Stephen Todd Smale - Publications

1990- Microbiology, Immunology, and Molecular Genetics University of California, Los Angeles, Los Angeles, CA 
gene regulation during inflammatory and innate immune responses and during lymphocyte development and leukemogenesis

105 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Hsieh WY, Zhou QD, York AG, Williams KJ, Scumpia PO, Kronenberger EB, Hoi XP, Su B, Chi X, Bui VL, Khialeeva E, Kaplan A, Son YM, Divakaruni AS, Sun J, ... Smale ST, et al. Toll-Like Receptors Induce Signal-Specific Reprogramming of the Macrophage Lipidome. Cell Metabolism. PMID 32516576 DOI: 10.1016/j.cmet.2020.05.003  1
2020 Zhou QD, Chi X, Lee MS, Hsieh WY, Mkrtchyan JJ, Feng AC, He C, York AG, Bui VL, Kronenberger EB, Ferrari A, Xiao X, Daly AE, Tarling EJ, Damoiseaux R, ... ... Smale ST, et al. Interferon-mediated reprogramming of membrane cholesterol to evade bacterial toxins. Nature Immunology. PMID 32514064 DOI: 10.1038/s41590-020-0695-4  1
2019 Comoglio F, Simonatto M, Polletti S, Liu X, Smale ST, Barozzi I, Natoli G. Dissection of acute stimulus-inducible nucleosome remodeling in mammalian cells. Genes & Development. PMID 31371436 DOI: 10.1101/gad.326348.119  1
2018 Fu K, Chronis C, Soufi A, Bonora G, Edwards M, Smale ST, Zaret KS, Plath K, Pellegrini M. Comparison of reprogramming factor targets reveals both species-specific and conserved mechanisms in early iPSC reprogramming. Bmc Genomics. 19: 956. PMID 30577748 DOI: 10.1186/s12864-018-5326-1  1
2018 Rajbhandari P, Thomas BJ, Feng AC, Hong C, Wang J, Vergnes L, Sallam T, Wang B, Sandhu J, Seldin MM, Lusis AJ, Fong LG, Katz M, Lee R, Young SG, ... ... Smale ST, et al. IL-10 Signaling Remodels Adipose Chromatin Architecture to Limit Thermogenesis and Energy Expenditure. Cell. 172: 218-233.e17. PMID 29249357 DOI: 10.1016/j.cell.2017.11.019  1
2017 Purbey PK, Scumpia PO, Kim PJ, Tong AJ, Iwamoto KS, McBride WH, Smale ST. Defined Sensing Mechanisms and Signaling Pathways Contribute to the Global Inflammatory Gene Expression Output Elicited by Ionizing Radiation. Immunity. 47: 421-434.e3. PMID 28930658 DOI: 10.1016/j.immuni.2017.08.017  1
2017 Madigan CA, Cambier CJ, Kelly-Scumpia KM, Scumpia PO, Cheng TY, Zailaa J, Bloom BR, Moody DB, Smale ST, Sagasti A, Modlin RL, Ramakrishnan L. A Macrophage Response to Mycobacterium leprae Phenolic Glycolipid Initiates Nerve Damage in Leprosy. Cell. 170: 973-985.e10. PMID 28841420 DOI: 10.1016/j.cell.2017.07.030  1
2017 Scumpia PO, Botten GA, Norman JS, Kelly-Scumpia KM, Spreafico R, Ruccia AR, Purbey PK, Thomas BJ, Modlin RL, Smale ST. Opposing roles of Toll-like receptor and cytosolic DNA-STING signaling pathways for Staphylococcus aureus cutaneous host defense. Plos Pathogens. 13: e1006496. PMID 28704551 DOI: 10.1371/journal.ppat.1006496  1
2017 Schjerven H, Ayongaba EF, Aghajanirefah A, McLaughlin J, Cheng D, Geng H, Boyd JR, Eggesbø LM, Lindeman I, Heath JL, Park E, Witte ON, Smale ST, Frietze S, Müschen M. Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1 pre-B ALL. The Journal of Experimental Medicine. 214: 793-814. PMID 28190001 DOI: 10.1084/jem.20160049  1
2016 Tong AJ, Liu X, Thomas BJ, Lissner MM, Baker MR, Senagolage MD, Allred AL, Barish GD, Smale ST. A Stringent Systems Approach Uncovers Gene-Specific Mechanisms Regulating Inflammation. Cell. 165: 165-179. PMID 26924576 DOI: 10.1016/j.cell.2016.01.020  1
