Kevin Scott Wilson - Related publications

Oklahoma State University, Stillwater, OK, United States 
microbiology, biochemistry, ribosomes, antibiotics
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Bhatta A, Dienemann C, Cramer P, Hillen HS. Structural basis of RNA processing by human mitochondrial RNase P. Nature Structural & Molecular Biology. 28: 713-723. PMID 34489609 DOI: 10.1038/s41594-021-00637-y   
2021 Yang WQ, Xiong QP, Ge JY, Li H, Zhu WY, Nie Y, Lin X, Lv D, Li J, Lin H, Liu RJ. THUMPD3-TRMT112 is a m2G methyltransferase working on a broad range of tRNA substrates. Nucleic Acids Research. PMID 34669960 DOI: 10.1093/nar/gkab927   
2021 Culviner PH, Nocedal I, Fortune SM, Laub MT. Global Analysis of the Specificities and Targets of Endoribonucleases from Escherichia coli Toxin-Antitoxin Systems. Mbio. e0201221. PMID 34544284 DOI: 10.1128/mBio.02012-21   
2021 Bao C, Ermolenko DN. Ribosome as a Translocase and Helicase. Biochemistry. Biokhimiia. 86: 992-1002. PMID 34488575 DOI: 10.1134/S0006297921080095   
2021 GeZi G, Liu R, Du D, Wu N, Bao N, Fan L, Morigen M. YfiF, an unknown protein, affects initiation timing of chromosome replication in Escherichia coli. Journal of Basic Microbiology. PMID 34486756 DOI: 10.1002/jobm.202100265   
2021 Monroe JG, Smith TJ, Koutmou KS. Investigating the consequences of mRNA modifications on protein synthesis using in vitro translation assays. Methods in Enzymology. 658: 379-406. PMID 34517955 DOI: 10.1016/bs.mie.2021.06.011   
2021 Pandey KK, Madhry D, Ravi Kumar YS, Malvankar S, Sapra L, Srivastava RK, Bhattacharyya S, Verma B. Regulatory roles of tRNA-derived RNA fragments in human pathophysiology. Molecular Therapy. Nucleic Acids. 26: 161-173. PMID 34513302 DOI: 10.1016/j.omtn.2021.06.023   
2021 Cruz J, Lemos B. Post-transcriptional diversity in riboproteins and RNAs in aging and cancer. Seminars in Cancer Biology. PMID 34474152 DOI: 10.1016/j.semcancer.2021.08.012   
2021 Liu F, Bratulić S, Costello A, Miettinen TP, Badran AH. Directed evolution of rRNA improves translation kinetics and recombinant protein yield. Nature Communications. 12: 5638. PMID 34561441 DOI: 10.1038/s41467-021-25852-5   
2021 Pellegrino S, Terrosu S, Yusupova G, Yusupov M. Inhibition of the Eukaryotic 80S Ribosome as a Potential Anticancer Therapy: A Structural Perspective. Cancers. 13. PMID 34503202 DOI: 10.3390/cancers13174392   
2021 Liu YT, Strugatsky D, Liu W, Zhou ZH. Structure of human cytomegalovirus virion reveals host tRNA binding to capsid-associated tegument protein pp150. Nature Communications. 12: 5513. PMID 34535641 DOI: 10.1038/s41467-021-25791-1   
2021 Yusupova G, Yusupov M. A Path to the Atomic-Resolution Structures of Prokaryotic and Eukaryotic Ribosomes. Biochemistry. Biokhimiia. 86: 926-941. PMID 34488570 DOI: 10.1134/S0006297921080046   
2021 Han L, Marcus E, Phizicky EM. A semi-quantitative pull-down assay to study tRNA substrate specificity of modification enzymes. Methods in Enzymology. 658: 359-377. PMID 34517954 DOI: 10.1016/bs.mie.2021.06.010   
