Year |
Citation |
Score |
2023 |
Rawal Y, Jia L, Meir A, Zhou S, Kaur H, Ruben EA, Kwon Y, Bernstein KA, Jasin M, Taylor AB, Burma S, Hromas R, Mazin AV, Zhao W, Zhou D, ... ... Greene EC, et al. Structural insights into BCDX2 complex function in homologous recombination. Nature. PMID 37344589 DOI: 10.1038/s41586-023-06219-w |
0.53 |
|
2023 |
Mustafi M, Kwon Y, Sung P, Greene EC. Single molecule visualization of Pif1 helicase translocation on single-stranded DNA. The Journal of Biological Chemistry. 104817. PMID 37178921 DOI: 10.1016/j.jbc.2023.104817 |
0.558 |
|
2022 |
Choi J, Kong M, Gallagher DN, Li K, Bronk G, Cao Y, Greene E, Haber JE. Repair of mismatched templates during Rad51-dependent Break-Induced Replication. Plos Genetics. 18: e1010056. PMID 36054210 DOI: 10.1371/journal.pgen.1010056 |
0.464 |
|
2022 |
Xue C, Salunkhe SJ, Tomimatsu N, Kawale AS, Kwon Y, Burma S, Sung P, Greene EC. Bloom helicase mediates formation of large single-stranded DNA loops during DNA end processing. Nature Communications. 13: 2248. PMID 35473934 DOI: 10.1038/s41467-022-29937-7 |
0.54 |
|
2022 |
Meir A, Crickard JB, Kwon Y, Sung P, Greene EC. Rad54 and Rdh54 prevent Srs2-mediated disruption of Rad51 presynaptic filaments. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35042797 DOI: 10.1073/pnas.2113871119 |
0.54 |
|
2021 |
Warren GM, Meir A, Wang J, Patel DJ, Greene EC, Shuman S. Structure-activity relationships at a nucleobase-stacking tryptophan required for chemomechanical coupling in the DNA resecting motor-nuclease AdnAB. Nucleic Acids Research. PMID 34967418 DOI: 10.1093/nar/gkab1270 |
0.509 |
|
2021 |
Kong M, Greene EC. Mechanistic Insights From Single-Molecule Studies of Repair of Double Strand Breaks. Frontiers in Cell and Developmental Biology. 9: 745311. PMID 34869333 DOI: 10.3389/fcell.2021.745311 |
0.527 |
|
2021 |
Roy U, Kwon Y, Sung P, Greene EC. Single-molecule studies of yeast Rad51 paralogs. Methods in Enzymology. 661: 343-362. PMID 34776219 DOI: 10.1016/bs.mie.2021.08.006 |
0.602 |
|
2021 |
Roy U, Greene EC. The Role of the Rad55-Rad57 Complex in DNA Repair. Genes. 12. PMID 34573372 DOI: 10.3390/genes12091390 |
0.514 |
|
2021 |
Meir A, Greene EC. Srs2 and Pif1 as Model Systems for Understanding Sf1a and Sf1b Helicase Structure and Function. Genes. 12. PMID 34573298 DOI: 10.3390/genes12091319 |
0.393 |
|
2021 |
Xue C, Greene EC. DNA Repair Pathway Choices in CRISPR-Cas9-Mediated Genome Editing. Trends in Genetics : Tig. PMID 33896583 DOI: 10.1016/j.tig.2021.02.008 |
0.453 |
|
2021 |
Roy U, Greene EC. Single-Stranded DNA Curtains for Single-Molecule Visualization of Rad51-ssDNA Filament Dynamics. Methods in Molecular Biology (Clifton, N.J.). 2281: 193-207. PMID 33847959 DOI: 10.1007/978-1-0716-1290-3_11 |
0.607 |
|
2021 |
Unciuleac MC, Meir A, Xue C, Warren GM, Greene EC, Shuman S. Clutch mechanism of chemomechanical coupling in a DNA resecting motor nuclease. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33836607 DOI: 10.1073/pnas.2023955118 |
0.518 |
|
2021 |
Adolph MB, Mohamed TM, Balakrishnan S, Xue C, Morati F, Modesti M, Greene EC, Chazin WJ, Cortez D. RADX controls RAD51 filament dynamics to regulate replication fork stability. Molecular Cell. PMID 33453169 DOI: 10.1016/j.molcel.2020.12.036 |
0.495 |
|
2021 |
Roy U, Kwon Y, Marie L, Symington L, Sung P, Lisby M, Greene EC. The Rad51 paralog complex Rad55-Rad57 acts as a molecular chaperone during homologous recombination. Molecular Cell. PMID 33421364 DOI: 10.1016/j.molcel.2020.12.019 |
0.433 |
|
2020 |
Xue C, Molnarova L, Steinfeld JB, Zhao W, Ma C, Spirek M, Kaniecki K, Kwon Y, Beláň O, Krejci K, Boulton SJ, Sung P, Greene EC, Krejci L. Single-molecule visualization of human RECQ5 interactions with single-stranded DNA recombination intermediates. Nucleic Acids Research. PMID 33332547 DOI: 10.1093/nar/gkaa1184 |
0.854 |
|
2020 |
Roy U, Greene EC. Demystifying the D-loop during DNA recombination. Nature. PMID 33057188 DOI: 10.1038/d41586-020-02831-2 |
0.44 |
|