2015 Kayama H, Ramirez-Carrozzi VR, Yamamoto M, Mizutani T, Kuwata H, Iba H, Matsumoto M, Honda K, Smale ST, Takeda K. Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IκBζ. The Journal of Biological Chemistry. 290: 22446. PMID 26362542 DOI: 10.1074/jbc.A115.709965  1
2015 Arenzana TL, Schjerven H, Smale ST. Regulation of gene expression dynamics during developmental transitions by the Ikaros transcription factor. Genes & Development. 29: 1801-16. PMID 26314708 DOI: 10.1101/gad.266999.115  1
2015 Lissner MM, Thomas BJ, Wee K, Tong AJ, Kollmann TR, Smale ST. Age-Related Gene Expression Differences in Monocytes from Human Neonates, Young Adults, and Older Adults. Plos One. 10: e0132061. PMID 26147648 DOI: 10.1371/journal.pone.0132061  1
2015 Kayama H, Ramirez-Carrozzi VR, Yamamoto M, Mizutani T, Kuwata H, Iba H, Matsumoto M, Honda K, Smale ST, Takeda K. Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IκBζ. The Journal of Biological Chemistry. 290: 4815. PMID 25713407 DOI: 10.1074/jbc.A114.709965  1
2014 Smale ST, Natoli G. Transcriptional control of inflammatory responses. Cold Spring Harbor Perspectives in Biology. 6: a016261. PMID 25213094 DOI: 10.1101/cshperspect.a016261  1
2014 Heller JJ, Schjerven H, Li S, Lee A, Qiu J, Chen ZM, Smale ST, Zhou L. Restriction of IL-22-producing T cell responses and differential regulation of regulatory T cell compartments by zinc finger transcription factor Ikaros. Journal of Immunology (Baltimore, Md. : 1950). 193: 3934-46. PMID 25194055 DOI: 10.4049/jimmunol.1401234  1
2014 Smale ST, Tarakhovsky A, Natoli G. Chromatin contributions to the regulation of innate immunity. Annual Review of Immunology. 32: 489-511. PMID 24555473 DOI: 10.1146/annurev-immunol-031210-101303  1
2013 Smale ST, Plevy SE, Weinmann AS, Zhou L, Ramirez-Carrozzi VR, Pope SD, Bhatt DM, Tong AJ. Toward an understanding of the gene-specific and global logic of inducible gene transcription. Cold Spring Harbor Symposia On Quantitative Biology. 78: 61-8. PMID 24747344 DOI: 10.1101/sqb.2013.78.020313  1
2013 Schjerven H, McLaughlin J, Arenzana TL, Frietze S, Cheng D, Wadsworth SE, Lawson GW, Bensinger SJ, Farnham PJ, Witte ON, Smale ST. Selective regulation of lymphopoiesis and leukemogenesis by individual zinc fingers of Ikaros. Nature Immunology. 14: 1073-83. PMID 24013668 DOI: 10.1038/ni.2707  1
2013 Pandya-Jones A, Bhatt DM, Lin CH, Tong AJ, Smale ST, Black DL. Splicing kinetics and transcript release from the chromatin compartment limit the rate of Lipid A-induced gene expression. Rna (New York, N.Y.). 19: 811-27. PMID 23616639 DOI: 10.1261/rna.039081.113  1
2013 Ferreirós-Vidal I, Carroll T, Taylor B, Terry A, Liang Z, Bruno L, Dharmalingam G, Khadayate S, Cobb BS, Smale ST, Spivakov M, Srivastava P, Petretto E, Fisher AG, Merkenschlager M. Genome-wide identification of Ikaros targets elucidates its contribution to mouse B-cell lineage specification and pre-B-cell differentiation. Blood. 121: 1769-82. PMID 23303821 DOI: 10.1182/blood-2012-08-450114  1
2012 Xu J, Smale ST. Designing an enhancer landscape. Cell. 151: 929-31. PMID 23178114 DOI: 10.1016/j.cell.2012.11.007  1
