Brian Richard Gibney, PhD - Publications

Affiliations: 
Chemistry Columbia University, New York, NY 
Area:
Bioinorganic Chemistry, Biophysical Chemistry

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Gibney BR. Equilibrium Studies of Designed Metalloproteins. Methods in Enzymology. 580: 417-38. PMID 27586343 DOI: 10.1016/Bs.Mie.2016.06.002  0.434
2015 Aussignargues C, Pandelia ME, Sutter M, Plegaria JS, Zarzycki J, Turmo A, Huang J, Ducat DC, Hegg EL, Gibney BR, Kerfeld CA. Structure and Function of a Bacterial Microcompartment Shell Protein Engineered to Bind a [4Fe-4S] Cluster. Journal of the American Chemical Society. PMID 26704697 DOI: 10.1021/Jacs.5B11734  0.409
2015 Reddi AR, Pawlowska M, Gibney BR. Evaluation of the Intrinsic Zn(II) Affinity of a Cys3His1 Site in the Absence of Protein Folding Effects. Inorganic Chemistry. 54: 5942-8. PMID 26016528 DOI: 10.1021/Acs.Inorgchem.5B00718  0.758
2014 Chan KL, Bakman I, Marts AR, Batir Y, Dowd TL, Tierney DL, Gibney BR. Characterization of the Zn(II) binding properties of the human Wilms' tumor suppressor protein C-terminal zinc finger peptide. Inorganic Chemistry. 53: 6309-20. PMID 24893204 DOI: 10.1021/Ic500862B  0.467
2008 Westerlund K, Moran SD, Privett HK, Hay S, Jarvet J, Gibney BR, Tommos C. Making a single-chain four-helix bundle for redox chemistry studies. Protein Engineering, Design & Selection : Peds. 21: 645-52. PMID 18755707 DOI: 10.1093/Protein/Gzn043  0.699
2008 Reedy CJ, Elvekrog MM, Gibney BR. Development of a heme protein structure-electrochemical function database. Nucleic Acids Research. 36: D307-13. PMID 17933771 DOI: 10.1093/Nar/Gkm814  0.798
2007 Thompson AM, Reddi AR, Shi X, Goldbeck RA, Moënne-Loccoz P, Gibney BR, Holman TR. Measurement of the heme affinity for yeast dap1p, and its importance in cellular function. Biochemistry. 46: 14629-37. PMID 18031064 DOI: 10.1021/Bi7013739  0.741
2007 Reddi AR, Guzman TR, Breece RM, Tierney DL, Gibney BR. Deducing the energetic cost of protein folding in zinc finger proteins using designed metallopeptides. Journal of the American Chemical Society. 129: 12815-27. PMID 17902663 DOI: 10.1021/Ja073902+  0.76
2007 Reddi AR, Gibney BR. Role of protons in the thermodynamic contribution of a Zn(II)-Cys4 site toward metalloprotein stability. Biochemistry. 46: 3745-58. PMID 17326664 DOI: 10.1021/Bi062253W  0.737
2007 Reddi AR, Reedy CJ, Mui S, Gibney BR. Thermodynamic investigation into the mechanisms of proton-coupled electron transfer events in heme protein maquettes. Biochemistry. 46: 291-305. PMID 17198400 DOI: 10.1021/Bi061607G  0.797
2006 Riley EA, Petros AK, Smith KA, Gibney BR, Tierney DL. Frequency-switching inversion-recovery for severely hyperfine-shifted NMR: evidence of asymmetric electron relaxation in high-spin Co(II). Inorganic Chemistry. 45: 10016-8. PMID 17140197 DOI: 10.1021/Ic061207H  0.745
2006 Petros AK, Reddi AR, Kennedy ML, Hyslop AG, Gibney BR. Femtomolar Zn(II) affinity in a peptide-based ligand designed to model thiolate-rich metalloprotein active sites. Inorganic Chemistry. 45: 9941-58. PMID 17140191 DOI: 10.1021/Ic052190Q  0.774
