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Michael Matthew Cox - Publications

Affiliations: 
1983- Biochemistry University of Wisconsin, Madison, Madison, WI 
Area:
genetic recombination and DNA repair
Website:
https://biochem.wisc.edu/faculty/cox

54 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Henrikus SS, Henry C, McGrath AE, Jergic S, McDonald JP, Hellmich Y, Bruckbauer ST, Ritger ML, Cherry ME, Wood EA, Pham PT, Goodman MF, Woodgate R, Cox MM, van Oijen AM, et al. Single-molecule live-cell imaging reveals RecB-dependent function of DNA polymerase IV in double strand break repair. Nucleic Acids Research. PMID 32687193 DOI: 10.1093/nar/gkaa597  0.36
2020 Romero ZJ, Chen SH, Armstrong T, Wood EA, Oijen van A, Robinson A, Cox MM. Resolving Toxic DNA repair intermediates in every E. coli replication cycle: critical roles for RecG, Uup and RadD. Nucleic Acids Research. PMID 32644157 DOI: 10.1093/nar/gkaa579  0.36
2020 Dubiel K, Henry C, Spenkelink LM, Kozlov AG, Wood EA, Jergic S, Dixon NE, van Oijen AM, Cox MM, Lohman TM, Sandler SJ, Keck JL. Development of a single-stranded DNA-binding protein fluorescent fusion toolbox. Nucleic Acids Research. PMID 32374866 DOI: 10.1093/nar/gkaa320  0.36
2019 Romero ZJ, Armstrong TJ, Henrikus SS, Chen SH, Glass DJ, Ferrazzoli AE, Wood EA, Chitteni-Pattu S, van Oijen AM, Lovett ST, Robinson A, Cox MM. Frequent template switching in postreplication gaps: suppression of deleterious consequences by the Escherichia coli Uup and RadD proteins. Nucleic Acids Research. PMID 31665437 DOI: 10.1093/nar/gkz960  0.44
2019 Ghodke H, Paudel BP, Lewis JS, Jergic S, Gopal K, Romero ZJ, Wood EA, Woodgate R, Cox MM, van Oijen AM. Spatial and temporal organization of RecA in the DNA-damage response. Elife. 8. PMID 30717823 DOI: 10.7554/eLife.42761  0.36
2019 Bruckbauer ST, Trimarco JD, Martin J, Bushnell B, Senn KA, Schackwitz W, Lipzen A, Blow M, Wood EA, Culberson WS, Pennacchio C, Cox MM. Experimental evolution of extreme resistance to ionizing radiation in after 50 cycles of selection. Journal of Bacteriology. PMID 30692176 DOI: 10.1128/JB.00784-18  0.36
2019 Bruckbauer ST, Trimarco JD, Henry C, Wood EA, Battista JR, Cox MM. A variant of the Escherichia coli anaerobic transcription factor FNR exhibiting diminished promoter activation function enhances ionizing radiation resistance. Plos One. 14: e0199482. PMID 30673695 DOI: 10.1371/journal.pone.0199482  0.36
2019 Henrikus SS, Henry C, Ghodke H, Wood EA, Mbele N, Saxena R, Basu U, van Oijen AM, Cox MM, Robinson A. RecFOR epistasis group: RecF and RecO have distinct localizations and functions in Escherichia coli. Nucleic Acids Research. PMID 30657965 DOI: 10.1093/nar/gkz003  0.36
2018 Henrikus SS, Wood EA, McDonald JP, Cox MM, Woodgate R, Goodman MF, van Oijen AM, Robinson A. DNA polymerase IV primarily operates outside of DNA replication forks in Escherichia coli. Plos Genetics. 14: e1007161. PMID 29351274 DOI: 10.1371/journal.pgen.1007161  0.36
2017 Lewis JS, Spenkelink LM, Jergic S, Wood EA, Monachino E, Horan NP, Duderstadt KE, Cox MM, Robinson A, Dixon NE, van Oijen AM. Single-molecule visualization of fast polymerase turnover in the bacterial replisome. Elife. 6. PMID 28432790 DOI: 10.7554/eLife.23932  0.36
2017 Stanage TH, Page AN, Cox MM. DNA flap creation by the RarA/MgsA protein of Escherichia coli. Nucleic Acids Research. 45: 2724-2735. PMID 28053120 DOI: 10.1093/nar/gkw1322  1
2016 Leite WC, Galvão CW, Saab SC, Iulek J, Etto RM, Steffens MB, Chitteni-Pattu S, Stanage T, Keck JL, Cox MM. Structural and Functional Studies of H. seropedicae RecA Protein - Insights into the Polymerization of RecA Protein as Nucleoprotein Filament. Plos One. 11: e0159871. PMID 27447485 DOI: 10.1371/journal.pone.0159871  0.44