2020 |
Crickard JB, Kwon Y, Sung P, Greene EC. Rad54 and Rdh54 occupy spatially and functionally distinct sites within the Rad51-ssDNA presynaptic complex. The Embo Journal. e105705. PMID 32790929 DOI: 10.15252/Embj.2020105705 |
0.515 |
|
2020 |
Meir A, Kong M, Xue C, Greene EC. DNA Curtains Shed Light on Complex Molecular Systems During Homologous Recombination. Journal of Visualized Experiments : Jove. PMID 32658186 DOI: 10.3791/61320 |
0.624 |
|
2020 |
Crickard JB, Moevus CJ, Kwon Y, Sung P, Greene EC. Rad54 Drives ATP Hydrolysis-Dependent DNA Sequence Alignment during Homologous Recombination. Cell. PMID 32502392 DOI: 10.1016/J.Cell.2020.04.056 |
0.635 |
|
2020 |
Kong M, Cutts EE, Pan D, Beuron F, Kaliyappan T, Xue C, Morris EP, Musacchio A, Vannini A, Greene EC. Human Condensin I and II Drive Extensive ATP-Dependent Compaction of Nucleosome-Bound DNA. Molecular Cell. PMID 32445620 DOI: 10.1016/J.Molcel.2020.04.026 |
0.578 |
|
2019 |
Jia N, Unciuleac MC, Xue C, Greene EC, Patel DJ, Shuman S. Structures and single-molecule analysis of bacterial motor nuclease AdnAB illuminate the mechanism of DNA double-strand break resection. Proceedings of the National Academy of Sciences of the United States of America. PMID 31740608 DOI: 10.1073/pnas.1913546116 |
0.616 |
|
2019 |
Xue C, Daley JM, Xue X, Steinfeld J, Kwon Y, Sung P, Greene EC. Single-molecule visualization of human BLM helicase as it acts upon double- and single-stranded DNA substrates. Nucleic Acids Research. PMID 31544923 DOI: 10.1093/Nar/Gkz810 |
0.863 |
|
2019 |
Yan Z, Xue C, Kumar S, Crickard JB, Yu Y, Wang W, Pham N, Li Y, Niu H, Sung P, Greene EC, Ira G. Rad52 Restrains Resection at DNA Double-Strand Break Ends in Yeast. Molecular Cell. PMID 31542296 DOI: 10.1016/J.Molcel.2019.08.017 |
0.645 |
|
2019 |
Steinfeld JB, Beláň O, Kwon Y, Terakawa T, Al-Zain A, Smith MJ, Crickard JB, Qi Z, Zhao W, Rothstein R, Symington LS, Sung P, Boulton SJ, Greene EC. Defining the influence of Rad51 and Dmc1 lineage-specific amino acids on genetic recombination. Genes & Development. PMID 31371435 DOI: 10.1101/Gad.328062.119 |
0.791 |
|
2019 |
Crickard JB, Xue C, Wang W, Kwon Y, Sung P, Greene EC. The RecQ helicase Sgs1 drives ATP-dependent disruption of Rad51 filaments. Nucleic Acids Research. PMID 30916344 DOI: 10.1093/Nar/Gkz186 |
0.588 |
|
2019 |
Crickard JB, Greene EC. Helicase Mechanisms During Homologous Recombination in Saccharomyces cerevisiae. Annual Review of Biophysics. PMID 30857400 DOI: 10.1146/Annurev-Biophys-052118-115418 |
0.498 |
|
2019 |
Xue C, Wang W, Crickard JB, Moevus CJ, Kwon Y, Sung P, Greene EC. Regulatory control of Sgs1 and Dna2 during eukaryotic DNA end resection. Proceedings of the National Academy of Sciences of the United States of America. PMID 30850524 DOI: 10.1073/Pnas.1819276116 |
0.665 |
|
2018 |
Crickard JB, Greene EC. The biochemistry of early meiotic recombination intermediates. Cell Cycle (Georgetown, Tex.). 17: 2520-2530. PMID 30482074 DOI: 10.1080/15384101.2018.1553355 |
0.384 |
|
2018 |
Crickard JB, Kwon Y, Sung P, Greene EC. Dynamic interactions of the Homologous Pairing 2 (Hop2)- Meiotic Nuclear Divisions 1 (Mnd1) protein complex with meiotic presynaptic filaments in budding yeast. The Journal of Biological Chemistry. PMID 30420424 DOI: 10.1074/Jbc.Ra118.006146 |
0.53 |
|
2018 |
Xue C, Greene EC. New roles for RAD52 in DNA repair. Cell Research. PMID 30367126 DOI: 10.1038/S41422-018-0105-8 |
0.576 |
|
2018 |
Crickard JB, Kaniecki K, Kwon Y, Sung P, Greene EC. Meiosis-specific recombinase Dmc1 is a potent inhibitor of the Srs2 antirecombinase. Proceedings of the National Academy of Sciences of the United States of America. PMID 30301803 DOI: 10.1073/Pnas.1810457115 |
0.362 |
|
2018 |
Crickard JB, Greene EC. Biochemical attributes of mitotic and meiotic presynaptic complexes. Dna Repair. PMID 30195641 DOI: 10.1016/J.Dnarep.2018.08.018 |
0.494 |
|
2018 |
