David Clemmer, Ph.D. - Publications

Affiliations: 
Chemistry Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Structure analysis of biological systems using mass spectrometry-based techniques

238 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Chen X, Raab SA, Poe T, Clemmer DE, Larriba-Andaluz C. Determination of Gas-Phase Ion Structures of Locally Polar Homopolymers Through High-Resolution Ion Mobility Spectrometry-Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 30993642 DOI: 10.1007/s13361-019-02184-9  0.6
2019 Dunbar CA, Rayaprolu V, Wang JC, Brown CJ, Leishman E, Jones-Burrage S, Trinidad JC, Bradshaw HB, Clemmer DE, Mukhopadhyay S, Jarrold MF. Dissecting the Components of Sindbis Virus from Arthropod and Vertebrate Hosts: Implications for Infectivity Differences. Acs Infectious Diseases. PMID 30986033 DOI: 10.1021/acsinfecdis.8b00356  1
2019 Conant CR, Fuller DR, El-Baba TJ, Zhang Z, Russell DH, Clemmer DE. Substance P in Solution: Trans-to-Cis Configurational Changes of Penultimate Prolines Initiate Non-enzymatic Peptide Bond Cleavages. Journal of the American Society For Mass Spectrometry. PMID 30980380 DOI: 10.1007/s13361-019-02159-w  0.68
2019 Conant CR, Fuller DR, Zhang Z, Woodall DW, Russell DH, Clemmer DE. Substance P in the Gas Phase: Conformational Changes and Dissociations Induced by Collisional Activation in a Drift Tube. Journal of the American Society For Mass Spectrometry. PMID 30980379 DOI: 10.1007/s13361-019-02160-3  0.68
2019 Fuller DR, Conant CR, El-Baba TJ, Zhang Z, Molloy KR, Zhang CS, Hales DA, Clemmer DE. Monitoring the stabilities of a mixture of peptides by mass-spectrometry-based techniques. European Journal of Mass Spectrometry (Chichester, England). 25: 73-81. PMID 30773926 DOI: 10.1177/1469066718798718  0.68
2018 Khanal N, Gaye MM, Clemmer DE. Multiple solution structures of the disordered peptide indolicidin from IMS-MS analysis. International Journal of Mass Spectrometry. 427: 52-58. PMID 30906201 DOI: 10.1016/j.ijms.2017.09.009  0.4
2018 Brown CJ, Kaufman T, Trinidad JC, Clemmer DE. Proteome changes in the aging head. International Journal of Mass Spectrometry. 425: 36-46. PMID 30906200 DOI: 10.1016/j.ijms.2018.01.003  0.76
2018 Beckett D, El-Baba TJ, Clemmer DE, Raghavachari K. Electronic Energies Are Not Enough: An Ion Mobility-Aided, Quantum Chemical Benchmark Analysis of HGPGG Conformers. Journal of Chemical Theory and Computation. PMID 30192543 DOI: 10.1021/acs.jctc.8b00648  0.68
2018 El-Baba TJ, Fuller DR, Hales DA, Russell DH, Clemmer DE. Solvent Mediation of Peptide Conformations: Polyproline Structures in Water, Methanol, Ethanol, and 1-Propanol as Determined by Ion Mobility Spectrometry-Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 30069641 DOI: 10.1007/s13361-018-2034-7  0.68
2018 Musbat L, Assis S, Dilger JM, El-Baba TJ, Fuller DR, Knudsen JL, Kiefer HV, Hirshfeld A, Friedman N, Andersen LH, Sheves M, Clemmer DE, Toker Y. Action and Ion Mobility Spectroscopy of a Shortened Retinal Derivative. Journal of the American Society For Mass Spectrometry. PMID 30062478 DOI: 10.1007/s13361-018-2033-8  0.72
2018 Fuller DR, Conant CR, El-Baba TJ, Brown CJ, Woodall DW, Russell DH, Clemmer DE. Conformationally regulated peptide bond cleavage in bradykinin. Journal of the American Chemical Society. PMID 30028131 DOI: 10.1021/jacs.8b04751  0.68
2018 Khanal N, Masellis C, Kamrath MZ, Clemmer DE, Rizzo TR. Cryogenic IR spectroscopy combined with ion mobility spectrometry for the analysis of human milk oligosaccharides. The Analyst. PMID 29541730 DOI: 10.1039/c8an00230d  0.4
2018 El-Baba TJ, Fuller DR, Woodall DW, Raab SA, Conant CR, Dilger JM, Toker Y, Williams ER, Russell DH, Clemmer DE. Melting proteins confined in nanodroplets with 10.6 μm light provides clues about early steps of denaturation. Chemical Communications (Cambridge, England). PMID 29536995 DOI: 10.1039/c7cc09829d  0.72
2018 Glauninger H, Zhang Y, Higgins KA, Jacobs AD, Martin JE, Fu Y, Coyne Rd HJ, Bruce KE, Maroney MJ, Clemmer DE, Capdevila DA, Giedroc DP. Metal-dependent allosteric activation and inhibition on the same molecular scaffold: the copper sensor CopY from Streptococcus pneumoniae. Chemical Science. 9: 105-118. PMID 29399317 DOI: 10.1039/c7sc04396a  0.4
2017 Jacobs AD, Jovan Jose KV, Horness R, Raghavachari K, Thielges MC, Clemmer DE. Cooperative Formation of Icosahedral Proline Clusters from Dimers. Journal of the American Society For Mass Spectrometry. PMID 29127569 DOI: 10.1007/s13361-017-1833-6  0.36
2017 Clemmer DE, Russell DH, Williams ER. Characterizing the Conformationome: Toward a Structural Understanding of the Proteome. Accounts of Chemical Research. 50: 556-560. PMID 28945417 DOI: 10.1021/acs.accounts.6b00548  0.68
2017 Wagner N, Clemmer DE, Russell DH. ESI-IM-MS and Collision-Induced Unfolding Provide Insight into the Linkage Dependent Interfacial Interactions of Covalently Linked Diubiquitin. Analytical Chemistry. PMID 28841006 DOI: 10.1021/acs.analchem.7b02932  0.68
2017 Masellis C, Khanal N, Kamrath MZ, Clemmer DE, Rizzo TR. Cryogenic Vibrational Spectroscopy Provides Unique Fingerprints for Glycan Identification. Journal of the American Society For Mass Spectrometry. PMID 28643189 DOI: 10.1007/s13361-017-1728-6  0.4
2017 Khanal N, Masellis C, Kamrath MZ, Clemmer DE, Rizzo TR. Glycosaminoglycan analysis by cryogenic messenger-tagging IR spectroscopy combined with IMS-MS. Analytical Chemistry. PMID 28636333 DOI: 10.1021/acs.analchem.7b01467  0.4
2017 El-Baba TJ, Woodall DW, Raab SA, Fuller DR, Laganowsky A, Russell DH, Clemmer DE. Melting Proteins: Evidence for Multiple Stable Structures upon Thermal Denaturation of Native Ubiquitin from IMS-MS Measurements. Journal of the American Chemical Society. PMID 28427262 DOI: 10.1021/jacs.7b02774  0.68
2017 Dilger JM, Glover MS, Clemmer DE. A Database of Transition-Metal-Coordinated Peptide Cross-Sections: Selective Interaction with Specific Amino Acid Residues. Journal of the American Society For Mass Spectrometry. PMID 28357817 DOI: 10.1007/s13361-016-1592-9  0.72
2017 Kim D, Wagner N, Wooding K, Clemmer DE, Russell DH. Ions from Solution to the Gas Phase: A Molecular Dynamics Simulation of the Structural Evolution of Substance P During Desolvation of Charged Nanodroplets Generated by Electrospray Ionization. Journal of the American Chemical Society. PMID 28128939 DOI: 10.1021/jacs.6b10731  0.68
2016 El-Baba TJ, Kim D, Rogers DB, Khan FA, Hales DA, Russell DH, Clemmer DE. Long-Lived Intermediates in a Cooperative Two-State Folding Transition. The Journal of Physical Chemistry. B. 120: 12040-12046. PMID 27933943 DOI: 10.1021/acs.jpcb.6b08932  0.96
2016 Zhu F, Clemmer DE, Trinidad JC. Characterization of lectin binding affinities via direct LC-MS profiling: implications for glycopeptide enrichment and separation strategies. The Analyst. PMID 27845783 DOI: 10.1039/c6an02043g  0.84
2016 Barr JD, Shi L, Russell DH, Clemmer DE, Holliday AE. Following a Folding Transition with Capillary Electrophoresis and Ion Mobility Spectrometry. Analytical Chemistry. PMID 27809500 DOI: 10.1021/acs.analchem.6b02424  0.84