2012 Bhatt DM, Pandya-Jones A, Tong AJ, Barozzi I, Lissner MM, Natoli G, Black DL, Smale ST. Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions. Cell. 150: 279-90. PMID 22817891 DOI: 10.1016/j.cell.2012.05.043  1
2011 Siggers T, Chang AB, Teixeira A, Wong D, Williams KJ, Ahmed B, Ragoussis J, Udalova IA, Smale ST, Bulyk ML. Principles of dimer-specific gene regulation revealed by a comprehensive characterization of NF-κB family DNA binding. Nature Immunology. 13: 95-102. PMID 22101729 DOI: 10.1038/ni.2151  1
2011 Kobayashi T, Matsuoka K, Sheikh SZ, Elloumi HZ, Kamada N, Hisamatsu T, Hansen JJ, Doty KR, Pope SD, Smale ST, Hibi T, Rothman PB, Kashiwada M, Plevy SE. NFIL3 is a regulator of IL-12 p40 in macrophages and mucosal immunity. Journal of Immunology (Baltimore, Md. : 1950). 186: 4649-55. PMID 21383239 DOI: 10.4049/jimmunol.1003888  1
2010 Mukhopadhyay S, Plüddemann A, Hoe JC, Williams KJ, Varin A, Makepeace K, Aknin ML, Bowdish DM, Smale ST, Barclay AN, Gordon S. Immune inhibitory ligand CD200 induction by TLRs and NLRs limits macrophage activation to protect the host from meningococcal septicemia. Cell Host & Microbe. 8: 236-47. PMID 20833375 DOI: 10.1016/j.chom.2010.08.005  1
2009 Xu J, Watts JA, Pope SD, Gadue P, Kamps M, Plath K, Zaret KS, Smale ST. Transcriptional competence and the active marking of tissue-specific enhancers by defined transcription factors in embryonic and induced pluripotent stem cells. Genes & Development. 23: 2824-38. PMID 20008934 DOI: 10.1101/gad.1861209  1
2009 Papathanasiou P, Attema JL, Karsunky H, Hosen N, Sontani Y, Hoyne GF, Tunningley R, Smale ST, Weissman IL. Self-renewal of the long-term reconstituting subset of hematopoietic stem cells is regulated by Ikaros. Stem Cells (Dayton, Ohio). 27: 3082-92. PMID 19816952 DOI: 10.1002/stem.232  1
2009 Ramirez-Carrozzi VR, Braas D, Bhatt DM, Cheng CS, Hong C, Doty KR, Black JC, Hoffmann A, Carey M, Smale ST. A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling. Cell. 138: 114-28. PMID 19596239 DOI: 10.1016/j.cell.2009.04.020  1
2009 Papathanasiou P, Attema JL, Karsunky H, Xu J, Smale ST, Weissman IL. Evaluation of the long-term reconstituting subset of hematopoietic stem cells with CD150. Stem Cells (Dayton, Ohio). 27: 2498-508. PMID 19593793 DOI: 10.1002/stem.170  1
2008 Zaret KS, Watts J, Xu J, Wandzioch E, Smale ST, Sekiya T. Pioneer factors, genetic competence, and inductive signaling: programming liver and pancreas progenitors from the endoderm. Cold Spring Harbor Symposia On Quantitative Biology. 73: 119-26. PMID 19028990 DOI: 10.1101/sqb.2008.73.040  1
2008 Reynaud D, Demarco IA, Reddy KL, Schjerven H, Bertolino E, Chen Z, Smale ST, Winandy S, Singh H. Regulation of B cell fate commitment and immunoglobulin heavy-chain gene rearrangements by Ikaros. Nature Immunology. 9: 927-36. PMID 18568028 DOI: 10.1038/ni.1626  1
2008 Kayama H, Ramirez-Carrozzi VR, Yamamoto M, Mizutani T, Kuwata H, Iba H, Matsumoto M, Honda K, Smale ST, Takeda K. Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IkappaBzeta. The Journal of Biological Chemistry. 283: 12468-77. PMID 18319258 DOI: 10.1074/jbc.M709965200  1
2007 Carey M, Smale ST. Methylation interference assay. Csh Protocols. 2007: pdb.prot4812. PMID 21356995 DOI: 10.1101/pdb.prot4812  1