De Tullio L, Kaniecki K, Greene EC. Single-Stranded DNA Curtains for Studying the Srs2 Helicase Using Total Internal Reflection Fluorescence Microscopy. Methods in Enzymology. 600: 407-437. PMID 29458768 DOI: 10.1016/Bs.Mie.2017.12.004 |
0.556 |
|
2018 |
Crickard JB, Kaniecki K, Kwon Y, Sung P, Lisby M, Greene EC. Regulation of Hed1 and Rad54 binding during maturation of the meiosis-specific presynaptic complex. The Embo Journal. PMID 29444896 DOI: 10.15252/Embj.201798728 |
0.56 |
|
2018 |
Crickard JB, Kaniecki K, Kwon Y, Sung P, Greene EC. Spontaneous self-segregation of Rad51 and Dmc1 DNA recombinases within mixed recombinase filaments. The Journal of Biological Chemistry. PMID 29382724 DOI: 10.1074/Jbc.Ra117.001143 |
0.528 |
|
2018 |
Greene EC. Decision letter: Spatial and temporal organization of RecA in the Escherichia coli DNA-damage response Elife. DOI: 10.7554/Elife.42761.025 |
0.433 |
|
2017 |
Kaniecki K, De Tullio L, Gibb B, Kwon Y, Sung P, Greene EC. Dissociation of Rad51 Presynaptic Complexes and Heteroduplex DNA Joints by Tandem Assemblies of Srs2. Cell Reports. 21: 3166-3177. PMID 29241544 DOI: 10.1016/J.Celrep.2017.11.047 |
0.604 |
|
2017 |
Kaniecki K, De Tullio L, Greene EC. A change of view: homologous recombination at single-molecule resolution. Nature Reviews. Genetics. PMID 29225334 DOI: 10.1038/Nrg.2017.92 |
0.47 |
|
2017 |
De Tullio L, Kaniecki K, Kwon Y, Crickard JB, Sung P, Greene EC. Yeast Srs2 Helicase Promotes Redistribution of Single-Stranded DNA-Bound RPA and Rad52 in Homologous Recombination Regulation. Cell Reports. 21: 570-577. PMID 29045827 DOI: 10.1016/J.Celrep.2017.09.073 |
0.672 |
|
2017 |
Zhao W, Steinfeld JB, Liang F, Chen X, Maranon DG, Jian Ma C, Kwon Y, Rao T, Wang W, Sheng C, Song X, Deng Y, Jimenez-Sainz J, Lu L, Jensen RB, ... ... Greene EC, et al. BRCA1-BARD1 promotes RAD51-mediated homologous DNA pairing. Nature. PMID 28976962 DOI: 10.1038/Nature24060 |
0.855 |
|
2017 |
Pokhrel N, Origanti S, Davenport EP, Gandhi D, Kaniecki K, Mehl RA, Greene EC, Dockendorff C, Antony E. Monitoring Replication Protein A (RPA) dynamics in homologous recombination through site-specific incorporation of non-canonical amino acids. Nucleic Acids Research. 45: 9413-9426. PMID 28934470 DOI: 10.1093/Nar/Gkx598 |
0.633 |
|
2017 |
Terakawa T, Bisht S, Eeftens JM, Dekker C, Haering CH, Greene EC. The condensin complex is a mechanochemical motor that translocates along DNA. Science (New York, N.Y.). PMID 28882993 DOI: 10.1126/Science.Aan6516 |
0.52 |
|
2017 |
Terakawa T, Redding S, Silverstein TD, Greene EC. Sequential eviction of crowded nucleoprotein complexes by the exonuclease RecBCD molecular motor. Proceedings of the National Academy of Sciences of the United States of America. PMID 28716908 DOI: 10.1073/Pnas.1701368114 |
0.54 |
|
2017 |
Ma CJ, Kwon Y, Sung P, Greene EC. Human RAD52 interactions with Replication Protein A and the RAD51 presynaptic complex. The Journal of Biological Chemistry. PMID 28551686 DOI: 10.1074/Jbc.M117.794545 |
0.487 |
|
2017 |
Lee JY, Steinfeld JB, Qi Z, Kwon Y, Sung P, Greene EC. Sequence imperfections and base triplet recognition by the Rad51/RecA family of recombinases. The Journal of Biological Chemistry. PMID 28476890 DOI: 10.1074/Jbc.M117.787614 |
0.83 |
|
2017 |
Greene EC. Replication Protein A Blocks the Way. Biochemistry. PMID 28333436 DOI: 10.1021/Acs.Biochem.7B00221 |
0.344 |
|
2017 |
Ma CJ, Steinfeld JB, Greene EC. Single-Stranded DNA Curtains for Studying Homologous Recombination. Methods in Enzymology. 582: 193-219. PMID 28062035 DOI: 10.1016/Bs.Mie.2016.08.005 |
0.867 |
|
2017 |
Erdel F, Kratz K, Willcox S, Griffith JD, Greene EC, de Lange T. Telomere Recognition and Assembly Mechanism of Mammalian Shelterin. Cell Reports. 18: 41-53. PMID 28052260 DOI: 10.1016/J.Celrep.2016.12.005 |
0.787 |
|
2016 |
Ma CJ, Gibb B, Kwon Y, Sung P, Greene EC. Protein dynamics of human RPA and RAD51 on ssDNA during assembly and disassembly of the RAD51 filament. Nucleic Acids Research. PMID 27903895 DOI: 10.1093/Nar/Gkw1125 |
0.628 |
|
2016 |
