Year |
Citation |
Score |
2023 |
Reier K, Liiv A, Remme J. Ribosome Protein Composition Mediates Translation during the Stationary Phase. International Journal of Molecular Sciences. 24. PMID 36834540 DOI: 10.3390/ijms24043128 |
0.308 |
|
2022 |
Liljeruhm J, Leppik M, Bao L, Truu T, Calvo-Noriega M, Freyer NS, Liiv A, Wang J, Blanco RC, Ero R, Remme J, Forster AC. Plasticity and conditional essentiality of modification enzymes for domain V of Escherichia coli 23S ribosomal RNA. Rna (New York, N.Y.). PMID 35260421 DOI: 10.1261/rna.079096.121 |
0.339 |
|
2021 |
Kisly I, Kattel C, Remme J, Tamm T. Luciferase-based reporter system for in vitro evaluation of elongation rate and processivity of ribosomes. Nucleic Acids Research. PMID 33684199 DOI: 10.1093/nar/gkab121 |
0.329 |
|
2020 |
Lilleorg S, Reier K, Volõnkin P, Remme J, Liiv A. Phenotypic effects of paralogous ribosomal proteins bL31A and bL31B in E. coli. Scientific Reports. 10: 11682. PMID 32669635 DOI: 10.1038/S41598-020-68582-2 |
0.478 |
|
2020 |
Huang S, Aleksashin NA, Loveland AB, Klepacki D, Reier K, Kefi A, Szal T, Remme J, Jaeger L, Vázquez-Laslop N, Korostelev AA, Mankin AS. Ribosome engineering reveals the importance of 5S rRNA autonomy for ribosome assembly. Nature Communications. 11: 2900. PMID 32518240 DOI: 10.1038/S41467-020-16694-8 |
0.43 |
|
2019 |
Tamm T, Kisly I, Remme J. Functional Interactions of Ribosomal Intersubunit Bridges in . Genetics. PMID 31649153 DOI: 10.1534/Genetics.119.302777 |
0.464 |
|
2019 |
Aleksashin NA, Leppik M, Hockenberry AJ, Klepacki D, Vázquez-Laslop N, Jewett MC, Remme J, Mankin AS. Assembly and functionality of the ribosome with tethered subunits. Nature Communications. 10: 930. PMID 30804338 DOI: 10.1038/S41467-019-08892-W |
0.387 |
|
2019 |
Ainelo A, Porosk R, Kilk K, Rosendahl S, Remme J, Hõrak R. Responds to the Toxin GraT by Inducing Ribosome Biogenesis Factors and Repressing TCA Cycle Enzymes. Toxins. 11. PMID 30744127 DOI: 10.3390/Toxins11020103 |
0.42 |
|
2019 |
Tamm T, Kisly I, Remme J. Supplemental Material for Tamm, Kisly, and Remme, 2019 Genetics. DOI: 10.25386/Genetics.9995402.V1 |
0.357 |
|
2018 |
Kisly I, Remme J, Tamm T. Ribosomal protein eL24, involved in two intersubunit bridges, stimulates translation initiation and elongation. Nucleic Acids Research. PMID 30407570 DOI: 10.1093/Nar/Gky1083 |
0.5 |
|
2018 |
Lilleorg S, Reier K, Pulk A, Liiv A, Tammsalu T, Peil L, Cate JD, Remme J. Bacterial ribosome heterogeneity: Changes in ribosomal protein composition during transition into stationary growth phase. Biochimie. 156: 169-180. PMID 30359641 DOI: 10.2210/Pdb6I7V/Pdb |
0.472 |
|
2017 |
O'Connor M, Leppik M, Remme J. Pseudouridine-Free Escherichia coli Ribosomes. Journal of Bacteriology. PMID 29180357 DOI: 10.1128/Jb.00540-17 |
0.492 |
|
2017 |
Leppik M, Liiv A, Remme J. Random pseuoduridylation in vivo reveals critical region of Escherichia coli 23S rRNA for ribosome assembly. Nucleic Acids Research. 45: 6098-6108. PMID 28334881 DOI: 10.1093/Nar/Gkx160 |
0.539 |
|
2017 |
Lilleorg S, Reier K, Remme J, Liiv A. The Intersubunit Bridge B1b of the Bacterial Ribosome Facilitates Initiation of Protein Synthesis and Maintenance of Translational Fidelity. Journal of Molecular Biology. 429: 1067-1080. PMID 28238762 DOI: 10.1016/J.Jmb.2017.02.015 |