2016 Bakhlanova IV, Dudkina AV, Wood EA, Lanzov VA, Cox MM, Baitin DM. DNA Metabolism in Balance: Rapid Loss of a RecA-Based Hyperrec Phenotype. Plos One. 11: e0154137. PMID 27124470 DOI: 10.1371/journal.pone.0154137  0.36
2015 Rajendram M, Zhang L, Reynolds BJ, Auer GK, Tuson HH, Ngo KV, Cox MM, Yethiraj A, Cui Q, Weibel DB. Anionic Phospholipids Stabilize RecA Filament Bundles in Escherichia coli. Molecular Cell. 60: 374-84. PMID 26481664 DOI: 10.1016/j.molcel.2015.09.009  0.56
2015 Robinson A, McDonald JP, Caldas VE, Patel M, Wood EA, Punter CM, Ghodke H, Cox MM, Woodgate R, Goodman MF, van Oijen AM. Regulation of Mutagenic DNA Polymerase V Activation in Space and Time. Plos Genetics. 11: e1005482. PMID 26317348 DOI: 10.1371/journal.pgen.1005482  0.36
2015 Kim T, Chitteni-Pattu S, Cox BL, Wood EA, Sandler SJ, Cox MM. Directed Evolution of RecA Variants with Enhanced Capacity for Conjugational Recombination. Plos Genetics. 11: e1005278. PMID 26047498 DOI: 10.1371/journal.pgen.1005278  0.44
2015 Petrova V, Chen SH, Molzberger ET, Tomko E, Chitteni-Pattu S, Jia H, Ordabayev Y, Lohman TM, Cox MM. Active displacement of RecA filaments by UvrD translocase activity. Nucleic Acids Research. 43: 4133-49. PMID 25824953 DOI: 10.1093/nar/gkv186  0.44
2015 Piechura JR, Tseng TL, Hsu HF, Byrne RT, Windgassen TA, Chitteni-Pattu S, Battista JR, Li HW, Cox MM. Biochemical characterization of RecA variants that contribute to extreme resistance to ionizing radiation. Dna Repair. 26: 30-43. PMID 25559557 DOI: 10.1016/j.dnarep.2014.12.001  0.44
2015 Chen SH, Byrne RT, Wood EA, Cox MM. Escherichia coli radD (yejH) gene: a novel function involved in radiation resistance and double-strand break repair. Molecular Microbiology. 95: 754-68. PMID 25425430 DOI: 10.1111/mmi.12885  0.36
2014 Byrne RT, Chen SH, Wood EA, Cabot EL, Cox MM. Escherichia coli genes and pathways involved in surviving extreme exposure to ionizing radiation. Journal of Bacteriology. 196: 3534-45. PMID 25049088 DOI: 10.1128/JB.01589-14  0.36
2014 Byrne RT, Klingele AJ, Cabot EL, Schackwitz WS, Martin JA, Martin J, Wang Z, Wood EA, Pennacchio C, Pennacchio LA, Perna NT, Battista JR, Cox MM. Evolution of extreme resistance to ionizing radiation via genetic adaptation of DNA repair. Elife. 3: e01322. PMID 24596148  0.36
2013 Ngo KV, Molzberger ET, Chitteni-Pattu S, Cox MM. Regulation of Deinococcus radiodurans RecA protein function via modulation of active and inactive nucleoprotein filament states. The Journal of Biological Chemistry. 288: 21351-66. PMID 23729671 DOI: 10.1074/jbc.M113.459230  0.56
2013 Norais C, Servant P, Bouthier-de-la-Tour C, Coureux PD, Ithurbide S, Vannier F, Guerin PP, Dulberger CL, Satyshur KA, Keck JL, Armengaud J, Cox MM, Sommer S. The Deinococcus radiodurans DR1245 protein, a DdrB partner homologous to YbjN proteins and reminiscent of type III secretion system chaperones. Plos One. 8: e56558. PMID 23441204 DOI: 10.1371/journal.pone.0056558  0.36
2012 George NP, Ngo KV, Chitteni-Pattu S, Norais CA, Battista JR, Cox MM, Keck JL. Structure and cellular dynamics of Deinococcus radiodurans single-stranded DNA (ssDNA)-binding protein (SSB)-DNA complexes. The Journal of Biological Chemistry. 287: 22123-32. PMID 22570477 DOI: 10.1074/jbc.M112.367573  0.56
2011 Hsu HF, Ngo KV, Chitteni-Pattu S, Cox MM, Li HW. Investigating Deinococcus radiodurans RecA protein filament formation on double-stranded DNA by a real-time single-molecule approach. Biochemistry. 50: 8270-80. PMID 21853996 DOI: 10.1021/bi200423t  0.56
