Johannes C. Walter - Related publications
Affiliations: | Biological Chemistry and Molecular Pharmacology and Howard Hughes Medical Institute | Harvard Medical School, Boston, MA, United States |
Area:
DNA replication and repair mechanismsWebsite:
https://walter.hms.harvard.edu
NOTE: We are testing a new system for identifying relevant work based on semantic analysis that identifies similarities between recently published papers and the current author's publications. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches.
50 most relevant papers in past 60 days:
50 most relevant papers in past 60 days:
| Year | Citation | Score | |
|---|---|---|---|
| 2021 | Li Y, Yuan J. Role of deubiquitinating enzymes in DNA double-strand break repair. Journal of Zhejiang University. Science. B. 22: 63-72. PMID 33448188 DOI: 10.1631/jzus.B2000309 | ||
| 2021 | Lu K, Liu C, Liu Y, Luo A, Chen J, Lei Z, Kong J, Xiao X, Zhang S, Wang YZ, Ma L, Dou SX, Wang PY, Li M, Li G, et al. Curaxin-Induced DNA Topology Alterations Trigger the Distinct Binding Response of CTCF and FACT at the Single-Molecule Level. Biochemistry. PMID 33570402 DOI: 10.1021/acs.biochem.1c00014 | ||
| 2021 | Vouzas AE, Gilbert DM. Mammalian DNA Replication Timing. Cold Spring Harbor Perspectives in Biology. PMID 33558366 DOI: 10.1101/cshperspect.a040162 | ||
| 2021 | Ghosh S, Ghosh A. Activation of DNA damage response signaling in mammalian cells by ionizing radiation. Free Radical Research. 1-35. PMID 33455476 DOI: 10.1080/10715762.2021.1876853 | ||
| 2021 | Wang M, Ngo V, Wang W. Deciphering the genetic code of DNA methylation. Briefings in Bioinformatics. PMID 33432324 DOI: 10.1093/bib/bbaa424 | ||
| 2021 | Cameron G, Yardimci H. Studying chromosome biology with single-molecule resolution in Xenopus laevis egg extracts. Essays in Biochemistry. PMID 33438722 DOI: 10.1042/EBC20200026 | ||
| 2021 | Weinhold E, Chakraborty B. DNA modification and visualization on an origami-based enzyme nano-factory. Nanoscale. PMID 33471009 DOI: 10.1039/d0nr07618j | ||
| 2021 | Lee KJ, Li Z. The CRK2-CYC13 complex functions as an S-phase cyclin-dependent kinase to promote DNA replication in Trypanosoma brucei. Bmc Biology. 19: 29. PMID 33568178 DOI: 10.1186/s12915-021-00961-1 | ||
| 2021 | Yu L, Lang Y, Guo J, Cai J, Shang ZF, Chen BPC. DNA-PKcs inhibition impairs HDAC6-mediated HSP90 chaperone function on Aurora A and enhances HDACs inhibitor-induced cell killing by increasing mitotic aberrant spindle assembly. Cell Cycle (Georgetown, Tex.). 1-14. PMID 33404279 DOI: 10.1080/15384101.2020.1867790 | ||
| 2021 | McKie SJ, Neuman KC, Maxwell A. DNA topoisomerases: Advances in understanding of cellular roles and multi-protein complexes via structure-function analysis. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e2000286. PMID 33480441 DOI: 10.1002/bies.202000286 | ||
| 2021 | Li G, Deng L, Huang N, Sun F. The Biological Roles of lncRNAs and Future Prospects in Clinical Application. Diseases (Basel, Switzerland). 9. PMID 33450825 DOI: 10.3390/diseases9010008 | ||