2021 Bakari-Soale M, Ikenga NJ, Scheibe M, Butter F, Jones NG, Kramer S, Engstler M. The nucleolar DExD/H protein Hel66 is involved in ribosome biogenesis in Trypanosoma brucei. Scientific Reports. 11: 18325. PMID 34526538 DOI: 10.1038/s41598-021-97020-0   
2021 Dunkelmann DL, Oehm SB, Beattie AT, Chin JW. A 68-codon genetic code to incorporate four distinct non-canonical amino acids enabled by automated orthogonal mRNA design. Nature Chemistry. PMID 34426682 DOI: 10.1038/s41557-021-00764-5   
2021 Thomas NK, Poodari VC, Jain M, Olsen HE, Akeson M, Abu-Shumays RL. Direct Nanopore Sequencing of Individual Full Length tRNA Strands. Acs Nano. PMID 34618430 DOI: 10.1021/acsnano.1c06488   
2021 Monaghan CE, Adamson SI, Kapur M, Chuang JH, Ackerman SL. The R140H mutation alters tRNA metabolism and mRNA 3' processing in mouse models of pontocerebellar hypoplasia. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34548404 DOI: 10.1073/pnas.2110730118   
2021 Zhou Y, Hu J, Liu L, Yan M, Zhang Q, Song X, Lin Y, Zhu D, Wei Y, Fu Z, Hu L, Chen Y, Li X. Gly-tRF enhances LCSC-like properties and promotes HCC cells migration by targeting NDFIP2. Cancer Cell International. 21: 502. PMID 34537070 DOI: 10.1186/s12935-021-02102-8   
2021 Chen B, Wei Z, Shi A. The complete mitochondrial genome of the jewel beetle, (Coleoptera: Buprestidae). Mitochondrial Dna. Part B, Resources. 6: 2962-2963. PMID 34553059 DOI: 10.1080/23802359.2021.1973920   
2021 Yan S, Lyu B, Tang X, Lu H, Tang J, Meng R, Cai B, Yang F. Complete mitochondrial genome of nipa palm hispid beetle Maulik (Coleoptera: Chrysomelidae: Cassidinae). Mitochondrial Dna. Part B, Resources. 6: 2652-2653. PMID 34435108 DOI: 10.1080/23802359.2021.1934172   
2021 Zhang W, Pan T. Quantitative probing of glycosylated queuosine modifications in tRNA. Methods in Enzymology. 658: 73-82. PMID 34517960 DOI: 10.1016/bs.mie.2021.06.003   
2021 Mohanty BK, Kushner SR. Inactivation of RNase P in Escherichia coli significantly changes post-transcriptional RNA metabolism. Molecular Microbiology. PMID 34486768 DOI: 10.1111/mmi.14808   
2021 Zahra S, Singh A, Poddar N, Kumar S. Transfer RNA-derived non-coding RNAs (tncRNAs): Hidden regulation of plants' transcriptional regulatory circuits. Computational and Structural Biotechnology Journal. 19: 5278-5291. PMID 34630945 DOI: 10.1016/j.csbj.2021.09.021   
2021 Zeng L, Peng H, Yu H, Wang W, Duan C, Fang C, Wu Y. Expression profiles of tRNA-derived small RNA and their potential roles in oral submucous fibrosis. Journal of Oral Pathology & Medicine : Official Publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology. PMID 34558114 DOI: 10.1111/jop.13245   
2021 Auparakkitanon S, Wilairat P. Universal scanning-free initiation of eukaryote protein translation-a new normal. Biomolecular Concepts. 12: 129-131. PMID 34496168 DOI: 10.1515/bmc-2021-0014   
2021 Das R, Watkins AM. RiboDraw: semiautomated two-dimensional drawing of RNA tertiary structure diagrams. Nar Genomics and Bioinformatics. 3: lqab091. PMID 34661102 DOI: 10.1093/nargab/lqab091   
