Lucy Shapiro - Publications

Affiliations: 
Developmental Biology Stanford School of Medicine, Palo Alto, CA, United States 
Area:
cell cycle progression and cell differentiation
Website:
http://med.stanford.edu/profiles/Lucille_Shapiro/

150 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhou X, Wang J, Herrmann J, Moerner WE, Shapiro L. Asymmetric division yields progeny cells with distinct modes of regulating cell cycle-dependent chromosome methylation. Proceedings of the National Academy of Sciences of the United States of America. PMID 31315982 DOI: 10.1073/pnas.1906119116  0.76
2019 Comerci CJ, Herrmann J, Yoon J, Jabbarpour F, Zhou X, Nomellini JF, Smit J, Shapiro L, Wakatsuki S, Moerner WE. Topologically-guided continuous protein crystallization controls bacterial surface layer self-assembly. Nature Communications. 10: 2731. PMID 31227690 DOI: 10.1038/s41467-019-10650-x  0.76
2018 Dahlberg PD, Sartor AM, Wang J, Saurabh S, Shapiro L, Moerner WE. Identification of PAmKate as a Red Photoactivatable Fluorescent Protein for Cryogenic Super-Resolution Imaging. Journal of the American Chemical Society. PMID 30222332 DOI: 10.1021/jacs.8b05960  0.76
2018 Bayas CA, Wang J, Lee MK, Schrader JM, Shapiro L, Moerner WE. Spatial organization and dynamics of RNase E and ribosomes in. Proceedings of the National Academy of Sciences of the United States of America. PMID 29610352 DOI: 10.1073/pnas.1721648115  0.76
2017 Saurabh S, Perez AM, Comerci CJ, Shapiro L, Moerner WE. Super-Resolution Microscopy and Single-Protein Tracking in Live Bacteria Using a Genetically Encoded, Photostable Fluoromodule. Current Protocols in Cell Biology. 75: 4.32.1-4.32.22. PMID 28627757 DOI: 10.1002/cpcb.21  0.76
2017 Perez AM, Mann TH, Lasker K, Ahrens DG, Eckart MR, Shapiro L. A Localized Complex of Two Protein Oligomers Controls the Orientation of Cell Polarity. Mbio. 8. PMID 28246363 DOI: 10.1128/mBio.02238-16  0.56
2016 Schrader JM, Li GW, Childers WS, Perez AM, Weissman JS, Shapiro L, McAdams HH. Dynamic translation regulation in Caulobacter cell cycle control. Proceedings of the National Academy of Sciences of the United States of America. PMID 27791168 DOI: 10.1073/pnas.1614795113  1
2016 Ricci DP, Melfi MD, Lasker K, Dill DL, McAdams HH, Shapiro L. Cell cycle progression in Caulobacter requires a nucleoid-associated protein with high AT sequence recognition. Proceedings of the National Academy of Sciences of the United States of America. PMID 27647925 DOI: 10.1073/pnas.1612579113  1
2016 Lasker K, Mann TH, Shapiro L. An intracellular compass spatially coordinates cell cycle modules in Caulobacter crescentus. Current Opinion in Microbiology. 33: 131-139. PMID 27517351 DOI: 10.1016/j.mib.2016.06.007  1
2016 Saurabh S, Perez AM, Comerci CJ, Shapiro L, Moerner WE. Super-resolution imaging of live bacteria cells using a genetically-directed, highly photostable fluoromodule. Journal of the American Chemical Society. PMID 27479076 DOI: 10.1021/jacs.6b05943  1
2016 Mann TH, Seth Childers W, Blair JA, Eckart MR, Shapiro L. A cell cycle kinase with tandem sensory PAS domains integrates cell fate cues. Nature Communications. 7: 11454. PMID 27117914 DOI: 10.1038/ncomms11454  1
2016 Cheon GS, Kim H, Shapiro LW. A link between ordered trees and green-red trees Journal of the Korean Mathematical Society. 53: 187-199. DOI: 10.4134/JKMS.2016.53.1.187  0.6
