William M. Shih - Publications

Affiliations: 
Biological Chemistry and Molecular Pharmacology Harvard Medical School, Boston, MA, United States 
Area:
Biomolecular Nanotechnology
Website:
http://www.fas.harvard.edu/~biophys/William_Shih.htm

60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Hahn J, Shih WM. Thermal cycling of DNA devices via associative strand displacement. Nucleic Acids Research. PMID 31584082 DOI: 10.1093/nar/gkz844  0.52
2019 Chou LYT, Shih WM. In vitro transcriptional regulation via nucleic-acid-based transcription factors. Acs Synthetic Biology. PMID 31574217 DOI: 10.1021/acssynbio.9b00242  0.36
2018 Nathwani B, Shih WM, Wong WP. Force Spectroscopy and Beyond: Innovations and Opportunities. Biophysical Journal. PMID 30447991 DOI: 10.1016/j.bpj.2018.10.021  0.36
2018 Bastings M, Anastassacos F, Ponnuswamy N, Leifer F, Cuneo G, Lin C, Ingber DE, Ryu JH, Shih WM. Modulation of cellular uptake of DNA origami through control over mass and shape. Nano Letters. PMID 29756442 DOI: 10.1021/acs.nanolett.8b00660  0.6
2017 Ponnuswamy N, Bastings MMC, Nathwani B, Ryu JH, Chou LYT, Vinther M, Li WA, Anastassacos FM, Mooney DJ, Shih WM. Oligolysine-based coating protects DNA nanostructures from low-salt denaturation and nuclease degradation. Nature Communications. 8: 15654. PMID 28561045 DOI: 10.1038/ncomms15654  0.36
2017 Perrault SD, Shih WM. Lipid Membrane Encapsulation of a 3D DNA Nano Octahedron. Methods in Molecular Biology (Clifton, N.J.). 1500: 165-184. PMID 27813008 DOI: 10.1007/978-1-4939-6454-3_12  0.48
2016 Wang P, Gaitanaros S, Lee S, Bathe M, Shih WM, Ke Y. Programming Self-Assembly of DNA Origami Honeycomb Two-Dimensional Lattices and Plasmonic Metamaterials. Journal of the American Chemical Society. PMID 27224641 DOI: 10.1021/jacs.6b03966  0.8
2016 Yang Y, Wang J, Shigematsu H, Xu W, Shih WM, Rothman JE, Lin C. Self-assembly of size-controlled liposomes on DNA nanotemplates. Nature Chemistry. 8: 476-83. PMID 27102682 DOI: 10.1038/nchem.2472  0.36
2016 Ke Y, Meyer T, Shih WM, Bellot G. Regulation at a distance of biomolecular interactions using a DNA origami nanoactuator. Nature Communications. 7: 10935. PMID 26988942 DOI: 10.1038/ncomms10935  0.8
2015 Schmidt TL, Beliveau BJ, Uca YO, Theilmann M, Da Cruz F, Wu CT, Shih WM. Scalable amplification of strand subsets from chip-synthesized oligonucleotide libraries. Nature Communications. 6: 8634. PMID 26567534 DOI: 10.1038/ncomms9634  0.8
2015 Hsu HC, Lin MH, Tsao LI. Examining the psychometric properties of the brief 'Menopausal Symptoms Distress Affecting Sleep Quality Scale'. Journal of Clinical Nursing. PMID 26388508 DOI: 10.1111/jocn.12958  0.4
2015 Raschle T, Lin C, Jungmann R, Shih WM, Wagner G. Controlled Co-reconstitution of Multiple Membrane Proteins in Lipid Bilayer Nanodiscs Using DNA as a Scaffold. Acs Chemical Biology. PMID 26356202 DOI: 10.1021/acschembio.5b00627  0.44
2015 Knudsen JB, Liu L, Bank Kodal AL, Madsen M, Li Q, Song J, Woehrstein JB, Wickham SF, Strauss MT, Schueder F, Vinther J, Krissanaprasit A, Gudnason D, Smith AA, Ogaki R, ... ... Shih WM, et al. Routing of individual polymers in designed patterns. Nature Nanotechnology. PMID 26322946 DOI: 10.1038/nnano.2015.190  0.48
2015 Lee WP, Wu PY, Shih WM, Lee MY, Ho LH. The effectiveness of the newly designed thermal gown on hypothermic patients after spinal surgery. Journal of Clinical Nursing. PMID 26147373 DOI: 10.1111/jocn.12873  0.32
