mark viant, Ph.D. - Publications

Affiliations: 
Chemistry University of Southampton, Southampton, England, United Kingdom 

147 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Di Guida R, Engel J, Allwood JW, Weber RJ, Jones MR, Sommer U, Viant MR, Dunn WB. Non-targeted UHPLC-MS metabolomic data processing methods: a comparative investigation of normalisation, missing value imputation, transformation and scaling. Metabolomics : Official Journal of the Metabolomic Society. 12: 93. PMID 27123000 DOI: 10.1007/s11306-016-1030-9  0.68
2016 Molloy JC, Sommer U, Viant MR, Sinkins SP. Wolbachia modulates lipid metabolism in Aedes albopictus mosquito cells. Applied and Environmental Microbiology. PMID 26994075 DOI: 10.1128/AEM.00275-16  0.68
2016 Edison AS, Hall RD, Junot C, Karp PD, Kurland IJ, Mistrik R, Reed LK, Saito K, Salek RM, Steinbeck C, Sumner LW, Viant MR. The Time Is Right to Focus on Model Organism Metabolomes. Metabolites. 6. PMID 26891337 DOI: 10.3390/metabo6010008  0.68
2016 Taylor NS, Kirwan JA, Johnson C, Yan ND, Viant MR, Gunn JM, McGeer JC. Predicting chronic copper and nickel reproductive toxicity to Daphnia pulex-pulicaria from whole-animal metabolic profiles. Environmental Pollution (Barking, Essex : 1987). 212: 325-329. PMID 26854702 DOI: 10.1016/j.envpol.2016.01.074  0.68
2016 Hao J, Liebeke M, Sommer U, Viant MR, Bundy JG, Ebbels TM. Statistical correlations between NMR spectroscopy and direct infusion FT-ICR mass spectrometry aid annotation of unknowns in metabolomics. Analytical Chemistry. PMID 26824414 DOI: 10.1021/acs.analchem.5b02889  0.68
2016 Rocca-Serra P, Salek RM, Arita M, Correa E, Dayalan S, Gonzalez-Beltran A, Ebbels T, Goodacre R, Hastings J, Haug K, Koulman A, Nikolski M, Oresic M, Sansone SA, Schober D, ... ... Viant MR, et al. Data standards can boost metabolomics research, and if there is a will, there is a way. Metabolomics : Official Journal of the Metabolomic Society. 12: 14. PMID 26612985 DOI: 10.1007/s11306-015-0879-3  0.68
2016 Søfteland L, Berntssen MHG, Kirwan JA, Størseth TR, Viant MR, Torstensen BE, Waagbø R, Olsvik PA. Omega-3 and alpha-tocopherol provide more protection against contaminants in novel feeds for Atlantic salmon (Salmo salar L.) than omega-6 and gamma tocopherol Toxicology Reports. 3: 211-224. DOI: 10.1016/j.toxrep.2016.01.008  0.68
2015 Zhang J, Abou-Elwafa Abdallah M, Williams TD, Harrad S, Chipman JK, Viant MR. Gene expression and metabolic responses of HepG2/C3A cells exposed to flame retardants and dust extracts at concentrations relevant to indoor environmental exposures. Chemosphere. 144: 1996-2003. PMID 26551197 DOI: 10.1016/j.chemosphere.2015.10.014  0.68
2015 Cole WT, Fellers RS, Viant MR, Leforestier C, Saykally RJ. Far-infrared VRT spectroscopy of the water dimer: Characterization of the 20 μm out-of-plane librational vibration. The Journal of Chemical Physics. 143: 154306. PMID 26493906 DOI: 10.1063/1.4933116  0.68
2015 Mayor DJ, Sommer U, Cook KB, Viant MR. The metabolic response of marine copepods to environmental warming and ocean acidification in the absence of food. Scientific Reports. 5: 13690. PMID 26364855 DOI: 10.1038/srep13690  0.68
2015 Zhang J, Williams TD, Abdallah MA, Harrad S, Chipman JK, Viant MR. Transcriptomic and metabolomic approaches to investigate the molecular responses of human cell lines exposed to the flame retardant hexabromocyclododecane (HBCD). Toxicology in Vitro : An International Journal Published in Association With Bibra. PMID 26320833 DOI: 10.1016/j.tiv.2015.08.017  0.68
2015 Antczak P, White TA, Giri A, Michelangeli F, Viant MR, Cronin MT, Vulpe C, Falciani F. Systems Biology Approach Reveals a Calcium-Dependent Mechanism for Basal Toxicity in Daphnia magna. Environmental Science & Technology. 49: 11132-40. PMID 26244374 DOI: 10.1021/acs.est.5b02707  0.68
2015 Zhang J, Williams TD, Chipman JK, Viant MR. Defensive and adverse energy-related molecular responses precede tris (1, 3-dichloro-2-propyl) phosphate cytotoxicity. Journal of Applied Toxicology : Jat. PMID 26179874 DOI: 10.1002/jat.3194  0.68
2015 Weber RJ, Winder CL, Larcombe LD, Dunn WB, Viant MR. Training needs in metabolomics. Metabolomics : Official Journal of the Metabolomic Society. 11: 784-786. PMID 26109924 DOI: 10.1007/s11306-015-0815-6  0.68
2015 Southam AD, Khanim FL, Hayden RE, Constantinou JK, Koczula KM, Michell RH, Viant MR, Drayson MT, Bunce CM. Drug Redeployment to Kill Leukemia and Lymphoma Cells by Disrupting SCD1-Mediated Synthesis of Monounsaturated Fatty Acids. Cancer Research. 75: 2530-40. PMID 25943877 DOI: 10.1158/0008-5472.CAN-15-0202  0.68
2015 Taylor NS, Merrifield R, Williams TD, Chipman JK, Lead JR, Viant MR. Molecular toxicity of cerium oxide nanoparticles to the freshwater alga Chlamydomonas reinhardtii is associated with supra-environmental exposure concentrations. Nanotoxicology. 1-10. PMID 25740379 DOI: 10.3109/17435390.2014.1002868  0.68