2016 Fuller DR, Glover MS, Pierson NA, Kim D, Russell DH, Clemmer DE. Cis→Trans Isomerization of Pro(7) in Oxytocin Regulates Zn(2+) Binding. Journal of the American Society For Mass Spectrometry. PMID 27154022 DOI: 10.1007/s13361-016-1410-4  1
2016 Chatterjee B, Makarov A, Clemmer DE, Steen H, Steen J, Saffell-Clemmer W, Moghekar AR, Rao CM, Bradshaw RA, Thakur SS. Proteomics in India: A Report on Brainstorming Meeting at Hyderabad, India. Molecular & Cellular Proteomics : McP. PMID 27114450 DOI: 10.1074/mcp.O115.055020  1
2016 Shi L, Holliday AE, Bohrer BC, Kim D, Servage KA, Russell DH, Clemmer DE. "Wet" Versus "Dry" Folding of Polyproline. Journal of the American Society For Mass Spectrometry. PMID 27059978 DOI: 10.1007/s13361-016-1372-6  1
2016 Glover MS, Dilger JM, Acton MD, Arnold RJ, Radivojac P, Clemmer DE. Examining the Influence of Phosphorylation on Peptide Ion Structure by Ion Mobility Spectrometry-Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 26860087 DOI: 10.1007/s13361-016-1343-y  1
2016 Gaye MM, Nagy G, Clemmer DE, Pohl NL. Multidimensional Analysis of 16 Glucose Isomers by Ion Mobility Spectrometry. Analytical Chemistry. PMID 26799269 DOI: 10.1021/acs.analchem.5b04280  1
2015 Servage KA, Silveira JA, Fort KL, Clemmer DE, Russell DH. Water-Mediated Dimerization of Ubiquitin Ions Captured by Cryogenic Ion Mobility-Mass Spectrometry. The Journal of Physical Chemistry Letters. 4947-4951. PMID 26625010 DOI: 10.1021/acs.jpclett.5b02382  1
2015 Ewing MA, Glover MS, Clemmer DE. Hybrid ion mobility and mass spectrometry as a separation tool. Journal of Chromatography. A. PMID 26592562 DOI: 10.1016/j.chroma.2015.10.080  1
2015 Sarbu M, Zhu F, Peter-Katalinić J, Clemmer DE, Zamfir AD. Application of ion mobility tandem mass spectrometry to compositional and structural analysis of glycopeptides extracted from the urine of a patient diagnosed with Schindler disease. Rapid Communications in Mass Spectrometry : Rcm. 29: 1929-37. PMID 26443390 DOI: 10.1002/rcm.7288  0.84
2015 Shi L, Holliday AE, Glover MS, Ewing MA, Russell DH, Clemmer DE. Ion Mobility-Mass Spectrometry Reveals the Energetics of Intermediates that Guide Polyproline Folding. Journal of the American Society For Mass Spectrometry. PMID 26362047 DOI: 10.1007/s13361-015-1255-2  1
2015 Jacobs AD, Chang FM, Morrison L, Dilger JM, Wysocki VH, Clemmer DE, Giedroc DP. Resolution of Stepwise Cooperativities of Copper Binding by the Homotetrameric Copper-Sensitive Operon Repressor (CsoR): Impact on Structure and Stability. Angewandte Chemie (International Ed. in English). 54: 12795-9. PMID 26332992 DOI: 10.1002/anie.201506349  1
2015 Gaye MM, Kurulugama R, Clemmer DE. Investigating carbohydrate isomers by IMS-CID-IMS-MS: precursor and fragment ion cross-sections. The Analyst. 140: 6922-32. PMID 26306702 DOI: 10.1039/c5an00840a  1
2015 Lee S, Glover MS, Reilly JP, Clemmer DE. Photosynthesis of a Combinatorial Peptide Library in the Gas Phase. Analytical Chemistry. PMID 26285100 DOI: 10.1021/acs.analchem.5b02179  1
2015 Khanal N, Pejaver V, Li Z, Radivojac P, Clemmer DE, Mukhopadhyay S. Position of Proline Mediates the Reactivity of S-Palmitoylation. Acs Chemical Biology. PMID 26255674 DOI: 10.1021/acschembio.5b00429  1
2015 Glover MS, Bellinger EP, Radivojac P, Clemmer DE. Penultimate Proline in Neuropeptides. Analytical Chemistry. 87: 8466-72. PMID 26192015 DOI: 10.1021/acs.analchem.5b01889  1
2015 Servage KA, Fort KL, Silveira JA, Shi L, Clemmer DE, Russell DH. Unfolding of Hydrated Alkyl Diammonium Cations Revealed by Cryogenic Ion Mobility-Mass Spectrometry. Journal of the American Chemical Society. 137: 8916-9. PMID 26154946 DOI: 10.1021/jacs.5b05448  1
2015 Shi L, Holliday AE, Khanal N, Russell DH, Clemmer DE. Configurationally-Coupled Protonation of Polyproline-7. Journal of the American Chemical Society. PMID 26115587 DOI: 10.1021/jacs.5b04287  1
2015 Masson A, Kamrath MZ, Perez MA, Glover MS, Rothlisberger U, Clemmer DE, Rizzo TR. Infrared Spectroscopy of Mobility-Selected H(+)-Gly-Pro-Gly-Gly (GPGG). Journal of the American Society For Mass Spectrometry. PMID 26091889 DOI: 10.1007/s13361-015-1172-4  1
2015 Larriba-Andaluz C, Fernández-García J, Ewing MA, Hogan CJ, Clemmer DE. Gas molecule scattering & ion mobility measurements for organic macro-ions in He versus N2 environments. Physical Chemistry Chemical Physics : Pccp. 17: 15019-29. PMID 25988389 DOI: 10.1039/c5cp01017a  1
2015 Snijder J, van de Waterbeemd M, Glover MS, Shi L, Clemmer DE, Heck AJ. Conformational landscape and pathway of disulfide bond reduction of human alpha defensin. Protein Science : a Publication of the Protein Society. PMID 25970658 DOI: 10.1002/pro.2694  1
2015 Ewing MA, Conant CR, Zucker SM, Griffith KJ, Clemmer DE. Selected overtone mobility spectrometry. Analytical Chemistry. 87: 5132-8. PMID 25892116 DOI: 10.1021/ac504555u  1
2015 Zhu F, Trinidad JC, Clemmer DE. Glycopeptide Site Heterogeneity and Structural Diversity Determined by Combined Lectin Affinity Chromatography/IMS/CID/MS Techniques. Journal of the American Society For Mass Spectrometry. 26: 1092-102. PMID 25840811 DOI: 10.1007/s13361-015-1110-5  1
2015 Pierson NA, Clemmer DE. An IMS-IMS threshold method for semi-quantitative determination of activation barriers: Interconversion of proline cis↔trans forms in triply protonated bradykinin. International Journal of Mass Spectrometry. 377: 646-654. PMID 25838788 DOI: 10.1016/j.ijms.2014.07.012  1
2015 Dilger J, Musbat L, Sheves M, Bochenkova AV, Clemmer DE, Toker Y. Direct measurement of the isomerization barrier of the isolated retinal chromophore. Angewandte Chemie (International Ed. in English). 54: 4748-52. PMID 25756226 DOI: 10.1002/anie.201411894  1
2015 Glover MS, Shi L, Fuller DR, Arnold RJ, Radivojac P, Clemmer DE. On the split personality of penultimate proline. Journal of the American Society For Mass Spectrometry. 26: 444-52. PMID 25503299 DOI: 10.1007/s13361-014-1049-y  1
2015 Zhu F, Glover MS, Shi H, Trinidad JC, Clemmer DE. Populations of metal-glycan structures influence MS fragmentation patterns. Journal of the American Society For Mass Spectrometry. 26: 25-35. PMID 25315458 DOI: 10.1007/s13361-014-1000-2  1
2015 Sarbu M, Zhu F, Peter-Katalinic J, Clemmer DE, Zamfir AD. Application of ion mobility tandem mass spectrometry to compositional and structural analysis of glycopeptides extracted from the urine of a patient diagnosed with Schindler disease Rapid Communications in Mass Spectrometry. 29: 1929-1937. DOI: 10.1002/rcm.7288  1
2014 Li Z, Dilger JM, Pejaver V, Smiley D, Arnold RJ, Mooney SD, Mukhopadhyay S, Radivojac P, Clemmer DE. Intrinsic Size Parameters for Palmitoylated and Carboxyamidomethylated Peptides. International Journal of Mass Spectrometry. 368: 6-14. PMID 26023288 DOI: 10.1016/j.ijms.2014.04.009  1
2014 Fort KL, Silveira JA, Pierson NA, Servage KA, Clemmer DE, Russell DH. From solution to the gas phase: factors that influence kinetic trapping of substance P in the gas phase. The Journal of Physical Chemistry. B. 118: 14336-44. PMID 25402008 DOI: 10.1021/jp5103687  1