0.531 |
|
2017 |
Mets T, Lippus M, Schryer D, Liiv A, Kasari V, Paier A, Maiväli Ü, Remme J, Tenson T, Kaldalu N. Toxins MazF and MqsR cleave Escherichia coli rRNA precursors at multiple sites. Rna Biology. 14: 124-135. PMID 27858580 DOI: 10.1080/15476286.2016.1259784 |
0.501 |
|
2016 |
Kisly I, Gulay SP, Mäeorg U, Dinman JD, Remme J, Tamm T. The functional role of eL19 and eB12 intersubunit bridge in the eukaryotic ribosome. Journal of Molecular Biology. PMID 27038511 DOI: 10.1016/J.Jmb.2016.03.023 |
0.636 |
|
2016 |
Ainelo A, Tamman H, Leppik M, Remme J, Hõrak R. The toxin GraT inhibits ribosome biogenesis. Molecular Microbiology. 100: 719-34. PMID 26833678 DOI: 10.1111/Mmi.13344 |
0.454 |
|
2014 |
Starosta AL, Lassak J, Peil L, Atkinson GC, Woolstenhulme CJ, Virumäe K, Buskirk A, Tenson T, Remme J, Jung K, Wilson DN. A conserved proline triplet in Val-tRNA synthetase and the origin of elongation factor P. Cell Reports. 9: 476-83. PMID 25310979 DOI: 10.1016/J.Celrep.2014.09.008 |
0.387 |
|
2014 |
Starosta AL, Lassak J, Peil L, Atkinson GC, Virumäe K, Tenson T, Remme J, Jung K, Wilson DN. Translational stalling at polyproline stretches is modulated by the sequence context upstream of the stall site. Nucleic Acids Research. 42: 10711-9. PMID 25143529 DOI: 10.1093/Nar/Gku768 |
0.402 |
|
2014 |
Piir K, Tamm T, Kisly I, Tammsalu T, Remme J. Stepwise splitting of ribosomal proteins from yeast ribosomes by LiCl. Plos One. 9: e101561. PMID 24991888 DOI: 10.1371/Journal.Pone.0101561 |
0.437 |
|
2013 |
Peil L, Starosta AL, Lassak J, Atkinson GC, Virumäe K, Spitzer M, Tenson T, Jung K, Remme J, Wilson DN. Distinct XPPX sequence motifs induce ribosome stalling, which is rescued by the translation elongation factor EF-P. Proceedings of the National Academy of Sciences of the United States of America. 110: 15265-70. PMID 24003132 DOI: 10.1073/Pnas.1310642110 |
0.4 |
|
2013 |
Samhita L, Virumäe K, Remme J, Varshney U. Initiation with Elongator tRNAs Journal of Bacteriology. 195: 4202-4209. PMID 23852868 DOI: 10.1128/Jb.00637-13 |
0.453 |
|
2012 |
Peil L, Starosta AL, Virumäe K, Atkinson GC, Tenson T, Remme J, Wilson DN. Lys34 of translation elongation factor EF-P is hydroxylated by YfcM. Nature Chemical Biology. 8: 695-7. PMID 22706199 DOI: 10.1038/Nchembio.1001 |
0.347 |
|
2012 |
Leppik M, Ero R, Liiv A, Kipper K, Remme J. Different sensitivity of H69 modification enzymes RluD and RlmH to mutations in Escherichia coli 23S rRNA. Biochimie. 94: 1080-9. PMID 22586702 DOI: 10.1016/J.Biochi.2012.02.023 |
0.408 |
|
2011 |
Remme J. How to avoid undesirable interactions during ribosome assembly? Molecular Microbiology. 82: 269-71. PMID 21923767 DOI: 10.1111/J.1365-2958.2011.07838.X |
0.484 |
|
2011 |
Siibak T, Peil L, Dönhöfer A, Tats A, Remm M, Wilson DN, Tenson T, Remme J. Antibiotic-induced ribosomal assembly defects result from changes in the synthesis of ribosomal proteins. Molecular Microbiology. 80: 54-67. PMID 21320180 DOI: 10.1111/J.1365-2958.2011.07555.X |
0.469 |
|
2011 |
