Johannes C. Walter - Publications

Affiliations: 
Biological Chemistry and Molecular Pharmacology and Howard Hughes Medical Institute Harvard Medical School, Boston, MA, United States 
Area:
DNA replication and repair mechanisms
Website:
https://walter.hms.harvard.edu

81 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Deng L, Wu RA, Sonneville R, Kochenova OV, Labib K, Pellman D, Walter JC. Mitotic CDK Promotes Replisome Disassembly, Fork Breakage, and Complex DNA Rearrangements. Molecular Cell. 73: 915-929.e6. PMID 30849395 DOI: 10.1016/j.molcel.2018.12.021  1
2019 Wu RA, Semlow DR, Kamimae-Lanning AN, Kochenova OV, Chistol G, Hodskinson MR, Amunugama R, Sparks JL, Wang M, Deng L, Mimoso CA, Low E, Patel KJ, Walter JC. TRAIP is a master regulator of DNA interstrand crosslink repair. Nature. PMID 30842657 DOI: 10.1038/s41586-019-1002-0  1
2018 Sparks JL, Chistol G, Gao AO, Räschle M, Larsen NB, Mann M, Duxin JP, Walter JC. The CMG Helicase Bypasses DNA-Protein Cross-Links to Facilitate Their Repair. Cell. PMID 30595447 DOI: 10.1016/j.cell.2018.10.053  1
2018 Larsen NB, Gao AO, Sparks JL, Gallina I, Wu RA, Mann M, Räschle M, Walter JC, Duxin JP. Replication-Coupled DNA-Protein Crosslink Repair by SPRTN and the Proteasome in Xenopus Egg Extracts. Molecular Cell. PMID 30595436 DOI: 10.1016/j.molcel.2018.11.024  1
2018 Graham TGW, Carney SM, Walter JC, Loparo JJ. A single XLF dimer bridges DNA ends during nonhomologous end joining. Nature Structural & Molecular Biology. 25: 877-884. PMID 30177755 DOI: 10.1038/s41594-018-0120-y  1
2018 Amunugama R, Willcox S, Wu RA, Abdullah UB, El-Sagheer AH, Brown T, McHugh PJ, Griffith JD, Walter JC. Replication Fork Reversal during DNA Interstrand Crosslink Repair Requires CMG Unloading. Cell Reports. 23: 3419-3428. PMID 29924986 DOI: 10.1016/j.celrep.2018.05.061  1
2017 Graham TGW, Walter JC, Loparo JJ. Ensemble and Single-Molecule Analysis of Non-Homologous End Joining in Frog Egg Extracts. Methods in Enzymology. 591: 233-270. PMID 28645371 DOI: 10.1016/bs.mie.2017.03.020  1
2017 Dewar JM, Walter JC. Mechanisms of DNA replication termination. Nature Reviews. Molecular Cell Biology. PMID 28537574 DOI: 10.1038/nrm.2017.42  1
2017 Dewar JM, Low E, Mann M, Räschle M, Walter JC. CRL2(Lrr1) promotes unloading of the vertebrate replisome from chromatin during replication termination. Genes & Development. PMID 28235849 DOI: 10.1101/gad.291799.116  1
2016 Semlow DR, Zhang J, Budzowska M, Drohat AC, Walter JC. Replication-Dependent Unhooking of DNA Interstrand Cross-Links by the NEIL3 Glycosylase. Cell. 167: 498-511.e14. PMID 27693351 DOI: 10.1016/j.cell.2016.09.008  1
2016 Joukov V, Walter JC, De Nicolo A. Assays to Study Mitotic Centrosome and Spindle Pole Assembly and Regulation. Methods in Molecular Biology (Clifton, N.J.). 1413: 207-35. PMID 27193852 DOI: 10.1007/978-1-4939-3542-0_14  1
2016 Graham TG, Walter JC, Loparo JJ. Two-Stage Synapsis of DNA Ends during Non-homologous End Joining. Molecular Cell. 61: 850-8. PMID 26990988 DOI: 10.1016/j.molcel.2016.02.010  1