2014 Shi L, Holliday AE, Shi H, Zhu F, Ewing MA, Russell DH, Clemmer DE. Characterizing intermediates along the transition from polyproline I to polyproline II using ion mobility spectrometry-mass spectrometry. Journal of the American Chemical Society. 136: 12702-11. PMID 25105554 DOI: 10.1021/ja505899g  1
2014 Larriba C, Fernandez de la Mora J, Clemmer DE. Electrospray ionization mechanisms for large polyethylene glycol chains studied through tandem ion mobility spectrometry. Journal of the American Society For Mass Spectrometry. 25: 1332-45. PMID 24924517 DOI: 10.1007/s13361-014-0885-0  1
2014 Johnson AR, Dilger JM, Glover MS, Clemmer DE, Carlson EE. Negatively-charged helices in the gas phase. Chemical Communications (Cambridge, England). 50: 8849-51. PMID 24901462 DOI: 10.1039/c4cc03257h  1
2014 Shi H, Atlasevich N, Merenbloom SI, Clemmer DE. Solution dependence of the collisional activation of ubiquitin [M + 7H](7+) ions. Journal of the American Society For Mass Spectrometry. 25: 2000-8. PMID 24658799 DOI: 10.1007/s13361-014-0834-y  1
2014 Shi H, Clemmer DE. Evidence for two new solution states of ubiquitin by IMS-MS analysis. The Journal of Physical Chemistry. B. 118: 3498-506. PMID 24625065 DOI: 10.1021/jp4097327  1
2014 Wyttenbach T, Pierson NA, Clemmer DE, Bowers MT. Ion mobility analysis of molecular dynamics. Annual Review of Physical Chemistry. 65: 175-96. PMID 24328447 DOI: 10.1146/annurev-physchem-040513-103644  1
2013 Silveira JA, Fort KL, Kim D, Servage KA, Pierson NA, Clemmer DE, Russell DH. From solution to the gas phase: stepwise dehydration and kinetic trapping of substance P reveals the origin of peptide conformations. Journal of the American Chemical Society. 135: 19147-53. PMID 24313458 DOI: 10.1021/ja4114193  1
2013 Zucker SM, Ewing MA, Clemmer DE. Gridless overtone mobility spectrometry. Analytical Chemistry. 85: 10174-9. PMID 24125033 DOI: 10.1021/ac401568r  1
2013 Glaskin RS, Ewing MA, Clemmer DE. Ion trapping for ion mobility spectrometry measurements in a cyclical drift tube. Analytical Chemistry. 85: 7003-8. PMID 23855480 DOI: 10.1021/ac4015066  1
2013 Dilger JM, Valentine SJ, Glover MS, Clemmer DE. A database of alkaline-earth-coordinated peptide cross sections: insight into general aspects of structure. Journal of the American Society For Mass Spectrometry. 24: 768-79. PMID 23512423 DOI: 10.1007/s13361-013-0579-z  1
2013 Ewing MA, Zucker SM, Valentine SJ, Clemmer DE. Overtone mobility spectrometry: part 5. Simulations and analytical expressions describing overtone limits. Journal of the American Society For Mass Spectrometry. 24: 615-21. PMID 23468094 DOI: 10.1007/s13361-012-0559-8  1
2013 Pierson NA, Chen L, Russell DH, Clemmer DE. Cis-trans isomerizations of proline residues are key to bradykinin conformations. Journal of the American Chemical Society. 135: 3186-92. PMID 23373819 DOI: 10.1021/ja3114505  1
2013 Shi H, Gu L, Clemmer DE, Robinson RA. Effects of Fe(II)/H2O2 oxidation on ubiquitin conformers measured by ion mobility-mass spectrometry. The Journal of Physical Chemistry. B. 117: 164-73. PMID 23211023 DOI: 10.1021/jp3099544  1
2013 Holliday AE, Atlasevich N, Myung S, Plasencia MD, Valentine SJ, Clemmer DE. Oscillations of chiral preference in proline clusters. The Journal of Physical Chemistry. A. 117: 1035-41. PMID 22668126 DOI: 10.1021/jp302677n  1
2013 Glover MS, Dilger JM, Zhu F, Clemmer DE. The binding of Ca2+, Co2+, Ni2+, Cu 2+, and Zn2+ cations to angiotensin i determined by mass spectrometry based techniques International Journal of Mass Spectrometry. 354: 318-325. DOI: 10.1016/j.ijms.2013.06.014  1
2012 Gaye MM, Valentine SJ, Hu Y, Mirjankar N, Hammoud ZT, Mechref Y, Lavine BK, Clemmer DE. Ion mobility-mass spectrometry analysis of serum N-linked glycans from esophageal adenocarcinoma phenotypes. Journal of Proteome Research. 11: 6102-10. PMID 23126309 DOI: 10.1021/pr300756e  1
2012 Zhu F, Lee S, Valentine SJ, Reilly JP, Clemmer DE. Mannose7 glycan isomer characterization by IMS-MS/MS analysis. Journal of the American Society For Mass Spectrometry. 23: 2158-66. PMID 23055077 DOI: 10.1007/s13361-012-0491-y  1
2012 Atlasevich N, Holliday AE, Valentine SJ, Clemmer DE. Chirality and packing in small proline clusters. The Journal of Physical Chemistry. B. 116: 11442-6. PMID 22916685 DOI: 10.1021/jp3069915  1
2012 Atlasevich N, Holliday AE, Valentine SJ, Clemmer DE. Collisional activation of [14Pro+2H]2+ clusters: chiral dependence of evaporation and fission processes. The Journal of Physical Chemistry. B. 116: 7644-51. PMID 22668003 DOI: 10.1021/jp303778w  1
2012 Lee S, Valentine SJ, Reilly JP, Clemmer DE. Analyzing a Mixture of Disaccharides by IMS-VUVPD-MS. International Journal of Mass Spectrometry. 309: 161-167. PMID 22518093 DOI: 10.1016/j.ijms.2011.09.013  1
2012 Lee S, Li Z, Valentine SJ, Zucker SM, Webber N, Reilly JP, Clemmer DE. Extracted Fragment Ion Mobility Distributions: A New Method for Complex Mixture Analysis. International Journal of Mass Spectrometry. 309: 154-160. PMID 22518092 DOI: 10.1016/j.ijms.2011.09.011  1
2012 Shi H, Pierson NA, Valentine SJ, Clemmer DE. Conformation types of ubiquitin [M+8H]8+ Ions from water:methanol solutions: evidence for the N and A States in aqueous solution. The Journal of Physical Chemistry. B. 116: 3344-52. PMID 22315998 DOI: 10.1021/jp210797x  1
2012 Isailovic D, Plasencia MD, Gaye MM, Stokes ST, Kurulugama RT, Pungpapong V, Zhang M, Kyselova Z, Goldman R, Mechref Y, Novotny MV, Clemmer DE. Delineating diseases by IMS-MS profiling of serum N-linked glycans. Journal of Proteome Research. 11: 576-85. PMID 22148953 DOI: 10.1021/pr200777u  1
2012 Rodgers MT, Clemmer DE. An appreciation International Journal of Mass Spectrometry. 330: 2-3. DOI: 10.1016/j.ijms.2012.11.003  1
2012 Dilger JM, Valentine SJ, Glover MS, Ewing MA, Clemmer DE. A database of alkali metal-containing peptide cross sections: Influence of metals on size parameters for specific amino acids International Journal of Mass Spectrometry. 330: 35-45. DOI: 10.1016/j.ijms.2012.05.001  1
2012 Lee S, Julian RR, Valentine SJ, Reilly JP, Clemmer DE. Biomolecular condensation via ultraviolet excitation in vacuo International Journal of Mass Spectrometry. 316: 6-11. DOI: 10.1016/j.ijms.2012.02.015  1
2011 Bohrer BC, Clemmer DE. Biologically-inspired peptide reagents for enhancing IMS-MS analysis of carbohydrates. Journal of the American Society For Mass Spectrometry. 22: 1602-9. PMID 21953263 DOI: 10.1007/s13361-011-0168-y  1
2011 Zucker SM, Lee S, Webber N, Valentine SJ, Reilly JP, Clemmer DE. An ion mobility/ion trap/photodissociation instrument for characterization of ion structure. Journal of the American Society For Mass Spectrometry. 22: 1477-85. PMID 21953250 DOI: 10.1007/s13361-011-0179-8  1
2011 Jung JE, Pierson NA, Marquardt A, Scheffner M, Przybylski M, Clemmer DE. Differentiation of compact and extended conformations of di-ubiquitin conjugates with lysine-specific isopeptide linkages by ion mobility-mass spectrometry. Journal of the American Society For Mass Spectrometry. 22: 1463-71. PMID 21953201 DOI: 10.1007/s13361-011-0158-0  1