2007 Carey M, Smale ST. Phosphate ethylation interference assay. Csh Protocols. 2007: pdb.prot4811. PMID 21356994 DOI: 10.1101/pdb.prot4811  1
2007 Carey M, Smale ST. Hydroxyl-radical footprinting. Csh Protocols. 2007: pdb.prot4810. PMID 21356993 DOI: 10.1101/pdb.prot4810  1
2007 Carey M, Smale ST. Micrococcal Nuclease-Southern Blot Assay: II. Capillary Transfer and Hybridization. Csh Protocols. 2007: pdb.prot4891. PMID 21356982 DOI: 10.1101/pdb.prot4891  1
2007 Carey M, Smale ST. Micrococcal Nuclease-Southern Blot Assay: I. MNase and Restriction Digestions. Csh Protocols. 2007: pdb.prot4890. PMID 21356981 DOI: 10.1101/pdb.prot4890  1
2007 Sridharan R, Smale ST. Predominant interaction of both Ikaros and Helios with the NuRD complex in immature thymocytes. The Journal of Biological Chemistry. 282: 30227-38. PMID 17681952 DOI: 10.1074/jbc.M702541200  1
2007 Attema JL, Papathanasiou P, Forsberg EC, Xu J, Smale ST, Weissman IL. Epigenetic characterization of hematopoietic stem cell differentiation using miniChIP and bisulfite sequencing analysis. Proceedings of the National Academy of Sciences of the United States of America. 104: 12371-6. PMID 17640913 DOI: 10.1073/pnas.0704468104  1
2007 Xu J, Pope SD, Jazirehi AR, Attema JL, Papathanasiou P, Watts JA, Zaret KS, Weissman IL, Smale ST. Pioneer factor interactions and unmethylated CpG dinucleotides mark silent tissue-specific enhancers in embryonic stem cells. Proceedings of the National Academy of Sciences of the United States of America. 104: 12377-82. PMID 17640912 DOI: 10.1073/pnas.0704579104  1
2007 Thompson EC, Cobb BS, Sabbattini P, Meixlsperger S, Parelho V, Liberg D, Taylor B, Dillon N, Georgopoulos K, Jumaa H, Smale ST, Fisher AG, Merkenschlager M. Ikaros DNA-binding proteins as integral components of B cell developmental-stage-specific regulatory circuits. Immunity. 26: 335-44. PMID 17363301 DOI: 10.1016/j.immuni.2007.02.010  1
2007 Zhou L, Nazarian AA, Xu J, Tantin D, Corcoran LM, Smale ST. An inducible enhancer required for Il12b promoter activity in an insulated chromatin environment. Molecular and Cellular Biology. 27: 2698-712. PMID 17242186 DOI: 10.1128/MCB.00788-06  1
2006 Cobb BS, Hertweck A, Smith J, O'Connor E, Graf D, Cook T, Smale ST, Sakaguchi S, Livesey FJ, Fisher AG, Merkenschlager M. A role for Dicer in immune regulation. The Journal of Experimental Medicine. 203: 2519-27. PMID 17060477 DOI: 10.1084/jem.20061692  1
2006 Li CC, Ramirez-Carrozzi VR, Smale ST. Pursuing gene regulation 'logic' via RNA interference and chromatin immunoprecipitation. Nature Immunology. 7: 692-7. PMID 16785883 DOI: 10.1038/ni0706-692  1
2006 Ramirez-Carrozzi VR, Nazarian AA, Li CC, Gore SL, Sridharan R, Imbalzano AN, Smale ST. Selective and antagonistic functions of SWI/SNF and Mi-2beta nucleosome remodeling complexes during an inflammatory response. Genes & Development. 20: 282-96. PMID 16452502 DOI: 10.1101/gad.1383206  1
2005 Cobb BS, Smale ST. Ikaros-family proteins: in search of molecular functions during lymphocyte development. Current Topics in Microbiology and Immunology. 290: 29-47. PMID 16480038  1
2005 Sanjabi S, Williams KJ, Saccani S, Zhou L, Hoffmann A, Ghosh G, Gerondakis S, Natoli G, Smale ST. A c-Rel subdomain responsible for enhanced DNA-binding affinity and selective gene activation. Genes & Development. 19: 2138-51. PMID 16166378 DOI: 10.1101/gad.1329805  1