| 2021 | Li F, Yu W, Zhang J, Dong Y, Ding X, Ruan X, Gu Z, Yang D. Spatiotemporally programmable cascade hybridization of hairpin DNA in polymeric nanoframework for precise siRNA delivery. Nature Communications. 12: 1138. PMID 33602916 DOI: 10.1038/s41467-021-21442-7 | ||
| 2021 | Quinet A, Tirman S, Cybulla E, Meroni A, Vindigni A. To skip or not to skip: choosing repriming to tolerate DNA damage. Molecular Cell. PMID 33515486 DOI: 10.1016/j.molcel.2021.01.012 | ||
| 2021 | Hnízda A, Tesina P, Nguyen TB, Kukačka Z, Kater L, Chaplin A, Beckmann R, Ascher DB, Novák P, Blundell TL. SAP domain forms a flexible part of DNA aperture in Ku70/80. The Febs Journal. PMID 33511782 DOI: 10.1111/febs.15732 | ||
| 2021 | Wang J, Rojas P, Mao J, Mustè Sadurnì M, Garnier O, Xiao S, Higgs MR, Garcia P, Saponaro M. Persistence of RNA transcription during DNA replication delays duplication of transcription start sites until G2/M. Cell Reports. 34: 108759. PMID 33596418 DOI: 10.1016/j.celrep.2021.108759 | ||
| 2021 | Ishida H, Kono H. Torsional stress can regulate the unwrapping of two outer half superhelical turns of nucleosomal DNA. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33558240 DOI: 10.1073/pnas.2020452118 | ||
| 2021 | Schmit M, Bielinsky AK. Congenital Diseases of DNA Replication: Clinical Phenotypes and Molecular Mechanisms. International Journal of Molecular Sciences. 22. PMID 33477564 DOI: 10.3390/ijms22020911 | ||
| 2021 | Jiang H, Greenberg RA. Morning for irofulven, what could be fiNER? Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 33472911 DOI: 10.1158/1078-0432.CCR-20-4708 | ||
| 2021 | Cai R, Zhang S, Chen L, Li M, Zhang Y, Zhou N. Self-Assembled DNA Nanoflowers Triggered by a DNA Walker for Highly Sensitive Electrochemical Detection of . Acs Applied Materials & Interfaces. PMID 33470807 DOI: 10.1021/acsami.0c22062 | ||
| 2021 | Güllülü Ö, Hehlgans S, Mayer BE, Gößner I, Petraki C, Hoffmann M, Dombrowsky MJ, Kunzmann P, Hamacher K, Strebhardt K, Fokas E, Rödel C, Münch C, Rödel F. A spatial and functional interaction of a heterotetramer Survivin-DNA-PKcs complex in DNA damage response. Cancer Research. PMID 33408118 DOI: 10.1158/0008-5472.CAN-20-2931 | ||
| 2021 | Qiu S, Huang J. MRN complex is an essential effector of DNA damage repair. Journal of Zhejiang University. Science. B. 22: 31-37. PMID 33448185 DOI: 10.1631/jzus.B2000289 | ||
| 2021 | Iaccarino N, Cheng M, Qiu D, Pagano B, Amato J, Di Porzio A, Zhou J, Randazzo A, Mergny JL. Effects of sequence and base composition on the CD and TDS profiles of i-DNA. Angewandte Chemie (International Ed. in English). PMID 33617090 DOI: 10.1002/anie.202016822 | ||
| 2021 | Choi WL, Mok YG, Huh JH. Application of 5-Methylcytosine DNA Glycosylase to the Quantitative Analysis of DNA Methylation. International Journal of Molecular Sciences. 22. PMID 33499041 DOI: 10.3390/ijms22031072 | ||
| 2021 | Zhang M, Yang C, Tasan I, Zhao H. Expanding the Potential of Mammalian Genome Engineering Targeted DNA Integration. Acs Synthetic Biology. PMID 33596056 DOI: 10.1021/acssynbio.0c00576 | ||
| 2021 | Rattu P, Belzunces B, Haynes T, Skylaris CK, Khalid S. Translocation of flexible and tensioned ssDNA through designed hydrophobic nanopores with two constrictions. Nanoscale. PMID 33434242 DOI: 10.1039/d0nr04890a | ||