2011 Kurulugama RT, Nachtigall FM, Valentine SJ, Clemmer DE. Overtone mobility spectrometry: part 4. OMS-OMS analyses of complex mixtures. Journal of the American Society For Mass Spectrometry. 22: 2049-60. PMID 21952760 DOI: 10.1007/s13361-011-0217-6  1
2011 Lee S, Valentine SJ, Reilly JP, Clemmer DE. Controlled formation of peptide bonds in the gas phase. Journal of the American Chemical Society. 133: 15834-7. PMID 21910477 DOI: 10.1021/ja205471n  1
2011 Pierson NA, Chen L, Valentine SJ, Russell DH, Clemmer DE. Number of solution states of bradykinin from ion mobility and mass spectrometry measurements. Journal of the American Chemical Society. 133: 13810-3. PMID 21830821 DOI: 10.1021/ja203895j  1
2011 Bohrer BC, Clemmer DE. Shift reagents for multidimensional ion mobility spectrometry-mass spectrometry analysis of complex peptide mixtures: evaluation of 18-crown-6 ether complexes. Analytical Chemistry. 83: 5377-85. PMID 21609128 DOI: 10.1021/ac200892r  1
2011 Li Z, Valentine SJ, Clemmer DE. Complexation of amino compounds by 18C6 improves selectivity by IMS-IMS-MS: application to petroleum characterization. Journal of the American Society For Mass Spectrometry. 22: 817-27. PMID 21472516 DOI: 10.1007/s13361-011-0105-0  1
2011 Valentine SJ, Kurulugama RT, Clemmer DE. Overtone mobility spectrometry: part 3. On the origin of peaks. Journal of the American Society For Mass Spectrometry. 22: 804-16. PMID 21472515 DOI: 10.1007/s13361-011-0087-y  1
2011 Bohrer BC, Atlasevich N, Clemmer DE. Transitions between elongated conformations of ubiquitin [M+11H]11+ enhance hydrogen/deuterium exchange. The Journal of Physical Chemistry. B. 115: 4509-15. PMID 21449553 DOI: 10.1021/jp2008495  1
2011 Valentine SJ, Ewing MA, Dilger JM, Glover MS, Geromanos S, Hughes C, Clemmer DE. Using ion mobility data to improve peptide identification: intrinsic amino acid size parameters. Journal of Proteome Research. 10: 2318-29. PMID 21417239 DOI: 10.1021/pr1011312  1
2010 Lee S, Ewing MA, Nachtigall FM, Kurulugama RT, Valentine SJ, Clemmer DE. Determination of cross sections by overtone mobility spectrometry: evidence for loss of unstable structures at higher overtones. The Journal of Physical Chemistry. B. 114: 12406-15. PMID 20822127 DOI: 10.1021/jp1060123  1
2010 Shvartsburg AA, Clemmer DE, Smith RD. Isotopic effect on ion mobility and separation of isotopomers by high-field ion mobility spectrometry. Analytical Chemistry. 82: 8047-51. PMID 20815340 DOI: 10.1021/ac101992d  1
2010 Glaskin RS, Valentine SJ, Clemmer DE. A scanning frequency mode for ion cyclotron mobility spectrometry. Analytical Chemistry. 82: 8266-71. PMID 20809629 DOI: 10.1021/ac1017474  1
2010 Robinson RA, Kellie JF, Kaufman TC, Clemmer DE. Insights into aging through measurements of the Drosophila proteome as a function of temperature. Mechanisms of Ageing and Development. 131: 584-90. PMID 20732347 DOI: 10.1016/j.mad.2010.08.004  1
2010 Bohrer BC, Li YF, Reilly JP, Clemmer DE, DiMarchi RD, Radivojac P, Tang H, Arnold RJ. Combinatorial libraries of synthetic peptides as a model for shotgun proteomics. Analytical Chemistry. 82: 6559-68. PMID 20669997 DOI: 10.1021/ac100910a  1
2010 Kim TY, Valentine SJ, Clemmer DE, Reilly JP. Gas-phase conformation-specific photofragmentation of proline-containing peptide ions. Journal of the American Society For Mass Spectrometry. 21: 1455-65. PMID 20483641 DOI: 10.1016/j.jasms.2010.04.007  1
2010 Pierson NA, Valentine SJ, Clemmer DE. Evidence for a quasi-equilibrium distribution of states for bradykinin [M + 3H]3+ ions in the gas phase. The Journal of Physical Chemistry. B. 114: 7777-83. PMID 20469905 DOI: 10.1021/jp102478k  1
2010 Liu X, Afrane M, Clemmer DE, Zhong G, Nelson DE. Identification of Chlamydia trachomatis outer membrane complex proteins by differential proteomics. Journal of Bacteriology. 192: 2852-60. PMID 20348250 DOI: 10.1128/JB.01628-09  1
2009 Clemmer DE, Valentine SJ. Bioanalytical chemistry: Protein oligomers frozen in time. Nature Chemistry. 1: 257-8. PMID 21378861 DOI: 10.1038/nchem.264  1
2009 Xun Z, Kaufman TC, Clemmer DE. Stable isotope labeling and label-free proteomics of Drosophila parkin null mutants. Journal of Proteome Research. 8: 4500-10. PMID 19705877 DOI: 10.1021/pr9006238  1
2009 Valentine SJ, Clemmer DE. Treatise on the measurement of molecular masses with ion mobility spectrometry. Analytical Chemistry. 81: 5876-80. PMID 19548697 DOI: 10.1021/ac900255a  1
2009 Valentine SJ, Stokes ST, Kurulugama RT, Nachtigall FM, Clemmer DE. Overtone mobility spectrometry: part 2. Theoretical considerations of resolving power. Journal of the American Society For Mass Spectrometry. 20: 738-50. PMID 19230705 DOI: 10.1016/j.jasms.2009.01.001  1
2009 Kurulugama RT, Nachtigall FM, Lee S, Valentine SJ, Clemmer DE. Overtone mobility spectrometry: part 1. Experimental observations. Journal of the American Society For Mass Spectrometry. 20: 729-37. PMID 19195909 DOI: 10.1016/j.jasms.2008.11.022  1
2009 Merenbloom SI, Glaskin RS, Henson ZB, Clemmer DE. High-resolution ion cyclotron mobility spectrometry. Analytical Chemistry. 81: 1482-7. PMID 19143495 DOI: 10.1021/ac801880a  1
2009 Valentine SJ, Kurulugama RT, Bohrer BC, Merenbloom SI, Sowell RA, Mechref Y, Clemmer DE. Developing IMS-IMS-MS for rapid characterization of abundant proteins in human plasma International Journal of Mass Spectrometry. 283: 149-160. DOI: 10.1016/j.ijms.2009.02.030  1
2009 Trimpin S, Tan B, Bohrer BC, O'Dell DK, Merenbloom SI, Pazos MX, Clemmer DE, Walker JM. Profiling of phospholipids and related lipid structures using multidimensional ion mobility spectrometry-mass spectrometry International Journal of Mass Spectrometry. 287: 58-69. DOI: 10.1016/j.ijms.2008.12.020  1
2008 Bohrer BC, Merenbloom SI, Koeniger SL, Hilderbrand AE, Clemmer DE. Biomolecule analysis by ion mobility spectrometry. Annual Review of Analytical Chemistry (Palo Alto, Calif.). 1: 293-327. PMID 20636082 DOI: 10.1146/annurev.anchem.1.031207.113001  1
2008 Trimpin S, Clemmer DE. Ion mobility spectrometry/mass spectrometry snapshots for assessing the molecular compositions of complex polymeric systems. Analytical Chemistry. 80: 9073-83. PMID 19551934 DOI: 10.1021/ac801573n  1
2008 Plasencia MD, Isailovic D, Merenbloom SI, Mechref Y, Novotny MV, Clemmer DE. Resolving and assigning N-linked glycan structural isomers from ovalbumin by IMS-MS. Journal of the American Society For Mass Spectrometry. 19: 1706-15. PMID 18760624 DOI: 10.1016/j.jasms.2008.07.020  1
2008 Xun Z, Kaufman TC, Clemmer DE. Proteome response to the panneural expression of human wild-type alpha-synuclein: a Drosophila model of Parkinson's disease. Journal of Proteome Research. 7: 3911-21. PMID 18683964 DOI: 10.1021/pr800207h  1
2008 Kurulugama RT, Valentine SJ, Sowell RA, Clemmer DE. Development of a high-throughput IMS-IMS-MS approach for analyzing mixtures of biomolecules. Journal of Proteomics. 71: 318-31. PMID 18590839 DOI: 10.1016/j.jprot.2008.06.010  1
2008 Xun Z, Sowell RA, Kaufman TC, Clemmer DE. Quantitative proteomics of a presymptomatic A53T alpha-synuclein Drosophila model of Parkinson disease. Molecular & Cellular Proteomics : McP. 7: 1191-203. PMID 18353766 DOI: 10.1074/mcp.M700467-MCP200  1