2005 Cobb BS, Nesterova TB, Thompson E, Hertweck A, O'Connor E, Godwin J, Wilson CB, Brockdorff N, Fisher AG, Smale ST, Merkenschlager M. T cell lineage choice and differentiation in the absence of the RNase III enzyme Dicer. The Journal of Experimental Medicine. 201: 1367-73. PMID 15867090 DOI: 10.1084/jem.20050572  1
2005 Su RC, Sridharan R, Smale ST. Assembly of silent chromatin during thymocyte development. Seminars in Immunology. 17: 129-40. PMID 15737574 DOI: 10.1016/j.smim.2005.01.003  1
2004 Su RC, Brown KE, Saaber S, Fisher AG, Merkenschlager M, Smale ST. Dynamic assembly of silent chromatin during thymocyte maturation. Nature Genetics. 36: 502-6. PMID 15098035 DOI: 10.1038/ng1351  1
2004 Zhou L, Nazarian AA, Smale ST. Interleukin-10 inhibits interleukin-12 p40 gene transcription by targeting a late event in the activation pathway. Molecular and Cellular Biology. 24: 2385-96. PMID 14993278  1
2003 Cupit PM, Hansen JD, McCarty AS, White G, Chioda M, Spada F, Smale ST, Cunningham C. Ikaros family members from the agnathan Myxine glutinosa and the urochordate Oikopleura dioica: emergence of an essential transcription factor for adaptive immunity. Journal of Immunology (Baltimore, Md. : 1950). 171: 6006-13. PMID 14634112  1
2003 Liberg D, Smale ST, Merkenschlager M. Upstream of Ikaros. Trends in Immunology. 24: 567-70. PMID 14596876  1
2003 Papathanasiou P, Perkins AC, Cobb BS, Ferrini R, Sridharan R, Hoyne GF, Nelms KA, Smale ST, Goodnow CC. Widespread failure of hematolymphoid differentiation caused by a recessive niche-filling allele of the Ikaros transcription factor. Immunity. 19: 131-44. PMID 12871645  1
2003 Bradley MN, Zhou L, Smale ST. C/EBPbeta regulation in lipopolysaccharide-stimulated macrophages. Molecular and Cellular Biology. 23: 4841-58. PMID 12832471 DOI: 10.1128/MCB.23.14.4841-4858.2003  1
2003 Smale ST, Kadonaga JT. The RNA polymerase II core promoter. Annual Review of Biochemistry. 72: 449-79. PMID 12651739 DOI: 10.1146/annurev.biochem.72.121801.161520  0.96
2003 McCarty AS, Kleiger G, Eisenberg D, Smale ST. Selective dimerization of a C2H2 zinc finger subfamily. Molecular Cell. 11: 459-70. PMID 12620233 DOI: 10.1016/S1097-2765(03)00043-1  1
2002 Dovat S, Ronni T, Russell D, Ferrini R, Cobb BS, Smale ST. A common mechanism for mitotic inactivation of C2H2 zinc finger DNA-binding domains. Genes & Development. 16: 2985-90. PMID 12464629 DOI: 10.1101/gad.1040502  1
2002 Smale ST, Fisher AG. Chromatin structure and gene regulation in the immune system. Annual Review of Immunology. 20: 427-62. PMID 11861609 DOI: 10.1146/annurev.immunol.20.100301.064739  1
2001 Liston DR, Lau AO, Ortiz D, Smale ST, Johnson PJ. Initiator recognition in a primitive eukaryote: IBP39, an initiator-binding protein from Trichomonas vaginalis. Molecular and Cellular Biology. 21: 7872-82. PMID 11604521 DOI: 10.1128/MCB.21.22.7872-7882.2001  1
2001 Smale ST. Core promoters: active contributors to combinatorial gene regulation. Genes & Development. 15: 2503-8. PMID 11581155 DOI: 10.1101/gad.937701  1
2001 Trinh LA, Ferrini R, Cobb BS, Weinmann AS, Hahm K, Ernst P, Garraway IP, Merkenschlager M, Smale ST. Down-regulation of TDT transcription in CD4(+)CD8(+) thymocytes by Ikaros proteins in direct competition with an Ets activator. Genes & Development. 15: 1817-32. PMID 11459831 DOI: 10.1101/gad.905601  1
