.  0.96
1990 Homma K, Haas E, Hastings JW. Phase of the circadian clock is accurately transferred from mother to daughter cells in the dinoflagellate Gonyaulax polyedra. Cell Biophysics. 16: 85-97. PMID 1691687 DOI: 10.1007/BF02989694  0.96
1989 Beechem JM, Haas E. Simultaneous determination of intramolecular distance distributions and conformational dynamics by global analysis of energy transfer measurements Biophysical Journal. 55: 1225-1236. PMID 2765658  0.96
1989 Haas E. Folding and dynamics of globular proteins studied by time resolved fluorescence spectroscopy Progress in Clinical and Biological Research. 289: 157-170. PMID 2726797  0.96
1988 Haas E, McWherter CA, Scheraga HA. Conformational unfolding in the N-terminal region of ribonuclease A detected by nonradiative energy transfer: distribution of interresidue distances in the native, denatured, and reduced-denatured states Biopolymers - Peptide Science Section. 27: 1-21. PMID 3342273 DOI: 10.1002/bip.360270102  0.96
1988 Amir D, Haas E. Reduced bovine pancreatic trypsin inhibitor has a compact structure Biochemistry. 27: 8889-8893. PMID 2466482  0.96
1987 Haas E, Montelione GT, McWherter CA, Scheraga HA. Local structure in a tryptic fragment of performic acid oxidized ribonuclease A corresponding to a proposed polypeptide chain-folding initiation site detected by tyrosine fluorescence lifetime and proton magnetic resonance measurements Biochemistry. 26: 1672-1683. PMID 3593685 DOI: 10.1021/bi00380a028  0.96
1987 Amir D, Haas E. Estimation of intramolecular distance distributions in Bovine Pancreatic Trypsin Inhibitor by site-specific labeling and nonradiative excitation energy-transfer measurements Biochemistry. 26: 2162-2175. PMID 2441742  0.96
1986 Amir D, Levy DP, Levin Y, Haas E. Selective fluorescent labeling of amino groups of bovine pancreatic trypsin inhibitor by reductive alkylation Biopolymers. 25: 1645-1658. PMID 2429713  0.96
1986 Amir D, Haas E. Determination of intramolecular distance distributions in a globular protein by nonradiative excitation energy transfer measurements Biopolymers. 25: 235-240. PMID 2420384  0.96
1986 Amir D, Haas E. A series of site-specific fluorescently labeled BPTI derivatives prepared by nonselective acylation and chromatographic separations International Journal of Peptide and Protein Research. 27: 7-17. PMID 2419267  0.96
1984 Ausio J, Greulich KO, Haas E, Wachtel E. Characterization of the fluorescence of the protamine thynnine and studies of binding to double-stranded DNA Biopolymers - Peptide Science Section. 23: 2559-2571. PMID 6518265  0.96
1984 Haas E, Steinberg IZ. Intramolecular dynamics of chain molecules monitored by fluctuations in efficiency of excitation energy transfer. A theoretical study. Biophysical Journal. 46: 429-37. PMID 6498263 DOI: 10.1016/S0006-3495(84)84040-0  0.96
1982 Good HP, Wild UP, Haas E, Fischer E, Resewitz EP, Lippert E. FLUORESCENCE LIFETIME OF TRANS-STILBENE AND ITS VARIATION WITH TEMPERATURE Berichte Der Bunsengesellschaft/Physical Chemistry Chemical Physics. 86: 126-129.  0.96
1980 Haas E. Bioluminescence from single bacterial cells exhibits no oscillation Biophysical Journal. 31: 301-312. PMID 6973368  0.96
1978 Haas E, Katchalski-Katzir E, Steinberg IZ. Effect of the orientation of donor and acceptor on the probability of energy transfer involving electronic transitions of mixed polarization. Biochemistry. 17: 5064-70. PMID 718874  0.96
1978 Haas E, Fischer G, Fischer E. Conformational equilibria in 1,2-diarylethylenes manifested in their emission spectra and lifetimes Journal of Physical Chemistry. 82: 1638-1643.  0.96
1978 Haas E, Fischer G, Fischer E. Emission-spectroscopic evidence for the existence of ground-state rotamers in trans-diarylethylenes Journal of Photochemistry. 9: 277-279.  0.96
1978 Haas E, Katchalski-Katzir E, Steinberg IZ. Brownian motion of the ends of oligopeptide chains in solution as estimated by energy transfer between the chain ends Biopolymers. 17: 11-31.  0.96
1976 Hazan G, Haas E, Steinberg IZ. The fluorescence decay of human serum albumin and its subfractions. Biochimica Et Biophysica Acta. 434: 144-53. PMID 938659 DOI: 10.1016/0005-2795(76)90044-1  0.96
1976 Silberstein BR, Malkin S, Haas E. A novel short-lived emission from the photosynthetic bacterium Rhodospirilum rubrum Febs Letters. 63: 299-303. PMID 816674 DOI: 10.1016/0014-5793(76)80116-0  0.96
1975 Haas E, Wilchek M, Katchalski-Katzir E, Steinberg IZ. Distribution of end-to-end distances of oligopeptides in solution as estimated by energy transfer. Proceedings of the National Academy of Sciences of the United States of America. 72: 1807-11. PMID 1057171 DOI: 10.1073/pnas.72.5.1807  0.96
1972 Grinvald A, Haas E, Steinberg IZ. Evaluation of the distribution of distances between energy donors and acceptors by fluorescence decay. Proceedings of the National Academy of Sciences of the United States of America. 69: 2273-7. PMID 16592008  0.8
1971 Haas E, Elkana Y, Kulka RG. A sensitive fluorometric assay for α-chymotrypsin Analytical Biochemistry. 40: 218-226. PMID 5550147 DOI: 10.1016/0003-2697(71)90095-9  0.96
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