Yan Zhang, Ph.D. - Publications

2016- Biomedical Informatics Ohio State University, Columbus, Columbus, OH 
Bioinformatics, Genomics, Proteomics

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Song X, Ye T, Jing D, Wei K, Ge Y, Bei X, Qi Y, Wang H, Li J, Zhang Y. Association between exposure to per- and polyfluoroalkyl substances and levels of lipid profile based on human studies. Reviews On Environmental Health. PMID 38408126 DOI: 10.1515/reveh-2023-0146  0.38
2024 Sang L, Ge Y, Liu F, Wei K, Shen X, Zhang Y, Li Z, Lu W, Gao X, Zhang Y. Association between per- and polyfluoroalkyl substances and sex hormone levels in males based on human studies. Ecotoxicology and Environmental Safety. 271: 115998. PMID 38262091 DOI: 10.1016/j.ecoenv.2024.115998  0.375
2022 Du J, Jiang Y, Liu X, Ji X, Xu B, Zhang Y, Liu Y, Zhang T, Lin J. HGF secreted by menstrual blood-derived endometrial stem cells ameliorates non-alcoholic fatty liver disease through downregulation of hepatic Rnf186. Stem Cells (Dayton, Ohio). PMID 36573461 DOI: 10.1093/stmcls/sxac091  0.342
2022 Liu X, Zhang Y, Ma C, Lin J, Du J. Correction to: Alternate-day fasting alleviates high fat diet induced non-alcoholic fatty liver disease through controlling PPARα/Fgf21 signaling. Molecular Biology Reports. PMID 35474058 DOI: 10.1007/s11033-022-07342-z  0.323
2022 Liu X, Zhang Y, Ma C, Lin J, Du J. Alternate-day fasting alleviates high fat diet induced non-alcoholic fatty liver disease through controlling PPARα/Fgf21 signaling. Molecular Biology Reports. PMID 35107741 DOI: 10.1007/s11033-022-07142-5  0.336
2021 Du J, Liu X, Zhang Y, Han X, Ma C, Liu Y, Guan L, Qiao L, Lin J. The Effects of Combined Therapy With Metformin and Hydroxypropyl-β-Cyclodextrin in a Mouse Model of Niemann-Pick Disease Type C1. Frontiers in Pharmacology. 12: 825425. PMID 35095535 DOI: 10.3389/fphar.2021.825425  0.338
2021 Li X, Kumar S, Harmanci A, Li S, Kitchen RR, Zhang Y, Wali VB, Reddy SM, Woodward WA, Reuben JM, Rozowsky J, Hatzis C, Ueno NT, Krishnamurthy S, Pusztai L, et al. Whole-genome sequencing of phenotypically distinct inflammatory breast cancers reveals similar genomic alterations to non-inflammatory breast cancers. Genome Medicine. 13: 70. PMID 33902690 DOI: 10.1186/s13073-021-00879-x  0.388
2020 Frankish A, Diekhans M, Jungreis I, Lagarde J, Loveland JE, Mudge JM, Sisu C, Wright JC, Armstrong J, Barnes I, Berry A, Bignell A, Boix C, Carbonell Sala S, Cunningham F, ... ... Zhang Y, et al. GENCODE 2021. Nucleic Acids Research. PMID 33270111 DOI: 10.1093/nar/gkaa1087  0.471
2020 Kumar S, Warrell J, Li S, McGillivray PD, Meyerson W, Salichos L, Harmanci A, Martinez-Fundichely A, Chan CWY, Nielsen MM, Lochovsky L, Zhang Y, Li X, Lou S, Pedersen JS, et al. Passenger Mutations in More Than 2,500 Cancer Genomes: Overall Molecular Functional Impact and Consequences. Cell. PMID 32084333 DOI: 10.1016/J.Cell.2020.01.032  0.455
2019 Eicher T, Patt A, Kautto E, Machiraju R, Mathé E, Zhang Y. Challenges in proteogenomics: a comparison of analysis methods with the case study of the DREAM proteogenomics sub-challenge. Bmc Bioinformatics. 20: 669. PMID 31861998 DOI: 10.1186/S12859-019-3253-Z  0.345
2019 Johnson TS, Li S, Franz E, Huang Z, Dan Li S, Campbell MJ, Huang K, Zhang Y. PseudoFuN: Deriving functional potentials of pseudogenes from integrative relationships with genes and microRNAs across 32 cancers. Gigascience. 8. PMID 31029062 DOI: 10.1093/Gigascience/Giz046  0.324