2001 Weinmann AS, Mitchell DM, Sanjabi S, Bradley MN, Hoffmann A, Liou HC, Smale ST. Nucleosome remodeling at the IL-12 p40 promoter is a TLR-dependent, Rel-independent event. Nature Immunology. 2: 51-7. PMID 11135578 DOI: 10.1038/83168  1
2000 Sanjabi S, Hoffmann A, Liou HC, Baltimore D, Smale ST. Selective requirement for c-Rel during IL-12 P40 gene induction in macrophages. Proceedings of the National Academy of Sciences of the United States of America. 97: 12705-10. PMID 11058167 DOI: 10.1073/pnas.230436397  1
2000 Cobb BS, Morales-Alcelay S, Kleiger G, Brown KE, Fisher AG, Smale ST. Targeting of Ikaros to pericentromeric heterochromatin by direct DNA binding. Genes & Development. 14: 2146-60. PMID 10970879 DOI: 10.1101/gad.816400  1
2000 Brightbill HD, Plevy SE, Modlin RL, Smale ST. A prominent role for Sp1 during lipopolysaccharide-mediated induction of the IL-10 promoter in macrophages. Journal of Immunology (Baltimore, Md. : 1950). 164: 1940-51. PMID 10657644  1
1999 Ernst P, Hahm K, Cobb BS, Brown KE, Trinh LA, McCarty AS, Merkenschlager M, Klug CA, Fisher AG, Smale ST. Mechanisms of transcriptional regulation in lymphocyte progenitors: insight from an analysis of the terminal transferase promoter. Cold Spring Harbor Symposia On Quantitative Biology. 64: 87-97. PMID 11232341  1
1999 Weinmann AS, Plevy SE, Smale ST. Rapid and selective remodeling of a positioned nucleosome during the induction of IL-12 p40 transcription. Immunity. 11: 665-75. PMID 10626889  1
1999 Brightbill HD, Libraty DH, Krutzik SR, Yang RB, Belisle JT, Bleharski JR, Maitland M, Norgard MV, Plevy SE, Smale ST, Brennan PJ, Bloom BR, Godowski PJ, Modlin RL. Host defense mechanisms triggered by microbial lipoproteins through toll-like receptors. Science (New York, N.Y.). 285: 732-6. PMID 10426995 DOI: 10.1126/science.285.5428.732  1
1998 Smale ST, Jain A, Kaufmann J, Emami KH, Lo K, Garraway IP. The initiator element: a paradigm for core promoter heterogeneity within metazoan protein-coding genes. Cold Spring Harbor Symposia On Quantitative Biology. 63: 21-31. PMID 10384267  1
1998 Hahm K, Cobb BS, McCarty AS, Brown KE, Klug CA, Lee R, Akashi K, Weissman IL, Fisher AG, Smale ST. Helios, a T cell-restricted Ikaros family member that quantitatively associates with Ikaros at centromeric heterochromatin. Genes & Development. 12: 782-96. PMID 9512513  1
1998 Emami KH, Burke TW, Smale ST. Sp1 activation of a TATA-less promoter requires a species-specific interaction involving transcription factor IID. Nucleic Acids Research. 26: 839-46. PMID 9443978 DOI: 10.1093/nar/26.3.839  1
1998 Klug CA, Morrison SJ, Masek M, Hahm K, Smale ST, Weissman IL. Hematopoietic stem cells and lymphoid progenitors express different Ikaros isoforms, and Ikaros is localized to heterochromatin in immature lymphocytes. Proceedings of the National Academy of Sciences of the United States of America. 95: 657-62. PMID 9435248 DOI: 10.1073/pnas.95.2.657  1
1998 Kaufmann J, Ahrens K, Koop R, Smale ST, Müller R. CIF150, a human cofactor for transcription factor IID-dependent initiator function. Molecular and Cellular Biology. 18: 233-9. PMID 9418870 DOI: 10.1128/MCB.18.1.233  1