2008 Merenbloom SI, Koeniger SL, Bohrer BC, Valentine SJ, Clemmer DE. Improving the efficiency of IMS-IMS by a combing technique. Analytical Chemistry. 80: 1918-27. PMID 18290667 DOI: 10.1021/ac7018602  1
2008 Isailovic D, Kurulugama RT, Plasencia MD, Stokes ST, Kyselova Z, Goldman R, Mechref Y, Novotny MV, Clemmer DE. Profiling of human serum glycans associated with liver cancer and cirrhosis by IMS-MS. Journal of Proteome Research. 7: 1109-17. PMID 18237112 DOI: 10.1021/pr700702r  1
2008 Polfer NC, Bohrer BC, Plasencia MD, Paizs B, Clemmer DE. On the dynamics of fragment isomerization in collision-induced dissociation of peptides. The Journal of Physical Chemistry. A. 112: 1286-93. PMID 18215025 DOI: 10.1021/jp0763937  1
2008 Alves P, Arnold RJ, Clemmer DE, Li Y, Reilly JP, Sheng Q, Tang H, Xun Z, Zeng R, Radivojac P. Fast and accurate identification of semi-tryptic peptides in shotgun proteomics. Bioinformatics (Oxford, England). 24: 102-9. PMID 18033797 DOI: 10.1093/bioinformatics/btm545  1
2007 Trimpin S, Plasencia M, Isailovic D, Clemmer DE. Resolving oligomers from fully grown polymers with IMS-MS. Analytical Chemistry. 79: 7965-74. PMID 17887728 DOI: 10.1021/ac071575i  1
2007 Trimpin S, Clemmer DE, McEwen CN. Charge-remote fragmentation of lithiated fatty acids on a TOF-TOF instrument using matrix-ionization. Journal of the American Society For Mass Spectrometry. 18: 1967-72. PMID 17881244 DOI: 10.1016/j.jasms.2007.08.013  1
2007 Sowell RA, Hersberger KE, Kaufman TC, Clemmer DE. Examining the proteome of Drosophila across organism lifespan. Journal of Proteome Research. 6: 3637-47. PMID 17696518 DOI: 10.1021/pr070224h  1
2007 Xun Z, Sowell RA, Kaufman TC, Clemmer DE. Lifetime proteomic profiling of an A30P alpha-synuclein Drosophila model of Parkinson's disease. Journal of Proteome Research. 6: 3729-38. PMID 17683129 DOI: 10.1021/pr0700504  1
2007 Liu X, Miller BR, Rebec GV, Clemmer DE. Protein expression in the striatum and cortex regions of the brain for a mouse model of Huntington's disease. Journal of Proteome Research. 6: 3134-42. PMID 17625815 DOI: 10.1021/pr070092s  1
2007 Liu X, Valentine SJ, Plasencia MD, Trimpin S, Naylor S, Clemmer DE. Mapping the human plasma proteome by SCX-LC-IMS-MS. Journal of the American Society For Mass Spectrometry. 18: 1249-64. PMID 17553692 DOI: 10.1016/j.jasms.2007.04.012  1
2007 Merenbloom SI, Bohrer BC, Koeniger SL, Clemmer DE. Assessing the peak capacity of IMS-IMS separations of tryptic peptide ions in He at 300 K. Analytical Chemistry. 79: 515-22. PMID 17222015 DOI: 10.1021/ac061567m  1
2007 Xun Z, Sowell RA, Kaufman TC, Clemmer DE. Protein expression in a Drosophila model of Parkinson's disease. Journal of Proteome Research. 6: 348-57. PMID 17203978 DOI: 10.1021/pr060488o  1
2007 Koeniger SL, Clemmer DE. Resolution and structural transitions of elongated states of ubiquitin. Journal of the American Society For Mass Spectrometry. 18: 322-31. PMID 17084091 DOI: 10.1016/j.jasms.2006.09.025  1
2006 Myung S, Lorton KP, Merenbloom SI, Fioroni M, Koeniger SL, Julian RR, Baik MH, Clemmer DE. Evidence for spontaneous resolution of icosahedral proline. Journal of the American Chemical Society. 128: 15988-9. PMID 17165723 DOI: 10.1021/ja066278u  1
2006 Valentine SJ, Plasencia MD, Liu X, Krishnan M, Naylor S, Udseth HR, Smith RD, Clemmer DE. Toward plasma proteome profiling with ion mobility-mass spectrometry. Journal of Proteome Research. 5: 2977-84. PMID 17081049 DOI: 10.1021/pr060232i  1
2006 Hilderbrand AE, Myung S, Clemmer DE. Exploring crown ethers as shift reagents for ion mobility spectrometry. Analytical Chemistry. 78: 6792-800. PMID 17007498 DOI: 10.1021/ac060439v  1
2006 Koeniger SL, Merenbloom SI, Sevugarajan S, Clemmer DE. Transfer of structural elements from compact to extended states in unsolvated ubiquitin. Journal of the American Chemical Society. 128: 11713-9. PMID 16939296 DOI: 10.1021/ja062137g  1
2006 Myung S, Fioroni M, Julian RR, Koeniger SL, Baik MH, Clemmer DE. Chirally directed formation of nanometer-scale proline clusters. Journal of the American Chemical Society. 128: 10833-9. PMID 16910678 DOI: 10.1021/ja0622711  1
2006 Valentine SJ, Sevugarajan S, Kurulugama RT, Koeniger SL, Merenbloom SI, Bohrer BC, Clemmer DE. Split-field drift tube/mass spectrometry and isotopic labeling techniques for determination of single amino acid polymorphisms. Journal of Proteome Research. 5: 1879-87. PMID 16889409 DOI: 10.1021/pr060068z  1
2006 Tang H, Arnold RJ, Alves P, Xun Z, Clemmer DE, Novotny MV, Reilly JP, Radivojac P. A computational approach toward label-free protein quantification using predicted peptide detectability. Bioinformatics (Oxford, England). 22: e481-8. PMID 16873510 DOI: 10.1093/bioinformatics/btl237  1
2006 Koeniger SL, Merenbloom SI, Valentine SJ, Jarrold MF, Udseth HR, Smith RD, Clemmer DE. An IMS-IMS analogue of MS-MS. Analytical Chemistry. 78: 4161-74. PMID 16771547 DOI: 10.1021/ac051060w  1
2006 Merenbloom SI, Koeniger SL, Valentine SJ, Plasencia MD, Clemmer DE. IMS-IMS and IMS-IMS-IMS/MS for separating peptide and protein fragment ions. Analytical Chemistry. 78: 2802-9. PMID 16615796 DOI: 10.1021/ac052208e  1
2006 Koeniger SL, Merenbloom SI, Clemmer DE. Evidence for many resolvable structures within conformation types of electrosprayed ubiquitin ions. The Journal of Physical Chemistry. B. 110: 7017-21. PMID 16571016 DOI: 10.1021/jp056165h  1
2006 Myung S, Wiseman JM, Valentine SJ, Takats Z, Cooks RG, Clemmer DE. Coupling desorption electrospray ionization with ion mobility/mass spectrometry for analysis of protein structure: evidence for desorption of folded and denatured States. The Journal of Physical Chemistry. B. 110: 5045-51. PMID 16526747 DOI: 10.1021/jp052663e  1
2005 Hilderbrand AE, Clemmer DE. Determination of sequence-specific intrinsic size parameters from cross sections for 162 tripeptides. The Journal of Physical Chemistry. B. 109: 11802-9. PMID 16852449 DOI: 10.1021/jp050761u  1
2005 Julian RR, Myung S, Clemmer DE. Do homochiral aggregates have an entropic advantage? The Journal of Physical Chemistry. B. 109: 440-4. PMID 16851034 DOI: 10.1021/jp046478x  1
2005 Valentine SJ, Liu X, Plasencia MD, Hilderbrand AE, Kurulugama RT, Koeniger SL, Clemmer DE. Developing liquid chromatography ion mobility mass spectometry techniques. Expert Review of Proteomics. 2: 553-65. PMID 16097888 DOI: 10.1586/14789450.2.4.553  1
2005 Taraszka JA, Gao X, Valentine SJ, Sowell RA, Koeniger SL, Miller DF, Kaufman TC, Clemmer DE. Proteome profiling for assessing diversity: analysis of individual heads of Drosophila melanogaster using LC-ion mobility-MS. Journal of Proteome Research. 4: 1238-47. PMID 16083273 DOI: 10.1021/pr050037o  1
2005 Taraszka JA, Kurulugama R, Sowell RA, Valentine SJ, Koeniger SL, Arnold RJ, Miller DF, Kaufman TC, Clemmer DE. Mapping the proteome of Drosophila melanogaster: analysis of embryos and adult heads by LC-IMS-MS methods. Journal of Proteome Research. 4: 1223-37. PMID 16083272 DOI: 10.1021/pr050038g  1