2015 Tian Y, Wang T, Liu W, Xin HL, Li H, Ke Y, Shih WM, Gang O. Prescribed nanoparticle cluster architectures and low-dimensional arrays built using octahedral DNA origami frames. Nature Nanotechnology. 10: 637-44. PMID 26005999 DOI: 10.1038/nnano.2015.105  0.4
2015 Beliveau BJ, Boettiger AN, Avendaño MS, Jungmann R, McCole RB, Joyce EF, Kim-Kiselak C, Bantignies F, Fonseka CY, Erceg J, Hannan MA, Hoang HG, Colognori D, Lee JT, Shih WM, et al. Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes. Nature Communications. 6: 7147. PMID 25962338 DOI: 10.1038/ncomms8147  0.44
2015 Shih WM. Materials Science. Exploiting weak interactions in DNA self-assembly. Science (New York, N.Y.). 347: 1417-8. PMID 25814568 DOI: 10.1126/science.aaa9483  0.8
2015 Kocabey S, Kempter S, List J, Xing Y, Bae W, Schiffels D, Shih WM, Simmel FC, Liedl T. Membrane-assisted growth of DNA origami nanostructure arrays. Acs Nano. 9: 3530-9. PMID 25734977 DOI: 10.1021/acsnano.5b00161  0.48
2015 Chen CP, Hwang RL, Liu W, Shih WM, Chang SY. The influence of air-conditioning managerial scheme in hybrid-ventilated classrooms on students' thermal perception Indoor and Built Environment. 24: 761-770. DOI: 10.1177/1420326X14530587  0.32
2015 Knudsen JB, Liu L, Bank Kodal AL, Madsen M, Li Q, Song J, Woehrstein JB, Wickham SFJ, Strauss MT, Schueder F, Vinther J, Krissanaprasit A, Gudnason D, Smith AAA, Ogaki R, ... ... Shih WM, et al. Routing of individual polymers in designed patterns Nature Nanotechnology. DOI: 10.1038/nnano.2015.190  0.48
2014 Ke Y, Ong LL, Sun W, Song J, Dong M, Shih WM, Yin P. DNA brick crystals with prescribed depths. Nature Chemistry. 6: 994-1002. PMID 25343605 DOI: 10.1038/nchem.2083  0.8
2014 Hahn J, Wickham SF, Shih WM, Perrault SD. Addressing the instability of DNA nanostructures in tissue culture. Acs Nano. 8: 8765-75. PMID 25136758 DOI: 10.1021/nn503513p  0.48
2014 Perrault SD, Shih WM. Virus-inspired membrane encapsulation of DNA nanostructures to achieve in vivo stability. Acs Nano. 8: 5132-40. PMID 24694301 DOI: 10.1021/nn5011914  0.8
2014 Nickels PC, Ke Y, Jungmann R, Smith DM, Leichsenring M, Shih WM, Liedl T, Högberg B. DNA origami structures directly assembled from intact bacteriophages. Small (Weinheim An Der Bergstrasse, Germany). 10: 1765-9. PMID 24532395 DOI: 10.1002/smll.201303442  0.8
2014 Chen CP, Hwang RL, Shih WM. Effect of fee-for-service air-conditioning management in balancing thermal comfort and energy usage. International Journal of Biometeorology. 58: 1941-50. PMID 24510118 DOI: 10.1007/s00484-014-0796-6  0.32
2014 Jungmann R, Avendaño MS, Woehrstein JB, Dai M, Shih WM, Yin P. Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT. Nature Methods. 11: 313-8. PMID 24487583 DOI: 10.1038/nmeth.2835  0.8
2014 Sun ZY, Cheng Y, Kim M, Song L, Choi J, Kudahl UJ, Brusic V, Chowdhury B, Yu L, Seaman MS, Bellot G, Shih WM, Wagner G, Reinherz EL. Disruption of helix-capping residues 671 and 674 reveals a role in HIV-1 entry for a specialized hinge segment of the membrane proximal external region of gp41. Journal of Molecular Biology. 426: 1095-108. PMID 24075869 DOI: 10.1016/j.jmb.2013.09.030  0.8
2014 Liang HH, Chen CP, Hwang RL, Shih WM, Lo SC, Liao HY. Satisfaction of occupants toward indoor environment quality of certified green office buildings in Taiwan Building and Environment. 72: 232-242. DOI: 10.1016/j.buildenv.2013.11.007  0.32