1997 Brown KE, Guest SS, Smale ST, Hahm K, Merkenschlager M, Fisher AG. Association of transcriptionally silent genes with Ikaros complexes at centromeric heterochromatin. Cell. 91: 845-54. PMID 9413993 DOI: 10.1016/S0092-8674(00)80472-9  1
1997 Emami KH, Jain A, Smale ST. Mechanism of synergy between TATA and initiator: synergistic binding of TFIID following a putative TFIIA-induced isomerization. Genes & Development. 11: 3007-19. PMID 9367983  1
1997 Plevy SE, Gemberling JH, Hsu S, Dorner AJ, Smale ST. Multiple control elements mediate activation of the murine and human interleukin 12 p40 promoters: evidence of functional synergy between C/EBP and Rel proteins. Molecular and Cellular Biology. 17: 4572-88. PMID 9234715  1
1997 Smale ST. Transcription initiation from TATA-less promoters within eukaryotic protein-coding genes. Biochimica Et Biophysica Acta. 1351: 73-88. PMID 9116046 DOI: 10.1016/S0167-4781(96)00206-0  1
1996 Lo K, Smale ST. Generality of a functional initiator consensus sequence. Gene. 182: 13-22. PMID 8982062 DOI: 10.1016/S0378-1119(96)00438-6  1
1996 Ernst P, Hahm K, Trinh L, Davis JN, Roussel MF, Turck CW, Smale ST. A potential role for Elf-1 in terminal transferase gene regulation. Molecular and Cellular Biology. 16: 6121-31. PMID 8887642  1
1996 Kaufmann J, Verrijzer CP, Shao J, Smale ST. CIF, an essential cofactor for TFIID-dependent initiator function. Genes & Development. 10: 873-86. PMID 8846923  1
1996 Garraway IP, Semple K, Smale ST. Transcription of the lymphocyte-specific terminal deoxynucleotidyltransferase gene requires a specific core promoter structure. Proceedings of the National Academy of Sciences of the United States of America. 93: 4336-41. PMID 8633066 DOI: 10.1073/pnas.93.9.4336  1
1995 Ernst P, Smale ST. Combinatorial regulation of transcription II: The immunoglobulin mu heavy chain gene. Immunity. 2: 427-38. PMID 7749979 DOI: 10.1016/1074-7613(95)90024-1  1
1995 Ernst P, Smale ST. Combinatorial regulation of transcription. I: General aspects of transcriptional control. Immunity. 2: 311-9. PMID 7719936 DOI: 10.1016/1074-7613(95)90139-6  1
1995 Emami KH, Navarre WW, Smale ST. Core promoter specificities of the Sp1 and VP16 transcriptional activation domains. Molecular and Cellular Biology. 15: 5906-16. PMID 7565743  1
1994 Javahery R, Khachi A, Lo K, Zenzie-Gregory B, Smale ST. DNA sequence requirements for transcriptional initiator activity in mammalian cells. Molecular and Cellular Biology. 14: 116-27. PMID 8264580  1
1994 Quon DV, Delgadillo MG, Khachi A, Smale ST, Johnson PJ. Similarity between a ubiquitous promoter element in an ancient eukaryote and mammalian initiator elements. Proceedings of the National Academy of Sciences of the United States of America. 91: 4579-83. PMID 8183951  1
1994 Hahm K, Ernst P, Lo K, Kim GS, Turck C, Smale ST. The lymphoid transcription factor LyF-1 is encoded by specific, alternatively spliced mRNAs derived from the Ikaros gene. Molecular and Cellular Biology. 14: 7111-23. PMID 7935426  1
1994 Kaufmann J, Smale ST. Direct recognition of initiator elements by a component of the transcription factor IID complex. Genes & Development. 8: 821-9. PMID 7926770  1
1993 Ernst P, Hahm K, Smale ST. Both LyF-1 and an Ets protein interact with a critical promoter element in the murine terminal transferase gene. Molecular and Cellular Biology. 13: 2982-92. PMID 8474456  1