2021 Lee JO, Lee M, Chung YJ. DBtRend: A Web-Server of tRNA Expression Profiles from Small RNA Sequencing Data in Humans. Genes. 12. PMID 34680971 DOI: 10.3390/genes12101576   
2021 Li C, Zhou J, Rao S, Du G, Liu S. Visualized Multigene Editing System for . Acs Synthetic Biology. PMID 34555894 DOI: 10.1021/acssynbio.1c00231   
2021 Naganathan A, Keltz R, Lyon H, Culver GM. Uncovering a delicate balance between endonuclease RNase III and ribosomal protein S15 in E. coli ribosome assembly. Biochimie. 191: 104-117. PMID 34508826 DOI: 10.1016/j.biochi.2021.09.003   
2021 Rollins MG, Shasmal M, Meade N, Astar H, Shen PS, Walsh D. Negative charge in the RACK1 loop broadens the translational capacity of the human ribosome. Cell Reports. 36: 109663. PMID 34496247 DOI: 10.1016/j.celrep.2021.109663   
2021 Liu K, Sun Q. Intragenic tRNA-promoted R-loops orchestrate transcription interference for plant oxidative stress responses. The Plant Cell. PMID 34463741 DOI: 10.1093/plcell/koab220   
2021 Cassaignau AME, Włodarski T, Chan SHS, Woodburn LF, Bukvin IV, Streit JO, Cabrita LD, Waudby CA, Christodoulou J. Interactions between nascent proteins and the ribosome surface inhibit co-translational folding. Nature Chemistry. PMID 34650236 DOI: 10.1038/s41557-021-00796-x   
2021 Jin D, Wek SA, Kudlapur NT, Cantara WA, Bakhtina M, Wek RC, Musier-Forsyth K. Disease-associated mutations in a bifunctional aminoacyl-tRNA synthetase gene elicit the integrated stress response. The Journal of Biological Chemistry. 101203. PMID 34537243 DOI: 10.1016/j.jbc.2021.101203   
2021 Chandrasekaran V, Desai N, Burton NO, Yang H, Price J, Miska EA, Ramakrishnan V. Visualizing formation of the active site in the mitochondrial ribosome. Elife. 10. PMID 34609277 DOI: 10.7554/eLife.68806   
2021 Kim Y, Eggers C, Shvetsova E, Kleemann L, Sin O, Leidel SA. Analysis of codon-specific translation by ribosome profiling. Methods in Enzymology. 658: 191-223. PMID 34517947 DOI: 10.1016/bs.mie.2021.06.025   
2021 Kim KQ, Zaher HS. Canary in a coal mine: collided ribosomes as sensors of cellular conditions. Trends in Biochemical Sciences. PMID 34607755 DOI: 10.1016/j.tibs.2021.09.001   
2021 Ficaretta ED, Wrobel CJJ, Roy SJS, Erickson SB, Italia JS, Chatterjee A. A Robust Platform for Unnatural Amino Acid Mutagenesis in E. coli Using the Bacterial Tryptophanyl-tRNA synthetase/tRNA pair. Journal of Molecular Biology. 167304. PMID 34655653 DOI: 10.1016/j.jmb.2021.167304   
2021 Santamaría-Gómez J, Rubio MÁ, López-Igual R, Romero-Losada AB, Delgado-Chaves FM, Bru-Martínez R, Romero-Campero FJ, Herrero A, Ibba M, Ochoa de Alda JAG, Luque I. Role of a cryptic tRNA gene operon in survival under translational stress. Nucleic Acids Research. PMID 34379789 DOI: 10.1093/nar/gkab661   
2021 Helman G, Mendes MI, Nicita F, Darbelli L, Sherbini O, Moore T, Derksen A, Amy Pizzino, Carrozzo R, Torraco A, Catteruccia M, Aiello C, Goffrini P, Figuccia S, Smith DEC, et al. Expanded phenotype of AARS1-related white matter disease. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 34446925 DOI: 10.1038/s41436-021-01286-8   