Taylor MR, Špírek M, Jian Ma C, Carzaniga R, Takaki T, Collinson LM, Greene EC, Krejci L, Boulton SJ. A Polar and Nucleotide-Dependent Mechanism of Action for RAD51 Paralogs in RAD51 Filament Remodeling. Molecular Cell. PMID 27867009 DOI: 10.1016/J.Molcel.2016.10.020 |
0.55 |
|
2016 |
Lee JY, Qi Z, Greene EC. ATP Hydrolysis Promotes Duplex DNA Release by the RecA Presynaptic Complex. The Journal of Biological Chemistry. PMID 27587394 DOI: 10.1074/Jbc.M116.740563 |
0.754 |
|
2016 |
Erdel F, Greene EC. Generalized nucleation and looping model for epigenetic memory of histone modifications. Proceedings of the National Academy of Sciences of the United States of America. PMID 27382173 DOI: 10.1073/Pnas.1605862113 |
0.659 |
|
2016 |
Greene EC. DNA Sequence Alignment during Homologous Recombination. The Journal of Biological Chemistry. PMID 27129270 DOI: 10.1074/Jbc.R116.724807 |
0.624 |
|
2016 |
Stigler J, Çamdere GÖ, Koshland DE, Greene EC. Single-Molecule Imaging Reveals a Collapsed Conformational State for DNA-Bound Cohesin. Cell Reports. 15: 988-998. PMID 27117417 DOI: 10.1016/J.Celrep.2016.04.003 |
0.644 |
|
2016 |
Qi Z, Greene EC. Visualizing recombination intermediates with single-stranded DNA curtains. Methods (San Diego, Calif.). PMID 27038747 DOI: 10.1016/J.Ymeth.2016.03.027 |
0.789 |
|
2016 |
Stigler J, Çamdere G, Koshland DE, Greene EC. Single-Molecule Imaging Reveals a Collapsed Conformational State for DNA-Bound Cohesin Cell Reports. 15: 988-998. DOI: 10.1016/j.celrep.2016.04.003 |
0.58 |
|
2016 |
Stigler J, Çamdere GÖ, Koshland DE, Greene EC. Collisions with Proteins on DNA Reveal a Small Functional Pore Size in the Cohesin Complex Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.429 |
0.626 |
|
2016 |
Yil Lee J, Terakawa T, Qi Z, Steinfeld JB, Redding S, Kwon Y, Gaines WA, Zhao W, Sung P, Greene EC. Base Triplet Stepping by the Rad51/RecA Family of Recombinases during Strand Exchange Biophysical Journal. 110: 62a. DOI: 10.1016/J.Bpj.2015.11.398 |
0.844 |
|
2015 |
Greene EC. Extra Views: On the influence of protein-DNA register during homologous recombination. Cell Cycle (Georgetown, Tex.). 0. PMID 26652653 DOI: 10.1080/15384101.2015.1121352 |
0.652 |
|
2015 |
Redding S, Sternberg SH, Marshall M, Gibb B, Bhat P, Guegler CK, Wiedenheft B, Doudna JA, Greene EC. Surveillance and Processing of Foreign DNA by the Escherichia coli CRISPR-Cas System. Cell. 163: 854-65. PMID 26522594 DOI: 10.1016/J.Cell.2015.10.003 |
0.588 |
|
2015 |
Lee JY, Terakawa T, Qi Z, Steinfeld JB, Redding S, Kwon Y, Gaines WA, Zhao W, Sung P, Greene EC. Erratum for the Report "Base triplet stepping by the Rad51/RecA family of recombinases" (Science (2015) (977-981)) Science. 350. PMID 26516287 DOI: 10.1126/Science.Aad6940 |
0.758 |
|
2015 |
Lee JY, Terakawa T, Qi Z, Steinfeld JB, Redding S, Kwon Y, Gaines WA, Zhao W, Sung P, Greene EC. DNA RECOMBINATION. Base triplet stepping by the Rad51/RecA family of recombinases. Science (New York, N.Y.). 349: 977-81. PMID 26315438 DOI: 10.1126/Science.Aab2666 |
0.851 |
|
2015 |
Duzdevich D, Warner MD, Ticau S, Ivica NA, Bell SP, Greene EC. The dynamics of eukaryotic replication initiation: origin specificity, licensing, and firing at the single-molecule level. Molecular Cell. 58: 483-94. PMID 25921072 DOI: 10.1016/J.Molcel.2015.03.017 |
0.546 |
|
2015 |
Moevus CJ, Greene EC. A molecular take on Aesop's The oak and the reeds. Cell. 160: 1039-40. PMID 25768898 DOI: 10.1016/J.Cell.2015.02.036 |
0.434 |
|
2015 |
Qi Z, Redding S, Lee JY, Gibb B, Kwon Y, Niu H, Gaines WA, Sung P, Greene EC. DNA sequence alignment by microhomology sampling during homologous recombination. Cell. 160: 856-69. PMID 25684365 DOI: 10.1016/J.Cell.2015.01.029 |
0.78 |
|
2015 |
Lee JY, Terakawa T, Qi Z, Steinfeld JB, Redding S, Kwon Y, Gaines WA, Zhao W, Sung P, Greene EC. Base triplet stepping by the Rad51/RecA family of recombinases Science. 349: 977-981. DOI: 10.1126/science.aab2666 |
0.767 |
|
2014 |