2015 Duxin JP, Walter JC. What is the DNA repair defect underlying Fanconi anemia? Current Opinion in Cell Biology. 37: 49-60. PMID 26512453 DOI: 10.1016/j.ceb.2015.09.002  1
2015 Dewar JM, Budzowska M, Walter JC. The mechanism of DNA replication termination in vertebrates. Nature. 525: 345-50. PMID 26322582 DOI: 10.1038/nature14887  1
2015 Budzowska M, Graham TG, Sobeck A, Waga S, Walter JC. Regulation of the Rev1-pol ζ complex during bypass of a DNA interstrand cross-link. The Embo Journal. 34: 1971-85. PMID 26071591 DOI: 10.15252/embj.201490878  1
2015 Räschle M, Smeenk G, Hansen RK, Temu T, Oka Y, Hein MY, Nagaraj N, Long DT, Walter JC, Hofmann K, Storchova Z, Cox J, Bekker-Jensen S, Mailand N, Mann M. DNA repair. Proteomics reveals dynamic assembly of repair complexes during bypass of DNA cross-links. Science (New York, N.Y.). 348: 1253671. PMID 25931565 DOI: 10.1126/science.1253671  1
2015 Chistol G, Walter JC. Single-Molecule Visualization of MCM2-7 DNA Loading: Seeing Is Believing. Cell. 161: 429-30. PMID 25910200 DOI: 10.1016/j.cell.2015.04.006  1
2015 Zhang J, Dewar JM, Budzowska M, Motnenko A, Cohn MA, Walter JC. DNA interstrand cross-link repair requires replication-fork convergence. Nature Structural & Molecular Biology. 22: 242-7. PMID 25643322 DOI: 10.1038/nsmb.2956  1
2014 Duxin JP, Dewar JM, Yardimci H, Walter JC. Repair of a DNA-protein crosslink by replication-coupled proteolysis. Cell. 159: 346-57. PMID 25303529 DOI: 10.1016/j.cell.2014.09.024  1
2014 Long DT, Joukov V, Budzowska M, Walter JC. BRCA1 promotes unloading of the CMG helicase from a stalled DNA replication fork. Molecular Cell. 56: 174-85. PMID 25219499 DOI: 10.1016/j.molcel.2014.08.012  1
2014 Joukov V, Walter JC, De Nicolo A. The Cep192-organized aurora A-Plk1 cascade is essential for centrosome cycle and bipolar spindle assembly. Molecular Cell. 55: 578-91. PMID 25042804 DOI: 10.1016/j.molcel.2014.06.016  1
2014 Slenn TJ, Morris B, Havens CG, Freeman RM, Takahashi TS, Walter JC. Thymine DNA glycosylase is a CRL4Cdt2 substrate. The Journal of Biological Chemistry. 289: 23043-55. PMID 24947512 DOI: 10.1074/jbc.M114.574194  1
2014 Zhang J, Walter JC. Mechanism and regulation of incisions during DNA interstrand cross-link repair. Dna Repair. 19: 135-42. PMID 24768452 DOI: 10.1016/j.dnarep.2014.03.018  1
2014 Klein Douwel D, Boonen RA, Long DT, Szypowska AA, Räschle M, Walter JC, Knipscheer P. XPF-ERCC1 acts in Unhooking DNA interstrand crosslinks in cooperation with FANCD2 and FANCP/SLX4. Molecular Cell. 54: 460-71. PMID 24726325 DOI: 10.1016/j.molcel.2014.03.015  1
2014 Yardimci H, Walter JC. Prereplication-complex formation: a molecular double take? Nature Structural & Molecular Biology. 21: 20-5. PMID 24389553 DOI: 10.1038/nsmb.2738  1
2013 Dewar JM, Walter JC. Chromosome biology: conflict management for replication and transcription. Current Biology : Cb. 23: R200-2. PMID 23473562 DOI: 10.1016/j.cub.2013.01.054  1
2013 Park J, Long DT, Lee KY, Abbas T, Shibata E, Negishi M, Luo Y, Schimenti JC, Gambus A, Walter JC, Dutta A. The MCM8-MCM9 complex promotes RAD51 recruitment at DNA damage sites to facilitate homologous recombination. Molecular and Cellular Biology. 33: 1632-44. PMID 23401855 DOI: 10.1128/MCB.01503-12  1
