Jitin Singla - Publications

Affiliations: 
University of Southern California, Los Angeles, CA, United States 
Area:
Computational Biology

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Loconte V, Singla J, Li A, Chen JH, Ekman A, McDermott G, Sali A, Gros ML, White KL, Larabell CA. Soft X-ray Tomography for Mapping and Quantifying Intracellular Organelle Interactions. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 29: 1181. PMID 37613466 DOI: 10.1093/micmic/ozad067.607  0.472
2022 Li A, Zhang S, Loconte V, Liu Y, Ekman A, Thompson GJ, Sali A, Stevens RC, White K, Singla J, Sun L. An intensity-based post-processing tool for 3D instance segmentation of organelles in soft X-ray tomograms. Plos One. 17: e0269887. PMID 36048824 DOI: 10.1371/journal.pone.0269887  0.699
2022 Li A, Zhang X, Singla J, White K, Loconte V, Hu C, Zhang C, Li S, Li W, Francis JP, Wang C, Sali A, Sun L, He X, Stevens RC. Auto-segmentation and time-dependent systematic analysis of mesoscale cellular structure in β-cells during insulin secretion. Plos One. 17: e0265567. PMID 35324950 DOI: 10.1371/journal.pone.0265567  0.686
2022 Loconte V, Singla J, Li A, Chen JH, Ekman A, McDermott G, Sali A, Le Gros M, White KL, Larabell CA. Soft X-ray tomography to map and quantify organelle interactions at the mesoscale. Structure (London, England : 1993). PMID 35148829 DOI: 10.1016/j.str.2022.01.006  0.623
2022 Singla J, Burdsall K, Cantrell B, Halsey JR, McDowell A, McGregor C, Mittal S, Stevens RC, Su S, Thomopoulos A, Vaillant T, White KL, Zhang B, Berman HM. A new visual design language for biological structures in a cell. Structure (London, England : 1993). PMID 35093200 DOI: 10.1016/j.str.2022.01.002  0.588
2021 Raveh B, Sun L, White KL, Sanyal T, Tempkin J, Zheng D, Bharath K, Singla J, Wang C, Zhao J, Li A, Graham NA, Kesselman C, Stevens RC, Sali A. Bayesian metamodeling of complex biological systems across varying representations. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34453000 DOI: 10.1073/pnas.2104559118  0.697
2021 Singla J, White KL, Stevens RC, Alber F. Assessment of scoring functions to rank the quality of 3D subtomogram clusters from cryo-electron tomography. Journal of Structural Biology. 107727. PMID 33753204 DOI: 10.1016/j.jsb.2021.107727  0.571
2020 White KL, Singla J, Loconte V, Chen JH, Ekman A, Sun L, Zhang X, Francis JP, Li A, Lin W, Tseng K, McDermott G, Alber F, Sali A, Larabell C, et al. Visualizing subcellular rearrangements in intact β cells using soft x-ray tomography. Science Advances. 6. PMID 33298443 DOI: 10.1126/sciadv.abc8262  0.747
2020 Zhang X, Carter SD, Singla J, White KL, Butler PC, Stevens RC, Jensen GJ. Visualizing insulin vesicle neighborhoods in β cells by cryo-electron tomography. Science Advances. 6. PMID 33298442 DOI: 10.1126/sciadv.abc8258  0.741
2019 Xu M, Singla J, Tocheva EI, Chang YW, Stevens RC, Jensen GJ, Alber F. De Novo Structural Pattern Mining in Cellular Electron Cryotomograms. Structure (London, England : 1993). PMID 30744995 DOI: 10.1016/J.Str.2019.01.005  0.527
2019 WHITE KL, SINGLA J, STEVENS RC. 335-LB: Towards Generating Spatiotemporal Multiscale Models of Pancreatic ß Cells Diabetes. 68: 335-LB. DOI: 10.2337/Db19-335-Lb  0.752
2019 White KL, Singla J, Francis J, Chen J, Ekman A, Larabell C, Stevens RC. Mesoscale Architecture of Beta Cells Upon Glucose and Ex-4 Stimulation Biophysical Journal. 116: 431a. DOI: 10.1016/J.Bpj.2018.11.2322  0.636
2018 Singla J, McClary KM, White KL, Alber F, Sali A, Stevens RC. Opportunities and Challenges in Building a Spatiotemporal Multi-scale Model of the Human Pancreatic β Cell. Cell. 173: 11-19. PMID 29570991 DOI: 10.1016/J.Cell.2018.03.014  0.704
2018 WHITE KL, MCCLARY K, SINGLA J, STEVENS RC. Towards Generating Spatiotemporal Multiscale Models of Human Pancreatic Beta Cells Diabetes. 67: 2171-P. DOI: 10.2337/Db18-2171-P  0.717
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