Zhi Yue, Ph.D. - Publications

Affiliations: 
2011-2012 Chemistry University of Oklahoma, Norman, OK, United States 
 2012-2017 Pharmaceutical Sciences University of Maryland School of Pharmacy 
 2018- Chemistry University of Chicago, Chicago, IL 
Area:
Theoretical Chemistry, Computational Biophysics

11 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Li C, Yue Z, Espinoza-Fonseca LM, Voth GA. Multiscale Simulation Reveals Passive Proton Transport Through SERCA on the Microsecond Timescale. Biophysical Journal. PMID 32814059 DOI: 10.1016/J.Bpj.2020.07.027  1
2019 Tsai CC, Yue Z, Shen J. How Electrostatic Coupling Enables Conformational Plasticity in a Tyrosine Kinase. Journal of the American Chemical Society. PMID 31476863 DOI: 10.1021/Jacs.9B06064  1
2019 Yue Z, Li C, Voth GA, Swanson JMJ. Dynamic Protonation Dramatically Affects the Membrane Permeability of Drug-like Molecules. Journal of the American Chemical Society. PMID 31382734 DOI: 10.1021/Jacs.9B04387  1
2019 Liu R, Yue Z, Tsai CC, Shen J. Assessing Lysine and Cysteine Reactivities for Designing Targeted Covalent Kinase Inhibitors. Journal of the American Chemical Society. PMID 30945531 DOI: 10.1021/Jacs.8B13248  1
2018 Huang Y, Yue Z, Tsai CC, Henderson J, Shen J. Predicting Catalytic Proton Donors and Nucleophiles in Enzymes: How Adding Dynamics Helps Elucidate the Structure-Function Relationships. The Journal of Physical Chemistry Letters. PMID 29461836 DOI: 10.1021/Acs.Jpclett.8B00238  1
2018 Yue Z, Shen J. pH-Dependent cooperativity and existence of a dry molten globule in the folding of a miniprotein BBL. Physical Chemistry Chemical Physics : Pccp. PMID 29336449 DOI: 10.1039/C7Cp08296G  1
2017 Yue Z, Chen W, Zgurskaya HI, Shen J. Constant pH Molecular Dynamics Reveals How Proton Release Drives the Conformational Transition of a Transmembrane Efflux Pump. Journal of Chemical Theory and Computation. PMID 29117682 DOI: 10.1021/Acs.Jctc.7B00874  1
2017 Deredge DJ, Huang W, Hui C, Matsumura H, Yue Z, Moënne-Loccoz P, Shen J, Wintrode PL, Wilks A. Ligand-induced allostery in the interaction of the Pseudomonas aeruginosa heme binding protein with heme oxygenase. Proceedings of the National Academy of Sciences of the United States of America. PMID 28289188 DOI: 10.1073/Pnas.1606931114  1
2015 Zhu Y, Wu Z, Lu H, Yue Z. High‐mechanical‐strength ferrohydrogels with a magnetically dispersed phase as multifunctional crosslinkers Journal of Applied Polymer Science. 132: 41950. DOI: 10.1002/App.41950  0.01
2013 Chen W, Wallace JA, Yue Z, Shen JK. Introducing titratable water to all-atom molecular dynamics at constant pH. Biophysical Journal. 105: L15-7. PMID 23972860 DOI: 10.1016/J.Bpj.2013.06.036  1
2009 Yuan L, Yue Z, Chen H, Huang H, Zhao T. Biomacromolecular affinity: interactions between lysozyme and regioselectively sulfated chitosan. Colloids and Surfaces. B, Biointerfaces. 73: 346-50. PMID 19559579 DOI: 10.1016/J.Colsurfb.2009.06.003  0.04
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