2012 Yardimci H, Wang X, Loveland AB, Tappin I, Rudner DZ, Hurwitz J, van Oijen AM, Walter JC. Bypass of a protein barrier by a replicative DNA helicase. Nature. 492: 205-9. PMID 23201686 DOI: 10.1038/nature11730  1
2012 Loveland AB, Habuchi S, Walter JC, van Oijen AM. A general approach to break the concentration barrier in single-molecule imaging. Nature Methods. 9: 987-92. PMID 22961247 DOI: 10.1038/nmeth.2174  1
2012 Knipscheer P, Räschle M, Schärer OD, Walter JC. Replication-coupled DNA interstrand cross-link repair in Xenopus egg extracts. Methods in Molecular Biology (Clifton, N.J.). 920: 221-43. PMID 22941607 DOI: 10.1007/978-1-61779-998-3_16  1
2012 Enoiu M, Ho TV, Long DT, Walter JC, Schärer OD. Construction of plasmids containing site-specific DNA interstrand cross-links for biochemical and cell biological studies. Methods in Molecular Biology (Clifton, N.J.). 920: 203-19. PMID 22941606 DOI: 10.1007/978-1-61779-998-3_15  1
2012 Long DT, Walter JC. A novel function for BRCA1 in crosslink repair. Molecular Cell. 46: 111-2. PMID 22541552 DOI: 10.1016/j.molcel.2012.04.010  1
2012 Yardimci H, Loveland AB, van Oijen AM, Walter JC. Single-molecule analysis of DNA replication in Xenopus egg extracts. Methods (San Diego, Calif.). 57: 179-86. PMID 22503776 DOI: 10.1016/j.ymeth.2012.03.033  1
2012 Salguero I, Guarino E, Shepherd ME, Deegan TD, Havens CG, MacNeill SA, Walter JC, Kearsey SE. Ribonucleotide reductase activity is coupled to DNA synthesis via proliferating cell nuclear antigen. Current Biology : Cb. 22: 720-6. PMID 22464192 DOI: 10.1016/j.cub.2012.02.070  1
2012 Havens CG, Shobnam N, Guarino E, Centore RC, Zou L, Kearsey SE, Walter JC. Direct role for proliferating cell nuclear antigen in substrate recognition by the E3 ubiquitin ligase CRL4Cdt2. The Journal of Biological Chemistry. 287: 11410-21. PMID 22303007 DOI: 10.1074/jbc.M111.337683  1
2011 Raman M, Havens CG, Walter JC, Harper JW. A genome-wide screen identifies p97 as an essential regulator of DNA damage-dependent CDT1 destruction. Molecular Cell. 44: 72-84. PMID 21981919 DOI: 10.1016/j.molcel.2011.06.036  1
2011 Fu YV, Yardimci H, Long DT, Ho TV, Guainazzi A, Bermudez VP, Hurwitz J, van Oijen A, Schärer OD, Walter JC. Selective bypass of a lagging strand roadblock by the eukaryotic replicative DNA helicase. Cell. 146: 931-41. PMID 21925316 DOI: 10.1016/j.cell.2011.07.045  1
2011 Havens CG, Walter JC. Mechanism of CRL4(Cdt2), a PCNA-dependent E3 ubiquitin ligase. Genes & Development. 25: 1568-82. PMID 21828267 DOI: 10.1101/gad.2068611  1
2011 Long DT, Räschle M, Joukov V, Walter JC. Mechanism of RAD51-dependent DNA interstrand cross-link repair. Science (New York, N.Y.). 333: 84-7. PMID 21719678 DOI: 10.1126/science.1204258  1
2011 Lebofsky R, van Oijen AM, Walter JC. DNA is a co-factor for its own replication in Xenopus egg extracts. Nucleic Acids Research. 39: 545-55. PMID 20861001 DOI: 10.1093/nar/gkq739  1
2010 Yardimci H, Loveland AB, Habuchi S, van Oijen AM, Walter JC. Uncoupling of sister replisomes during eukaryotic DNA replication. Molecular Cell. 40: 834-40. PMID 21145490 DOI: 10.1016/j.molcel.2010.11.027  1