2015 Lasker K, Schrader JM, Men Y, Marshik T, Dill DL, McAdams HH, Shapiro L. CauloBrowser: A systems biology resource for Caulobacter crescentus. Nucleic Acids Research. PMID 26476443 DOI: 10.1093/nar/gkv1050  1
2015 Schrader JM, Shapiro L. Synchronization of caulobacter crescentus for investigation of the bacterial cell cycle. Journal of Visualized Experiments : Jove. PMID 25938623 DOI: 10.3791/52633  1
2015 Zhou B, Schrader JM, Kalogeraki VS, Abeliuk E, Dinh CB, Pham JQ, Cui ZZ, Dill DL, McAdams HH, Shapiro L. The global regulatory architecture of transcription during the Caulobacter cell cycle. Plos Genetics. 11: e1004831. PMID 25569173 DOI: 10.1371/journal.pgen.1004831  1
2015 Davenport DE, Shapiro LW, Pudwell LK, Woodson LC. The boundary of ordered trees Journal of Integer Sequences. 18.  0.6
2014 Childers WS, Shapiro L. A pseudokinase couples signaling pathways to enable asymmetric cell division in a bacterium. Microbial Cell (Graz, Austria). 2: 29-32. PMID 28357261 DOI: 10.15698/mic2015.01.184  1
2014 Childers WS, Xu Q, Mann TH, Mathews II, Blair JA, Deacon AM, Shapiro L. Cell fate regulation governed by a repurposed bacterial histidine kinase. Plos Biology. 12: e1001979. PMID 25349992 DOI: 10.1371/journal.pbio.1001979  1
2014 Mera PE, Kalogeraki VS, Shapiro L. Replication initiator DnaA binds at the Caulobacter centromere and enables chromosome segregation Proceedings of the National Academy of Sciences of the United States of America. 111: 16100-16105. PMID 25349407 DOI: 10.1073/pnas.1418989111  1
2014 Mera PE, Kalogeraki VS, Shapiro L. Replication initiator DnaA binds at the Caulobacter centromere and enables chromosome segregation Proceedings of the National Academy of Sciences of the United States of America. 111: 16100-16105. PMID 25349407 DOI: 10.1073/pnas.1418989111  0.4
2014 Bossard C, Dobay MP, Parrens M, Lamant L, Missiaglia E, Haioun C, Martin A, Fabiani B, Delarue R, Tournilhac O, Delorenzi M, Gaulard P, de Leval L. Immunohistochemistry as a valuable tool to assess CD30 expression in peripheral T-cell lymphomas: high correlation with mRNA levels. Blood. 124: 2983-6. PMID 25224410 DOI: 10.1182/blood-2014-07-584953  1
2014 Bossard C, Dobay MP, Parrens M, Lamant L, Missiaglia E, Haioun C, Martin A, Fabiani B, Delarue R, Tournilhac O, Delorenzi M, Gaulard P, de Leval L. Immunohistochemistry as a valuable tool to assess CD30 expression in peripheral T-cell lymphomas: high correlation with mRNA levels. Blood. 124: 2983-6. PMID 25224410 DOI: 10.1182/blood-2014-07-584953  1
2014 Schrader JM, Zhou B, Li GW, Lasker K, Childers WS, Williams B, Long T, Crosson S, McAdams HH, Weissman JS, Shapiro L. The coding and noncoding architecture of the Caulobacter crescentus genome. Plos Genetics. 10: e1004463. PMID 25078267 DOI: 10.1371/journal.pgen.1004463  1
2014 Williams B, Bhat N, Chien P, Shapiro L. ClpXP and ClpAP proteolytic activity on divisome substrates is differentially regulated following the Caulobacter asymmetric cell division. Molecular Microbiology. 93: 853-66. PMID 24989075 DOI: 10.1111/mmi.12698  1
2014 Ptacin JL, Gahlmann A, Bowman GR, Perez AM, von Diezmann AR, Eckart MR, Moerner WE, Shapiro L. Bacterial scaffold directs pole-specific centromere segregation. Proceedings of the National Academy of Sciences of the United States of America. 111: E2046-55. PMID 24778223 DOI: 10.1073/pnas.1405188111  1
