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Shama Parveen Mirza, Ph.D. - Publications

Affiliations: 
2017- Chemistry & Biochemistry University of Wisconsin-Milwaukee, Milwaukee, WI 
Area:
Analytical Chemistry
Website:
http://uwm.edu/chemistry/people/mirza-shama/
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21/55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Rajaratnam V, Islam MM, Kub EF, Rajaratnam S, Kim KB, Rahman MT, Rashid F, Benko AM, Cook JM, Arnold LA, Mirza SP. Development and validation of an LC-MS/MS method for the determination of ARN14988, an acid ceramidase inhibitor, and its application to a pharmacokinetic study in a mouse model. Biomedical Chromatography : Bmc. e5754. PMID 37750452 DOI: 10.1002/bmc.5754  0.557
2022 Islam MM, Kub EF, Rajaratnam V, Mirza SP. The development and validation of sensitive LC-MS/MS method for quantitative bioanalysis of carmofur in mouse plasma and its application to pharmacokinetic study. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 1212: 123516. PMID 36332509 DOI: 10.1016/j.jchromb.2022.123516  0.569
2022 Islam MM, Mirza SP. Versatile use of Carmofur: A comprehensive review of its chemistry and pharmacology. Drug Development Research. PMID 36031762 DOI: 10.1002/ddr.21984  0.475
2020 Rajaratnam V, Islam MM, Yang M, Slaby R, Ramirez HM, Mirza SP. Glioblastoma: Pathogenesis and Current Status of Chemotherapy and Other Novel Treatments. Cancers. 12. PMID 32290213 DOI: 10.3390/cancers12040937  0.47
2014 Heroux MS, Chesnik MA, Halligan BD, Al-Gizawiy M, Connelly JM, Mueller WM, Rand SD, Cochran EJ, LaViolette PS, Malkin MG, Schmainda KM, Mirza SP. Comprehensive characterization of glioblastoma tumor tissues for biomarker identification using mass spectrometry-based label-free quantitative proteomics. Physiological Genomics. 46: 467-81. PMID 24803679 DOI: 10.1152/Physiolgenomics.00034.2014  0.381
2012 Mirza SP. Quantitative mass spectrometry-based approaches in cardiovascular research Circulation. Cardiovascular Genetics. 5: 477. PMID 22896015 DOI: 10.1161/Circgenetics.110.957753  0.373
2011 Chesnik M, Halligan B, Olivier M, Mirza SP. Sequential abundant ion fragmentation analysis (SAIFA): an alternative approach for phosphopeptide identification using an ion trap mass spectrometer. Analytical Biochemistry. 418: 197-203. PMID 21855524 DOI: 10.1016/J.Ab.2011.07.026  0.38
2010 Collins LA, Mirza SP, Kissebah AH, Olivier M. Integrated approach for the comprehensive characterization of lipoproteins from human plasma using FPLC and nano-HPLC-tandem mass spectrometry. Physiological Genomics. 40: 208-15. PMID 19903763 DOI: 10.1152/Physiolgenomics.00136.2009  0.302
2008 Mirza SP, Olivier M. Methods and approaches for the comprehensive characterization and quantification of cellular proteomes using mass spectrometry. Physiological Genomics. 33: 3-11. PMID 18162499 DOI: 10.1152/Physiolgenomics.00292.2007  0.352
2006 Kim SC, Chen Y, Mirza S, Xu Y, Lee J, Liu P, Zhao Y. A clean, more efficient method for in-solution digestion of protein mixtures without detergent or urea. Journal of Proteome Research. 5: 3446-52. PMID 17137347 DOI: 10.1021/Pr0603396  0.553