| 2021 | Kumari N, Raghavan SC. G-quadruplex DNA structures and their relevance in radioprotection. Biochimica Et Biophysica Acta. General Subjects. 1865: 129857. PMID 33508382 DOI: 10.1016/j.bbagen.2021.129857 | ||
| 2021 | Johnson DP, Chandrasekharan MB, Dutreix M, Bhaskara S. Targeting DNA Repair and Chromatin Crosstalk in Cancer Therapy. Cancers. 13. PMID 33498525 DOI: 10.3390/cancers13030381 | ||
| 2021 | Chandrasekaran AR. Nuclease resistance of DNA nanostructures. Nature Reviews. Chemistry. 1-15. PMID 33585701 DOI: 10.1038/s41570-021-00251-y | ||
| 2021 | Xu W, Lin Y, Zhao K, Li H, Tian Y, Ngatia JN, Ma Y, Sahu SK, Guo H, Guo X, Xu YC, Liu H, Kristiansen K, Lan T, Zhou X. An efficient pipeline for ancient DNA mapping and recovery of endogenous ancient DNA from whole-genome sequencing data. Ecology and Evolution. 11: 390-401. PMID 33437437 DOI: 10.1002/ece3.7056 | ||
| 2021 | Pathira Kankanamge LS, Perera HM, Griffin WC. Genome Repair Takes a Spotlight during the ACS TOXI Meeting. Chemical Research in Toxicology. PMID 33508200 DOI: 10.1021/acs.chemrestox.0c00438 | ||
| 2021 | Kitchner E, Chavez J, Ceresa L, Bus MM, Budowle B, Gryczynski Z. A novel approach for visualization and localization of small amounts of DNA on swabs to improve DNA collection and recovery process. The Analyst. PMID 33393553 DOI: 10.1039/d0an02043e | ||
| 2021 | Cheng M, Qiu D, Tamon L, Ištvánková E, Víšková P, Amrane S, Guédin A, Chen J, Lacroix L, Ju H, Trantírek L, Sahakyan AB, Zhou J, Mergny JL. Thermal and pH stabilities of i-DNA: confronting in vitro experiments with models and in-cell NMR data. Angewandte Chemie (International Ed. in English). PMID 33605024 DOI: 10.1002/anie.202016801 | ||
| 2021 | Hao N, Sullivan AE, Shearwin KE, Dodd IB. The loopometer: a quantitative in vivo assay for DNA-looping proteins. Nucleic Acids Research. PMID 33511418 DOI: 10.1093/nar/gkaa1284 | ||
| 2021 | Maiuri T, Hung CLK, Suart C, Begeja N, Barba-Bazan C, Peng Y, Savic N, Wong T, Truant R. DNA Repair in Huntington's Disease and Spinocerebellar Ataxias: Somatic Instability and Alternative Hypotheses. Journal of Huntington's Disease. 10: 165-173. PMID 33579859 DOI: 10.3233/JHD-200414 | ||
| 2021 | Nathans JF, Cornwell JA, Afifi MM, Paul D, Cappell SD. Cell cycle inertia underlies a bifurcation in cell fates after DNA damage. Science Advances. 7. PMID 33523889 DOI: 10.1126/sciadv.abe3882 | ||
| 2021 | Felipe C, Shin J, Kolomeisky AB. DNA Looping and DNA Conformational Fluctuations Can Accelerate Protein Target Search. The Journal of Physical Chemistry. B. PMID 33570939 DOI: 10.1021/acs.jpcb.0c09599 | ||
| 2021 | Dai L, Liu P, Hu X, Zhao X, Shao G, Tian Y. DNA origami: an outstanding platform for functions in nanophotonics and cancer therapy. The Analyst. PMID 33595553 DOI: 10.1039/d0an02160a | ||
| 2021 | Medan J, Sleebs BE, Lackovic K, Watson KG, Evison BJ, Phillips DR, Cutts SM. Development of an automated assay for accelerated in vitro detection of DNA adduct-inducing and crosslinking agents. Bioorganic & Medicinal Chemistry Letters. 127813. PMID 33486050 DOI: 10.1016/j.bmcl.2021.127813 | ||