Gibb B, Ye LF, Kwon Y, Niu H, Sung P, Greene EC. Protein dynamics during presynaptic-complex assembly on individual single-stranded DNA molecules. Nature Structural & Molecular Biology. 21: 893-900. PMID 25195049 DOI: 10.1038/Nsmb.2886 |
0.567 |
|
2014 |
Collins BE, Ye LF, Duzdevich D, Greene EC. DNA curtains: novel tools for imaging protein-nucleic acid interactions at the single-molecule level. Methods in Cell Biology. 123: 217-34. PMID 24974030 DOI: 10.1016/B978-0-12-420138-5.00012-4 |
0.554 |
|
2014 |
Lee JY, Finkelstein IJ, Arciszewska LK, Sherratt DJ, Greene EC. Single-molecule imaging of FtsK translocation reveals mechanistic features of protein-protein collisions on DNA. Molecular Cell. 54: 832-43. PMID 24768536 DOI: 10.1016/J.Molcel.2014.03.033 |
0.775 |
|
2014 |
Deng SK, Gibb B, de Almeida MJ, Greene EC, Symington LS. RPA antagonizes microhomology-mediated repair of DNA double-strand breaks. Nature Structural & Molecular Biology. 21: 405-12. PMID 24608368 DOI: 10.1038/Nsmb.2786 |
0.603 |
|
2014 |
Silverstein TD, Gibb B, Greene EC. Visualizing protein movement on DNA at the single-molecule level using DNA curtains. Dna Repair. 20: 94-109. PMID 24598576 DOI: 10.1016/J.Dnarep.2014.02.004 |
0.654 |
|
2014 |
Gibb B, Ye LF, Gergoudis SC, Kwon Y, Niu H, Sung P, Greene EC. Concentration-dependent exchange of replication protein A on single-stranded DNA revealed by single-molecule imaging. Plos One. 9: e87922. PMID 24498402 DOI: 10.1371/Journal.Pone.0087922 |
0.622 |
|
2014 |
Sternberg SH, Redding S, Jinek M, Greene EC, Doudna JA. DNA interrogation by the CRISPR RNA-guided endonuclease Cas9. Nature. 507: 62-7. PMID 24476820 DOI: 10.1038/Nature13011 |
0.56 |
|
2014 |
Duzdevich D, Redding S, Greene EC. DNA dynamics and single-molecule biology. Chemical Reviews. 114: 3072-86. PMID 24400809 DOI: 10.1021/Cr4004117 |
0.646 |
|
2014 |
Redding S, Sternberg SH, Bhat P, Guegler CK, Hochstrasser ML, Wiedenheft B, Doudna JA, Greene EC. Targeting and Degradation of Viral DNA by the CRISPR-Cas System of Escherichia Coli Biophysical Journal. 106: 430a. DOI: 10.1016/J.Bpj.2013.11.2421 |
0.581 |
|
2013 |
Redding S, Greene EC. How do proteins locate specific targets in DNA? Chemical Physics Letters. 570. PMID 24187380 DOI: 10.1016/J.Cplett.2013.03.035 |
0.471 |
|
2013 |
Finkelstein IJ, Greene EC. Molecular traffic jams on DNA. Annual Review of Biophysics. 42: 241-63. PMID 23451891 DOI: 10.1146/Annurev-Biophys-083012-130304 |
0.771 |
|
2013 |
Gorman J, Greene EC. Target search dynamics during post-replicative mismatch repair. Cell Cycle (Georgetown, Tex.). 12: 537-8. PMID 23343769 DOI: 10.4161/Cc.23669 |
0.551 |
|
2013 |
Duzdevich D, Greene EC. Towards physiological complexity with in vitro single-molecule biophysics. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 368: 20120271. PMID 23267187 DOI: 10.1098/Rstb.2012.0271 |
0.418 |
|
2013 |
Wang F, Redding S, Finkelstein IJ, Gorman J, Reichman DR, Greene EC. The promoter-search mechanism of Escherichia coli RNA polymerase is dominated by three-dimensional diffusion. Nature Structural & Molecular Biology. 20: 174-81. PMID 23262491 DOI: 10.1038/Nsmb.2472 |
0.686 |
|
2013 |
Lee JY, Finkelstein IJ, Crozat E, Sherratt DJ, Greene EC. Single-Molecule DNA Curtains Reveals the Details of KOPS Targeting, Translocation, and Collision with Protein Roadblocks of DNA Translocase FtsK Biophysical Journal. 104: 173a. DOI: 10.1016/J.Bpj.2012.11.977 |
0.787 |
|
2013 |
Wang F, Redding S, Finkelstein I, Gorman J, Reichman D, Greene E. E. Coli RNA Polymerase Searches for Promoters through 3D Diffusion Biophysical Journal. 104: 541a. DOI: 10.1016/J.Bpj.2012.11.2997 |
0.705 |
|
2013 |
Sternberg SH, Redding S, Bhat P, Jinek M, Wiedenheft B, Doudna JA, Greene EC. Single-Molecule Observation of Viral DNA Targeting by CRISPR/Cas Immune Systems Biophysical Journal. 104: 198a. DOI: 10.1016/J.Bpj.2012.11.1120 |
0.586 |
|
2012 |
Gibb B, Greene EC. Sliding to the rescue of damaged DNA. Elife. 1: e00347. PMID 23240090 DOI: 10.7554/Elife.00347 |
0.608 |
|
2012 |