2005 Myung S, Pink M, Baik MH, Clemmer DE. DL-Proline. Acta Crystallographica. Section C, Crystal Structure Communications. 61: o506-8. PMID 16082102 DOI: 10.1107/S0108270105021001  1
2005 Badman ER, Myung S, Clemmer DE. Evidence for unfolding and refolding of gas-phase cytochrome C ions in a Paul trap. Journal of the American Society For Mass Spectrometry. 16: 1493-7. PMID 16019223 DOI: 10.1016/j.jasms.2005.04.013  1
2005 Wong RL, Williams ER, Counterman AE, Clemmer DE. Evaluation of ion mobility spectroscopy for determining charge-solvated versus salt-bridge structures of protonated trimers. Journal of the American Society For Mass Spectrometry. 16: 1009-19. PMID 15914022 DOI: 10.1016/j.jasms.2005.03.029  1
2005 Koeniger SL, Valentine SJ, Myung S, Plasencia M, Lee YJ, Clemmer DE. Development of field modulation in a split-field drift tube for high-throughput multidimensional separations. Journal of Proteome Research. 4: 25-35. PMID 15707354 DOI: 10.1021/pr049877d  1
2004 Liu X, Plasencia M, Ragg S, Valentine SJ, Clemmer DE. Development of high throughput dispersive LC-ion mobility-TOFMS techniques for analysing the human plasma proteome. Briefings in Functional Genomics & Proteomics. 3: 177-86. PMID 15355599 DOI: 10.1093/bfgp/3.2.177  1
2004 Nanita SC, Takats Z, Cooks RG, Myung S, Clemmer DE. Chiral enrichment of serine via formation, dissociation, and soft-landing of octameric cluster ions. Journal of the American Society For Mass Spectrometry. 15: 1360-5. PMID 15337517 DOI: 10.1016/j.jasms.2004.06.010  1
2004 Sowell RA, Koeniger SL, Valentine SJ, Moon MH, Clemmer DE. Nanoflow LC/IMS-MS and LC/IMS-CID/MS of protein mixtures. Journal of the American Society For Mass Spectrometry. 15: 1341-53. PMID 15337515 DOI: 10.1016/j.jasms.2004.06.014  1
2004 Julian RR, Myung S, Clemmer DE. Spontaneous anti-resolution in heterochiral clusters of serine. Journal of the American Chemical Society. 126: 4110-1. PMID 15053592 DOI: 10.1021/ja031516w  1
2004 Myung S, Julian RR, Nanita SC, Cooks RG, Clemmer DE. Formation of nanometer-scale serine clusters by sonic spray Journal of Physical Chemistry B. 108: 6105-6111.  1
2004 Counterman AE, Clemmer DE. Anhydrous Polyproline Helices and Globules Journal of Physical Chemistry B. 108: 4885-4898.  1
2003 Myung S, Lee YJ, Moon MH, Taraszka J, Sowell R, Koeniger S, Hilderbrand AE, Valentine SJ, Cherbas L, Cherbas P, Kaufmann TC, Miller DF, Mechref Y, Novotny MV, Ewing MA, ... ... Clemmer DE, et al. Development of high-sensitivity ion trap ion mobility spectrometry time-of-flight techniques: a high-throughput nano-LC-IMS-TOF separation of peptides arising from a Drosophila protein extract. Analytical Chemistry. 75: 5137-45. PMID 14708788 DOI: 10.1021/ac030107f  1
2003 Moon MH, Myung S, Plasencia M, Hilderbrand AE, Clemmer DE. Nanoflow LC/ion mobility/CID/TOF for proteomics: analysis of a human urinary proteome. Journal of Proteome Research. 2: 589-97. PMID 14692452 DOI: 10.1021/pr034018v  1
2003 Hilderbrand AE, Myung S, Barnes CA, Clemmer DE. Development of LC-IMS-CID-TOFMS techniques: analysis of a 256 component tetrapeptide combinatorial library. Journal of the American Society For Mass Spectrometry. 14: 1424-36. PMID 14652190 DOI: 10.1016/j.jasms.2003.08.002  1
2003 Valentine SJ, Koeniger SL, Clemmer DE. A split-field drift tube for separation and efficient fragmentation of biomolecular ions. Analytical Chemistry. 75: 6202-8. PMID 14616002 DOI: 10.1021/ac030111r  1
2003 Que AH, Mechref Y, Huang Y, Taraszka JA, Clemmer DE, Novotny MV. Coupling capillary electrochromatography with electrospray Fourier transform mass spectrometry for characterizing complex oligosaccharide pools. Analytical Chemistry. 75: 1684-90. PMID 12705603 DOI: 10.1021/ac025985c  1
2003 Srebalus Barnes CA, Clemmer DE. Assessing intrinsic side chain interactions between i and i + 4 residues in solvent-free peptides: A combinatorial gas-phase approach Journal of Physical Chemistry A. 107: 10566-10579. DOI: 10.1021/jp030519s  1
2003 Counterman AE, Clemmer DE. Compact → extended helix transitions of polyalanine in vacuo Journal of Physical Chemistry B. 107: 2111-2117. DOI: 10.1021/jp0213349  1
2003 Counterman AE, Thompson MS, Clemmer DE. Identifying a protein by MALDI-TOF mass spectrometry: An experiment for the undergraduate laboratory Journal of Chemical Education. 80: 177-180.  1
2002 Lee YJ, Hoaglund-Hyzera CS, Srebalus Barnes CA, Hilderbrand AE, Valentine SJ, Clemmer DE. Development of high-throughput liquid chromatography injected ion mobility quadrupole time-of-flight techniques for analysis of complex peptide mixtures. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 782: 343-51. PMID 12458017 DOI: 10.1016/S1570-0232(02)00569-X  1
2002 Badman ER, Myung S, Clemmer DE. Gas-phase separations of protein and peptide ion fragments generated by collision-induced dissociation in an ion trap. Analytical Chemistry. 74: 4889-94. PMID 12380809 DOI: 10.1021/ac020300u  1
2002 Badman ER, Hoaglund-Hyzer CS, Clemmer DE. Dissociation of different conformations of ubiquitin ions. Journal of the American Society For Mass Spectrometry. 13: 719-23. PMID 12056571 DOI: 10.1016/S1044-0305(02)00374-4  1
2002 Counterman AE, Clemmer DE. Cis-trans signatures of proline-containing tryptic peptides in the gas phase. Analytical Chemistry. 74: 1946-51. PMID 12033290 DOI: 10.1021/ac011083k  1
2002 Valentine SJ, Clemmer DE. Temperature-dependent H/D exchange of compact and elongated cytochrome c ions in the gas phase. Journal of the American Society For Mass Spectrometry. 13: 506-17. PMID 12019975 DOI: 10.1016/S1044-0305(02)00372-0  1
2002 Hoaglund-Hyzer CS, Lee YJ, Counterman AE, Clemmer DE. Coupling ion mobility separations, collisional activation techniques, and multiple stages of MS for analysis of complex peptide mixtures. Analytical Chemistry. 74: 992-1006. PMID 11925002 DOI: 10.1021/ac010837s  1
2002 Kindy JM, Taraszka JA, Regnier FE, Clemmer DE. Quantifying peptides in isotopically labeled protease digests by ion mobility/time-of-flight mass spectrometry. Analytical Chemistry. 74: 950-8. PMID 11924997 DOI: 10.1021/ac010807p  1
2002 Mosier PD, Counterman AE, Jurs PC, Clemmer DE. Prediction of peptide ion collision cross sections from topological molecular structure and amino acid parameters. Analytical Chemistry. 74: 1360-70. PMID 11922305 DOI: 10.1021/ac0112059  1
2002 Leavell MD, Gaucher SP, Leary JA, Taraszka JA, Clemmer DE. Conformational studies of Zn-ligand-hexose diastereomers using ion mobility measurements and density functional theory calculations. Journal of the American Society For Mass Spectrometry. 13: 284-93. PMID 11908808 DOI: 10.1016/S1044-0305(01)00362-2  1
2002 Srebalus B, Hilderbrand AE, Valentine SJ, Clemmer DE. Resolving isomeric peptide mixtures: a combined HPLC/ion mobility-TOFMS analysis of a 4000-component combinatorial library. Analytical Chemistry. 74: 26-36. PMID 11795805 DOI: 10.1021/ac0108562  1
2002 Counterman AE, Clemmer DE. Gas phase polyalanine: Assessment of i → i + 3 and i → i + 4 helical turns in [Alan + 4H]4+ (n = 29-49) ion Journal of Physical Chemistry B. 106: 12045-12051. DOI: 10.1021/jp021364b  1