2015 Abdallah MA, Zhang J, Pawar G, Viant MR, Chipman JK, D'Silva K, Bromirski M, Harrad S. High-resolution mass spectrometry provides novel insights into products of human metabolism of organophosphate and brominated flame retardants. Analytical and Bioanalytical Chemistry. 407: 1871-83. PMID 25600687 DOI: 10.1007/s00216-015-8466-z  0.68
2015 Bradbury J, Genta-Jouve G, Allwood JW, Dunn WB, Goodacre R, Knowles JD, He S, Viant MR. MUSCLE: automated multi-objective evolutionary optimization of targeted LC-MS/MS analysis. Bioinformatics (Oxford, England). 31: 975-7. PMID 25388146 DOI: 10.1093/bioinformatics/btu740  0.68
2015 Drury NE, Howell NJ, Calvert MJ, Weber RJ, Senanayake EL, Lewis ME, Hyde JA, Green DH, Mascaro JG, Wilson IC, Graham TR, Rooney SJ, Viant MR, Freemantle N, Frenneaux MP, et al. The effect of perhexiline on myocardial protection during coronary artery surgery: a two-centre, randomized, double-blind, placebo-controlled trial. European Journal of Cardio-Thoracic Surgery : Official Journal of the European Association For Cardio-Thoracic Surgery. 47: 464-72. PMID 24948413 DOI: 10.1093/ejcts/ezu238  0.68
2015 Llewellyn CA, Sommer U, Dupont CL, Allen AE, Viant MR. Using community metabolomics as a new approach to discriminate marine microbial particulate organic matter in the western English Channel Progress in Oceanography. DOI: 10.1016/j.pocean.2015.04.022  0.68
2015 He S, Chen H, Zhu Z, Ward DG, Cooper HJ, Viant MR, Heath JK, Yao X. Robust twin boosting for feature selection from high-dimensional omics data with label noise Information Sciences. 291: 1-18. DOI: 10.1016/j.ins.2014.08.048  0.68
2015 Salek RM, Arita M, Dayalan S, Ebbels T, Jones AR, Neumann S, Rocca-Serra P, Viant MR, Vizcaíno JA. Embedding standards in metabolomics: the Metabolomics Society data standards task group Metabolomics. 11: 782-783. DOI: 10.1007/s11306-015-0821-8  0.68
2015 Salek RM, Neumann S, Schober D, Hummel J, Billiau K, Kopka J, Correa E, Reijmers T, Rosato A, Tenori L, Turano P, Marin S, Deborde C, Jacob D, Rolin D, ... ... Viant MR, et al. COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access Metabolomics. DOI: 10.1007/s11306-015-0810-y  0.68
2014 Southam AD, Lange A, Al-Salhi R, Hill EM, Tyler CR, Viant MR. Distinguishing between the metabolome and xenobiotic exposome in environmental field samples analysed by direct-infusion mass spectrometry based metabolomics and lipidomics. Metabolomics : Official Journal of the Metabolomic Society. 10: 1050-1058. PMID 25374485 DOI: 10.1007/s11306-014-0693-3  0.68
2014 Søfteland L, Kirwan JA, Hori TS, Størseth TR, Sommer U, Berntssen MH, Viant MR, Rise ML, Waagbø R, Torstensen BE, Booman M, Olsvik PA. Toxicological effect of single contaminants and contaminant mixtures associated with plant ingredients in novel salmon feeds. Food and Chemical Toxicology : An International Journal Published For the British Industrial Biological Research Association. 73: 157-74. PMID 25193261 DOI: 10.1016/j.fct.2014.08.008  0.68
2014 Poulson-Ellestad KL, Jones CM, Roy J, Viant MR, Fernández FM, Kubanek J, Nunn BL. Metabolomics and proteomics reveal impacts of chemically mediated competition on marine plankton. Proceedings of the National Academy of Sciences of the United States of America. 111: 9009-14. PMID 24889616 DOI: 10.1073/pnas.1402130111  0.68
2014 Ellis RP, Spicer JI, Byrne JJ, Sommer U, Viant MR, White DA, Widdicombe S. (1)H NMR metabolomics reveals contrasting response by male and female mussels exposed to reduced seawater pH, increased temperature, and a pathogen. Environmental Science & Technology. 48: 7044-52. PMID 24846475 DOI: 10.1021/es501601w  0.68
2014 Romano S, Dittmar T, Bondarev V, Weber RJ, Viant MR, Schulz-Vogt HN. Exo-metabolome of Pseudovibrio sp. FO-BEG1 analyzed by ultra-high resolution mass spectrometry and the effect of phosphate limitation. Plos One. 9: e96038. PMID 24787987 DOI: 10.1371/journal.pone.0096038  0.68
2014 Williams TD, Davies IM, Wu H, Diab AM, Webster L, Viant MR, Chipman JK, Leaver MJ, George SG, Moffat CF, Robinson CD. Molecular responses of European flounder (Platichthys flesus) chronically exposed to contaminated estuarine sediments. Chemosphere. 108: 152-8. PMID 24534155 DOI: 10.1016/j.chemosphere.2014.01.028  0.68
2014 Zhou J, Weber RJ, Allwood JW, Mistrik R, Zhu Z, Ji Z, Chen S, Dunn WB, He S, Viant MR. HAMMER: automated operation of mass frontier to construct in silico mass spectral fragmentation libraries. Bioinformatics (Oxford, England). 30: 581-3. PMID 24336413 DOI: 10.1093/bioinformatics/btt711  0.68
2014 Poulson-Ellestad KL, Jones CM, Roy J, Viant MR, Fernández FM, Kubanek J, Nunn BL. Metabolomics and proteomics reveal impacts of chemically mediated competition on marine plankton (Proceedings of the National Academy of Sciences of the United States of America (2014) 111, 24 (9000-9014) DOI: 10.1073/pnas.1402130111) Proceedings of the National Academy of Sciences of the United States of America. 111: 12568. DOI: 10.1073/pnas.1413432111  0.68
2014 Viant MR. The year in review: highlights of the Metabolomics Society in 2014 Metabolomics. 10: 1043-1044. DOI: 10.1007/s11306-014-0737-8  0.68