| 2021 | Jeong SW, Kim MK, Zhao L, Yang SK, Jung JH, Lim HM, Lim S. Effects of Conserved Wedge Domain Residues on DNA Binding Activity of RecG Helicase. Frontiers in Genetics. 12: 634615. PMID 33613647 DOI: 10.3389/fgene.2021.634615 | ||
| 2021 | Song Y, Yang K, Sun T, Tang R. Development and validation of prognostic markers in sarcomas base on a multi-omics analysis. Bmc Medical Genomics. 14: 31. PMID 33509178 DOI: 10.1186/s12920-021-00876-4 | ||
| 2021 | Xavier C, Eduardoff M, Bertoglio B, Amory C, Berger C, Casas-Vargas A, Pallua J, Parson W. Evaluation of DNA Extraction Methods Developed for Forensic and Ancient DNA Applications Using Bone Samples of Different Age. Genes. 12. PMID 33499220 DOI: 10.3390/genes12020146 | ||
| 2021 | D'Amico AM, Vasquez KM. The multifaceted roles of DNA repair and replication proteins in aging and obesity. Dna Repair. 99: 103049. PMID 33529944 DOI: 10.1016/j.dnarep.2021.103049 | ||
| 2021 | Scozzi D, Cano M, Ma L, Zhou D, Zhu JH, O'Halloran JA, Goss CW, Rauseo AM, Liu Z, Sahu SK, Peritore V, Rocco M, Ricci A, Amodeo R, Aimati L, et al. Circulating mitochondrial DNA is an early indicator of severe illness and mortality from COVID-19. Jci Insight. PMID 33444289 DOI: 10.1172/jci.insight.143299 | ||
| 2021 | Zahn KE, Jensen RB, Wood RD, Doublié S. Human DNA polymerase θ harbors DNA end-trimming activity critical for DNA repair. Molecular Cell. PMID 33577776 DOI: 10.1016/j.molcel.2021.01.021 | ||
| 2021 | Fang N, Wang K, Tong D. An Algorithm for Gene Fragment Reconstruction. Interdisciplinary Sciences, Computational Life Sciences. PMID 33609237 DOI: 10.1007/s12539-021-00419-6 | ||
| 2021 | Nakamura K, Kustatscher G, Alabert C, Hödl M, Forne I, Völker-Albert M, Satpathy S, Beyer TE, Mailand N, Choudhary C, Imhof A, Rappsilber J, Groth A. Proteome dynamics at broken replication forks reveal a distinct ATM-directed repair response suppressing DNA double-strand break ubiquitination. Molecular Cell. PMID 33450211 DOI: 10.1016/j.molcel.2020.12.025 | ||
| 2021 | Guo Z, Wang YH, Xu H, Yuan CS, Zhou HH, Huang WH, Wang H, Zhang W. LncRNA linc00312 suppresses radiotherapy resistance by targeting DNA-PKcs and impairing DNA damage repair in nasopharyngeal carcinoma. Cell Death & Disease. 12: 69. PMID 33431817 DOI: 10.1038/s41419-020-03302-2 | ||
| 2021 | Pyne ALB, Noy A, Main KHS, Velasco-Berrelleza V, Piperakis MM, Mitchenall LA, Cugliandolo FM, Beton JG, Stevenson CEM, Hoogenboom BW, Bates AD, Maxwell A, Harris SA. Base-pair resolution analysis of the effect of supercoiling on DNA flexibility and major groove recognition by triplex-forming oligonucleotides. Nature Communications. 12: 1053. PMID 33594049 DOI: 10.1038/s41467-021-21243-y | ||
| 2021 | Chen K, Gularek F, Liu B, Weinhold E, Keyser UF. Electrical DNA Sequence Mapping Using Oligodeoxynucleotide Labels and Nanopores. Acs Nano. PMID 33478224 DOI: 10.1021/acsnano.0c07947 | ||
| 2021 | Basu A, Bobrovnikov DG, Ha T. DNA mechanics and its impact on biological processes. Journal of Molecular Biology. 166861. PMID 33539885 DOI: 10.1016/j.jmb.2021.166861 |