2014 Ptacin JL, Gahlmann A, Bowman GR, Perez AM, von Diezmann AR, Eckart MR, Moerner WE, Shapiro L. Bacterial scaffold directs pole-specific centromere segregation. Proceedings of the National Academy of Sciences of the United States of America. 111: E2046-55. PMID 24778223 DOI: 10.1073/pnas.1405188111  1
2014 Gonzalez D, Kozdon JB, McAdams HH, Shapiro L, Collier J. The functions of DNA methylation by CcrM in Caulobacter crescentus: a global approach. Nucleic Acids Research. 42: 3720-35. PMID 24398711 DOI: 10.1093/nar/gkt1352  1
2014 Liu L, Kim H, Casta A, Kobayashi Y, Shapiro LS, Christiano AM. Hairless is a histone H3K9 demethylase. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 28: 1534-42. PMID 24334705 DOI: 10.1096/fj.13-237677  0.6
2014 Cheon GS, Jin ST, Shapiro LW. A combinatorial equivalence relation for formal power series Linear Algebra and Its Applications. DOI: 10.1016/j.laa.2015.03.015  0.6
2014 Cheon GS, Jin ST, Shapiro LW. A combinatorial equivalence relation for formal power series Linear Algebra and Its Applications. DOI: 10.1016/j.laa.2015.03.015  0.6
2013 Kozdon JB, Melfi MD, Luong K, Clark TA, Boitano M, Wang S, Zhou B, Gonzalez D, Collier J, Turner SW, Korlach J, Shapiro L, McAdams HH. Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle. Proceedings of the National Academy of Sciences of the United States of America. 110: E4658-67. PMID 24218615 DOI: 10.1073/pnas.1319315110  1
2013 Bowman GR, Perez AM, Ptacin JL, Ighodaro E, Folta-Stogniew E, Comolli LR, Shapiro L. Oligomerization and higher-order assembly contribute to sub-cellular localization of a bacterial scaffold. Molecular Microbiology. 90: 776-95. PMID 24102805 DOI: 10.1111/mmi.12398  1
2013 Blair JA, Xu Q, Childers WS, Mathews II, Kern JW, Eckart M, Deacon AM, Shapiro L. Branched signal wiring of an essential bacterial cell-cycle phosphotransfer protein. Structure (London, England : 1993). 21: 1590-601. PMID 23932593 DOI: 10.1016/j.str.2013.06.024  1
2013 Shapiro L, Losick R. Retrospective. Francois Jacob (1920-2013). Science (New York, N.Y.). 340: 939. PMID 23704565 DOI: 10.1126/science.1239975  1
2013 Gahlmann A, Ptacin JL, Grover G, Quirin S, von Diezmann AR, Lee MK, Backlund MP, Shapiro L, Piestun R, Moerner WE. Quantitative multicolor subdiffraction imaging of bacterial protein ultrastructures in three dimensions. Nano Letters. 13: 987-93. PMID 23414562 DOI: 10.1021/nl304071h  1
2013 Hong SH, Toro E, Mortensen KI, de la Rosa MA, Doniach S, Shapiro L, Spakowitz AJ, McAdams HH. Caulobacter chromosome in vivo configuration matches model predictions for a supercoiled polymer in a cell-like confinement. Proceedings of the National Academy of Sciences of the United States of America. 110: 1674-9. PMID 23319648 DOI: 10.1073/pnas.1220824110  1
2013 Ptacin JL, Shapiro L. Chromosome architecture is a key element of bacterial cellular organization. Cellular Microbiology. 15: 45-52. PMID 23078580 DOI: 10.1111/cmi.12049  1
2012 Shapiro L. Life in a three-dimensional grid. The Journal of Biological Chemistry. 287: 38289-94. PMID 23007401 DOI: 10.1074/jbc.X112.422337  1