2013 Weber RJ, Selander E, Sommer U, Viant MR. A stable-isotope mass spectrometry-based metabolic footprinting approach to analyze exudates from phytoplankton. Marine Drugs. 11: 4158-75. PMID 24172212 DOI: 10.3390/md11114158  0.68
2013 Römer I, Gavin AJ, White TA, Merrifield RC, Chipman JK, Viant MR, Lead JR. The critical importance of defined media conditions in Daphnia magna nanotoxicity studies. Toxicology Letters. 223: 103-8. PMID 24021169 DOI: 10.1016/j.toxlet.2013.08.026  0.68
2013 Young SP, Kapoor SR, Viant MR, Byrne JJ, Filer A, Buckley CD, Kitas GD, Raza K. The impact of inflammation on metabolomic profiles in patients with arthritis. Arthritis and Rheumatism. 65: 2015-23. PMID 23740368 DOI: 10.1002/art.38021  0.68
2013 Mirbahai L, Southam AD, Sommer U, Williams TD, Bignell JP, Lyons BP, Viant MR, Chipman JK. Disruption of DNA methylation via S-adenosylhomocysteine is a key process in high incidence liver carcinogenesis in fish. Journal of Proteome Research. 12: 2895-904. PMID 23611792 DOI: 10.1021/pr400195u  0.68
2013 Verberk WC, Sommer U, Davidson RL, Viant MR. Anaerobic metabolism at thermal extremes: a metabolomic test of the oxygen limitation hypothesis in an aquatic insect. Integrative and Comparative Biology. 53: 609-19. PMID 23604617 DOI: 10.1093/icb/ict015  0.68
2013 Kirwan JA, Broadhurst DI, Davidson RL, Viant MR. Characterising and correcting batch variation in an automated direct infusion mass spectrometry (DIMS) metabolomics workflow. Analytical and Bioanalytical Chemistry. 405: 5147-57. PMID 23455646 DOI: 10.1007/s00216-013-6856-7  0.68
2013 Lodi A, Tiziani S, Khanim FL, Günther UL, Viant MR, Morgan GJ, Bunce CM, Drayson MT. Proton NMR-based metabolite analyses of archived serial paired serum and urine samples from myeloma patients at different stages of disease activity identifies acetylcarnitine as a novel marker of active disease. Plos One. 8: e56422. PMID 23431376 DOI: 10.1371/journal.pone.0056422  0.68
2013 Richardson JO, Wales DJ, Althorpe SC, McLaughlin RP, Viant MR, Shih O, Saykally RJ. Investigation of terahertz vibration-rotation tunneling spectra for the water octamer. The Journal of Physical Chemistry. A. 117: 6960-6. PMID 23286830 DOI: 10.1021/jp311306a  0.68
2013 Dunn WB, Erban A, Weber RJM, Creek DJ, Brown M, Breitling R, Hankemeier T, Goodacre R, Neumann S, Kopka J, Viant MR. Mass appeal: Metabolite identification in mass spectrometry-focused untargeted metabolomics Metabolomics. 9: 44-66. DOI: 10.1007/s11306-012-0434-4  0.68
2013 Viant MR, Sommer U. Mass spectrometry based environmental metabolomics: A primer and review Metabolomics. 9: 144-158. DOI: 10.1007/s11306-012-0412-x  0.68
2012 Dove AD, Leisen J, Zhou M, Byrne JJ, Lim-Hing K, Webb HD, Gelbaum L, Viant MR, Kubanek J, Fernández FM. Biomarkers of whale shark health: a metabolomic approach. Plos One. 7: e49379. PMID 23166652 DOI: 10.1371/journal.pone.0049379  0.68
2012 Weber RJ, Li E, Bruty J, He S, Viant MR. MaConDa: a publicly accessible mass spectrometry contaminants database. Bioinformatics (Oxford, England). 28: 2856-7. PMID 22954629 DOI: 10.1093/bioinformatics/bts527  0.68
2012 Ashrafian H, Czibik G, Bellahcene M, Aksentijević D, Smith AC, Mitchell SJ, Dodd MS, Kirwan J, Byrne JJ, Ludwig C, Isackson H, Yavari A, Støttrup NB, Contractor H, Cahill TJ, ... ... Viant MR, et al. Fumarate is cardioprotective via activation of the Nrf2 antioxidant pathway. Cell Metabolism. 15: 361-71. PMID 22405071 DOI: 10.1016/j.cmet.2012.01.017  0.68
2012 Hrydziuszko O, Viant MR. Missing values in mass spectrometry based metabolomics: An undervalued step in the data processing pipeline Metabolomics. 8: 161-174. DOI: 10.1007/s11306-011-0366-4  0.68
2012 Ludwig C, Easton JM, Lodi A, Tiziani S, Manzoor SE, Southam AD, Byrne JJ, Bishop LM, He S, Arvanitis TN, Günther UL, Viant MR. Birmingham Metabolite Library: A publicly accessible database of 1-D 1H and 2-D 1H J-resolved NMR spectra of authentic metabolite standards (BML-NMR) Metabolomics. 8: 8-18. DOI: 10.1007/s11306-011-0347-7  0.68
2011 Williams TD, Turan N, Diab AM, Wu H, Mackenzie C, Bartie KL, Hrydziuszko O, Lyons BP, Stentiford GD, Herbert JM, Abraham JK, Katsiadaki I, Leaver MJ, Taggart JB, George SG, ... Viant MR, et al. Towards a system level understanding of non-model organisms sampled from the environment: a network biology approach. Plos Computational Biology. 7: e1002126. PMID 21901081 DOI: 10.1371/journal.pcbi.1002126  0.68
2011 Römer I, White TA, Baalousha M, Chipman K, Viant MR, Lead JR. Aggregation and dispersion of silver nanoparticles in exposure media for aquatic toxicity tests. Journal of Chromatography. A. 1218: 4226-33. PMID 21529813 DOI: 10.1016/j.chroma.2011.03.034  0.68
2011 Weber RJ, Southam AD, Sommer U, Viant MR. Characterization of isotopic abundance measurements in high resolution FT-ICR and Orbitrap mass spectra for improved confidence of metabolite identification. Analytical Chemistry. 83: 3737-43. PMID 21466230 DOI: 10.1021/ac2001803  0.68