2002 Myung S, Badman ER, Clemmer DE. Structural transitions of electrosprayed ubiquitin ions stored in an ion trap over ∼10 ms to 30 s Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 277-278. DOI: 10.1021/jp0206368  1
2002 Taraszka JA, Sowell RA, Pihakari KA, Mechref Y, Cherbas L, Cherbas P, Novotny MV, Clemmer DE. Quantification of protein regulation in ecdysone-induced Drosophila K c cells using a capillary HPLC/FTMS approach Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 309-310.  1
2002 Lee YJ, Hoaglund-Hyzer CS, Barnes CAS, Hilderbrand AE, Pihakari K, Clemmer DE. Development of LC-Ion mobility-tandem mass spectrometry for high-throughput analysis of complex peptide mixtures Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 867-868.  1
2002 Mechref Y, Que A, Huang Y, Taraszka JA, Clemmer DE, Novotny MV. Analysis of complex O-linked glycans by capillary elecrtrochromatography/ fourier transform mass spectrometry Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 71-72.  1
2002 Sowell RA, Taraszka JA, Pihakari KA, Kindy JM, Clemmer DE. Simplifying protein identification by peptide abundance correlation tagging (PACT) in GIST labeled tryptic digest mixtures: A CapLC-FTMS approach Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 299-300.  1
2002 Pihakari KA, Davidson ER, Clemmer DE. Formation of closed-shell serine clusters Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 809-810.  1
2002 Myung S, Badman ER, Clemmer DE. Structural transitions of electrosprayed ubiquitin ions stored in an ion trap over ∼10 ms to 30 s Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 277-278.  1
2001 Badman ER, Hoaglund-Hyzer CS, Clemmer DE. Monitoring structural changes of proteins in an ion trap over approximately 10-200 ms: unfolding transitions in cytochrome c ions. Analytical Chemistry. 73: 6000-7. PMID 11791572 DOI: 10.1021/ac010744a  1
2001 Lee YJ, Hoaglund-Hyzer CS, Taraszka JA, Zientara GA, Counterman AE, Clemmer DE. Collision-induced dissociation of mobility-separated ions using an orifice-skimmer cone at the back of a drift tube. Analytical Chemistry. 73: 3549-55. PMID 11510817 DOI: 10.1021/ac010295e  1
2001 Shvartsburg AA, Siu KW, Clemmer DE. Prediction of peptide ion mobilities via a priori calculations from intrinsic size parameters of amino acid residues. Journal of the American Society For Mass Spectrometry. 12: 885-8. PMID 11506220 DOI: 10.1016/S1044-0305(01)00269-0  1
2001 Johannessen SC, Brisbois RG, Fischer JP, Grieco PA, Counterman AE, Clemmer DE. A nano-scale barrel and cube: transition metal-mediated self-assembly of CpCoCb-derived ligand scaffolds. Journal of the American Chemical Society. 123: 3818-9. PMID 11457114 DOI: 10.1021/ja004007s  1
2001 Counterman AE, Clemmer DE. Large anhydrous polyalanine ions: evidence for extended helices and onset of a more compact state. Journal of the American Chemical Society. 123: 1490-8. PMID 11456724 DOI: 10.1021/ja9940625  1
2001 Taraszka JA, Counterman AE, Clemmer DE. Gas-phase separations of complex tryptic peptide mixtures. Fresenius' Journal of Analytical Chemistry. 369: 234-45. PMID 11293699  1
2001 Srebalus Barnes CA, Clemmer DE. Assessment of purity and screening of peptide libraries by nested ion mobility-TOFMS: Identification of RNase S-protein binders Analytical Chemistry. 73: 424-433. PMID 11217741 DOI: 10.1021/ac001209y  1
2001 Hoaglund-Hyzer CS, Clemmer DE. Ion trap/ion mobility/quadrupole/time-of-flight mass spectrometry for peptide mixture analysis. Analytical Chemistry. 73: 177-84. PMID 11199963 DOI: 10.1021/ac0007783  1
2001 Counterman AE, Clemmer DE. Magic number clusters of serine in the gas phase Journal of Physical Chemistry B. 105: 8092-8096. DOI: 10.1021/jp011421l  1
2001 Valentine SJ, Kulchania M, Barnes CAS, Clemmer DE. Multidimensional separations of complex peptide mixtures: A combined high-performance liquid chromatography/ion mobility/time-of-flight mass spectrometry approach International Journal of Mass Spectrometry. 212: 97-109. DOI: 10.1016/S1387-3806(01)00511-5  1
2001 Taraszka JA, Counterman AE, Clemmer DE. Large anhydrous polyalanine ions: Substitution of Na+ for H+ destabilizes folded states International Journal of Mass Spectrometry. 204: 87-100. DOI: 10.1016/S1387-3806(00)00336-5  1
2001 Counterman AE, Hilderbrand AE, Srebalus Barnes CA, Clemmer DE. Formation of peptide aggregates during ESI: Size, charge, composition, and contributions to noise Journal of the American Society For Mass Spectrometry. 12: 1020-1035. DOI: 10.1016/S1044-0305(01)00283-5  1
2001 Ideue S, Sakamoto K, Honma K, Clemmer DE. Conformational change of electrosprayed cytochrome c studied by laser-induced fluorescence Chemical Physics Letters. 337: 79-84. DOI: 10.1016/S0009-2614(01)00153-1  1
2000 Hoaglund-Hyzer CS, Li J, Clemmer DE. Mobility labeling for parallel CID of ion mixtures. Analytical Chemistry. 72: 2737-40. PMID 10905301 DOI: 10.1021/ac0000170  1
2000 Srebalus CA, Li J, Marshall WS, Clemmer DE. Determining synthetic failures in combinatorial libraries by hybrid gas-phase separation methods. Journal of the American Society For Mass Spectrometry. 11: 352-5. PMID 10757172  0.92
2000 Taraszka JA, Li J, Clemmer DE. Metal-Mediated Peptide Ion Conformations in the Gas Phase Journal of Physical Chemistry B. 104: 4545-4551.  1
1999 Hoaglund-Hyzer CS, Counterman AE, Clemmer DE. Anhydrous protein ions. Chemical Reviews. 99: 3037-80. PMID 11749510  1
1999 Valentine SJ, Counterman AE, Clemmer DE. A database of 660 peptide ion cross sections: use of intrinsic size parameters for bona fide predictions of cross sections. Journal of the American Society For Mass Spectrometry. 10: 1188-211. PMID 10536822 DOI: 10.1016/S1044-0305(99)00079-3  1
1999 Srebalus CA, Li J, Marshall WS, Clemmer DE. Gas-phase separations of electrosprayed peptide libraries. Analytical Chemistry. 71: 3918-27. PMID 10500479 DOI: 10.1021/ac9903757  1
1999 Henderson SC, Valentine SJ, Counterman AE, Clemmer DE. ESI/ion trap/ion mobility/time-of-flight mass spectrometry for rapid and sensitive analysis of biomolecular mixtures. Analytical Chemistry. 71: 291-301. PMID 9949724 DOI: 10.1021/ac9809175  1
1999 Counterman AE, Clemmer DE. Volumes of individual amino acid residues in gas-phase peptide ions Journal of the American Chemical Society. 121: 4031-4039. DOI: 10.1021/ja984344p  1
1999 Li J, Taraszka JA, Counterman AE, Clemmer DE. Influence of solvent composition and capillary temperature on the conformations of electrosprayed ions: unfolding of compact ubiquitin conformers from pseudonative and denatured solutions International Journal of Mass Spectrometry. 185: 37-47. DOI: 10.1016/S1387-3806(98)14135-0  1
1999 Henderson SC, Li J, Counterman AE, Clemmer DE. Intrinsic Size Parameters for Val, Ile, Leu, Gln, Thr, Phe, and Trp Residues from Ion Mobility Measurements of Polyamino Acid Ions Journal of Physical Chemistry B. 103: 8780-8785.  1
1999 Valentine SJ, Counterman AE, Hoaglund-Hyzer CS, Clemmer DE. Intrinsic amino acid size parameters from a series of 113 lysine-terminated tryptic digest peptide ions Journal of Physical Chemistry B. 103: 1205-1207.  1