2006 Pellitteri-Hahn MC, Warren MC, Didier DN, Winkler EL, Mirza SP, Greene AS, Olivier M. Improved mass spectrometric proteomic profiling of the secretome of rat vascular endothelial cells. Journal of Proteome Research. 5: 2861-4. PMID 17022658 DOI: 10.1021/Pr060287K  0.316
2004 Prabhakar S, Radha Kishan M, Mirza SP, Raghavan KV, Vairamani M. Mass spectral study of meso-alkyl and meso-cycloalkyl calix(4)pyrroles under electron impact conditions. Rapid Communications in Mass Spectrometry : Rcm. 18: 2077-86. PMID 15378721 DOI: 10.1002/Rcm.1594  0.564
2004 Premsingh S, Venkataramanan NS, Rajagopal S, Mirza SP, Vairamani M, Rao PS, Velavan K. Electron transfer reaction of oxo(salen)chromium(V) ion with anilines. Inorganic Chemistry. 43: 5744-53. PMID 15332827 DOI: 10.1021/Ic049482W  0.527
2004 Mirza SP, Raju NP, Vairamani M. Estimation of the proton affinity values of fifteen matrix-assisted laser desorption/ionization matrices under electrospray ionization conditions using the kinetic method. Journal of the American Society For Mass Spectrometry. 15: 431-5. PMID 14998547 DOI: 10.1016/J.Jasms.2003.12.001  0.58
2004 Mirza SP, Raju NP, Madhavendra SS, Vairamani M. 5-Amino-2-mercapto-1,3,4-thiadiazole: a new matrix for the efficient matrix-assisted laser desorption/ionization of neutral carbohydrates Rapid Communications in Mass Spectrometry. 18: 1666-1674. DOI: 10.1002/Rcm.1536  0.524
2003 Reddy TJ, Mirza SP, Saradhi UV, Rao VJ, Vairamani M. Mass spectral studies of N,N-dialkylaminoethanols. Rapid Communications in Mass Spectrometry : Rcm. 17: 746-52. PMID 12661030 DOI: 10.1002/Rcm.962  0.587
2003 Mirza S, Krishna P, Prabhakar S, Vairamani M, Giblin D, Gross ML. The kinetic method reveals secondary deuterium isotope effects on the proton affinity and gas-phase basicity of glycine and alanine methyl esters International Journal of Mass Spectrometry. 230: 175-183. DOI: 10.1016/J.Ijms.2003.08.009  0.516
2001 Raju NP, Mirza SP, Vairamani M, Ramulu AR, Pardhasaradhi M. 5-Ethyl-2-mercaptothiazole as matrix for matrix-assisted laser desorption/ionization of a broad spectrum of analytes in positive and negative ion mode. Rapid Communications in Mass Spectrometry : Rcm. 15: 1879-84. PMID 11565107 DOI: 10.1002/Rcm.392  0.578
2001 Mirza SP, Prabhakar S, Vairamani M. Estimation of proton affinity of proline and tryptophan under electrospray ionization conditions using the extended kinetic method. Rapid Communications in Mass Spectrometry : Rcm. 15: 957-62. PMID 11400203 DOI: 10.1002/Rcm.319  0.535
2001 Prabhakar S, Kar P, Mirza SP, Lakshmi VVS, Nagaiah K, Vairamani M. Mass spectral study of O- and s-aryl dimethylthiocarbamates under electron impact conditions: Newman-kwart rearrangement in the gas phase† Rapid Communications in Mass Spectrometry. 15: 2127-2134. DOI: 10.1002/Rcm.490  0.56
2000 Prabhakar S, Mirza SP, Kundu A, Roy S, Vairamani M. Claisen rearrangement of allyl phenyl ether and its sulfur and selenium analogues on electron impact Rapid Communications in Mass Spectrometry : Rcm. 14: 1116-22. PMID 10867686 DOI: 10.1002/1097-0231(20000715)14:13<1116::Aid-Rcm997>3.0.Co;2-W  0.582
