Brian P English - Related publications

2013-2017 Janelia Research Campus / HHMI 
Single Particle Tracking, Microscopy, Biophysics
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Perfilov MM, Gurskaya NG, Serebrovskaya EO, Melnikov PA, Kharitonov SL, Lewis TR, Arshavsky VY, Baklaushev VP, Mishin AS, Lukyanov KA. Highly photostable fluorescent labeling of proteins in live cells using exchangeable coiled coils heterodimerization. Cellular and Molecular Life Sciences : Cmls. PMID 31894363 DOI: 10.1007/s00018-019-03426-5   
2020 Ohata J, Krishnamoorthy L, Gonzalez MA, Xiao T, Iovan DA, Toste FD, Miller EW, Chang CJ. An Activity-Based Methionine Bioconjugation Approach To Developing Proximity-Activated Imaging Reporters. Acs Central Science. 6: 32-40. PMID 31989024 DOI: 10.1021/acscentsci.9b01038   
2020 König AI, Sorkin R, Alon A, Nachmias D, Dhara K, Brand G, Yifrach O, Arbely E, Roichman Y, Elia N. Live cell single molecule tracking and localization microscopy of bioorthogonally labeled plasma membrane proteins. Nanoscale. PMID 31970355 DOI: 10.1039/c9nr08594g   
2020 Mideksa Y, Fottner M, Braus S, Weiß C, Nguyen TA, Meier S, Lang K, Feige MJ. Site-specific protein labeling with fluorophores as a tool to monitor protein turnover. Chembiochem : a European Journal of Chemical Biology. PMID 32011787 DOI: 10.1002/cbic.201900651   
2020 Zheng XT, Choi Y, Phua DGG, Tan YN. Noncovalent Fluorescent Biodot-Protein Conjugates with Well-Preserved Native Functions for Improved Sweat Glucose Detection. Bioconjugate Chemistry. PMID 31995367 DOI: 10.1021/acs.bioconjchem.9b00856   
2020 Segal I, Nachmias D, Konig A, Alon A, Arbely E, Elia N. A straightforward approach for bioorthogonal labeling of proteins and organelles in live mammalian cells, using a short peptide tag. Bmc Biology. 18: 5. PMID 31937312 DOI: 10.1186/s12915-019-0708-7   
2020 Haraszti RA, Braun JE. Preparation of SNAP-Beads for Colocalization Single-Molecule Spectroscopy (CoSMoS) of RNA-Protein Complexes. Methods in Molecular Biology (Clifton, N.J.). 2113: 17-22. PMID 32006304 DOI: 10.1007/978-1-0716-0278-2_2   
2020 Lu M, Kaminski CF, Kaminski Schierle G. Advanced fluorescence imaging of in situ protein aggregation. Physical Biology. PMID 31914432 DOI: 10.1088/1478-3975/ab694e   
2020 Zhu M, Liu RR, Zhai HL, Meng YJ, Han L, Ren CL. The binding mechanism of nitroreductase fluorescent probe: Active pocket deformation and intramolecular hydrogen bonds. International Journal of Biological Macromolecules. PMID 32057851 DOI: 10.1016/j.ijbiomac.2020.02.084   
2020 Petersen I, Schlüter R, Hoff KJ, Liebscher V, Bange G, Riedel K, Pané-Farré J. Non-invasive and label-free 3D-visualization shows in vivo oligomerization of the staphylococcal alkaline shock protein 23 (Asp23). Scientific Reports. 10: 125. PMID 31924851 DOI: 10.1038/s41598-019-56907-9   
2020 Lasker K, von Diezmann L, Zhou X, Ahrens DG, Mann TH, Moerner WE, Shapiro L. Selective sequestration of signalling proteins in a membraneless organelle reinforces the spatial regulation of asymmetry in Caulobacter crescentus. Nature Microbiology. PMID 31959967 DOI: 10.1038/s41564-019-0647-7   