Kipper K, Sild S, Hetényi C, Remme J, Liiv A. Pseudouridylation of 23S rRNA helix 69 promotes peptide release by release factor RF2 but not by release factor RF1. Biochimie. 93: 834-44. PMID 21281690 DOI: 10.1016/J.Biochi.2010.12.018 |
0.349 |
|
2010 |
Ero R, Leppik M, Liiv A, Remme J. Specificity and kinetics of 23S rRNA modification enzymes RlmH and RluD. Rna (New York, N.Y.). 16: 2075-84. PMID 20817755 DOI: 10.1261/Rna.2234310 |
0.366 |
|
2010 |
Siibak T, Remme J. Subribosomal particle analysis reveals the stages of bacterial ribosome assembly at which rRNA nucleotides are modified. Rna (New York, N.Y.). 16: 2023-32. PMID 20719918 DOI: 10.1261/Rna.2160010 |
0.508 |
|
2010 |
Pulk A, Liiv A, Peil L, Maiväli U, Nierhaus K, Remme J. Ribosome reactivation by replacement of damaged proteins. Molecular Microbiology. 75: 801-14. PMID 19968789 DOI: 10.1111/J.1365-2958.2009.07002.X |
0.473 |
|
2009 |
Siibak T, Peil L, Xiong L, Mankin A, Remme J, Tenson T. Erythromycin- and chloramphenicol-induced ribosomal assembly defects are secondary effects of protein synthesis inhibition. Antimicrobial Agents and Chemotherapy. 53: 563-71. PMID 19029332 DOI: 10.1128/Aac.00870-08 |
0.47 |
|
2009 |
Kipper K, Hetényi C, Sild S, Remme J, Liiv A. Ribosomal intersubunit bridge B2a is involved in factor-dependent translation initiation and translational processivity. Journal of Molecular Biology. 385: 405-22. PMID 19007789 DOI: 10.1016/J.Jmb.2008.10.065 |
0.498 |
|
2008 |
Ero R, Peil L, Liiv A, Remme J. Identification of pseudouridine methyltransferase in Escherichia coli. Rna (New York, N.Y.). 14: 2223-33. PMID 18755836 DOI: 10.1261/Rna.1186608 |
0.441 |
|
2008 |
Peil L, Virumäe K, Remme J. Ribosome assembly in Escherichia coli strains lacking the RNA helicase DeaD/CsdA or DbpA. The Febs Journal. 275: 3772-82. PMID 18565105 DOI: 10.1111/J.1742-4658.2008.06523.X |
0.486 |
|
2007 |
Leppik M, Peil L, Kipper K, Liiv A, Remme J. Substrate specificity of the pseudouridine synthase RluD in Escherichia coli. The Febs Journal. 274: 5759-66. PMID 17937767 DOI: 10.1111/J.1742-4658.2007.06101.X |
0.49 |
|
2006 |
Iskakova MB, Szaflarski W, Dreyfus M, Remme J, Nierhaus KH. Troubleshooting coupled in vitro transcription-translation system derived from Escherichia coli cells: synthesis of high-yield fully active proteins. Nucleic Acids Research. 34: e135. PMID 17038334 DOI: 10.1093/Nar/Gkl462 |
0.393 |
|
2006 |
Pulk A, Maiväli U, Remme J. Identification of nucleotides in E. coli 16S rRNA essential for ribosome subunit association. Rna (New York, N.Y.). 12: 790-6. PMID 16556933 DOI: 10.1261/Rna.2275906 |
0.398 |
|
2005 |
Liiv A, Karitkina D, Maiväli U, Remme J. Analysis of the function of E. coli 23S rRNA helix-loop 69 by mutagenesis. Bmc Molecular Biology. 6: 18. PMID 16053518 DOI: 10.1186/1471-2199-6-18 |
0.496 |
|
2005 |
Xu J, Golshani A, Aoki H, Remme J, Chosay J, Shinabarger DL, Ganoza MC. Protected nucleotide G2608 in 23S rRNA confers resistance to oxazolidinones in E. coli. Biochemical and Biophysical Research Communications. 328: 471-6. PMID 15694371 DOI: 10.1016/J.Bbrc.2004.12.189 |
0.381 |
|
2004 |