Low-probability matches (unlikely to be authored by this person)
2008 Mirza SP, Greene AS, Olivier M. 18O labeling over a coffee break: a rapid strategy for quantitative proteomics. Journal of Proteome Research. 7: 3042-8. PMID 18510357 DOI: 10.1021/Pr800018G  0.299
2007 Mirza SP, Halligan BD, Greene AS, Olivier M. Improved method for the analysis of membrane proteins by mass spectrometry. Physiological Genomics. 30: 89-94. PMID 17341690 DOI: 10.1152/Physiolgenomics.00279.2006  0.293
2017 Doan NB, Alhajala H, Al-Gizawiy MM, Mueller WM, Rand SD, Connelly JM, Cochran EJ, Chitambar CR, Clark P, Kuo J, Schmainda KM, Mirza SP. Acid ceramidase and its inhibitors: a de novo drug target and a new class of drugs for killing glioblastoma cancer stem cells with high efficiency. Oncotarget. 8: 112662-112674. PMID 29348854 DOI: 10.18632/Oncotarget.22637  0.291
2008 Lee JE, Mirza SP, Didier DN, Scalf M, Olivier M, Greene AS, Smith LM. Identification of cell surface markers to differentiate rat endothelial and fibroblast cells using lectin arrays and LC-ESI-MS/MS. Analytical Chemistry. 80: 8269-75. PMID 18821777 DOI: 10.1021/Ac801390B  0.278
2011 Narayan M, Mirza SP, Twining SS. Identification of phosphorylation sites on extracellular corneal epithelial cell maspin. Proteomics. 11: 1382-90. PMID 21365746 DOI: 10.1002/Pmic.201000362  0.278
2015 Renu D, Aggarwal P, Cherukuri S, Tata P, Bhat V, Livi C, Rosenberg M, Al-Gizawiy M, Mueller W, Connelly J, Schmainda K, Mirza S. GENO-02INTEGRATED ANALYSIS OF MOLECULAR SUBTYPES IN GLIOBLASTOMA MULTIFORME Neuro-Oncology. 17: v91.2-v91. DOI: 10.1093/Neuonc/Nov215.02  0.275
2017 Doan NB, Nguyen HS, Al-Gizawiy MM, Mueller WM, Sabbadini RA, Rand SD, Connelly JM, Chitambar CR, Schmainda KM, Mirza SP. Acid ceramidase confers radioresistance to glioblastoma cells. Oncology Reports. PMID 28765947 DOI: 10.3892/Or.2017.5855  0.274
2017 Al-Gizawiy MM, Doan NB, Wujek RT, Alhajala HS, Mirza SP, Chitambar CR, Schmainda KM. TMOD-09. A PATIENT-DERIVED XENOGRAFT MODEL MIMICKING RECURRENT PEDIATRIC MALIGNANT GLIOMA Neuro-Oncology. 19: iv50-iv50. DOI: 10.1093/Neuonc/Nox083.208  0.264
2016 Doan NB, Al-Gizawiy MM, Nguyen HS, Schmainda KM, Mueller WM, Mirza SP. CBIO-09. ACID CERAMIDASE CONFERS RADIORESISTANCE TO GLIOBLASTOMA CELLS Neuro-Oncology. 18: vi37-vi37. DOI: 10.1093/Neuonc/Now212.147  0.264
2017 Doan NB, Nguyen HS, Montoure A, Al-Gizawiy MM, Mueller WM, Kurpad S, Rand SD, Connelly JM, Chitambar CR, Schmainda KM, Mirza SP. Acid ceramidase is a novel drug target for pediatric brain tumors. Oncotarget. 8: 24753-24761. PMID 28445970 DOI: 10.18632/Oncotarget.15800  0.263
2011 Wu CH, Chen S, Shortreed MR, Kreitinger GM, Yuan Y, Frey BL, Zhang Y, Mirza S, Cirillo LA, Olivier M, Smith LM. Sequence-specific capture of protein-DNA complexes for mass spectrometric protein identification. Plos One. 6: e26217. PMID 22028835 DOI: 10.1371/Journal.Pone.0026217  0.262
2013 Bigley TM, Reitsma JM, Mirza SP, Terhune SS. Human cytomegalovirus pUL97 regulates the viral major immediate early promoter by phosphorylation-mediated disruption of histone deacetylase 1 binding. Journal of Virology. 87: 7393-408. PMID 23616659 DOI: 10.1128/Jvi.02825-12  0.233