2012 Hocking J, Priyadarshini R, Takacs CN, Costa T, Dye NA, Shapiro L, Vollmer W, Jacobs-Wagner C. Osmolality-dependent relocation of penicillin-binding protein PBP2 to the division site in Caulobacter crescentus. Journal of Bacteriology. 194: 3116-27. PMID 22505677 DOI: 10.1128/JB.00260-12  1
2012 Biteen JS, Goley ED, Shapiro L, Moerner WE. Three-dimensional super-resolution imaging of the midplane protein FtsZ in live Caulobacter crescentus cells using astigmatism. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 13: 1007-12. PMID 22262316 DOI: 10.1002/cphc.201100686  0.76
2012 Xu Q, Christen B, Chiu HJ, Jaroszewski L, Klock HE, Knuth MW, Miller MD, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Figurski DH, Shapiro L, Wilson IA. Structure of the pilus assembly protein TadZ from Eubacterium rectale: implications for polar localization. Molecular Microbiology. 83: 712-27. PMID 22211578 DOI: 10.1111/j.1365-2958.2011.07954.x  1
2011 Lew MD, Lee SF, Ptacin JL, Lee MK, Twieg RJ, Shapiro L, Moerner WE. Three-dimensional superresolution colocalization of intracellular protein superstructures and the cell surface in live Caulobacter crescentus. Proceedings of the National Academy of Sciences of the United States of America. 108: E1102-10. PMID 22031697 DOI: 10.1073/pnas.1114444108  1
2011 Umbarger MA, Toro E, Wright MA, Porreca GJ, Baù D, Hong SH, Fero MJ, Zhu LJ, Marti-Renom MA, McAdams HH, Shapiro L, Dekker J, Church GM. The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation. Molecular Cell. 44: 252-64. PMID 22017872 DOI: 10.1016/j.molcel.2011.09.010  1
2011 Schwartz MA, Shapiro L. An SMC ATPase mutant disrupts chromosome segregation in Caulobacter. Molecular Microbiology. 82: 1359-74. PMID 21923769 DOI: 10.1111/j.1365-2958.2011.07836.x  1
2011 Biteen JS, Shapiro L, Moerner WE. Exploring protein superstructures and dynamics in live bacterial cells using single-molecule and superresolution imaging. Methods in Molecular Biology (Clifton, N.J.). 783: 139-58. PMID 21909887 DOI: 10.1007/978-1-61779-282-3_8  0.76
2011 Christen B, Abeliuk E, Collier JM, Kalogeraki VS, Passarelli B, Coller JA, Fero MJ, McAdams HH, Shapiro L. The essential genome of a bacterium Molecular Systems Biology. 7. PMID 21878915 DOI: 10.1038/msb.2011.58  1
2011 Kirschner MW, Shapiro L, McAdams H, Almouzni G, Sharp PA, Young RA, Alon U. Fifty years after Jacob and Monod: what are the unanswered questions in molecular biology? Molecular Cell. 42: 403-4. PMID 21748867  1
2011 Dye NA, Pincus Z, Fisher IC, Shapiro L, Theriot JA. Mutations in the nucleotide binding pocket of MreB can alter cell curvature and polar morphology in Caulobacter. Molecular Microbiology. 81: 368-94. PMID 21564339 DOI: 10.1111/j.1365-2958.2011.07698.x  1
2011 Goley ED, Yeh YC, Hong SH, Fero MJ, Abeliuk E, Mcadams HH, Shapiro L. Assembly of the Caulobacter cell division machine Molecular Microbiology. 80: 1680-1698. PMID 21542856 DOI: 10.1111/j.1365-2958.2011.07677.x  1
2011 Britos L, Abeliuk E, Taverner T, Lipton M, McAdams H, Shapiro L. Regulatory response to carbon starvation in caulobacter crescentus Plos One. 6. PMID 21494595 DOI: 10.1371/journal.pone.0018179  1
2011 Lee SF, Thompson MA, Schwartz MA, Shapiro L, Moerner WE. Super-resolution imaging of the nucleoid-associated protein HU in Caulobacter crescentus. Biophysical Journal. 100: L31-3. PMID 21463569 DOI: 10.1016/j.bpj.2011.02.022  1