Ougland R, Zhang CM, Liiv A, Johansen RF, Seeberg E, Hou YM, Remme J, Falnes PØ. AlkB restores the biological function of mRNA and tRNA inactivated by chemical methylation. Molecular Cell. 16: 107-16. PMID 15469826 DOI: 10.1016/J.Molcel.2004.09.002 |
0.395 |
|
2004 |
Liiv A, Remme J. Importance of transient structures during post-transcriptional refolding of the pre-23S rRNA and ribosomal large subunit assembly. Journal of Molecular Biology. 342: 725-41. PMID 15342233 DOI: 10.1016/J.Jmb.2004.07.082 |
0.467 |
|
2004 |
Maiväli U, Remme J. Definition of bases in 23S rRNA essential for ribosomal subunit association. Rna (New York, N.Y.). 10: 600-4. PMID 15037769 DOI: 10.1261/Rna.5220504 |
0.427 |
|
2003 |
Allas U, Liiv A, Remme J. Functional interaction between RNase III and the Escherichia coli ribosome. Bmc Molecular Biology. 4: 8. PMID 12814522 DOI: 10.1186/1471-2199-4-8 |
0.418 |
|
2002 |
Maiväli U, Pulk A, Loogväli EL, Remme J. Accessibility of phosphates in domain I of 23 S rRNA in the ribosomal 50 S subunit as detected by R(P) phosphorothioates. Biochimica Et Biophysica Acta. 1579: 1-7. PMID 12401213 DOI: 10.1016/S0167-4781(02)00415-3 |
0.473 |
|
2002 |
Virumae K, Saarma U, Horowitz J, Remme J. Functional importance of the 3'-terminal adenosine of tRNA in ribosomal translation. The Journal of Biological Chemistry. 277: 24128-34. PMID 11967262 DOI: 10.1074/Jbc.M200393200 |
0.419 |
|
2001 |
Ofengand J, Malhotra A, Remme J, Gutgsell NS, Del Campo M, Jean-Charles S, Peil L, Kaya Y. Pseudouridines and pseudouridine synthases of the ribosome. Cold Spring Harbor Symposia On Quantitative Biology. 66: 147-59. PMID 12762017 DOI: 10.1101/Sqb.2001.66.147 |
0.506 |
|
1998 |
Liiv A, Tenson T, Margus T, Remme J. Multiple functions of the transcribed spacers in ribosomal RNA operons. Biological Chemistry. 379: 783-93. PMID 9705142 DOI: 10.1515/Bchm.1998.379.7.783 |
0.469 |
|
1998 |
Liiv A, Remme J. Base-pairing of 23 S rRNA ends is essential for ribosomal large subunit assembly. Journal of Molecular Biology. 276: 537-45. PMID 9551095 DOI: 10.1006/Jmbi.1997.1532 |
0.441 |
|
1997 |
Saarma U, Remme J, Ehrenberg M, Bilgin N. An A to U transversion at position 1067 of 23 S rRNA from Escherichia coli impairs EF-Tu and EF-G function. Journal of Molecular Biology. 272: 327-35. PMID 9325093 DOI: 10.1006/Jmbi.1997.1254 |
0.397 |
|
1996 |
Spahn CM, Remme J, Schäfer MA, Nierhaus KH. Mutational analysis of two highly conserved UGG sequences of 23 S rRNA from Escherichia coli. The Journal of Biological Chemistry. 271: 32849-56. PMID 8955123 DOI: 10.1074/Jbc.271.51.32849 |
0.45 |
|
1996 |
Liiv A, Tenson T, Remme J. Analysis of the ribosome large subunit assembly and 23 S rRNA stability in vivo. Journal of Molecular Biology. 263: 396-410. PMID 8918596 DOI: 10.1006/Jmbi.1996.0584 |
0.497 |
|
1992 |
Saarma U, Remme J. Novel mutants of 23S RNA: characterization of functional properties. Nucleic Acids Research. 20: 3147-52. PMID 1377819 DOI: 10.1093/Nar/20.12.3147 |
0.386 |
|
1989 |
Remme J, Margus T, Villems R, Nierhaus KH. The third ribosomal tRNA-binding site, the E site, is occupied in native polysomes. Febs Journal. 183: 281-284. PMID 2667995 DOI: 10.1111/J.1432-1033.1989.Tb14925.X |
0.371 |
|
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