2011 Poynton HC, Taylor NS, Hicks J, Colson K, Chan S, Clark C, Scanlan L, Loguinov AV, Vulpe C, Viant MR. Metabolomics of microliter hemolymph samples enables an improved understanding of the combined metabolic and transcriptional responses of Daphnia magna to cadmium. Environmental Science & Technology. 45: 3710-7. PMID 21417318 DOI: 10.1021/es1037222  0.68
2011 Southam AD, Lange A, Hines A, Hill EM, Katsu Y, Iguchi T, Tyler CR, Viant MR. Metabolomics reveals target and off-target toxicities of a model organophosphate pesticide to roach (Rutilus rutilus): implications for biomonitoring. Environmental Science & Technology. 45: 3759-67. PMID 21410251 DOI: 10.1021/es103814d  0.68
2011 Knowles TJ, Browning DF, Jeeves M, Maderbocus R, Rajesh S, Sridhar P, Manoli E, Emery D, Sommer U, Spencer A, Leyton DL, Squire D, Chaudhuri RR, Viant MR, Cunningham AF, et al. Structure and function of BamE within the outer membrane and the β-barrel assembly machine. Embo Reports. 12: 123-8. PMID 21212804 DOI: 10.1038/embor.2010.202  0.68
2011 Lodi A, Tiziani S, Khanim FL, Drayson MT, Günther UL, Bunce CM, Viant MR. Hypoxia triggers major metabolic changes in AML cells without altering indomethacin-induced TCA cycle deregulation. Acs Chemical Biology. 6: 169-75. PMID 20886892 DOI: 10.1021/cb900300j  0.68
2010 Taylor NS, Weber RJ, White TA, Viant MR. Discriminating between different acute chemical toxicities via changes in the daphnid metabolome. Toxicological Sciences : An Official Journal of the Society of Toxicology. 118: 307-17. PMID 20719749 DOI: 10.1093/toxsci/kfq247  0.68
2010 Van Scoy AR, Yu Lin C, Anderson BS, Philips BM, Martin MJ, McCall J, Todd CR, Crane D, Sowby ML, Viant MR, Tjeerdema RS. Metabolic responses produced by crude versus dispersed oil in Chinook salmon pre-smolts via NMR-based metabolomics. Ecotoxicology and Environmental Safety. 73: 710-7. PMID 20363027 DOI: 10.1016/j.ecoenv.2010.03.001  0.68
2010 Hrydziuszko O, Silva MA, Perera MT, Richards DA, Murphy N, Mirza D, Viant MR. Application of metabolomics to investigate the process of human orthotopic liver transplantation: a proof-of-principle study. Omics : a Journal of Integrative Biology. 14: 143-50. PMID 20210660 DOI: 10.1089/omi.2009.0139  0.68
2010 Easton JM, Harris LM, Viant MR, Peet AC, Arvanitis TN. Linked metabolites: a tool for the construction of directed metabolic graphs. Computers in Biology and Medicine. 40: 340-9. PMID 20138614 DOI: 10.1016/j.compbiomed.2010.01.005  0.68
2010 Hines A, Staff FJ, Widdows J, Compton RM, Falciani F, Viant MR. Discovery of metabolic signatures for predicting whole organism toxicology. Toxicological Sciences : An Official Journal of the Society of Toxicology. 115: 369-78. PMID 20064833 DOI: 10.1093/toxsci/kfq004  0.68
2010 Van Aggelen G, Ankley GT, Baldwin WS, Bearden DW, Benson WH, Chipman JK, Collette TW, Craft JA, Denslow ND, Embry MR, Falciani F, George SG, Helbing CC, Hoekstra PF, Iguchi T, ... ... Viant MR, et al. Integrating omic technologies into aquatic ecological risk assessment and environmental monitoring: hurdles, achievements, and future outlook. Environmental Health Perspectives. 118: 1-5. PMID 20056575 DOI: 10.1289/ehp.0900985  0.68
2010 Santos EM, Ball JS, Williams TD, Wu H, Ortega F, van Aerle R, Katsiadaki I, Falciani F, Viant MR, Chipman JK, Tyler CR. Identifying health impacts of exposure to copper using transcriptomics and metabolomics in a fish model. Environmental Science & Technology. 44: 820-6. PMID 20020678 DOI: 10.1021/es902558k  0.68
2010 Ludwig C, Viant MR. Two-dimensional J-resolved NMR spectroscopy: review of a key methodology in the metabolomics toolbox. Phytochemical Analysis : Pca. 21: 22-32. PMID 19904730 DOI: 10.1002/pca.1186  0.68
2010 Sinclair AJ, Viant MR, Ball AK, Burdon MA, Walker EA, Stewart PM, Rauz S, Young SP. NMR-based metabolomic analysis of cerebrospinal fluid and serum in neurological diseases--a diagnostic tool? Nmr in Biomedicine. 23: 123-32. PMID 19691132 DOI: 10.1002/nbm.1428  0.68
2010 Katsiadaki I, Williams TD, Ball JS, Bean TP, Sanders MB, Wu H, Santos EM, Brown MM, Baker P, Ortega F, Falciani F, Craft JA, Tyler CR, Viant MR, Chipman JK. Hepatic transcriptomic and metabolomic responses in the Stickleback (Gasterosteus aculeatus) exposed to ethinyl-estradiol. Aquatic Toxicology (Amsterdam, Netherlands). 97: 174-87. PMID 19665239 DOI: 10.1016/j.aquatox.2009.07.005  0.68
2010 Weber RJM, Viant MR. Bioinformatic approaches to processing and annotation of high-resolution mass spectrometry data Methodologies For Metabolomics: Experimental Strategies and Techniques. 159-173. DOI: 10.1017/CBO9780511996634.007  0.68
2010 Weber RJM, Viant MR. MI-Pack: Increased confidence of metabolite identification in mass spectra by integrating accurate masses and metabolic pathways Chemometrics and Intelligent Laboratory Systems. 104: 75-82. DOI: 10.1016/j.chemolab.2010.04.010  0.68
2009 Khanim FL, Hayden RE, Birtwistle J, Lodi A, Tiziani S, Davies NJ, Ride JP, Viant MR, Gunther UL, Mountford JC, Schrewe H, Green RM, Murray JA, Drayson MT, Bunce CM. Combined bezafibrate and medroxyprogesterone acetate: potential novel therapy for acute myeloid leukaemia. Plos One. 4: e8147. PMID 19997560 DOI: 10.1371/journal.pone.0008147  0.68