Gorman J, Wang F, Redding S, Plys AJ, Fazio T, Wind S, Alani EE, Greene EC. Single-molecule imaging reveals target-search mechanisms during DNA mismatch repair. Proceedings of the National Academy of Sciences of the United States of America. 109: E3074-83. PMID 23012240 DOI: 10.1073/Pnas.1211364109 |
0.606 |
|
2012 |
Lee JY, Wang F, Fazio T, Wind S, Greene EC. Measuring intermolecular rupture forces with a combined TIRF-optical trap microscope and DNA curtains. Biochemical and Biophysical Research Communications. 426: 565-70. PMID 22967893 DOI: 10.1016/J.Bbrc.2012.08.127 |
0.591 |
|
2012 |
Gibb B, Silverstein TD, Finkelstein IJ, Greene EC. Single-stranded DNA curtains for real-time single-molecule visualization of protein-nucleic acid interactions. Analytical Chemistry. 84: 7607-12. PMID 22950646 DOI: 10.1021/Ac302117Z |
0.775 |
|
2012 |
Fazio TA, Lee JY, Wind SJ, Greene EC. Assembly of DNA curtains using hydrogen silsesquioxane as a barrier to lipid diffusion. Analytical Chemistry. 84: 7613-7. PMID 22946619 DOI: 10.1021/Ac302149G |
0.539 |
|
2012 |
Plys AJ, Rogacheva MV, Greene EC, Alani E. The unstructured linker arms of Mlh1-Pms1 are important for interactions with DNA during mismatch repair. Journal of Molecular Biology. 422: 192-203. PMID 22659005 DOI: 10.1016/J.Jmb.2012.05.030 |
0.635 |
|
2012 |
Lee JY, Finkelstein IJ, Crozat E, Sherratt DJ, Greene EC. Single-molecule imaging of DNA curtains reveals mechanisms of KOPS sequence targeting by the DNA translocase FtsK. Proceedings of the National Academy of Sciences of the United States of America. 109: 6531-6. PMID 22493241 DOI: 10.1073/Pnas.1201613109 |
0.787 |
|
2012 |
Colavito S, MacRis-Kiss M, Seong C, Gleeson O, Greene EC, Klein HL, Krejci L, Sung P. Erratum: Functional significance of the Rad51-Srs2 complex in Rad51 presynaptic filament disruption (Nucleic Acids Research (2009) 37 (6754-6764) DOI: 10.1093/nar/gkp748) Nucleic Acids Research. 40. DOI: 10.1093/Nar/Gks252 |
0.309 |
|
2012 |
Finkelstein IJ, Yil Lee J, Crozat E, Sherratt DJ, Greene EC. Single-Molecule Imaging Reveals Mechanisms of Roadblock Clearance by DNA Motor Enzymes Biophysical Journal. 102: 610a-611a. DOI: 10.1016/J.Bpj.2011.11.3329 |
0.792 |
|
2011 |
Lee JY, Greene EC. Assembly of recombinant nucleosomes on nanofabricated DNA curtains for single-molecule imaging. Methods in Molecular Biology (Clifton, N.J.). 778: 243-58. PMID 21809211 DOI: 10.1007/978-1-61779-261-8_16 |
0.591 |
|
2011 |
Finkelstein IJ, Greene EC. Supported lipid bilayers and DNA curtains for high-throughput single-molecule studies. Methods in Molecular Biology (Clifton, N.J.). 745: 447-61. PMID 21660710 DOI: 10.1007/978-1-61779-129-1_26 |
0.782 |
|
2011 |
Chi P, Kwon YH, Visnapuu ML, Lam I, Santa Maria SR, Zheng X, Epshtein A, Greene EC, Sung P, Klein HL. Analyses of the yeast Rad51 recombinase A265V mutant reveal different in vivo roles of Swi2-like factors Nucleic Acids Research. 39: 6511-6522. PMID 21558173 DOI: 10.1093/Nar/Gkr297 |
0.544 |
|
2011 |
Wang F, Greene EC. Single-molecule studies of transcription: from one RNA polymerase at a time to the gene expression profile of a cell. Journal of Molecular Biology. 412: 814-31. PMID 21255583 DOI: 10.1016/J.Jmb.2011.01.024 |
0.341 |
|
2010 |
Finkelstein IJ, Visnapuu ML, Greene EC. Single-molecule imaging reveals mechanisms of protein disruption by a DNA translocase. Nature. 468: 983-7. PMID 21107319 DOI: 10.1038/Nature09561 |
0.784 |
|
2010 |
Gorman J, Plys AJ, Visnapuu ML, Alani E, Greene EC. Visualizing one-dimensional diffusion of eukaryotic DNA repair factors along a chromatin lattice. Nature Structural & Molecular Biology. 17: 932-8. PMID 20657586 DOI: 10.1038/Nsmb.1858 |
0.609 |
|
2010 |
Greene EC, Wind S, Fazio T, Gorman J, Visnapuu ML. DNA curtains for high-throughput single-molecule optical imaging. Methods in Enzymology. 472: 293-315. PMID 20580969 DOI: 10.1016/S0076-6879(10)72006-1 |
0.574 |
|
2010 |
Gorman J, Fazio T, Wang F, Wind S, Greene EC. Nanofabricated racks of aligned and anchored DNA substrates for single-molecule imaging. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 1372-9. PMID 19736980 DOI: 10.1021/La902443E |