2019 Zhou Q, Lian Y, Zhang Y, Li L, Li H, Shen D, Zhou Y, Zhang M, Lu Y, Liu J, Xia Y, Wang XT. Platelet-derived microparticles from recurrent miscarriage associated with antiphospholipid antibody syndrome influence behaviours of trophoblast and endothelial cells. Molecular Human Reproduction. PMID 30953065 DOI: 10.1093/molehr/gaz019  0.307
2018 Frankish A, Diekhans M, Ferreira AM, Johnson R, Jungreis I, Loveland J, Mudge JM, Sisu C, Wright J, Armstrong J, Barnes I, Berry A, Bignell A, Carbonell Sala S, Chrast J, ... ... Zhang Y, et al. GENCODE reference annotation for the human and mouse genomes. Nucleic Acids Research. PMID 30357393 DOI: 10.1093/Nar/Gky955  0.515
2018 Kumar S, Warrel J, Mcgillivray P, Meyerson W, Li S, Salichos L, Harmanci A, Fundichely A, Chan C, Herrmann C, Nielsen M, Lochovsky L, Zhang Y, Li X, Khurana E, et al. Abstract 1279: Passenger mutation landscape in cancer genomes Cancer Research. 78: 1279-1279. DOI: 10.1158/1538-7445.Am2018-1279  0.489
2017 Zhang Y, Li S, Abyzov A, Gerstein MB. Landscape and variation of novel retroduplications in 26 human populations. Plos Computational Biology. 13: e1005567. PMID 28662076 DOI: 10.1371/Journal.Pcbi.1005567  0.54
2016 Qin X, Li J, Spence JD, Zhang Y, Li Y, Wang X, Wang B, Sun N, Chen F, Guo J, Yin D, Sun L, Tang G, He M, Fu J, et al. Folic Acid Therapy Reduces the First Stroke Risk Associated With Hypercholesterolemia Among Hypertensive Patients. Stroke; a Journal of Cerebral Circulation. PMID 27729579 DOI: 10.1161/STROKEAHA.116.014578  0.434
2016 Li W, Irani S, Crutchfield A, Hodge K, Matthews W, Patel P, Zhang YJ, Stone EM. Intramolecular cleavage of the hASRGL1 homodimer occurs in two stages. Biochemistry. PMID 26780688 DOI: 10.1021/Acs.Biochem.5B01157  0.411
2015 Sudmant PH, Rausch T, Gardner EJ, Handsaker RE, Abyzov A, Huddleston J, Zhang Y, Ye K, Jun G, Hsi-Yang Fritz M, Konkel MK, Malhotra A, Stütz AM, Shi X, Paolo Casale F, et al. An integrated map of structural variation in 2,504 human genomes. Nature. 526: 75-81. PMID 26432246 DOI: 10.1038/Nature15394  0.669
2015 He Y, Guo X, Yu ZH, Wu L, Gunawan AM, Zhang Y, Dixon JE, Zhang ZY. A potent and selective inhibitor for the UBLCP1 proteasome phosphatase. Bioorganic & Medicinal Chemistry. 23: 2798-809. PMID 25907364 DOI: 10.1016/J.Bmc.2015.03.066  0.391
2014 Gerstein MB, Rozowsky J, Yan KK, Wang D, Cheng C, Brown JB, Davis CA, Hillier L, Sisu C, Li JJ, Pei B, Harmanci AO, Duff MO, Djebali S, Alexander RP, ... ... Zhang Y, et al. Comparative analysis of the transcriptome across distant species. Nature. 512: 445-8. PMID 25164755 DOI: 10.1038/Nature13424  0.668
2014 Sisu C, Pei B, Leng J, Frankish A, Zhang Y, Balasubramanian S, Harte R, Wang D, Rutenberg-Schoenberg M, Clark W, Diekhans M, Rozowsky J, Hubbard T, Harrow J, Gerstein MB. Comparative analysis of pseudogenes across three phyla. Proceedings of the National Academy of Sciences of the United States of America. 111: 13361-6. PMID 25157146 DOI: 10.1073/Pnas.1407293111  0.536
2013 Zhang Y, Kweon HK, Shively C, Kumar A, Andrews PC. Towards systematic discovery of signaling networks in budding yeast filamentous growth stress response using interventional phosphorylation data. Plos Computational Biology. 9: e1003077. PMID 23825934 DOI: 10.1371/Journal.Pcbi.1003077  0.412
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