2010 Joukov V, De Nicolo A, Rodriguez A, Walter JC, Livingston DM. Centrosomal protein of 192 kDa (Cep192) promotes centrosome-driven spindle assembly by engaging in organelle-specific Aurora A activation. Proceedings of the National Academy of Sciences of the United States of America. 107: 21022-7. PMID 21097701 DOI: 10.1073/pnas.1014664107  1
2010 Centore RC, Havens CG, Manning AL, Li JM, Flynn RL, Tse A, Jin J, Dyson NJ, Walter JC, Zou L. CRL4(Cdt2)-mediated destruction of the histone methyltransferase Set8 prevents premature chromatin compaction in S phase. Molecular Cell. 40: 22-33. PMID 20932472 DOI: 10.1016/j.molcel.2010.09.015  1
2010 Fu YV, Walter JC. DNA replication: metazoan Sld3 steps forward. Current Biology : Cb. 20: R515-7. PMID 20620904 DOI: 10.1016/j.cub.2010.05.033  1
2009 Knipscheer P, Räschle M, Smogorzewska A, Enoiu M, Ho TV, Schärer OD, Elledge SJ, Walter JC. The Fanconi anemia pathway promotes replication-dependent DNA interstrand cross-link repair. Science (New York, N.Y.). 326: 1698-701. PMID 19965384 DOI: 10.1126/science.1182372  1
2009 Havens CG, Walter JC. Docking of a specialized PIP Box onto chromatin-bound PCNA creates a degron for the ubiquitin ligase CRL4Cdt2. Molecular Cell. 35: 93-104. PMID 19595719 DOI: 10.1016/j.molcel.2009.05.012  1
2009 Lebofsky R, Takahashi T, Walter JC. DNA replication in nucleus-free Xenopus egg extracts. Methods in Molecular Biology (Clifton, N.J.). 521: 229-52. PMID 19563110 DOI: 10.1007/978-1-60327-815-7_13  1
2009 Kochaniak AB, Habuchi S, Loparo JJ, Chang DJ, Cimprich KA, Walter JC, van Oijen AM. Proliferating cell nuclear antigen uses two distinct modes to move along DNA. The Journal of Biological Chemistry. 284: 17700-10. PMID 19411704 DOI: 10.1074/jbc.M109.008706  1
2009 Räschle M, Knipscheer P, Enoiu M, Angelov T, Sun J, Griffith JD, Ellenberger TE, Schärer OD, Walter JC. Mechanism of Replication-Coupled DNA Interstrand Crosslink Repair (DOI:10.1016/j.cell.2008.08.030) Cell. 137: 972. DOI: 10.1016/j.cell.2009.05.009  1
2008 Räschle M, Knipscheer P, Knipsheer P, Enoiu M, Angelov T, Sun J, Griffith JD, Ellenberger TE, Schärer OD, Walter JC. Mechanism of replication-coupled DNA interstrand crosslink repair. Cell. 134: 969-80. PMID 18805090 DOI: 10.1016/j.cell.2008.08.030  1
2008 Takahashi TS, Basu A, Bermudez V, Hurwitz J, Walter JC. Cdc7-Drf1 kinase links chromosome cohesion to the initiation of DNA replication in Xenopus egg extracts. Genes & Development. 22: 1894-905. PMID 18628396 DOI: 10.1101/gad.1683308  1
2008 Robertson PD, Warren EM, Zhang H, Friedman DB, Lary JW, Cole JL, Tutter AV, Walter JC, Fanning E, Eichman BF. Domain architecture and biochemical characterization of vertebrate Mcm10. The Journal of Biological Chemistry. 283: 3338-48. PMID 18065420 DOI: 10.1074/jbc.M706267200  1
2007 Lebofsky R, Walter JC. New Myc-anisms for DNA replication and tumorigenesis? Cancer Cell. 12: 102-3. PMID 17692801 DOI: 10.1016/j.ccr.2007.07.013  1
2007 Arias EE, Walter JC. Strength in numbers: preventing rereplication via multiple mechanisms in eukaryotic cells. Genes & Development. 21: 497-518. PMID 17344412 DOI: 10.1101/gad.1508907  1