2006 Zhuang J, Reddi AR, Wang Z, Khodaverdian B, Hegg EL, Gibney BR. Evaluating the roles of the heme a side chains in cytochrome c oxidase using designed heme proteins. Biochemistry. 45: 12530-8. PMID 17029408 DOI: 10.1021/Bi060565T  0.777
2006 Hong J, Kharenko OA, Fan J, Xie F, Petros AK, Gibney BR, Ogawa MY. Evidence that a miniature CuI metalloprotein undergoes collisional electron transfer in the inverted Marcus region. Angewandte Chemie (International Ed. in English). 45: 6137-40. PMID 16927358 DOI: 10.1002/Anie.200601517  0.727
2006 Zhuang J, Amoroso JH, Kinloch R, Dawson JH, Baldwin MJ, Gibney BR. Evaluation of electron-withdrawing group effects on heme binding in designed proteins: implications for heme a in cytochrome c oxidase. Inorganic Chemistry. 45: 4685-94. PMID 16749832 DOI: 10.1021/Ic060072C  0.604
2006 Yu B, Edstrom WC, Benach J, Hamuro Y, Weber PC, Gibney BR, Hunt JF. Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB. Nature. 439: 879-84. PMID 16482161 DOI: 10.1038/Nature04561  0.349
2004 Zhuang J, Amoroso JH, Kinloch R, Dawson JH, Baldwin MJ, Gibney BR. Design of a five-coordinate heme protein maquette: a spectroscopic model of deoxymyoglobin. Inorganic Chemistry. 43: 8218-20. PMID 15606161 DOI: 10.1021/Ic048502R  0.639
2004 Petros AK, Shaner SE, Costello AL, Tierney DL, Gibney BR. Comparison of cysteine and penicillamine ligands in a Co(II) maquette. Inorganic Chemistry. 43: 4793-5. PMID 15285646 DOI: 10.1021/Ic0497679  0.783
2004 Kennedy ML, Petros AK, Gibney BR. Cobalt(II) and zinc(II) binding to a ferredoxin maquette. Journal of Inorganic Biochemistry. 98: 727-32. PMID 15134918 DOI: 10.1016/J.Jinorgbio.2004.01.002  0.772
2004 Reedy CJ, Gibney BR. Heme protein assemblies. Chemical Reviews. 104: 617-49. PMID 14871137 DOI: 10.1021/Cr0206115  0.781
2003 Reedy CJ, Kennedy ML, Gibney BR. Thermodynamic characterization of ferric and ferrous haem binding to a designed four-alpha-helix protein. Chemical Communications (Cambridge, England). 570-1. PMID 12669829 DOI: 10.1039/B211488G  0.794
2003 Huang SS, Gibney BR, Stayrook SE, Leslie Dutton P, Lewis M. X-ray structure of a maquette scaffold. Journal of Molecular Biology. 326: 1219-25. PMID 12589764 DOI: 10.1016/S0022-2836(02)01441-9  0.577
2003 Reedy CJ, Kennedy ML, Gibney BR. Thermodynamic characterization of ferric and ferrous haem binding to a designed four-α-helix protein Chemical Communications. 9: 570-571.  0.796
2002 Privett HK, Reedy CJ, Kennedy ML, Gibney BR. Nonnatural amino acid ligands in heme protein design. Journal of the American Chemical Society. 124: 6828-9. PMID 12059195 DOI: 10.1021/Ja025534+  0.809
2002 Kennedy ML, Gibney BR. Proton coupling to [4Fe-4S](2+/+) and [4Fe-4Se](2+/+) oxidation and reduction in a designed protein. Journal of the American Chemical Society. 124: 6826-7. PMID 12059194 DOI: 10.1021/Ja0171613  0.348
2002 Daugherty RG, Wasowicz T, Gibney BR, DeRose VJ. Design and spectroscopic characterization of peptide models for the plastocyanin copper-binding loop. Inorganic Chemistry. 41: 2623-32. PMID 12005485 DOI: 10.1021/Ic010555A  0.383