2011 McAdams HH, Shapiro L. The architecture and conservation pattern of whole-cell control circuitry Journal of Molecular Biology. 409: 28-35. PMID 21371478 DOI: 10.1016/j.jmb.2011.02.041  1
2011 Bowman GR, Lyuksyutova AI, Shapiro L. Bacterial polarity. Current Opinion in Cell Biology. 23: 71-7. PMID 21095111 DOI: 10.1016/j.ceb.2010.10.013  1
2011 Lew MD, Lee SF, Ptacin JL, Lee MK, Shapiro L, Moerner WE. Super-resolution 3D co-localization of protein superstructures and the cellular surface in live caulobacter crescentus Optics Infobase Conference Papers 1
2010 Tan HM, Kozdon JB, Shen X, Shapiro L, McAdams HH. An essential transcription factor, SciP, enhances robustness of Caulobacter cell cycle regulation Proceedings of the National Academy of Sciences of the United States of America. 107: 18985-18990. PMID 20956288 DOI: 10.1073/pnas.1014395107  1
2010 Ptacin JL, Shapiro L. Initiating bacterial mitosis: understanding the mechanism of ParA-mediated chromosome segregation. Cell Cycle (Georgetown, Tex.). 9: 4033-4. PMID 20948303 DOI: 10.4161/cc.9.20.13521  1
2010 Lee HL, Lord SJ, Iwanaga S, Zhan K, Xie H, Williams JC, Wang H, Bowman GR, Goley ED, Shapiro L, Twieg RJ, Rao J, Moerner WE. Superresolution imaging of targeted proteins in fixed and living cells using photoactivatable organic fluorophores. Journal of the American Chemical Society. 132: 15099-101. PMID 20936809 DOI: 10.1021/ja1044192  1
2010 Goley ED, Dye NA, Werner JN, Gitai Z, Shapiro L. Imaging-based identification of a critical regulator of FtsZ protofilament curvature in Caulobacter. Molecular Cell. 39: 975-87. PMID 20864042 DOI: 10.1016/j.molcel.2010.08.027  1
2010 Yeh YC, Comolli LR, Downing KH, Shapiro L, McAdams HH. The caulobacter Tol-Pal complex is essential for outer membrane integrity and the positioning of a polar localization factor. Journal of Bacteriology. 192: 4847-58. PMID 20693330 DOI: 10.1128/JB.00607-10  1
2010 Ptacin JL, Lee SF, Garner EC, Toro E, Eckart M, Comolli LR, Moerner WE, Shapiro L. A spindle-like apparatus guides bacterial chromosome segregation. Nature Cell Biology. 12: 791-8. PMID 20657594 DOI: 10.1038/ncb2083  1
2010 Landt SG, Lesley JA, Britos L, Shapiro L. CrfA, a small noncoding RNA regulator of adaptation to carbon starvation in Caulobacter crescentus. Journal of Bacteriology. 192: 4763-75. PMID 20601471 DOI: 10.1128/JB.00343-10  1
2010 Iniesta AA, Hillson NJ, Shapiro L. Polar remodeling and histidine kinase activation, which is essential for Caulobacter cell cycle progression, are dependent on DNA replication initiation. Journal of Bacteriology. 192: 3893-902. PMID 20525830 DOI: 10.1128/JB.00468-10  1
2010 Goley ED, Comolli LR, Fero KE, Downing KH, Shapiro L. DipM links peptidoglycan remodelling to outer membrane organization in Caulobacter. Molecular Microbiology. 77: 56-73. PMID 20497504 DOI: 10.1111/j.1365-2958.2010.07222.x  1
2010 Iniesta AA, Hillson NJ, Shapiro L. Cell pole-specific activation of a critical bacterial cell cycle kinase. Proceedings of the National Academy of Sciences of the United States of America. 107: 7012-7. PMID 20351295 DOI: 10.1073/pnas.1001767107  1
2010 Toro E, Shapiro L. Bacterial chromosome organization and segregation. Cold Spring Harbor Perspectives in Biology. 2: a000349. PMID 20182613 DOI: 10.1101/cshperspect.a000349  1