2020 Kwon J, Park JS, Kang M, Choi S, Park J, Kim GT, Lee C, Cha S, Rhee HW, Shim SH. Bright ligand-activatable fluorescent protein for high-quality multicolor live-cell super-resolution microscopy. Nature Communications. 11: 273. PMID 31937765 DOI: 10.1038/s41467-019-14067-4   
2020 Kojima H, Fujita Y, Takeuchi R, Ikebe Y, Ohashi N, Yamamoto K, Itoh T. Cyclization Reaction-Based Turn-on Probe for Covalent Labeling of Target Proteins. Cell Chemical Biology. PMID 31991094 DOI: 10.1016/j.chembiol.2020.01.006   
2020 Marter P, Schmidt S, Kiontke S, Moog D. Optimized mRuby3 is a Suitable Fluorescent Protein for in vivo Co-localization Studies with GFP in the Diatom Phaeodactylum tricornutum. Protist. 171: 125715. PMID 32062589 DOI: 10.1016/j.protis.2020.125715   
2020 Dong G, He S, Qin X, Liu T, Jiang Y, Li X, Chen L, Han G, Sheng C, Li M. Discovery of Non-peptide, Environmental Sensitive Fluorescent Probes for Imaging p53-MDM2 Interaction in Living Cell Line and Tissue Slice. Analytical Chemistry. PMID 31918545 DOI: 10.1021/acs.analchem.9b04551   
2020 Fürsch J, Kammer KM, Kreft SG, Beck M, Stengel F. Proteome-Wide Structural Probing of Low-Abundant Protein Interactions by Cross-Linking Mass Spectrometry. Analytical Chemistry. PMID 32011863 DOI: 10.1021/acs.analchem.9b05559   
2020 Hoffman DP, Shtengel G, Xu CS, Campbell KR, Freeman M, Wang L, Milkie DE, Pasolli HA, Iyer N, Bogovic JA, Stabley DR, Shirinifard A, Pang S, Peale D, Schaefer K, et al. Correlative three-dimensional super-resolution and block-face electron microscopy of whole vitreously frozen cells. Science (New York, N.Y.). 367. PMID 31949053 DOI: 10.1126/science.aaz5357   
2020 Jena R, Garg DK, Achary MMV, Singh J, Tomar R, Choudhury L, Bansal R, Kundu B. Application of a protein domain as chaperone for enhancing biological activity and stability of other proteins. Journal of Biotechnology. PMID 32014561 DOI: 10.1016/j.jbiotec.2020.01.017   
2020 Sung G, Lee SY, Kang MG, Kim KL, An J, Sim J, Kim S, Kim S, Ko J, Rhee HW, Park KM, Kim K. Supra-blot: an accurate and reliable assay for detecting target proteins with a synthetic host molecule-enzyme hybrid. Chemical Communications (Cambridge, England). PMID 31930244 DOI: 10.1039/c9cc09699j   
2020 Baek M, Martín-Gago P, Laursen JS, Madsen JLH, Chakladar S, Olsen CA. Photo Cross-linking Probes Containing ε-N-Thioacyllysine and ε-N-Acyl-(δ-aza)lysine Residues. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 31922630 DOI: 10.1002/chem.201905338   
2020 Ahmad M, Anjum NA, Asif A, Ahmad A. Real-time monitoring of glutathione in living cells using genetically encoded FRET-based ratiometric nanosensor. Scientific Reports. 10: 992. PMID 31969596 DOI: 10.1038/s41598-020-57654-y   
2020 Luo J, Erb CA, Chen K. Simultaneous Measurement of Surface Proteins and Gene Expression from Single Cells. Methods in Molecular Biology (Clifton, N.J.). 2111: 35-46. PMID 31933196 DOI: 10.1007/978-1-0716-0266-9_3   
2020 Dougherty SE, Maduka AO, Inada T, Silva GM. Expanding Role of Ubiquitin in Translational Control. International Journal of Molecular Sciences. 21. PMID 32050486 DOI: 10.3390/ijms21031151   
2020 Tao A, Zhang R, Yuan J. Characterization of Photophysical Properties of the Photoactivatable Fluorescent Proteins for Superresolution Microscopy. The Journal of Physical Chemistry. B. PMID 32065748 DOI: 10.1021/acs.jpcb.9b11028   