2014 Liang HH, Chen CP, Hwang RL, Shih WM, Lo SC, Liao HY. Satisfaction of occupants toward indoor environment quality of certified green office buildings in Taiwan Building and Environment. 72: 232-242. DOI: 10.1016/j.buildenv.2013.11.007  0.32
2014 Liao HY, Hwang RL, Shih WM, Chen CP. Indoor environmental quality in green buildings under energy-efficient power management Indoor Air 2014 - 13th International Conference On Indoor Air Quality and Climate. 797-799.  0.32
2014 Liao HY, Hwang RL, Shih WM, Chen CP. Indoor environmental quality in green buildings under energy-efficient power management Indoor Air 2014 - 13th International Conference On Indoor Air Quality and Climate. 797-799.  0.32
2013 Pfitzner E, Wachauf C, Kilchherr F, Pelz B, Shih WM, Rief M, Dietz H. Rigid DNA beams for high-resolution single-molecule mechanics. Angewandte Chemie (International Ed. in English). 52: 7766-71. PMID 23794413 DOI: 10.1002/anie.201302727  0.8
2013 Ducani C, Kaul C, Moche M, Shih WM, Högberg B. Enzymatic production of 'monoclonal stoichiometric' single-stranded DNA oligonucleotides. Nature Methods. 10: 647-52. PMID 23727986 DOI: 10.1038/nmeth.2503  0.8
2013 Bellot G, McClintock MA, Chou JJ, Shih WM. DNA nanotubes for NMR structure determination of membrane proteins. Nature Protocols. 8: 755-70. PMID 23518667 DOI: 10.1038/nprot.2013.037  0.8
2013 Lin C, Perrault SD, Kwak M, Graf F, Shih WM. Purification of DNA-origami nanostructures by rate-zonal centrifugation. Nucleic Acids Research. 41: e40. PMID 23155067 DOI: 10.1093/nar/gks1070  0.8
2012 Ke Y, Bellot G, Voigt NV, Fradkov E, Shih WM. Two design strategies for enhancement of multilayer-DNA-origami folding: underwinding for specific intercalator rescue and staple-break positioning. Chemical Science (Royal Society of Chemistry : 2010). 3: 2587-2597. PMID 24653832 DOI: 10.1039/C2SC20446K  0.8
2012 Ke Y, Ong LL, Shih WM, Yin P. Three-dimensional structures self-assembled from DNA bricks. Science (New York, N.Y.). 338: 1177-83. PMID 23197527 DOI: 10.1126/science.1227268  0.8
2012 Derr ND, Goodman BS, Jungmann R, Leschziner AE, Shih WM, Reck-Peterson SL. Tug-of-war in motor protein ensembles revealed with a programmable DNA origami scaffold. Science (New York, N.Y.). 338: 662-5. PMID 23065903 DOI: 10.1126/science.1226734  0.8
2012 Lin C, Jungmann R, Leifer AM, Li C, Levner D, Church GM, Shih WM, Yin P. Submicrometre geometrically encoded fluorescent barcodes self-assembled from DNA. Nature Chemistry. 4: 832-9. PMID 23000997 DOI: 10.1038/nchem.1451  0.48
2012 Ke Y, Voigt NV, Gothelf KV, Shih WM. Multilayer DNA origami packed on hexagonal and hybrid lattices. Journal of the American Chemical Society. 134: 1770-4. PMID 22187940 DOI: 10.1021/ja209719k  0.8
2012 Shih WM, Chang SY, Hwang RL, Chen CP. The thermal perception of students and adaptive use of environmental controls in a hybrid-ventilated classroom 10th International Conference On Healthy Buildings 2012. 1: 747-748.  0.32
2012 Shih WM, Chang SY, Hwang RL, Chen CP. The thermal perception of students and adaptive use of environmental controls in a hybrid-ventilated classroom 10th International Conference On Healthy Buildings 2012. 1: 747-748.  0.32
2011 Pinheiro AV, Han D, Shih WM, Yan H. Challenges and opportunities for structural DNA nanotechnology. Nature Nanotechnology. 6: 763-72. PMID 22056726 DOI: 10.1038/nnano.2011.187  0.8