2002 Chen X, Discher BM, Pilloud DL, Gibney BR, Moser CC, Dutton PL. De novo design of a cytochrome b maquette for electron transfer and coupled reactions on electrodes Journal of Physical Chemistry B. 106: 617-624. DOI: 10.1021/Jp012185H  0.563
2001 Gibney BR, Huang SS, Skalicky JJ, Fuentes EJ, Wand AJ, Dutton PL. Hydrophobic modulation of heme properties in heme protein maquettes. Biochemistry. 40: 10550-61. PMID 11523997 DOI: 10.1021/bi002806h  0.619
2001 Kennedy ML, Gibney BR. Metalloprotein and redox protein design. Current Opinion in Structural Biology. 11: 485-90. PMID 11495743 DOI: 10.1016/S0959-440X(00)00237-2  0.411
2001 Kennedy ML, Silchenko S, Houndonougbo N, Gibney BR, Dutton PL, Rodgers KR, Benson DR. Model hemoprotein reduction potentials: the effects of histidine-to-iron coordination equilibrium. Journal of the American Chemical Society. 123: 4635-6. PMID 11457264 DOI: 10.1021/ja0156441  0.431
2001 Ugulava NB, Gibney BR, Jarrett JT. Biotin synthase contains two distinct iron-sulfur cluster binding sites: chemical and spectroelectrochemical analysis of iron-sulfur cluster interconversions. Biochemistry. 40: 8343-51. PMID 11444981 DOI: 10.1021/Bi0104625  0.307
2001 Grosset AM, Gibney BR, Rabanal F, Moser CC, Dutton PL. Proof of principle in a de novo designed protein maquette: an allosterically regulated, charge-activated conformational switch in a tetra-alpha-helix bundle. Biochemistry. 40: 5474-87. PMID 11331012 DOI: 10.1021/Bi002504F  0.787
2000 Shifman JM, Gibney BR, Sharp RE, Dutton PL. Heme redox potential control in de novo designed four-alpha-helix bundle proteins. Biochemistry. 39: 14813-21. PMID 11101297 DOI: 10.1021/bi000927b  0.558
2000 Gibney BR, Isogai Y, Rabanal F, Reddy KS, Grosset AM, Moser CC, Dutton PL. Self-assembly of heme A and heme B in a designed four-helix bundle: implications for a cytochrome c oxidase maquette. Biochemistry. 39: 11041-9. PMID 10998241 DOI: 10.1021/Bi000925R  0.782
2000 Ugulava NB, Gibney BR, Jarrett JT. Iron-sulfur cluster interconversions in biotin synthase: dissociation and reassociation of iron during conversion of [2Fe-2S] to [4Fe-4S] clusters. Biochemistry. 39: 5206-14. PMID 10819988 DOI: 10.1021/Bi9926227  0.318
2000 Gibney BR, Dutton PL. De novo design and synthesis of heme proteins Advances in Inorganic Chemistry. 51: 409-456. DOI: 10.1016/S0898-8838(00)51008-3  0.571
1999 Sharp RE, Palmitessa A, Gibney BR, Moser CC, Dutton PL. Probing the ubihydroquinone primary energy conversion site in the Rhodobacter capsulatus cytochrome bc1 complex. Biochemical Society Transactions. 27: 572-6. PMID 10917644 DOI: 10.1042/Bst0270572  0.475
1999 Sharp RE, Moser CC, Gibney BR, Dutton PL. Primary steps in the energy conversion reaction of the cytochrome bc1 complex Qo site. Journal of Bioenergetics and Biomembranes. 31: 225-33. PMID 10591528 DOI: 10.1023/A:1005467628660  0.476
1999 Sharp RE, Gibney BR, Palmitessa A, White JL, Dixon JA, Moser CC, Daldal F, Dutton PL. Effect of inhibitors on the ubiquinone binding capacity of the primary energy conversion site in the Rhodobacter capsulatus cytochrome bc(1) complex. Biochemistry. 38: 14973-80. PMID 10555979 DOI: 10.1021/bi9914863  0.43