2011 Galkin VE, Britt RL, Bane LB, Yu X, Cox MM, Egelman EH. Two modes of binding of DinI to RecA filament provide a new insight into the regulation of SOS response by DinI protein. Journal of Molecular Biology. 408: 815-24. PMID 21458462 DOI: 10.1016/j.jmb.2011.03.046  0.44
2011 Page AN, George NP, Marceau AH, Cox MM, Keck JL. Structure and biochemical activities of Escherichia coli MgsA. The Journal of Biological Chemistry. 286: 12075-85. PMID 21297161 DOI: 10.1074/jbc.M110.210187  1
2011 Britt RL, Chitteni-Pattu S, Page AN, Cox MM. RecA K72R filament formation defects reveal an oligomeric RecA species involved in filament extension. The Journal of Biological Chemistry. 286: 7830-40. PMID 21193798 DOI: 10.1074/jbc.M110.194407  1
2011 Gruenig MC, Lu D, Won SJ, Dulberger CL, Manlick AJ, Keck JL, Cox MM. Creating directed double-strand breaks with the Ref protein: a novel RecA-dependent nuclease from bacteriophage P1. The Journal of Biological Chemistry. 286: 8240-51. PMID 21193392 DOI: 10.1074/jbc.M110.205088  0.36
2010 Gruenig MC, Stohl EA, Chitteni-Pattu S, Seifert HS, Cox MM. Less is more: Neisseria gonorrhoeae RecX protein stimulates recombination by inhibiting RecA. The Journal of Biological Chemistry. 285: 37188-97. PMID 20851893 DOI: 10.1074/jbc.M110.171967  0.44
2010 Petrova V, Satyshur KA, George NP, McCaslin D, Cox MM, Keck JL. X-ray crystal structure of the bacterial conjugation factor PsiB, a negative regulator of RecA. The Journal of Biological Chemistry. 285: 30615-21. PMID 20659894 DOI: 10.1074/jbc.M110.152298  0.36
2010 Cox MM, Keck JL, Battista JR. Rising from the Ashes: DNA Repair in Deinococcus radiodurans. Plos Genetics. 6: e1000815. PMID 20084105 DOI: 10.1371/journal.pgen.1000815  0.36
2010 Britt RL, Haruta N, Lusetti SL, Chitteni-Pattu S, Inman RB, Cox MM. Disassembly of Escherichia coli RecA E38K/DeltaC17 nucleoprotein filaments is required to complete DNA strand exchange. The Journal of Biological Chemistry. 285: 3211-26. PMID 19910465 DOI: 10.1074/jbc.M109.028951  0.44
2009 Petrova V, Chitteni-Pattu S, Drees JC, Inman RB, Cox MM. An SOS inhibitor that binds to free RecA protein: the PsiB protein. Molecular Cell. 36: 121-30. PMID 19818715 DOI: 10.1016/j.molcel.2009.07.026  0.44
2009 Norais CA, Chitteni-Pattu S, Wood EA, Inman RB, Cox MM. DdrB protein, an alternative Deinococcus radiodurans SSB induced by ionizing radiation. The Journal of Biological Chemistry. 284: 21402-11. PMID 19515845 DOI: 10.1074/jbc.M109.010454  0.44
2009 Harris DR, Pollock SV, Wood EA, Goiffon RJ, Klingele AJ, Cabot EL, Schackwitz W, Martin J, Eggington J, Durfee TJ, Middle CM, Norton JE, Popelars MC, Li H, Klugman SA, ... ... Cox MM, et al. Directed evolution of ionizing radiation resistance in Escherichia coli. Journal of Bacteriology. 191: 5240-52. PMID 19502398 DOI: 10.1128/JB.00502-09  0.56
2008 Shereda RD, Kozlov AG, Lohman TM, Cox MM, Keck JL. SSB as an organizer/mobilizer of genome maintenance complexes. Critical Reviews in Biochemistry and Molecular Biology. 43: 289-318. PMID 18937104 DOI: 10.1080/10409230802341296  0.36
2008 Harris DR, Ngo KV, Cox MM. The stable, functional core of DdrA from Deinococcus radiodurans R1 does not restore radioresistance in vivo. Journal of Bacteriology. 190: 6475-82. PMID 18676665 DOI: 10.1128/JB.01165-07  0.56
2008 Gruenig MC, Renzette N, Long E, Chitteni-Pattu S, Inman RB, Cox MM, Sandler SJ. RecA-mediated SOS induction requires an extended filament conformation but no ATP hydrolysis. Molecular Microbiology. 69: 1165-79. PMID 18627467 DOI: 10.1111/j.1365-2958.2008.06341.x  0.44
2008 Cox JM, Li H, Wood EA, Chitteni-Pattu S, Inman RB, Cox MM. Defective dissociation of a "slow" RecA mutant protein imparts an Escherichia coli growth defect. The Journal of Biological Chemistry. 283: 24909-21. PMID 18603529 DOI: 10.1074/jbc.M803934200  0.44