2014 Alexanian A, Miller B, Chesnik M, Mirza S, Sorokin A. Post-translational regulation of COX2 activity by FYN in prostate cancer cells. Oncotarget. 5: 4232-43. PMID 24970799 DOI: 10.18632/Oncotarget.1983  0.229
2017 Al-Gizawiy MM, Wujek RT, Alhajala HS, Doan NB, Knipstein J, Connelly JM, Mirza SP, Chitambar CR, Schmainda KM. TMOD-08. IN VITRO PRE-TREATMENT OF CELL LINES PRODUCES A ROBUST IN VIVO XENOGRAFT MODEL MIMICKING RECURRENT GLIOBLASTOMA Neuro-Oncology. 19: vi256-vi256. DOI: 10.1093/Neuonc/Nox168.1047  0.228
2012 Mesrobian HG, Mirza SP. Hydronephrosis: a view from the inside. Pediatric Clinics of North America. 59: 839-51. PMID 22857832 DOI: 10.1016/J.Pcl.2012.05.008  0.225
2012 Hou S, Suresh PS, Qi X, Lepp A, Mirza SP, Chen G. p38γ Mitogen-activated protein kinase signals through phosphorylating its phosphatase PTPH1 in regulating ras protein oncogenesis and stress response. The Journal of Biological Chemistry. 287: 27895-905. PMID 22730326 DOI: 10.1074/Jbc.M111.335794  0.224
2013 Mesrobian HG, Kryger JV, Groth TW, Fiscus GE, Mirza SP. Urinary proteome analysis in patients with stable SFU grade 4 ureteropelvic junction obstruction differs from normal. Urology. 82: 745.e1-10. PMID 23987180 DOI: 10.1016/J.Urology.2013.06.009  0.223
2011 Mesrobian H, Mitchell M, Groth T, See W, Halligan B, Mirza S, Wakim B. 455 ANALYSIS OF THE WHOLE URINARY PROTEOME OF STABLE INFANTS WITH GRADE 4 URETEROPELVIC JUNCTION OBSTRUCTION: A FORGOTTEN MAJORITY Journal of Urology. 185. DOI: 10.1016/J.Juro.2011.02.547  0.214
2014 Qi X, Xie C, Hou S, Li G, Yin N, Dong L, Lepp A, Chesnik MA, Mirza SP, Szabo A, Tsai S, Basir Z, Wu S, Chen G. Identification of a ternary protein-complex as a therapeutic target for K-Ras-dependent colon cancer. Oncotarget. 5: 4269-82. PMID 24962213 DOI: 10.18632/Oncotarget.2001  0.213
2016 Raphael R, Purushotham D, Gastonguay C, Chesnik MA, Kwok WM, Wu HE, Shah SJ, Mirza SP, Strande JL. Combining patient proteomics and in vitro cardiomyocyte phenotype testing to identify potential mediators of heart failure with preserved ejection fraction. Journal of Translational Medicine. 14: 18. PMID 26792056 DOI: 10.1186/S12967-016-0774-3  0.213
2016 Al-Gizawiy MM, Doan NB, Schmainda KM, Mueller WM, Connelly JM, Mirza SP. MPTH-19. GLIOMA CHARACTERIZATION USING THE NOVEL BIOMARKER ACID CERAMIDASE Neuro-Oncology. 18: vi109-vi110. DOI: 10.1093/Neuonc/Now212.457  0.137
2018 Doan NB, Nguyen HS, Alhajala HS, Jaber B, Al-Gizawiy MM, Ahn EE, Mueller WM, Chitambar CR, Mirza SP, Schmainda KM. Identification of radiation responsive genes and transcriptome profiling via complete RNA sequencing in a stable radioresistant U87 glioblastoma model. Oncotarget. 9: 23532-23542. PMID 29805753 DOI: 10.18632/Oncotarget.25247  0.133
2018 Yacout SM, McIlwain KL, Mirza SP, Gaillard ER. Characterization of RPE Melanin and Degraded Synthetic Melanin Using Mass Spectrometry and In Vitro Biochemical Diagnostics. Photochemistry and Photobiology. PMID 29752877 DOI: 10.1111/Php.12934  0.129