2009 Karakach TK, Knight R, Lenz EM, Viant MR, Walter JA. Analysis of time course 1H NMR metabolomics data by multivariate curve resolution. Magnetic Resonance in Chemistry : Mrc. 47: S105-17. PMID 19899105 DOI: 10.1002/mrc.2535  0.68
2009 Lin CY, Anderson BS, Phillips BM, Peng AC, Clark S, Voorhees J, Wu HD, Martin MJ, McCall J, Todd CR, Hsieh F, Crane D, Viant MR, Sowby ML, Tjeerdema RS. Characterization of the metabolic actions of crude versus dispersed oil in salmon smolts via NMR-based metabolomics. Aquatic Toxicology (Amsterdam, Netherlands). 95: 230-8. PMID 19850363 DOI: 10.1016/j.aquatox.2009.09.006  0.68
2009 Ludwig C, Ward DG, Martin A, Viant MR, Ismail T, Johnson PJ, Wakelam MJ, Günther UL. Fast targeted multidimensional NMR metabolomics of colorectal cancer. Magnetic Resonance in Chemistry : Mrc. 47: S68-73. PMID 19790200 DOI: 10.1002/mrc.2519  0.68
2009 Williams TD, Wu H, Santos EM, Ball J, Katsiadaki I, Brown MM, Baker P, Ortega F, Falciani F, Craft JA, Tyler CR, Chipman JK, Viant MR. Hepatic transcriptomic and metabolomic responses in the stickleback (Gasterosteus aculeatus) exposed to environmentally relevant concentrations of dibenzanthracene. Environmental Science & Technology. 43: 6341-8. PMID 19746735 DOI: 10.1021/es9008689  0.68
2009 He S, Li X, Viant MR, Yao X. Profiling MS proteomics data using smoothed non-linear energy operator and Bayesian additive regression trees. Proteomics. 9: 4176-91. PMID 19722190 DOI: 10.1002/pmic.200800502  0.68
2009 Parsons HM, Ludwig C, Viant MR. Line-shape analysis of J-resolved NMR spectra: application to metabolomics and quantification of intensity errors from signal processing and high signal congestion. Magnetic Resonance in Chemistry : Mrc. 47: S86-95. PMID 19701928 DOI: 10.1002/mrc.2501  0.68
2009 Payne TG, Southam AD, Arvanitis TN, Viant MR. A signal filtering method for improved quantification and noise discrimination in fourier transform ion cyclotron resonance mass spectrometry-based metabolomics data. Journal of the American Society For Mass Spectrometry. 20: 1087-95. PMID 19269189 DOI: 10.1016/j.jasms.2009.02.001  0.68
2009 Parsons HM, Ekman DR, Collette TW, Viant MR. Spectral relative standard deviation: a practical benchmark in metabolomics. The Analyst. 134: 478-85. PMID 19238283 DOI: 10.1039/b808986h  0.68
2009 Viant MR, Bearden DW, Bundy JG, Burton IW, Collette TW, Ekman DR, Ezernieks V, Karakach TK, Lin CY, Rochfort S, de Ropp JS, Teng Q, Tjeerdema RS, Walter JA, Wu H. International NMR-based environmental metabolomics intercomparison exercise. Environmental Science & Technology. 43: 219-25. PMID 19209610 DOI: 10.1021/es802198z  0.68
2009 Tiziani S, Lodi A, Khanim FL, Viant MR, Bunce CM, Günther UL. Metabolomic profiling of drug responses in acute myeloid leukaemia cell lines. Plos One. 4: e4251. PMID 19158949 DOI: 10.1371/journal.pone.0004251  0.68
2009 Viant MR. Applications of metabolomics to the environmental sciences Metabolomics. 5: 1-2. DOI: 10.1007/s11306-009-0157-3  0.68
2009 Bundy JG, Davey MP, Viant MR. Environmental metabolomics: A critical review and future perspectives Metabolomics. 5: 3-21. DOI: 10.1007/s11306-008-0152-0  0.68
2009 Taylor NS, Weber RJM, Southam AD, Payne TG, Hrydziuszko O, Arvanitis TN, Viant MR. A new approach to toxicity testing in Daphnia magna: Application of high throughput FT-ICR mass spectrometry metabolomics Metabolomics. 5: 44-58. DOI: 10.1007/s11306-008-0133-3  0.68
2009 Viant M. The fat of the land Planet Earth. 14-15.  0.68
2008 Southam AD, Easton JM, Stentiford GD, Ludwig C, Arvanitis TN, Viant MR. Metabolic changes in flatfish hepatic tumours revealed by NMR-based metabolomics and metabolic correlation networks. Journal of Proteome Research. 7: 5277-85. PMID 19367724 DOI: 10.1021/pr800353t  0.68
2008 Hawes TC, Hines AC, Viant MR, Bale JS, Worland MR, Convey P. Metabolomic fingerprint of cryo-stress in a freeze tolerant insect. Cryo Letters. 29: 505-15. PMID 19280054  0.68
2008 Viant MR. Recent developments in environmental metabolomics. Molecular Biosystems. 4: 980-6. PMID 19082136 DOI: 10.1039/b805354e  0.68
2008 Viant MR. Environmental metabolomics using 1H-NMR spectroscopy. Methods in Molecular Biology (Clifton, N.J.). 410: 137-50. PMID 18642599  0.68
2008 Xi Y, de Ropp JS, Viant MR, Woodruff DL, Yu P. Improved identification of metabolites in complex mixtures using HSQC NMR spectroscopy. Analytica Chimica Acta. 614: 127-33. PMID 18420042 DOI: 10.1016/j.aca.2008.03.024  0.68
2008 Tiziani S, Emwas AH, Lodi A, Ludwig C, Bunce CM, Viant MR, Günther UL. Optimized metabolite extraction from blood serum for 1H nuclear magnetic resonance spectroscopy. Analytical Biochemistry. 377: 16-23. PMID 18312846 DOI: 10.1016/j.ab.2008.01.037  0.68
2008 Tiziani S, Lodi A, Ludwig C, Parsons HM, Viant MR. Effects of the application of different window functions and projection methods on processing of 1H J-resolved nuclear magnetic resonance spectra for metabolomics. Analytica Chimica Acta. 610: 80-8. PMID 18267143 DOI: 10.1016/j.aca.2008.01.030  0.68