2010 Christen B, Fero MJ, Hillson NJ, Bowman G, Hong SH, Shapiro L, McAdams HH. High-throughput identification of protein localization dependency networks Proceedings of the National Academy of Sciences of the United States of America. 107: 4681-4686. PMID 20176934 DOI: 10.1073/pnas.1000846107  1
2010 Bowman GR, Comolli LR, Gaietta GM, Fero M, Hong SH, Jones Y, Lee JH, Downing KH, Ellisman MH, McAdams HH, Shapiro L. Caulobacter PopZ forms a polar subdomain dictating sequential changes in pole composition and function. Molecular Microbiology. 76: 173-89. PMID 20149103 DOI: 10.1111/j.1365-2958.2010.07088.x  1
2010 Yeh YC, Comolli LR, Downing KH, Shapiro L, McAdams HH. The Caulobacter Tol-Pal complex is essential for outer membrane integrity and the positioning of a polar localization factor Journal of Bacteriology. 192: 4847-4858. DOI: 10.1128/JB.00607-10  1
2009 Shapiro L, McAdams HH, Losick R. Why and how bacteria localize proteins Science. 326: 1225-1228. PMID 19965466 DOI: 10.1126/science.1175685  1
2009 McAdams HH, Shapiro L. System-level design of bacterial cell cycle control Febs Letters. 583: 3984-3991. PMID 19766635 DOI: 10.1016/j.febslet.2009.09.030  1
2009 Goley ED, Toro E, McAdams HH, Shapiro L. Dynamic chromosome organization and protein localization coordinate the regulatory circuitry that drives the bacterial cell cycle Cold Spring Harbor Symposia On Quantitative Biology. 74: 55-64. PMID 19687139 DOI: 10.1101/sqb.2009.74.005  1
2009 Collier J, Shapiro L. Feedback control of DnaA-mediated replication initiation by replisome-associated HdaA protein in Caulobacter. Journal of Bacteriology. 191: 5706-16. PMID 19633089 DOI: 10.1128/JB.00525-09  1
2009 Biteen JS, Thompson MA, Tselentis NK, Shapiro L, Moerner WE. Superresolution Imaging in Live Caulobacter Crescentus Cells Using Photoswitchable Enhanced Yellow Fluorescent Protein Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7185. DOI: 10.1117/12.809080  1
2008 Iniesta AA, Shapiro L. A bacterial control circuit integrates polar localization and proteolysis of key regulatory proteins with a phospho-signaling cascade. Proceedings of the National Academy of Sciences of the United States of America. 105: 16602-7. PMID 18946044 DOI: 10.1073/pnas.0808807105  1
2008 Toro E, Hong SH, McAdams HH, Shapiro L. Caulobacter requires a dedicated mechanism to initiate chromosome segregation Proceedings of the National Academy of Sciences of the United States of America. 105: 15435-15440. PMID 18824683 DOI: 10.1073/pnas.0807448105  1
2008 Bowman GR, Comolli LR, Zhu J, Eckart M, Koenig M, Downing KH, Moerner WE, Earnest T, Shapiro L. A polymeric protein anchors the chromosomal origin/ParB complex at a bacterial cell pole. Cell. 134: 945-55. PMID 18805088 DOI: 10.1016/j.cell.2008.07.015  1
2008 Biteen JS, Thompson MA, Tselentis NK, Bowman GR, Shapiro L, Moerner WE. Super-resolution imaging in live Caulobacter crescentus cells using photoswitchable EYFP. Nature Methods. 5: 947-9. PMID 18794860 DOI: 10.1038/nmeth.1258  0.76
2008 Lesley JA, Shapiro L. SpoT regulates DnaA stability and initiation of DNA replication in carbon-starved Caulobacter crescentus. Journal of Bacteriology. 190: 6867-80. PMID 18723629 DOI: 10.1128/JB.00700-08  1
2008 Shen X, Collier J, Dill D, Shapiro L, Horowitz M, McAdams HH. Architecture and inherent robustness of a bacterial cell-cycle control system Proceedings of the National Academy of Sciences of the United States of America. 105: 11340-11345. PMID 18685108 DOI: 10.1073/pnas.0805258105  1