2011 Berardi MJ, Shih WM, Harrison SC, Chou JJ. Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searching. Nature. 476: 109-13. PMID 21785437 DOI: 10.1038/nature10257  0.8
2011 Bellot G, McClintock MA, Lin C, Shih WM. Recovery of intact DNA nanostructures after agarose gel-based separation. Nature Methods. 8: 192-4. PMID 21358621 DOI: 10.1038/nmeth0311-192  0.8
2010 Liedl T, Högberg B, Tytell J, Ingber DE, Shih WM. Self-assembly of three-dimensional prestressed tensegrity structures from DNA. Nature Nanotechnology. 5: 520-4. PMID 20562873 DOI: 10.1038/nnano.2010.107  0.8
2010 Shih WM, Lin C. Knitting complex weaves with DNA origami. Current Opinion in Structural Biology. 20: 276-82. PMID 20456942 DOI: 10.1016/j.sbi.2010.03.009  0.8
2009 Ke Y, Douglas SM, Liu M, Sharma J, Cheng A, Leung A, Liu Y, Shih WM, Yan H. Multilayer DNA origami packed on a square lattice. Journal of the American Chemical Society. 131: 15903-8. PMID 19807088 DOI: 10.1021/ja906381y  0.8
2009 Dietz H, Douglas SM, Shih WM. Folding DNA into twisted and curved nanoscale shapes. Science (New York, N.Y.). 325: 725-30. PMID 19661424 DOI: 10.1126/science.1174251  0.8
2009 Högberg B, Liedl T, Shih WM. Folding DNA origami from a double-stranded source of scaffold. Journal of the American Chemical Society. 131: 9154-5. PMID 19566089 DOI: 10.1021/ja902569x  0.8
2009 Douglas SM, Marblestone AH, Teerapittayanon S, Vazquez A, Church GM, Shih WM. Rapid prototyping of 3D DNA-origami shapes with caDNAno. Nucleic Acids Research. 37: 5001-6. PMID 19531737 DOI: 10.1093/nar/gkp436  0.64
2009 Douglas SM, Dietz H, Liedl T, Högberg B, Graf F, Shih WM. Self-assembly of DNA into nanoscale three-dimensional shapes. Nature. 459: 414-8. PMID 19458720 DOI: 10.1038/nature08016  0.8
2009 Douglas SM, Dietz H, Liedl T, Högberg B, Graf F, Shih WM. Self-assembly of DNA into nanoscale three-dimensional shapes (Nature (2009) 459 (414-418)) Nature. 459: 1154. DOI: 10.1038/nature08165  0.8
2009 Douglas SM, Dietz H, Liedl T, Högberg B, Graf F, Shih WM. Self-assembly of DNA into nanoscale three-dimensional shapes (Nature (2009) 459 (414-418)) Nature. 459: 1154. DOI: 10.1038/nature08165  0.8
2009 Douglas SM, Dietz H, Liedl T, Högberg B, Graf F, Marblestone AH, Teerapittayanon S, Vazquez A, Church GM, Shih WM. Design and self-assembly of DNA into nanoscale 3D shapes Siggraph 2009: Talks, Siggraph '09 0.8
2008 Chen MC, Lin TY, Huang KN, Shih WM, Chen HC, Tsai MC. [A project to improve nasal ice packs]. Hu Li Za Zhi the Journal of Nursing. 55: 61-8. PMID 18543186  0.32
2007 Douglas SM, Chou JJ, Shih WM. DNA-nanotube-induced alignment of membrane proteins for NMR structure determination. Proceedings of the National Academy of Sciences of the United States of America. 104: 6644-8. PMID 17404217 DOI: 10.1073/pnas.0700930104  0.8
2004 Shih WM, Quispe JD, Joyce GF. A 1.7-kilobase single-stranded DNA that folds into a nanoscale octahedron. Nature. 427: 618-21. PMID 14961116 DOI: 10.1038/nature02307  0.8
2001 Shih WM, Spudich JA. The myosin relay helix to converter interface remains intact throughout the actomyosin ATPase cycle. The Journal of Biological Chemistry. 276: 19491-4. PMID 11278776 DOI: 10.1074/jbc.M010887200  1
2000 Shih WM, Gryczynski Z, Lakowicz JR, Spudich JA. A FRET-based sensor reveals large ATP hydrolysis-induced conformational changes and three distinct states of the molecular motor myosin. Cell. 102: 683-94. PMID 11007486  1
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