2020 Schormann W, Hariharan S, Andrews DW. A reference library for assigning protein subcellular localizations by image-based machine learning. The Journal of Cell Biology. 219. PMID 31968357 DOI: 10.1083/jcb.201904090   
2020 Mullokandov G, Vijayakumar G, Leon P, Henry C, Wilson PC, Krammer F, Palese P, Brown BD. High-complexity extracellular barcoding using a viral hemagglutinin. Proceedings of the National Academy of Sciences of the United States of America. PMID 31988118 DOI: 10.1073/pnas.1919182117   
2020 Heusel M, Frank M, Köhler M, Amon S, Frommelt F, Rosenberger G, Bludau I, Aulakh S, Linder MI, Liu Y, Collins BC, Gstaiger M, Kutay U, Aebersold R. A Global Screen for Assembly State Changes of the Mitotic Proteome by SEC-SWATH-MS. Cell Systems. PMID 32027860 DOI: 10.1016/j.cels.2020.01.001   
2020 Hernando M, Orris G, Perodeau J, Lei S, Ferens FG, Patel TR, Stetefeld J, Nieuwkoop AJ, O'Neil JD. Solution structure and oligomeric state of the E. coli glycerol facilitator. Biochimica Et Biophysica Acta. Biomembranes. 183191. PMID 31953232 DOI: 10.1016/j.bbamem.2020.183191   
2020 Scheidler CM, Vrabel M, Schneider S. Genetic code expansion, protein expression and protein functionalisation in Bacillus subtilis. Acs Synthetic Biology. PMID 32053368 DOI: 10.1021/acssynbio.9b00458   
2020 Chang J, Chen X, Wang R, Shi R, Wang X, Lu W, Ma S, Xia Q. High-Throughput Screening Identifies Two Novel Small Molecule Enhancers of Recombinant Protein Expression. Molecules (Basel, Switzerland). 25. PMID 31952231 DOI: 10.3390/molecules25020353   
2020 McCullock TW, MacLean DM, Kammermeier PJ. Comparing the performance of mScarlet-I, mRuby3, and mCherry as FRET acceptors for mNeonGreen. Plos One. 15: e0219886. PMID 32023253 DOI: 10.1371/journal.pone.0219886   
2020 Welte H, Zhou T, Mihajlenko X, Mayans O, Kovermann M. What does fluorine do to a protein? Thermodynamic, and highly-resolved structural insights into fluorine-labelled variants of the cold shock protein. Scientific Reports. 10: 2640. PMID 32060391 DOI: 10.1038/s41598-020-59446-w   
2020 Gupta R, Leon F, Rauth S, Batra SK, Ponnusamy MP. A Systematic Review on the Implications of O-linked Glycan Branching and Truncating Enzymes on Cancer Progression and Metastasis. Cells. 9. PMID 32075174 DOI: 10.3390/cells9020446   
2020 Walsh IM, Bowman MA, Soto Santarriaga IF, Rodriguez A, Clark PL. Synonymous codon substitutions perturb cotranslational protein folding in vivo and impair cell fitness. Proceedings of the National Academy of Sciences of the United States of America. PMID 32015130 DOI: 10.1073/pnas.1907126117   
2020 Kong W, Mao J, Yang Y, Yuan J, Chen J, Luo Y, Lai T, Zuo L. Mechanisms of mTOR and Autophagy in Human Endothelial Cell Infected with Dengue Virus-2. Viral Immunology. 33: 61-70. PMID 31978319 DOI: 10.1089/vim.2019.0009   
2020 Kwon E, Heo WD. Optogenetic tools for dissecting complex intracellular signaling pathways. Biochemical and Biophysical Research Communications. PMID 31948753 DOI: 10.1016/j.bbrc.2019.12.132   
2020 Zhang W, Liu X, Li P, Zhang W, Wang H, Tang B. In Situ Fluorescence Imaging the Levels of Glycosylation and Phosphorylation by MOFs-based Nanoprobe in Depressed Mice. Analytical Chemistry. PMID 32028759 DOI: 10.1021/acs.analchem.9b04878   