2008 Landt SG, Abeliuk E, McGrath PT, Lesley JA, McAdams HH, Shapiro L. Small non-coding RNAs in Caulobacter crescentus Molecular Microbiology. 68: 600-614. PMID 18373523 DOI: 10.1111/j.1365-2958.2008.06172.x  1
2008 Thanbichler M, Shapiro L. Getting organized--how bacterial cells move proteins and DNA. Nature Reviews. Microbiology. 6: 28-40. PMID 18059290 DOI: 10.1038/nrmicro1795  1
2008 Biteen JS, Thompson MA, Tselentis NK, Shapiro L, Moerner WE. Superresolution imaging in live bacterial cells by single-molecule active-control microscopy 2008 Conference On Quantum Electronics and Laser Science Conference On Lasers and Electro-Optics, Cleo/Qels. DOI: 10.1109/CLEO.2008.4551058  1
2008 Ross PL, Chen X, Toro E, Britos L, Shapiro L, Pappin D. Chapter 18 Multiplexed Quantitative Proteomics Using Mass Spectrometry Comprehensive Analytical Chemistry. 52: 449-466. DOI: 10.1016/S0166-526X(08)00218-3  1
2007 Laub MT, Shapiro L, McAdams HH. Systems biology of caulobacter Annual Review of Genetics. 41: 429-441. PMID 18076330 DOI: 10.1146/annurev.genet.41.110306.130346  1
2007 Thanbichler M, Iniesta AA, Shapiro L. A comprehensive set of plasmids for vanillate- and xylose-inducible gene expression in Caulobacter crescentus. Nucleic Acids Research. 35: e137. PMID 17959646 DOI: 10.1093/nar/gkm818  1
2007 Collier J, McAdams HH, Shapiro L. A DNA methylation ratchet governs progression through a bacterial cell cycle Proceedings of the National Academy of Sciences of the United States of America. 104: 17111-17116. PMID 17942674 DOI: 10.1073/pnas.0708112104  1
2007 Goley ED, Iniesta AA, Shapiro L. Cell cycle regulation in Caulobacter: location, location, location. Journal of Cell Science. 120: 3501-7. PMID 17928306 DOI: 10.1242/jcs.005967  1
2007 Hillson NJ, Hu P, Andersen GL, Shapiro L. Caulobacter crescentus as a whole-cell uranium biosensor. Applied and Environmental Microbiology. 73: 7615-21. PMID 17905881 DOI: 10.1128/AEM.01566-07  1
2007 Collier J, Shapiro L. Spatial complexity and control of a bacterial cell cycle. Current Opinion in Biotechnology. 18: 333-40. PMID 17709236 DOI: 10.1016/j.copbio.2007.07.007  1
2007 Rock FL, Mao W, Yaremchuk A, Tukalo M, Crépin T, Zhou H, Zhang YK, Hernandez V, Akama T, Baker SJ, Plattner JJ, Shapiro L, Martinis SA, Benkovic SJ, Cusack S, et al. An antifungal agent inhibits an aminoacyl-tRNA synthetase by trapping tRNA in the editing site. Science (New York, N.Y.). 316: 1759-61. PMID 17588934 DOI: 10.1126/science.1142189  1
2007 Dye NA, Shapiro L. The push and pull of the bacterial cytoskeleton. Trends in Cell Biology. 17: 239-45. PMID 17434308 DOI: 10.1016/j.tcb.2007.03.005  1
2007 McGrath PT, Lee H, Zhang L, Iniesta AA, Hottes AK, Tan MH, Hillson NJ, Hu P, Shapiro L, McAdams HH. High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons. Nature Biotechnology. 25: 584-92. PMID 17401361 DOI: 10.1038/nbt1294  1
2006 Thanbichler M, Shapiro L. Chromosome organization and segregation in bacteria. Journal of Structural Biology. 156: 292-303. PMID 16860572 DOI: 10.1016/j.jsb.2006.05.007  1
2006 Thanbichler M, Shapiro L. MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter. Cell. 126: 147-62. PMID 16839883 DOI: 10.1016/j.cell.2006.05.038  1