2018 Alhajala HS, Nguyen HS, Shabani S, Best B, Kaushal M, Al-Gizawiy MM, Erin Ahn EY, Knipstein JA, Mirza S, Schmainda KM, Chitambar CR, Doan NB. Irradiation of pediatric glioblastoma cells promotes radioresistance and enhances glioma malignancy genome-wide transcriptome changes. Oncotarget. 9: 34122-34131. PMID 30344926 DOI: 10.18632/Oncotarget.26137  0.127
2016 Al-Gizawiy MM, Doan NB, Schmainda KM, Palomares JA, Mueller WM, Connelly JM, Mirza SP. MPTH-28. ACID CERAMIDASE IS A SUPPLEMENTARY BIOMARKER OF SURVIVAL IN GLIOMA Neuro-Oncology. 18: vi112-vi112. DOI: 10.1093/Neuonc/Now212.466  0.108
2021 Uyar DS, Huang YW, Chesnik MA, Doan NB, Mirza SP. Comprehensive serum proteomic analysis in early endometrial cancer. Journal of Proteomics. 104099. PMID 33412313 DOI: 10.1016/j.jprot.2020.104099  0.098
2019 Zhang Q, Lee SB, Chen X, Stevenson M, Pan J, Xiong D, Zhou Y, Miller M, Lubet RA, Wang Y, Mirza S, You M. Optimized bexarotene aerosol formulation inhibits major subtypes of lung cancer in mice. Nano Letters. PMID 30873838 DOI: 10.1021/Acs.Nanolett.8B04309  0.088
2020 Stetson LC, Ostrom QT, Schlatzer D, Liao P, Devine K, Waite K, Couce ME, Harris PLR, Kerstetter-Fogle A, Berens ME, Sloan AE, Islam MM, Rajaratnam V, Mirza SP, Chance MR, et al. Proteins inform survival-based differences in patients with glioblastoma. Neuro-Oncology Advances. 2: vdaa039. PMID 32642694 DOI: 10.1093/noajnl/vdaa039  0.085
2018 Al-Gizawiy M, Robert W, Alhajala H, Cobb J, Prah M, Mirza S, Chitambar C, Schmainda K. EXTH-48. ORAL GALLIUM MALTOLATE IMPAIRS TUMOR GROWTH AND EXTENDS DISEASE-SPECIFIC SURVIVAL IN A XENOGRAFT MODEL OF RECURRENT GBM Neuro-Oncology. 20: vi95-vi95. DOI: 10.1093/Neuonc/Noy148.396  0.076
2019 Labbe BD, Hall CL, Kellogg SL, Chen Y, Koehn O, Pickrum AM, Mirza SP, Kristich CJ. Reciprocal regulation of PASTA kinase signaling by differential modification. Journal of Bacteriology. PMID 30858297 DOI: 10.1128/Jb.00016-19  0.075
2019 Ciezki K, Wesener S, Jaber D, Mirza S, Forst S. ngrA-dependent natural products are required for interspecies competition and virulence in the insect pathogenic bacterium Xenorhabdus szentirmaii. Microbiology (Reading, England). 165: 538-553. PMID 30938671 DOI: 10.1099/Mic.0.000793  0.062
2019 Al-Gizawiy M, Wujek R, Prah M, Knipstein J, Alhajala H, Doan N, Molino S, Mirza S, Chitambar C, Schmainda K. THER-12. NOVEL IRON-TARGETED THERAPY IS HIGHLY EFFECTIVE IN TREATMENT-RESISTANT HIGH-GRADE GLIOMA IN VIVO Neuro-Oncology. 21: ii116-ii116. DOI: 10.1093/Neuonc/Noz036.219  0.058
2007 Halligan BD, Mirza SP, Pellitteri-Hahn MC, Olivier M, Greene AS. Visualizing quantitative proteomics datasets using treemaps Proceedings of the International Conference On Information Visualisation. 527-534. DOI: 10.1109/IV.2007.136  0.053
2016 Cossette SM, Bhute VJ, Bao X, Harmann LM, Horswill MA, Sinha I, Gastonguay A, Pooya S, Bordas M, Kumar SN, Mirza SP, Palecek S, Strande J, Ramchandran R. Sucrose Non-Fermenting Related Kinase Enzyme Mediated Rho-Associated Kinase Signaling is Responsible for Cardiac Function. Circulation. Cardiovascular Genetics. PMID 27780848 DOI: 10.1161/Circgenetics.116.001515  0.037
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