1999 Gibney BR, Dutton PL. Histidine placement in de novo-designed heme proteins. Protein Science : a Publication of the Protein Society. 8: 1888-98. PMID 10493590 DOI: 10.1110/Ps.8.9.1888  0.597
1999 Mulholland SE, Gibney BR, Rabanal F, Dutton PL. Determination of nonligand amino acids critical to [4Fe-4S]2+/+ assembly in ferredoxin maquettes. Biochemistry. 38: 10442-8. PMID 10441139 DOI: 10.1021/Bi9908742  0.551
1999 Sharp RE, Palmitessa A, Gibney BR, White JL, Moser CC, Daldal F, Dutton PL. Ubiquinone binding capacity of the Rhodobacter capsulatus cytochrome bc1 complex: effect of diphenylamine, a weak binding QO site inhibitor. Biochemistry. 38: 3440-6. PMID 10079091 DOI: 10.1021/Bi982639+  0.529
1999 Sharp RE, Gibney BR, Palmitessa A, White JL, Moser CC, Dutton PL. Structure, Function and Dysfunction of the Cytochrome bc1 Complex Q0 Site: X-Ray Verses EPR Biochemical Society Transactions. 27: A81-A81. DOI: 10.1042/Bst027A081A  0.476
1999 Gibney BR, Rabanal F, Skalicky JJ, Wand AJ, Dutton PL. Iterative protein redesign Journal of the American Chemical Society. 121: 4952-4960. DOI: 10.1021/Ja9833117  0.554
1999 Skalicky JJ, Gibney BR, Rabanal F, Bieber Urbauer RJ, Dutton PL, Wand AJ. Solution structure of a designed four-α-helix bundle maquette scaffold Journal of the American Chemical Society. 121: 4941-4951. DOI: 10.1021/Ja983309F  0.5
1998 Valkova-Valchanova MB, Saribas AS, Gibney BR, Dutton PL, Daldal F. Isolation and characterization of a two-subunit cytochrome b-c1 subcomplex from Rhodobacter capsulatus and reconstitution of its ubihydroquinone oxidation (Qo) site with purified Fe-S protein subunit. Biochemistry. 37: 16242-51. PMID 9819216 DOI: 10.1021/Bi981651Z  0.579
1998 Sharp RE, Palmitessa A, Gibney BR, Moser CC, Daldal F, Dutton PL. Non-inhibiting perturbation of the primary energy conversion site (Qo site) in Rhodobacter capsulatus ubihydroquinone: cytochrome c oxidoreductase (cytochrome bc1 complex). Febs Letters. 431: 423-6. PMID 9714556 DOI: 10.1016/S0014-5793(98)00792-3  0.498
1998 Skalicky JJ, Bieber RJ, Gibney BR, Rabanal F, Dutton PL, Wand AJ. Sequence-specific resonance assignments for a designed four-alpha-helix bundle protein. Journal of Biomolecular Nmr. 11: 227-8. PMID 9679297 DOI: 10.1023/A:1008252110306  0.537
1998 Gibney BR, Rabanal F, Reddy KS, Dutton PL. Effect of four helix bundle topology on heme binding and redox properties. Biochemistry. 37: 4635-43. PMID 9521784 DOI: 10.1021/bi971856s  0.452
1998 Johansson JS, Gibney BR, Rabanal F, Reddy KS, Dutton PL. A designed cavity in the hydrophobic core of a four-alpha-helix bundle improves volatile anesthetic binding affinity. Biochemistry. 37: 1421-9. PMID 9477971 DOI: 10.1021/bi9721290  0.535
1998 Pilloud DL, Rabanal F, Gibney BR, Farid RS, Dutton PL, Moser CC. Self-assembled monolayers of synthetic hemoproteins on silanized quartz Journal of Physical Chemistry B. 102: 1926-1937. DOI: 10.1021/Jp973348Y  0.698
1998 Mulholland SE, Gibney BR, Rabanal F, Dutton PL. Characterization of the fundamental protein ligand requirements of [4Fe- 4S](2+/+) clusters with sixteen amino acid maquettes Journal of the American Chemical Society. 120: 10296-10302. DOI: 10.1021/Ja981279A  0.315