2008 Wu H, Southam AD, Hines A, Viant MR. High-throughput tissue extraction protocol for NMR- and MS-based metabolomics. Analytical Biochemistry. 372: 204-12. PMID 17963684 DOI: 10.1016/j.ab.2007.10.002  0.68
2007 Sumner LW, Amberg A, Barrett D, Beale MH, Beger R, Daykin CA, Fan TW, Fiehn O, Goodacre R, Griffin JL, Hankemeier T, Hardy N, Harnly J, Higashi R, Kopka J, ... ... Viant MR, et al. Proposed minimum reporting standards for chemical analysis Chemical Analysis Working Group (CAWG) Metabolomics Standards Initiative (MSI). Metabolomics : Official Journal of the Metabolomic Society. 3: 211-221. PMID 24039616 DOI: 10.1007/s11306-007-0082-2  0.68
2007 Blunt RE, Walsh KA, Ashton DK, Viant MR, Chipman JK. Knowledge transfer initiative between molecular biologists and environmental researchers and regulators. Environmental Science and Pollution Research International. 14: 293-6. PMID 17722763 DOI: 10.1065/espr2007.06.431  0.68
2007 Hines A, Yeung WH, Craft J, Brown M, Kennedy J, Bignell J, Stentiford GD, Viant MR. Comparison of histological, genetic, metabolomics, and lipid-based methods for sex determination in marine mussels. Analytical Biochemistry. 369: 175-86. PMID 17655819 DOI: 10.1016/j.ab.2007.06.008  0.68
2007 Parsons HM, Ludwig C, Günther UL, Viant MR. Improved classification accuracy in 1- and 2-dimensional NMR metabolomics data using the variance stabilising generalised logarithm transformation. Bmc Bioinformatics. 8: 234. PMID 17605789 DOI: 10.1186/1471-2105-8-234  0.68
2007 Hines A, Oladiran GS, Bignell JP, Stentiford GD, Viant MR. Direct sampling of organisms from the field and knowledge of their phenotype: key recommendations for environmental metabolomics. Environmental Science & Technology. 41: 3375-81. PMID 17539552 DOI: 10.1021/es062745w  0.68
2007 Southam AD, Payne TG, Cooper HJ, Arvanitis TN, Viant MR. Dynamic range and mass accuracy of wide-scan direct infusion nanoelectrospray fourier transform ion cyclotron resonance mass spectrometry-based metabolomics increased by the spectral stitching method. Analytical Chemistry. 79: 4595-602. PMID 17511421 DOI: 10.1021/ac062446p  0.68
2007 Viant MR. Revealing the metabolome of animal tissues using 1H nuclear magnetic resonance spectroscopy. Methods in Molecular Biology (Clifton, N.J.). 358: 229-46. PMID 17035689 DOI: 10.1007/978-1-59745-244-1_13  0.68
2007 Viant MR. Metabolomics of aquatic organisms: The new 'omics' on the block Marine Ecology Progress Series. 332: 301-306. DOI: 10.3354/meps332301  0.68
2007 Sansone SA, Waters MD, Viant MR. Databases and Standardisation of Reporting Methods for Metabolic Studies The Handbook of Metabonomics and Metabolomics. 227-239. DOI: 10.1016/B978-044452841-4/50009-6  0.68
2007 Viant MR, Ludwig C, Rhodes S, Günther UL, Allaway D. Validation of a urine metabolome fingerprint in dog for phenotypic classification Metabolomics. 3: 453-463. DOI: 10.1007/s11306-007-0092-0  0.68
2007 Sansone SA, Schober D, Atherton HJ, Fiehn O, Jenkins H, Rocca-Serra P, Rubtsov DV, Spasic I, Soldatova L, Taylor C, Tseng A, Viant MR. Metabolomics standards initiative: Ontology working group work in progress Metabolomics. 3: 249-256. DOI: 10.1007/s11306-007-0069-z  0.68
2007 Morrison N, Bearden D, Bundy JG, Collette T, Currie F, Davey MP, Haigh NS, Hancock D, Jones OAH, Rochfort S, Sansone SA, Štys D, Teng Q, Field D, Viant MRMR. Standard reporting requirements for biological samples in metabolomics experiments: Environmental context Metabolomics. 3: 203-210. DOI: 10.1007/s11306-007-0067-1  0.68
2007 Lin CY, Wu H, Tjeerdema RS, Viant MR. Evaluation of metabolite extraction strategies from tissue samples using NMR metabolomics Metabolomics. 3: 55-67. DOI: 10.1007/s11306-006-0043-1  0.68
2007 Rubtsov DV, Jenkins H, Ludwig C, Easton J, Viant MR, Günther U, Griffin JL, Hardy N. Proposed reporting requirements for the description of NMR-based metabolomics experiments Metabolomics. 3: 223-229. DOI: 10.1007/s11306-006-0040-4  0.68
2007 Turner MA, Viant MR, Teh SJ, Johnson ML. Developmental rates, structural asymmetry, and metabolic fingerprints of steelhead trout (Oncorhynchus mykiss) eggs incubated at two temperatures Fish Physiology and Biochemistry. 33: 59-72. DOI: 10.1007/s10695-006-9117-2  0.68
2007 Lee GC, De Ropp J, Viant MR, Woodruff DL, Yu P. Heuristic search for 2D NMR alignment to support metabolite identification Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4614: 447-458.  0.68
2007 Viant MR, Ludwig C, Günther UL. 1D and 2D NMR spectroscopy: From metabolic fingerprinting to profiling Rsc Biomolecular Sciences. 44-70.  0.68
2006 Rosenblum ES, Tjeerdema RS, Viant MR. Effects of temperature on host-pathogen-drug interactions in red abalone, Haliotis rufescens, determined by 1H NMR metabolomics. Environmental Science & Technology. 40: 7077-84. PMID 17154019 DOI: 10.1021/es061354e  0.68
