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Vahid Abrishami - Publications

Affiliations: 
2012-2016 Natl. Center of Biotechnology (CSIC) 
Area:
Electron Microscopy; Single Particle Analysis; Image Processing
Website:
https://www.linkedin.com/in/vahid-abrishami-62464b65/
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10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Abrishami V, Ilca SL, Gomez-Blanco J, Rissanen I, Miguel de la Rosa-Trevín J, Reddy VS, Carazo JM, Huiskonen JT. Localized reconstruction in scipion expedites the analysis of symmetry mismatches in Cryo-EM data. Progress in Biophysics and Molecular Biology. PMID 32470354 DOI: 10.1016/j.pbiomolbio.2020.05.004  0.446
2017 Sorzano CO, Vargas J, Otón J, Abrishami V, de la Rosa-Trevín JM, Gómez-Blanco J, Vilas JL, Marabini R, Carazo JM. A review of resolution measures and related aspects in 3D Electron Microscopy. Progress in Biophysics and Molecular Biology. 124: 1-30. PMID 27666962 DOI: 10.1016/J.Pbiomolbio.2016.09.005  0.732
2016 de la Rosa-Trevín JM, Quintana A, Del Cano L, Zaldívar A, Foche I, Gutiérrez J, Gómez-Blanco J, Burguet-Castell J, Cuenca-Alba J, Abrishami V, Vargas J, Otón J, Sharov G, Vilas JL, Navas J, et al. Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy. Journal of Structural Biology. 195: 93-9. PMID 27108186 DOI: 10.1016/J.Jsb.2016.04.010  0.726
2016 Sorzano CO, Martín-Ramos A, Prieto F, Melero R, Martín-Benito J, Jonic S, Navas-Calvente J, Vargas J, Otón J, Abrishami V, de la Rosa-Trevín JM, Gómez-Blanco J, Vilas JL, Marabini R, Carazo JM. Local analysis of strains and rotations for macromolecular electron microscopy maps. Journal of Structural Biology. 195: 123-8. PMID 27102900 DOI: 10.1016/J.Jsb.2016.04.001  0.7
2015 Sorzano CO, Alcorlo M, de la Rosa-Trevín JM, Melero R, Foche I, Zaldívar-Peraza A, del Cano L, Vargas J, Abrishami V, Otón J, Marabini R, Carazo JM. Cryo-EM and the elucidation of new macromolecular structures: Random Conical Tilt revisited. Scientific Reports. 5: 14290. PMID 26390853 DOI: 10.1038/Srep14290  0.722
2015 Abrishami V, Bilbao-Castro JR, Vargas J, Marabini R, Carazo JM, Sorzano CO. A fast iterative convolution weighting approach for gridding-based direct Fourier three-dimensional reconstruction with correction for the contrast transfer function. Ultramicroscopy. 157: 79-87. PMID 26094203 DOI: 10.1016/J.Ultramic.2015.05.018  0.749
2015 Abrishami V, Vargas J, Li X, Cheng Y, Marabini R, Sorzano CÓ, Carazo JM. Alignment of direct detection device micrographs using a robust Optical Flow approach. Journal of Structural Biology. 189: 163-76. PMID 25681631 DOI: 10.1016/J.Jsb.2015.02.001  0.734
2015 Sorzano CO, Vargas J, de la Rosa-Trevín JM, Otón J, Álvarez-Cabrera AL, Abrishami V, Sesmero E, Marabini R, Carazo JM. A statistical approach to the initial volume problem in Single Particle Analysis by Electron Microscopy. Journal of Structural Biology. 189: 213-9. PMID 25637660 DOI: 10.1016/J.Jsb.2015.01.009  0.665
2013 Abrishami V, Zaldívar-Peraza A, de la Rosa-Trevín JM, Vargas J, Otón J, Marabini R, Shkolnisky Y, Carazo JM, Sorzano CO. A pattern matching approach to the automatic selection of particles from low-contrast electron micrographs. Bioinformatics (Oxford, England). 29: 2460-8. PMID 23958728 DOI: 10.1093/Bioinformatics/Btt429  0.757
2013 Vargas J, Abrishami V, Marabini R, de la Rosa-Trevín JM, Zaldivar A, Carazo JM, Sorzano COS. Particle quality assessment and sorting for automatic and semiautomatic particle-picking techniques. Journal of Structural Biology. 183: 342-353. PMID 23933392 DOI: 10.1016/J.Jsb.2013.07.015  0.756
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