1998 Johansson JS, Gibney BR, Skalicky JJ, Wand AJ, Dutton PL. A native-like three-α-helix bundle protein from structure-based redesign: A novel maquette scaffold Journal of the American Chemical Society. 120: 3881-3886. DOI: 10.1021/Ja973538M  0.523
1997 Gibney BR, Rabanal F, Dutton PL. Synthesis of novel proteins. Current Opinion in Chemical Biology. 1: 537-42. PMID 9667893 DOI: 10.1016/S1367-5931(97)80050-6  0.581
1997 Gibney BR, Johansson JS, Rabanal F, Skalicky JJ, Wand AJ, Dutton PL. Global topology & stability and local structure & dynamics in a synthetic spin-labeled four-helix bundle protein. Biochemistry. 36: 2798-806. PMID 9062107 DOI: 10.1021/bi9618225  0.44
1997 Gibney BR, Rabanal F, Skalicky JJ, Wand AJ, Dutton PL. Design of a unique protein scaffold for maquettes Journal of the American Chemical Society. 119: 2323-2324. DOI: 10.1021/Ja963561S  0.602
1997 Pecoraro VL, Stemmler AJ, Gibney BR, Bodwin JJ, Wang H, Kampf JW, Barwinski A. Metallacrowns: A new class of molecular recognition agents Progress in Inorganic Chemistry. 45: 83-177. DOI: 10.1002/9780470166468.Ch2  0.736
1996 Gibney BR, Mulholland SE, Rabanal F, Dutton PL. Ferredoxin and ferredoxin-heme maquettes. Proceedings of the National Academy of Sciences of the United States of America. 93: 15041-6. PMID 8986760 DOI: 10.1073/Pnas.93.26.15041  0.548
1996 Gibney BR, Wang H, Kampf JW, Pecoraro VL. Structural Evaluation and Solution Integrity of Alkali Metal Salt Complexes of the Manganese 12-Metallacrown-4 (12-MC-4) Structural Type Inorganic Chemistry. 35: 6184-6193. DOI: 10.1021/Ic960371+  0.514
1996 Rabanal F, Gibney BR, DeGrado WF, Moser CC, Leslie Dutton P. Engineering photosynthesis: synthetic redox proteins Inorganica Chimica Acta. 243: 213-218. DOI: 10.1016/0020-1693(95)04910-X  0.366
1994 Gibney BR, Kessissoglou DP, Kampf JW, Pecoraro VL. Copper(II) 12-metallacrown-4: Synthesis, structure, ligand variability, and solution dynamics in the 12-MC-4 structural motif Inorganic Chemistry. 33: 4840-4849. DOI: 10.1021/Ic00100A006  0.525
1993 Lah MS, Gibney BR, Tierney DL, Penner-Hahn JE, Pecoraro VL. The fused metallacrown anion Na2{[Na0.5[Ga(salicylhydroximate)]4]2(.mu.2-OH)4}- is an inorganic analog of a cryptate Journal of the American Chemical Society. 115: 5857-5858. DOI: 10.1021/Ja00066A077  0.444
1993 Gibney BR, Stemmler AJ, Pilotek S, Kampf JW, Pecoraro VL. Generalizing the metallacrown analogy: Ligand variation and solution stability of the VvO 9-metallacrown-3 structure type Inorganic Chemistry. 32: 6008-6015. DOI: 10.1021/Ic00078A018  0.532
1993 Lah MS, Gibney BR, Tierney DL, Penner-Hahn JE, Pecoraro VL. The fused metallacrown anion Na2{[Na,0.5[Ga(salicylhydroximate)]4] 2(μ2-OH)4}- is an inorganic analogue of a cryptate Journal of the American Chemical Society. 115: 5857-5858.  0.377
1991 Pecoraro VL, Lah MS, Kessissoglou DP, Kampf J, Gibney B. Metallacrowns: A new class of metal binding agents Journal of Inorganic Biochemistry. 43: 148. DOI: 10.1016/0162-0134(91)84142-V  0.515
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