2006 Cox JM, Abbott SN, Chitteni-Pattu S, Inman RB, Cox MM. Complementation of one RecA protein point mutation by another. Evidence for trans catalysis of ATP hydrolysis. The Journal of Biological Chemistry. 281: 12968-75. PMID 16527806 DOI: 10.1074/jbc.M513736200  0.44
2006 Lusetti SL, Hobbs MD, Stohl EA, Chitteni-Pattu S, Inman RB, Seifert HS, Cox MM. The RecF protein antagonizes RecX function via direct interaction. Molecular Cell. 21: 41-50. PMID 16387652 DOI: 10.1016/j.molcel.2005.11.011  0.44
2006 Drees JC, Chitteni-Pattu S, McCaslin DR, Inman RB, Cox MM. Inhibition of RecA protein function by the RdgC protein from Escherichia coli. The Journal of Biological Chemistry. 281: 4708-17. PMID 16377615 DOI: 10.1074/jbc.M513592200  0.44
2004 Harris DR, Tanaka M, Saveliev SV, Jolivet E, Earl AM, Cox MM, Battista JR. Preserving genome integrity: the DdrA protein of Deinococcus radiodurans R1. Plos Biology. 2: e304. PMID 15361932 DOI: 10.1371/journal.pbio.0020304  0.56
2004 Drees JC, Lusetti SL, Chitteni-Pattu S, Inman RB, Cox MM. A RecA filament capping mechanism for RecX protein. Molecular Cell. 15: 789-98. PMID 15350222 DOI: 10.1016/j.molcel.2004.08.026  0.44
2004 Bernstein DA, Eggington JM, Killoran MP, Misic AM, Cox MM, Keck JL. Crystal structure of the Deinococcus radiodurans single-stranded DNA-binding protein suggests a mechanism for coping with DNA damage. Proceedings of the National Academy of Sciences of the United States of America. 101: 8575-80. PMID 15159541 DOI: 10.1073/pnas.0401331101  0.36
2004 Lusetti SL, Voloshin ON, Inman RB, Camerini-Otero RD, Cox MM. The DinI protein stabilizes RecA protein filaments. The Journal of Biological Chemistry. 279: 30037-46. PMID 15138263 DOI: 10.1074/jbc.M403064200  0.36
2004 Robu ME, Inman RB, Cox MM. Situational repair of replication forks: roles of RecG and RecA proteins. The Journal of Biological Chemistry. 279: 10973-81. PMID 14701860 DOI: 10.1074/jbc.M312184200  0.36
2003 Battista JR, Cox MM, Daly MJ, Narumi I, Radman M, Sommer S. The structure of D. radiodurans. Science (New York, N.Y.). 302: 567-8; author reply . PMID 14576403 DOI: 10.1126/science.302.5645.567  0.36
2003 Lusetti SL, Wood EA, Fleming CD, Modica MJ, Korth J, Abbott L, Dwyer DW, Roca AI, Inman RB, Cox MM. C-terminal deletions of the Escherichia coli RecA protein. Characterization of in vivo and in vitro effects. The Journal of Biological Chemistry. 278: 16372-80. PMID 12598539 DOI: 10.1074/jbc.M212917200  0.36
2002 Mori T, Saveliev SV, Xu Y, Stafford WF, Cox MM, Inman RB, Johnson CH. Circadian clock protein KaiC forms ATP-dependent hexameric rings and binds DNA. Proceedings of the National Academy of Sciences of the United States of America. 99: 17203-8. PMID 12477935 DOI: 10.1073/pnas.262578499  0.36
2002 Eggler AL, Inman RB, Cox MM. The Rad51-dependent pairing of long DNA substrates is stabilized by replication protein A. The Journal of Biological Chemistry. 277: 39280-8. PMID 12169690 DOI: 10.1074/jbc.M204328200  0.36
2002 Kim JI, Cox MM. The RecA proteins of Deinococcus radiodurans and Escherichia coli promote DNA strand exchange via inverse pathways. Proceedings of the National Academy of Sciences of the United States of America. 99: 7917-21. PMID 12048253 DOI: 10.1073/pnas.122218499  1
2002 Kim JI, Sharma AK, Abbott SN, Wood EA, Dwyer DW, Jambura A, Minton KW, Inman RB, Daly MJ, Cox MM. RecA Protein from the extremely radioresistant bacterium Deinococcus radiodurans: expression, purification, and characterization. Journal of Bacteriology. 184: 1649-60. PMID 11872716  1
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