2006 Viant MR, Pincetich CA, Tjeerdema RS. Metabolic effects of dinoseb, diazinon and esfenvalerate in eyed eggs and alevins of Chinook salmon (Oncorhynchus tshawytscha) determined by 1H NMR metabolomics. Aquatic Toxicology (Amsterdam, Netherlands). 77: 359-71. PMID 16488491 DOI: 10.1016/j.aquatox.2006.01.009  0.68
2006 Viant MR, Pincetich CA, Hinton DE, Tjeerdema RS. Toxic actions of dinoseb in medaka (Oryzias latipes) embryos as determined by in vivo 31P NMR, HPLC-UV and 1H NMR metabolomics. Aquatic Toxicology (Amsterdam, Netherlands). 76: 329-42. PMID 16290222 DOI: 10.1016/j.aquatox.2005.10.007  0.68
2006 Lin CY, Viant MR, Tjeerdema RS. Metabolomics: Methodologies and applications in the environmental sciences Journal of Pesticide Science. 31: 245-251. DOI: 10.1584/jpestics.31.245  0.68
2006 Xi Y, Ropp JS, Viant MR, Woodruff DL, Yu P. Automated screening for metabolites in complex mixtures using 2D COSY NMR spectroscopy Metabolomics. 2: 221-233. DOI: 10.1007/s11306-006-0036-0  0.68
2006 Werner I, Viant MR, Rosenblum ES, Gantner AS, Tjeerdema RS, Johnson ML. Cellular responses to temperature stress in steelhead trout (Onchorynchus mykiss) parr with different rearing histories Fish Physiology and Biochemistry. 32: 261-273. DOI: 10.1007/s10695-006-9105-6  0.68
2005 Harker HA, Viant MR, Keutsch FN, Michael EA, McLaughlin RP, Saykally RJ. Water pentamer: characterization of the torsional-puckering manifold by terahertz VRT spectroscopy. The Journal of Physical Chemistry. A. 109: 6483-97. PMID 16833993 DOI: 10.1021/jp051504s  0.68
2005 Stentiford GD, Viant MR, Ward DG, Johnson PJ, Martin A, Wenbin W, Cooper HJ, Lyons BP, Feist SW. Liver tumors in wild flatfish: a histopathological, proteomic, and metabolomic study. Omics : a Journal of Integrative Biology. 9: 281-99. PMID 16209641 DOI: 10.1089/omi.2005.9.281  0.68
2005 Viant MR, Lyeth BG, Miller MG, Berman RF. An NMR metabolomic investigation of early metabolic disturbances following traumatic brain injury in a mammalian model. Nmr in Biomedicine. 18: 507-16. PMID 16177961 DOI: 10.1002/nbm.980  0.68
2005 Pincetich CA, Viant MR, Hinton DE, Tjeerdema RS. Metabolic changes in Japanese medaka (Oryzias latipes) during embryogenesis and hypoxia as determined by in vivo 31P NMR. Comparative Biochemistry and Physiology. Toxicology & Pharmacology : Cbp. 140: 103-13. PMID 15792629 DOI: 10.1016/j.cca.2005.01.010  0.68
2005 Schmelzer KR, Johnson CS, Viant MR, Williams JF, Tjeerdema RS. Influence of organic carbon on reductive dechlorination of thiobencarb in California rice field soils. Pest Management Science. 61: 68-74. PMID 15593075 DOI: 10.1002/ps.948  0.68
2005 Viant MR, Bundy JG, Pincetich CA, de Ropp JS, Tjeerdema RS. NMR-derived developmental metabolic trajectories: An approach for visualizing the toxic actions of trichloroethylene during embryogenesis Metabolomics. 1: 149-158. DOI: 10.1007/s11306-005-4429-2  0.68
2005 Rosenblum ES, Viant MR, Braid BM, Moore JD, Friedman CS, Tjeerdema RS. Characterizing the metabolic actions of natural stresses in the California red abalone, Haliotis rufescens using 1H NMR metabolomics Metabolomics. 1: 199-209. DOI: 10.1007/s11306-005-4428-3  0.68
2004 TenBrook PL, Viant MR, Holstege DM, Williams JF, Tjeerdema RS. Characterization of California rice field soils susceptible to delayed phytotoxicity syndrome. Bulletin of Environmental Contamination and Toxicology. 73: 448-56. PMID 15386164 DOI: 10.1007/s00128-004-0450-9  0.68
2004 Purohit PV, Rocke DM, Viant MR, Woodruff DL. Discrimination models using variance-stabilizing transformation of metabolomic NMR data. Omics : a Journal of Integrative Biology. 8: 118-30. PMID 15268771 DOI: 10.1089/1536231041388348  0.68
2003 Viant MR, Rosenblum ES, Tieerdema RS. NMR-based metabolomics: a powerful approach for characterizing the effects of environmental stressors on organism health. Environmental Science & Technology. 37: 4982-9. PMID 14620827 DOI: 10.1021/es034281x  0.68
2003 Viant MR. Improved methods for the acquisition and interpretation of NMR metabolomic data. Biochemical and Biophysical Research Communications. 310: 943-8. PMID 14550295 DOI: 10.1016/j.bbrc.2003.09.092  0.68
2003 TenBrook PL, Kendall SM, Viant MR, Tjeerdema RS. Toxicokinetics and biotransformation of p-nitrophenol in red abalone (Haliotis rufescens). Aquatic Toxicology (Amsterdam, Netherlands). 62: 329-36. PMID 12595172 DOI: 10.1016/S0166-445X(02)00103-0  0.68
2003 Viant MR, Werner I, Rosenblum ES, Gantner AS, Tjeerdema RS, Johnson ML. Correlation between heat-shock protein induction and reduced metabolic condition in juvenile steelhead trout (Oncorhynchus mykiss) chronically exposed to elevated temperature Fish Physiology and Biochemistry. 29: 159-171. DOI: 10.1023/B:FISH.0000035938.92027.81  0.68
2002 Millam JR, Craig-Veit CB, Batchelder ME, Viant MR, Herbeck TM, Woods LW. An avian bioassay for environmental estrogens: the growth response of zebra finch (Taeniopygia guttata) chick oviduct to oral estrogens. Environmental Toxicology and Chemistry / Setac. 21: 2663-8. PMID 12463562  0.68