0.637 |
|
2010 |
Greene E. Visual Biochemistry: High Throughput Single Molecule Imaging of Protein DNA Interactions Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.993 |
0.576 |
|
2010 |
Wang F, Finkelstein I, Greene E. Single Molecule Study of Promoter Search By E Coli RNAP Biophysical Journal. 98: 69a. DOI: 10.1016/J.Bpj.2009.12.393 |
0.689 |
|
2010 |
Finkelstein IJ, Greene EC. Molecular Traffic Jams on DNA Highways: Single Molecule Observation of Collisions Between RecBCD Helicase and DNA Binding Proteins Biophysical Journal. 98: 61a-62a. DOI: 10.1016/J.Bpj.2009.12.352 |
0.802 |
|
2010 |
Gorman J, Plys A, Visnapuu M, Alani E, Greene E. Visualizing the 1D Diffusion of Eukaryotic DNA Repair Factors Along a Chromatin Lattice Biophysical Journal. 98: 591a. DOI: 10.1016/J.Bpj.2009.12.3214 |
0.644 |
|
2009 |
Fazio TA, Visnapuu M, Greene EC, Wind SJ. Fabrication of Nanoscale "Curtain Rods" for DNA Curtains Using Nanoimprint Lithography. Journal of Vacuum Science & Technology. a, Vacuum, Surfaces, and Films : An Official Journal of the American Vacuum Society. 27: 3095-3098. PMID 20419081 DOI: 10.1116/1.3259951 |
0.543 |
|
2009 |
Finkelstein IJ, Greene EC. XPD helicase speeds through a molecular traffic jam. Molecular Cell. 35: 549-50. PMID 19748351 DOI: 10.1016/J.Molcel.2009.08.012 |
0.771 |
|
2009 |
Colavito S, Macris-Kiss M, Seong C, Gleeson O, Greene EC, Klein HL, Krejci L, Sung P. Functional significance of the Rad51-Srs2 complex in Rad51 presynaptic filament disruption Nucleic Acids Research. 37: 6754-6764. PMID 19745052 DOI: 10.1093/Nar/Gkp748 |
0.504 |
|
2009 |
Visnapuu ML, Greene EC. Single-molecule imaging of DNA curtains reveals intrinsic energy landscapes for nucleosome deposition. Nature Structural & Molecular Biology. 16: 1056-62. PMID 19734899 DOI: 10.1038/Nsmb.1655 |
0.571 |
|
2009 |
Robertson RB, Moses DN, Kwon Y, Chan P, Chi P, Klein H, Sung P, Greene EC. Structural transitions within human Rad51 nucleoprotein filaments. Proceedings of the National Academy of Sciences of the United States of America. 106: 12688-93. PMID 19622740 DOI: 10.1073/Pnas.0811465106 |
0.526 |
|
2009 |
Robertson RB, Moses DN, Kwon Y, Chan P, Zhao W, Chi P, Klein H, Sung P, Greene EC. Visualizing the disassembly of S. cerevisiae Rad51 nucleoprotein filaments. Journal of Molecular Biology. 388: 703-20. PMID 19327367 DOI: 10.1016/J.Jmb.2009.03.049 |
0.588 |
|
2009 |
Chi P, Kwon Y, Moses DN, Seong C, Sehorn MG, Singh AK, Tsubouchi H, Greene EC, Klein HL, Sung P. Functional interactions of meiotic recombination factors Rdh54 and Dmc1. Dna Repair. 8: 279-84. PMID 19028606 DOI: 10.1016/J.Dnarep.2008.10.012 |
0.378 |
|
2009 |
Fazio TA, Visnapuu ML, Wind SJ, Greene EC. Nanoscale "curtain rods": High-throughput tools for studying DNA-protein interactions Materials Research Society Symposium Proceedings. 1138: 7-13. DOI: 10.1557/Proc-1138-Ff08-03 |
0.53 |
|
2009 |
Greene E. High throughput assays for visualizing individual protein-DNA interactions Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.1031 |
0.488 |
|
2008 |
Finkelstein IJ, Greene EC. Single molecule studies of homologous recombination. Molecular Biosystems. 4: 1094-104. PMID 18931785 DOI: 10.1039/B811681B |
0.779 |
|
2008 |
Visnapuu ML, Fazio T, Wind S, Greene EC. Parallel arrays of geometric nanowells for assembling curtains of DNA with controlled lateral dispersion. Langmuir : the Acs Journal of Surfaces and Colloids. 24: 11293-9. PMID 18788761 DOI: 10.1021/La8017634 |
0.562 |
|
2008 |
Fazio T, Visnapuu ML, Wind S, Greene EC. DNA curtains and nanoscale curtain rods: high-throughput tools for single molecule imaging. Langmuir : the Acs Journal of Surfaces and Colloids. 24: 10524-31. PMID 18683960 DOI: 10.1021/La801762H |
0.616 |
|
2008 |
Gorman J, Greene EC. Visualizing one-dimensional diffusion of proteins along DNA. Nature Structural & Molecular Biology. 15: 768-74. PMID 18679428 DOI: 10.1038/Nsmb.1441 |