1998 Valentine SJ, Counterman AE, Hoaglund CS, Reilly JP, Clemmer DE. Gas-phase separations of protease digests. Journal of the American Society For Mass Spectrometry. 9: 1213-6. PMID 9794086 DOI: 10.1016/S1044-0305(98)00101-9  1
1998 Counterman AE, Valentine SJ, Srebalus CA, Henderson SC, Hoaglund CS, Clemmer DE. High-order structure and dissociation of gaseous peptide aggregates that are hidden in mass spectra. Journal of the American Society For Mass Spectrometry. 9: 743-59. PMID 9692251 DOI: 10.1016/S1044-0305(98)00052-X  1
1998 Hoaglund CS, Valentine SJ, Sporleder CR, Reilly JP, Clemmer DE. Three-dimensional ion mobility/TOFMS analysis of electrosprayed biomolecules. Analytical Chemistry. 70: 2236-42. PMID 9624897  1
1997 Liu Y, Clemmer DE. Characterizing oligosaccharides using injected-ion mobility/mass spectrometry. Analytical Chemistry. 69: 2504-9. PMID 21639386 DOI: 10.1021/ac9701344  1
1997 Hoaglund CS, Liu Y, Ellington AD, Pagel M, Clemmer DE. Gas-phase DNA: Oligothymidine ion conformers Journal of the American Chemical Society. 119: 9051-9052. DOI: 10.1021/ja970652w  1
1997 Valentine SJ, Clemmer DE. H/D exchange levels of shape-resolved cytochrome c conformers in the gas phase Journal of the American Chemical Society. 119: 3558-3566. DOI: 10.1021/ja9626751  1
1997 Shelimov KB, Clemmer DE, Hudgins RR, Jarrold MF. Protein structure in Vacuo: Gas-phase conformations of BPTI and cytochrome c Journal of the American Chemical Society. 119: 2240-2248. DOI: 10.1021/ja9619059  1
1997 Valentine SJ, Counterman AE, Clemmer DE. Conformer-dependent proton-transfer reactions of ubiquitin ions Journal of the American Society For Mass Spectrometry. 8: 954-961. DOI: 10.1016/S1044-0305(97)00085-8  1
1997 Clemmer DE, Jarrold MF. Ion mobility measurements and their applications to clusters and biomolecules Journal of Mass Spectrometry. 32: 577-592. DOI: 10.1002/(SICI)1096-9888(199706)32:6<577::AID-JMS530>3.0.CO;2-4  1
1997 Schröder D, Schwarz H, Clemmer DE, Chen Y, Armentrout PB, Baranov VI, Böhme DK. Activation of hydrogen and methane by thermalized FeO+ in the gas phase as studied by multiple mass spectrometric techniques International Journal of Mass Spectrometry and Ion Processes. 161: 175-191.  1
1997 Liu Y, Valentine SJ, Counterman AE, Hoaglund CS, Clemmer DE. Injected-ion mobility analysis of biomolecules Analytical Chemistry. 69: 728A-735A.  1
1997 Hoaglund CS, Valentine SJ, Clemmer DE. An Ion Trap Interface for ESI-Ion Mobility Experiments Analytical Chemistry. 69: 4156-4161.  1
1997 Valentine SJ, Anderson JG, Ellington AD, Clemmer DE. Disulfide-intact and -reduced lysozyme in the gas phase: Conformations and pathways of folding and unfolding Journal of Physical Chemistry B. 101: 3891-3900.  1
1996 Mawson AR, Biundo JJ, Clemmer DI, Jacobs KW, Ktsanes VK, Rice JC. Sensation-seeking, criminality, and spinal cord injury: a case-control study. American Journal of Epidemiology. 144: 463-72. PMID 8781461  0.32
1996 Shelimov KB, Clemmer DE, Jarrold MF. Metal-containing carbon clusters Journal of the Chemical Society - Dalton Transactions. 567-574.  1
1995 Shelimov KB, Clemmer DE, Jarrold MF. Structures and isomerization of LaCn + clusters Journal of Physical Chemistry. 99: 11376-11386.  1
1995 Clemmer DE, Hudgins RR, Jarrold MF. Naked protein conformations: Cytochrome c in the gas phase Journal of the American Chemical Society. 117: 10141-10142.  1
1995 Clemmer DE, Jarrold MF. Metal-containing carbon clusters: Structures, isomerization, and formation of NbCn + clusters Journal of the American Chemical Society. 117: 8841-8850.  1
1994 Clemmer DE, Hunter JM, Shellmov KB, Jarrold MF. Physical and chemical evidence for metallofullerenes with metal atoms as part of the cage Nature. 372: 248-250. DOI: 10.1038/372248a0  1
1994 Shelimov KB, Clemmer DE, Jarrold MF. Structures and formation of small LaCn + metallofullerenes Journal of Physical Chemistry. 98: 12819-12821.  1
1994 Honma K, Nakamura M, Clemmer DE, Koyano I. Kinetics of Ti(a3F, a5F) and V(a4F, a6D) depletion by NH3 and H2S Journal of Physical Chemistry. 98: 13286-13293.  1
1994 Clemmer DE, Chen YM, Aristov N, Armentrout PB. Kinetic and electronic energy dependence of the reaction of V+ with D2O Journal of Physical Chemistry. 98: 7538-7544.  1
1994 Clemmer DE, Chen YM, Khan FA, Armentrout PB. State-specific reactions of Fe+(a6D,a4F) with D2O and reactions of FeO+ with D2 Journal of Physical Chemistry. 98: 6522-6529.  1
1994 Chen YM, Clemmer DE, Armentrout PB. Kinetic and electronic energy dependence of the reactions of Se+ and Ti+ with D2O Journal of Physical Chemistry. 98: 11490-11498.  1
1994 Chen YM, Clemmer DE, Armentrout PB. Conversion of CH4 to CH3OH: Reactions of CoO+ with CH4 and D2, Co+ with CH3OD and D2O, and Co+(CH3OD) with Xe Journal of the American Chemical Society. 116: 7815-7826.  1
1994 Clemmer DE, Shelimov KB, Jarrold MF. Bonding of metals to carbon rings: LaCn + isomers with La+ inserted and attached to the ring Journal of the American Chemical Society. 116: 5971-5972.  1
1991 Clemmer DI, Mohr DL. Low-back injuries in a heavy industry. II. Labor market forces. Spine. 16: 831-4. PMID 1833830  0.6
1991 Clemmer DI, Mohr DL, Mercer DJ. Low-back injuries in a heavy industry. I. Worker and workplace factors. Spine. 16: 824-30. PMID 1833829  0.32
1989 Mohr DL, Clemmer DI. Evaluation of an occupational injury intervention in the petroleum drilling industry. Accident; Analysis and Prevention. 21: 263-71. PMID 2736023  0.6
1988 Mohr DL, Clemmer DI. The "accident prone" worker: an example from heavy industry. Accident; Analysis and Prevention. 20: 123-7. PMID 3358833  0.6
1987 Mueller BA, Mohr DL, Rice JC, Clemmer DI. Factors affecting individual injury experience among petroleum drilling workers. Journal of Occupational Medicine. : Official Publication of the Industrial Medical Association. 29: 126-31. PMID 3819892  0.6
1985 Morgan VR, Mathison JH, Rice JC, Clemmer DI. Hospital falls: a persistent problem. American Journal of Public Health. 75: 775-7. PMID 4003655  0.32
1985 Clemmer DI, Diem JE. Major mishaps among mobile offshore drilling units, 1955-1981: time trends and fatalities. International Journal of Epidemiology. 14: 106-12. PMID 3988424 DOI: 10.1093/ije/14.1.106  0.32
1980 Clemmer DI, Bertrand WE. A model for the incorporation of alumni-faculty feedback into curriculum planning. American Journal of Public Health. 70: 67-9. PMID 7350825  0.32
1975 Clemmer DI, Serfling RE. The imported fire ant: dimensions of the urban problem. Southern Medical Journal. 68: 1133-8. PMID 1162427  0.32
1966 Clemmer DI, Li F, Le Blanc DR, Fox JP. An outbreak of subclinical infection with Coxsackievirus B3 in southern Louisiana. American Journal of Epidemiology. 83: 123-9. PMID 5910214  0.36
1960 GELFAND HM, LEBLANC DR, POTASH L, CLEMMER DI, FOX JP. The spread of living attenuated strains of polioviruses in two communities in southern Louisiana. American Journal of Public Health and the Nation's Health. 50: 767-78. PMID 13827180  0.36
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