2002 Viant MR, Pincetich CA, Walton JH, Tjeerdema RS, Hinton DE. Utilizing in vivo nuclear magnetic resonance spectroscopy to study sublethal stress in aquatic organisms. Marine Environmental Research. 54: 553-7. PMID 12408616 DOI: 10.1016/S0141-1136(02)00193-9  0.68
2002 Viant MR, Walton JH, TenBrook PL, Tjeerdema RS. Sublethal actions of copper in abalone (Haliotis rufescens) as characterized by in vivo 31P NMR. Aquatic Toxicology (Amsterdam, Netherlands). 57: 139-51. PMID 11891003 DOI: 10.1016/S0166-445X(01)00195-3  0.68
2002 Quaglino AE, Craig-Veit CB, Viant MR, Erichsen AL, Fry DM, Millam JR. Oral estrogen masculinizes female zebra finch song system. Hormones and Behavior. 41: 236-41. PMID 11855909 DOI: 10.1006/hbeh.2001.1752  0.68
2001 Viant MR, Rosenblum ES, Tjeerdema RS. Optimized method for the determination of phosphoarginine in abalone tissue by high-performance liquid chromatography Journal of Chromatography B: Biomedical Sciences and Applications. 765: 107-111. PMID 11817304 DOI: 10.1016/S0378-4347(01)00428-5  0.68
2001 Keutsch FN, Fellers RS, Brown MG, Viant MR, Petersen PB, Saykally RJ. Hydrogen bond breaking dynamics of the water trimer in the translational and librational band region of liquid water. Journal of the American Chemical Society. 123: 5938-41. PMID 11414826 DOI: 10.1021/ja003683r  0.68
2001 Keutsch FN, Fellers RS, Viant MR, Saykally RJ. Far-infrared laser vibration-rotation-tunneling spectroscopy of water clusters in the librational band region of liquid water Journal of Chemical Physics. 114: 4005-4015. DOI: 10.1063/1.1337052  0.68
2001 Viant MR, Walton JH, Tjeerdema RS. Comparative sublethal actions of 3-trifluoromethyl-4-nitrophenol in marine molluscs as measured by in vivo 31P NMR Pesticide Biochemistry and Physiology. 71: 40-47. DOI: 10.1006/pest.2001.2554  0.68
2000 Viant MR, Millam JR, Delany ME, Fry DM. Regulation of brain-derived neurotrophic factor messenger RNA levels in avian hypothalamic slice cultures Neuroscience. 99: 373-380. PMID 10938443 DOI: 10.1016/S0306-4522(00)00167-6  0.68
1999 Brown MG, Viant MR, McLaughlin RP, Keoshian CJ, Michael E, Cruzan JD, Saykally RJ, Van Der Avoird A. Quantitative characterization of the water trimer torsional manifold by terahertz laser spectroscopy and theoretical analysis. II. (H2O)3 Journal of Chemical Physics. 111: 7789-7800.  0.68
1999 Viant MR, Brown MG, Cruzan JD, Saykally RJ, Geleijns M, Van Der Avoird A. Quantitative characterization of the (D2O)3 torsional manifold by terahertz laser spectroscopy and theoretical analysis Journal of Chemical Physics. 110: 4369-4381.  0.68
1998 Cruzan JD, Viant MR, Brown MG, Lucas DD, Liu K, Saykally RJ. Terahertz laser vibration-rotation-tunneling spectrum of the water pentamer-d10. Constraints on the bifurcation tunneling dynamics Chemical Physics Letters. 292: 667-676.  0.68
1997 Viant MR, Cruzan JD, Lucas DD, Brown MG, Liu K, Saykally RJ. Pseudorotation in water trimer isotopomers using terahertz laser spectroscopy Journal of Physical Chemistry A. 101: 9032-9041.  0.68
1997 Cruzan JD, Viant MR, Brown MG, Saykally RJ. Terahertz laser vibration - Rotation tunneling spectroscopy of the water tetramer Journal of Physical Chemistry A. 101: 9022-9031.  0.68
1996 Liu K, Brown MG, Viant MR, Cruzan JD, Saykally RJ. Far-infrared VRT spectroscopy of two water trimer isotopomers: vibrationally averaged structures and rearrangement dynamics. Molecular Physics. 89: 1373-96. PMID 11539422 DOI: 10.1080/002689796173246  0.68
1996 Liu K, Fellers RS, Viant MR, McLaughlin RP, Brown MG, Saykally RJ. A long path length pulsed slit valve appropriate for high temperature operation: Infrared spectroscopy of jet-cooled large water clusters and nucleotide bases Review of Scientific Instruments. 67: 410-416.  0.68
1995 Viant MR, Fellers RS, McLaughlin RP, Saykally RJ. Infrared laser spectroscopy of uracil in a pulsed slit jet The Journal of Chemical Physics. 103: 9502-9505.  0.68
1995 Carrington A, Leach CA, Marr AJ, Shaw AM, Viant MR, Hutson JM, Law MM. Microwave spectroscopy and interaction potential of the long-range He⋯Ar+ ion The Journal of Chemical Physics. 102: 2379-2403.  0.68
1993 Carrington A, Leach CA, Moss RE, Steimle TC, Viant MR, West YD. Microwave electronic spectroscopy, electric field dissociation and photofragmentation of the H2 + ion Journal of the Chemical Society, Faraday Transactions. 89: 603-614. DOI: 10.1039/FT9938900603  0.68
1993 Carrington A, Leach CA, Marr AJ, Pyne CH, Shaw AM, Viant MR, West YD. Near-dissociation microwave spectra of rare-gas diatomic ions Chemical Physics Letters. 212: 473-479. DOI: 10.1016/0009-2614(93)87231-Q  0.68
1993 Carrington A, Leach CA, Viant MR. Nuclear hyperfine structure in the electronic millimetre wave spectrum of H2 + Chemical Physics Letters. 206: 77-82. DOI: 10.1016/0009-2614(93)85520-X  0.68
1992 Carrington A, Leach CA, Marr AJ, Moss RE, Pyne CH, Viant MR, West YD, Kennedy RA, McNab IR. Spectroscopy of HD+ in high angular momentum states Chemical Physics. 166: 145-166. DOI: 10.1016/0301-0104(92)87015-2  0.68
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