2021 Park J, Park J, Lee J, Lim C. The trinity of ribosome-associated quality control and stress signaling for proteostasis and neuronal physiology. Bmb Reports. PMID 34488933   
2021 Hao X, Zhao J, Hao R, Zhao Y, Xiangqun Y. Complete mitochondrial genome of the Small-Branded Swift: (Lepidoptera, Hesperiidae). Mitochondrial Dna. Part B, Resources. 6: 1599-1600. PMID 34027065 DOI: 10.1080/23802359.2021.1914523   
2021 Horikoshi T, Noguchi H, Umehara T, Mutsuro-Aoki H, Kurihara R, Noguchi R, Hashimoto T, Watanabe Y, Ando T, Kamata K, Park SY, Tamura K. Crystal structure of Nanoarchaeum equitans tyrosyl-tRNA synthetase and its aminoacylation activity toward tRNA with an extra guanosine residue at the 5'-terminus. Biochemical and Biophysical Research Communications. 575: 90-95. PMID 34461441 DOI: 10.1016/j.bbrc.2021.08.070   
2021 Chen C, Yuan J, Ji G, Zhang S, Gao Z. Amphioxus ribosomal proteins RPS15, RPS18, RPS19 and RPS30-precursor act as immune effectors via killing or agglutinating bacteria. Fish & Shellfish Immunology. PMID 34487827 DOI: 10.1016/j.fsi.2021.09.001   
2021 Erdmann PS, Hou Z, Klumpe S, Khavnekar S, Beck F, Wilfling F, Plitzko JM, Baumeister W. In situ cryo-electron tomography reveals gradient organization of ribosome biogenesis in intact nucleoli. Nature Communications. 12: 5364. PMID 34508074 DOI: 10.1038/s41467-021-25413-w   
2021 Yi X, He S, Wang S, Zhao H, Wu M, Liu S, Pan Y, Zhang Y, Sun X. Expression of different genotypes of bovine TRDMT1 gene and its polymorphisms association with body measures in Qinchuan cattle (Bos Taurus). Animal Biotechnology. 1-11. PMID 34629027 DOI: 10.1080/10495398.2021.1984248   
2021 Huang Y, Zhang H, Gu X, Qin S, Zheng M, Shi X, Peng C, Ju S. Elucidating the Role of Serum tRF-31-U5YKFN8DYDZDD as a Novel Diagnostic Biomarker in Gastric Cancer (GC). Frontiers in Oncology. 11: 723753. PMID 34497770 DOI: 10.3389/fonc.2021.723753   
2021 Hartman MCT. Non-canonical amino acid substrates of E. coli aminoacyl-tRNA synthetases. Chembiochem : a European Journal of Chemical Biology. PMID 34416067 DOI: 10.1002/cbic.202100299   
2021 Sekulovski S, Devant P, Panizza S, Gogakos T, Pitiriciu A, Heitmeier K, Ramsay EP, Barth M, Schmidt C, Tuschl T, Baas F, Weitzer S, Martinez J, Trowitzsch S. Assembly defects of human tRNA splicing endonuclease contribute to impaired pre-tRNA processing in pontocerebellar hypoplasia. Nature Communications. 12: 5610. PMID 34584079 DOI: 10.1038/s41467-021-25870-3   
2021 DeBenedictis EA, Carver GD, Chung CZ, Söll D, Badran AH. Multiplex suppression of four quadruplet codons via tRNA directed evolution. Nature Communications. 12: 5706. PMID 34588441 DOI: 10.1038/s41467-021-25948-y   
2021 Ramos J, Fu D. Detection of tRNA-specific adenosine deaminase activity and wobble inosine modification in human cell lysates. Methods in Enzymology. 658: 311-334. PMID 34517952 DOI: 10.1016/bs.mie.2021.06.008