1993 Jiang Y, Smale ST, Gralla JD. A common ATP requirement for open complex formation and transcription at promoters containing initiator or TATA elements. The Journal of Biological Chemistry. 268: 6535-40. PMID 8454623  1
1993 Hahm K, Kim G, Turck CW, Smale ST. Isolation of a murine gene encoding a nucleic acid-binding protein with homology to hnRNP K. Nucleic Acids Research. 21: 3894. PMID 8367306 DOI: 10.1093/nar/21.16.3894  1
1993 Zenzie-Gregory B, Sheridan P, Jones KA, Smale ST. HIV-1 core promoter lacks a simple initiator element but contains a bipartite activator at the transcription start site. The Journal of Biological Chemistry. 268: 15823-32. PMID 8340407  1
1993 Zenzie-Gregory B, Khachi A, Garraway IP, Smale ST. Mechanism of initiator-mediated transcription: evidence for a functional interaction between the TATA-binding protein and DNA in the absence of a specific recognition sequence. Molecular and Cellular Biology. 13: 3841-9. PMID 8321191 DOI: 10.1128/MCB.13.7.3841  1
1991 Lo K, Landau NR, Smale ST. LyF-1, a transcriptional regulator that interacts with a novel class of promoters for lymphocyte-specific genes. Molecular and Cellular Biology. 11: 5229-43. PMID 1922043 DOI: 10.1128/MCB.11.10.5229  1
1991 Sakaguchi M, Zenzie-Gregory B, Groopman JE, Smale ST, Kim SY. Alternative pathway for induction of human immunodeficiency virus gene expression: involvement of the general transcription machinery. Journal of Virology. 65: 5448-56. PMID 1895393 DOI: 10.1128/JVI.65.10.5448-5456.1991  1
1990 Smale ST, Schmidt MC, Berk AJ, Baltimore D. Transcriptional activation by Sp1 as directed through TATA or initiator: specific requirement for mammalian transcription factor IID. Proceedings of the National Academy of Sciences of the United States of America. 87: 4509-13. PMID 2141169  0.48
1989 Smale ST, Baltimore D. The "initiator" as a transcription control element. Cell. 57: 103-13. PMID 2467742 DOI: 10.1016/0092-8674(89)90176-1  1
1987 Baker JC, Smale ST, Tjian R, Ames BN. Inhibition of simian virus 40 DNA replication in vitro by poly(ADP-ribosyl)ated diadenosine tetraphosphate. The Journal of Biological Chemistry. 262: 14855-8. PMID 2822703  1
1986 Haltiner MM, Smale ST, Tjian R. Two distinct promoter elements in the human rRNA gene identified by linker scanning mutagenesis. Molecular and Cellular Biology. 6: 227-35. PMID 3785147  1
1986 Smale ST, Tjian R. T-antigen-DNA polymerase alpha complex implicated in simian virus 40 DNA replication. Molecular and Cellular Biology. 6: 4077-87. PMID 3025630  1
1986 Smale ST, Tjian R. Inhibition of simian virus 40 DNA replication by specific modification of T-antigen with oxidized ATP. The Journal of Biological Chemistry. 261: 14369-72. PMID 3021737  1
1985 Smale ST, Tjian R. Transcription of herpes simplex virus tk sequences under the control of wild-type and mutant human RNA polymerase I promoters. Molecular and Cellular Biology. 5: 352-62. PMID 2983190  1
1983 Learned RM, Smale ST, Haltiner MM, Tjian R. Regulation of human ribosomal RNA transcription. Proceedings of the National Academy of Sciences of the United States of America. 80: 3558-62. PMID 6304717  1
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