2020 Verma R, Mohl D, Deshaies RJ. Harnessing the Power of Proteolysis for Targeted Protein Inactivation. Molecular Cell. PMID 32004468 DOI: 10.1016/j.molcel.2020.01.010   
2020 Zhou L, Li J, Zhang K, Shi L, Qin S, Li H. Electrochemical Cross-Linking and Cleavage Enables Molecular Gaping and Bridging on a Biosensing Surface. Analytical Chemistry. PMID 31927916 DOI: 10.1021/acs.analchem.9b04538   
2020 Farrants H, Tarnawski M, Müller TG, Otsuka S, Hiblot J, Koch B, Kueblbeck M, Kräusslich HG, Ellenberg J, Johnsson K. Chemogenetic Control of Nanobodies. Nature Methods. PMID 32066961 DOI: 10.1038/s41592-020-0746-7   
2020 Stolerman LM, Getz M, Smith SGL, Holst M, Rangamani P. Stability Analysis of a Bulk-Surface Reaction Model for Membrane Protein Clustering. Bulletin of Mathematical Biology. 82: 30. PMID 32025918 DOI: 10.1007/s11538-020-00703-4   
2020 Naro Y, Darrah K, Deiters A. Optical Control of Small Molecule-Induced Protein Degradation. Journal of the American Chemical Society. PMID 31927988 DOI: 10.1021/jacs.9b12718   
2020 Fang C, Tang L. Mapping Structural Dynamics of Proteins with Femtosecond Stimulated Raman Spectroscopy. Annual Review of Physical Chemistry. PMID 32075503 DOI: 10.1146/annurev-physchem-071119-040154   
2020 Martin ER, Barbieri A, Ford RC, Robinson RC. crystals reveal critical features of the interaction between CFTR and the PDZ2 domain of Na/H exchange cofactor NHERF1. The Journal of Biological Chemistry. PMID 32014995 DOI: 10.1074/jbc.RA119.012015   
2020 Hwang HY, Kim TY, Szász MA, Dome B, Malm J, Marko-Varga G, Kwon HJ. Profiling the Protein Targets of Unmodified Bio-Active Molecules with Drug Affinity Responsive Target Stability and Liquid Chromatography/Tandem Mass Spectrometry. Proteomics. e1900325. PMID 31926115 DOI: 10.1002/pmic.201900325   
2020 Maity A, Sarkar S, Theeyancheri L, Chakrabarti R. Choline chloride as a nano-crowder protects HP-36 from urea-induced denaturation: Insights from Solvent Dynamics and Protein-Solvent interaction. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 31971306 DOI: 10.1002/cphc.201901078   
2020 Winters CM, Hong-Brown LQ, Chiang HL. Intracellular vesicle clusters are organelles that synthesize extracellular vesicle-associated cargo proteins. The Journal of Biological Chemistry. PMID 31974164 DOI: 10.1074/jbc.RA119.008612   
2020 Victor T, O'Toole K, Easthon LM, Ge M, Smith RJ, Huang X, Yan H, Chu YS, Chen S, Gursoy D, Ralle M, Imperiali B, Allen KN, Miller LM. Lanthanide-Binding Tags for 3D X-Ray Imaging of Proteins in Cells at Nanoscale Resolution. Journal of the American Chemical Society. PMID 31923358 DOI: 10.1021/jacs.9b11571   
2020 Akinjiyan FA, Fazal A, Hild M, Beckwith REJ, Ross NT, Paulk J, Carbonneau S. A Novel Luminescence-Based High-Throughput Approach for Cellular Resolution of Protein Ubiquitination Using Tandem Ubiquitin Binding Entities (TUBEs). Slas Discovery : Advancing Life Sciences R & D. 2472555219901261. PMID 31997692 DOI: 10.1177/2472555219901261   
2020 Watanabe K, Itoh K, Park SH, Kaku M, Ishii K, Sasano H, Naitoh T, Unno M, Fukushima K. Resistin-like molecule beta, a colonic epithelial protein, exhibits antimicrobial activity against Staphylococcus aureus including methicillin-resistant strains. Surgery Today. PMID 32062787 DOI: 10.1007/s00595-020-01974-z