0.564 |
|
2008 |
Visnapuu ML, Duzdevich D, Greene EC. The importance of surfaces in single-molecule bioscience. Molecular Biosystems. 4: 394-403. PMID 18414737 DOI: 10.1039/B800444G |
0.377 |
|
2008 |
Kwon Y, Seong C, Chi P, Greene EC, Klein H, Sung P. ATP-dependent chromatin remodeling by the Saccharomyces cerevisiae homologous recombination factor Rdh54. The Journal of Biological Chemistry. 283: 10445-52. PMID 18292093 DOI: 10.1074/Jbc.M800082200 |
0.618 |
|
2007 |
Gorman J, Chowdhury A, Surtees JA, Shimada J, Reichman DR, Alani E, Greene EC. Dynamic basis for one-dimensional DNA scanning by the mismatch repair complex Msh2-Msh6. Molecular Cell. 28: 359-70. PMID 17996701 DOI: 10.1016/J.Molcel.2007.09.008 |
0.756 |
|
2007 |
Prasad TK, Robertson RB, Visnapuu ML, Chi P, Sung P, Greene EC. A DNA-translocating Snf2 molecular motor: Saccharomyces cerevisiae Rdh54 displays processive translocation and extrudes DNA loops. Journal of Molecular Biology. 369: 940-53. PMID 17467735 DOI: 10.1016/J.Jmb.2007.04.005 |
0.662 |
|
2006 |
Prasad TK, Yeykal CC, Greene EC. Visualizing the assembly of human Rad51 filaments on double-stranded DNA. Journal of Molecular Biology. 363: 713-28. PMID 16979659 DOI: 10.1016/J.Jmb.2006.08.046 |
0.61 |
|
2006 |
Yeykal CC, Greene EC. Visualizing the behavior of human Rad51 at the single-molecule level. Cell Cycle (Georgetown, Tex.). 5: 1033-8. PMID 16687937 DOI: 10.4161/Cc.5.10.2760 |
0.631 |
|
2006 |
Granéli A, Yeykal CC, Robertson RB, Greene EC. Long-distance lateral diffusion of human Rad51 on double-stranded DNA. Proceedings of the National Academy of Sciences of the United States of America. 103: 1221-6. PMID 16432240 DOI: 10.1073/Pnas.0508366103 |
0.64 |
|
2006 |
Granéli A, Yeykal CC, Prasad TK, Greene EC. Organized arrays of individual DNA molecules tethered to supported lipid bilayers. Langmuir : the Acs Journal of Surfaces and Colloids. 22: 292-9. PMID 16378434 DOI: 10.1021/La051944A |
0.494 |
|
2004 |
Greene EC, Mizuuchi K. Visualizing the assembly and disassembly mechanisms of the MuB transposition targeting complex. The Journal of Biological Chemistry. 279: 16736-43. PMID 14871890 DOI: 10.1074/Jbc.M311883200 |
0.641 |
|
2002 |
Greene EC, Mizuuchi K. Target immunity during Mu DNA transposition. Transpososome assembly and DNA looping enhance MuA-mediated disassembly of the MuB target complex. Molecular Cell. 10: 1367-78. PMID 12504012 DOI: 10.1016/S1097-2765(02)00733-5 |
0.707 |
|
2002 |
Greene EC, Mizuuchi K. Direct observation of single MuB polymers: evidence for a DNA-dependent conformational change for generating an active target complex. Molecular Cell. 9: 1079-89. PMID 12049743 DOI: 10.1016/S1097-2765(02)00514-2 |
0.644 |
|
2002 |
Greene EC, Mizuuchi K. Dynamics of a protein polymer: the assembly and disassembly pathways of the MuB transposition target complex. The Embo Journal. 21: 1477-86. PMID 11889053 DOI: 10.1093/emboj/21.6.1477 |
0.546 |
|
1998 |
Greene EC, Shippen DE. Developmentally programmed assembly of higher order telomerase complexes with distinct biochemical and structural properties. Genes & Development. 12: 2921-31. PMID 9744868 DOI: 10.1101/Gad.12.18.2921 |
0.662 |
|
1998 |
Greene EC, Bednenko J, Shippen DE. Flexible positioning of the telomerase-associated nuclease leads to preferential elimination of nontelomeric DNA. Molecular and Cellular Biology. 18: 1544-52. PMID 9488471 DOI: 10.1128/Mcb.18.3.1544 |
0.756 |
|
1997 |
Bednenko J, Melek M, Greene EC, Shippen DE. Developmentally regulated initiation of DNA synthesis by telomerase: evidence for factor-assisted de novo telomere formation. The Embo Journal. 16: 2507-18. PMID 9171363 DOI: 10.1093/Emboj/16.9.2507 |
0.711 |
|
1996 |
Melek M, Greene EC, Shippen DE. Processing of nontelomeric 3' ends by telomerase: default template alignment and endonucleolytic cleavage. Molecular and Cellular Biology. 16: 3437-45. PMID 8668159 DOI: 10.1128/Mcb.16.7.3437 |
0.753 |
|
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