2006 Joukov V, Groen AC, Prokhorova T, Gerson R, White E, Rodriguez A, Walter JC, Livingston DM. The BRCA1/BARD1 heterodimer modulates ran-dependent mitotic spindle assembly. Cell. 127: 539-52. PMID 17081976 DOI: 10.1016/j.cell.2006.08.053  1
2006 Jin J, Arias EE, Chen J, Harper JW, Walter JC. A family of diverse Cul4-Ddb1-interacting proteins includes Cdt2, which is required for S phase destruction of the replication factor Cdt1. Molecular Cell. 23: 709-21. PMID 16949367 DOI: 10.1016/j.molcel.2006.08.010  1
2006 Tutter AV, Walter JC. Chromosomal DNA replication in a soluble cell-free system derived from Xenopus eggs. Methods in Molecular Biology (Clifton, N.J.). 322: 121-37. PMID 16739720 DOI: 10.1007/978-1-59745-000-3_9  1
2006 Pacek M, Tutter AV, Kubota Y, Takisawa H, Walter JC. Localization of MCM2-7, Cdc45, and GINS to the site of DNA unwinding during eukaryotic DNA replication. Molecular Cell. 21: 581-7. PMID 16483939 DOI: 10.1016/j.molcel.2006.01.030  1
2006 Petersen P, Chou DM, You Z, Hunter T, Walter JC, Walter G. Protein phosphatase 2A antagonizes ATM and ATR in a Cdk2- and Cdc7-independent DNA damage checkpoint. Molecular and Cellular Biology. 26: 1997-2011. PMID 16479016 DOI: 10.1128/MCB.26.5.1997-2011.2006  1
2006 Barbera AJ, Chodaparambil JV, Kelley-Clarke B, Joukov V, Walter JC, Luger K, Kaye KM. The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA. Science (New York, N.Y.). 311: 856-61. PMID 16469929 DOI: 10.1126/science.1120541  1
2006 Cvetic CA, Walter JC. Getting a grip on licensing: mechanism of stable Mcm2-7 loading onto replication origins. Molecular Cell. 21: 143-4. PMID 16427002 DOI: 10.1016/j.molcel.2006.01.003  1
2006 Senga T, Sivaprasad U, Zhu W, Park JH, Arias EE, Walter JC, Dutta A. PCNA is a cofactor for Cdt1 degradation by CUL4/DDB1-mediated N-terminal ubiquitination. The Journal of Biological Chemistry. 281: 6246-52. PMID 16407252 DOI: 10.1074/jbc.M512705200  1
2006 Arias EE, Walter JC. PCNA functions as a molecular platform to trigger Cdt1 destruction and prevent re-replication. Nature Cell Biology. 8: 84-90. PMID 16362051 DOI: 10.1038/ncb1346  1
2005 Takahashi TS, Walter JC. Cdc7-Drf1 is a developmentally regulated protein kinase required for the initiation of vertebrate DNA replication. Genes & Development. 19: 2295-300. PMID 16204181 DOI: 10.1101/gad.1339805  1
2005 Takahashi TS, Wigley DB, Walter JC. Pumps, paradoxes and ploughshares: mechanism of the MCM2-7 DNA helicase. Trends in Biochemical Sciences. 30: 437-44. PMID 16002295 DOI: 10.1016/j.tibs.2005.06.007  1
2005 Cvetic C, Walter JC. Eukaryotic origins of DNA replication: could you please be more specific? Seminars in Cell & Developmental Biology. 16: 343-53. PMID 15840443 DOI: 10.1016/j.semcdb.2005.02.009  1
2005 Byun TS, Pacek M, Yee MC, Walter JC, Cimprich KA. Functional uncoupling of MCM helicase and DNA polymerase activities activates the ATR-dependent checkpoint. Genes & Development. 19: 1040-52. PMID 15833913 DOI: 10.1101/gad.1301205  1
2005 Arias EE, Walter JC. Replication-dependent destruction of Cdt1 limits DNA replication to a single round per cell cycle in Xenopus egg extracts. Genes & Development. 19: 114-26. PMID 15598982 DOI: 10.1101/gad.1255805  1
2004 Takahashi TS, Yiu P, Chou MF, Gygi S, Walter JC. Recruitment of Xenopus Scc2 and cohesin to chromatin requires the pre-replication complex. Nature Cell Biology. 6: 991-6. PMID 15448702 DOI: 10.1038/ncb1177  1
2004 Arias EE, Walter JC. Initiation of DNA replication in Xenopus egg extracts. Frontiers in Bioscience : a Journal and Virtual Library. 9: 3029-45. PMID 15353335  1
2004 Pacek M, Walter JC. A requirement for MCM7 and Cdc45 in chromosome unwinding during eukaryotic DNA replication. The Embo Journal. 23: 3667-76. PMID 15329670 DOI: 10.1038/sj.emboj.7600369  1
2004 Ramachandran N, Hainsworth E, Bhullar B, Eisenstein S, Rosen B, Lau AY, Walter JC, LaBaer J. Self-assembling protein microarrays. Science (New York, N.Y.). 305: 86-90. PMID 15232106 DOI: 10.1126/science.1097639  1
2004 Pacek M, Prokhorova TA, Walter JC. Cdk1: unsung hero of S phase? Cell Cycle (Georgetown, Tex.). 3: 401-3. PMID 14752273  1
2003 Prokhorova TA, Mowrer K, Gilbert CH, Walter JC. DNA replication of mitotic chromatin in Xenopus egg extracts. Proceedings of the National Academy of Sciences of the United States of America. 100: 13241-6. PMID 14597706 DOI: 10.1073/pnas.2336104100  1
2003 Vashee S, Cvetic C, Lu W, Simancek P, Kelly TJ, Walter JC. Sequence-independent DNA binding and replication initiation by the human origin recognition complex. Genes & Development. 17: 1894-908. PMID 12897055 DOI: 10.1101/gad.1084203  1
2002 Van Hatten RA, Tutter AV, Holway AH, Khederian AM, Walter JC, Michael WM. The Xenopus Xmus101 protein is required for the recruitment of Cdc45 to origins of DNA replication. The Journal of Cell Biology. 159: 541-7. PMID 12438414 DOI: 10.1083/jcb.200207090  1
2002 Chou DM, Petersen P, Walter JC, Walter G. Protein phosphatase 2A regulates binding of Cdc45 to the prereplication complex. The Journal of Biological Chemistry. 277: 40520-7. PMID 12185086 DOI: 10.1074/jbc.M207226200  1
2002 Edwards MC, Tutter AV, Cvetic C, Gilbert CH, Prokhorova TA, Walter JC. MCM2-7 complexes bind chromatin in a distributed pattern surrounding the origin recognition complex in Xenopus egg extracts. The Journal of Biological Chemistry. 277: 33049-57. PMID 12087101 DOI: 10.1074/jbc.M204438200  1
2002 Wohlschlegel JA, Dhar SK, Prokhorova TA, Dutta A, Walter JC. Xenopus Mcm10 binds to origins of DNA replication after Mcm2-7 and stimulates origin binding of Cdc45. Molecular Cell. 9: 233-40. PMID 11864598 DOI: 10.1016/S1097-2765(02)00456-2  1
2000 Wohlschlegel JA, Dwyer BT, Dhar SK, Cvetic C, Walter JC, Dutta A. Inhibition of eukaryotic DNA replication by geminin binding to Cdt1. Science (New York, N.Y.). 290: 2309-12. PMID 11125146 DOI: 10.1126/science.290.5500.2309  1
2000 Walter JC. Evidence for sequential action of cdc7 and cdk2 protein kinases during initiation of DNA replication in Xenopus egg extracts. The Journal of Biological Chemistry. 275: 39773-8. PMID 11005825 DOI: 10.1074/jbc.M008107200  1
Show low-probability matches.