2006 Kim SY, Gitai Z, Kinkhabwala A, Shapiro L, Moerner WE. Single molecules of the bacterial actin MreB undergo directed treadmilling motion in Caulobacter crescentus. Proceedings of the National Academy of Sciences of the United States of America. 103: 10929-34. PMID 16829583 DOI: 10.1073/pnas.0604503103  1
2006 Iniesta AA, McGrath PT, Reisenauer A, McAdams HH, Shapiro L. A phospho-signaling pathway controls the localization and activity of a protease complex critical for bacterial cell cycle progression. Proceedings of the National Academy of Sciences of the United States of America. 103: 10935-40. PMID 16829582 DOI: 10.1073/pnas.0604554103  1
2006 McGrath PT, Iniesta AA, Ryan KR, Shapiro L, McAdams HH. A dynamically localized protease complex and a polar specificity factor control a cell cycle master regulator. Cell. 124: 535-47. PMID 16469700 DOI: 10.1016/j.cell.2005.12.033  1
2006 Wang SC, West L, Shapiro L. The bifunctional FtsK protein mediates chromosome partitioning and cell division in Caulobacter. Journal of Bacteriology. 188: 1497-508. PMID 16452433 DOI: 10.1128/JB.188.4.1497-1508.2006  1
2006 Collier J, Murray SR, Shapiro L. DnaA couples DNA replication and the expression of two cell cycle master regulators. The Embo Journal. 25: 346-56. PMID 16395331 DOI: 10.1038/sj.emboj.7600927  1
2006 Chen JC, Hottes AK, McAdams HH, McGrath PT, Viollier PH, Shapiro L. Cytokinesis signals truncation of the PodJ polarity factor by a cell cycle-regulated protease. The Embo Journal. 25: 377-86. PMID 16395329 DOI: 10.1038/sj.emboj.7600935  1
2005 Dye NA, Pincus Z, Theriot JA, Shapiro L, Gitai Z. Two independent spiral structures control cell shape in Caulobacter. Proceedings of the National Academy of Sciences of the United States of America. 102: 18608-13. PMID 16344481 DOI: 10.1073/pnas.0507708102  1
2005 Hottes AK, Shapiro L, McAdams HH. DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus. Molecular Microbiology. 58: 1340-53. PMID 16313620 DOI: 10.1111/j.1365-2958.2005.04912.x  1
2005 Benkovic SJ, Baker SJ, Alley MR, Woo YH, Zhang YK, Akama T, Mao W, Baboval J, Rajagopalan PT, Wall M, Kahng LS, Tavassoli A, Shapiro L. Identification of borinic esters as inhibitors of bacterial cell growth and bacterial methyltransferases, CcrM and MenH. Journal of Medicinal Chemistry. 48: 7468-76. PMID 16279806 DOI: 10.1021/jm050676a  1
2005 Thanbichler M, Wang SC, Shapiro L. The bacterial nucleoid: a highly organized and dynamic structure. Journal of Cellular Biochemistry. 96: 506-21. PMID 15988757 DOI: 10.1002/jcb.20519  1
2005 Crosson S, McGrath PT, Stephens C, McAdams HH, Shapiro L. Conserved modular design of an oxygen sensory/signaling network with species-specific output. Proceedings of the National Academy of Sciences of the United States of America. 102: 8018-23. PMID 15911751 DOI: 10.1073/pnas.0503022102  1
2005 Gitai Z, Thanbichler M, Shapiro L. The choreographed dynamics of bacterial chromosomes. Trends in Microbiology. 13: 221-8. PMID 15866039 DOI: 10.1016/j.tim.2005.03.006  1
2005 Thanbichler M, Viollier PH, Shapiro L. The structure and function of the bacterial chromosome. Current Opinion in Genetics & Development. 15: 153-62. PMID 15797198 DOI: 10.1016/j.gde.2005.01.001  1
2005 Altman S, Bassler BL, Beckwith J, Belfort M, Berg HC, Bloom B, Brenchley JE, Campbell A, Collier RJ, Connell N, Cozzarelli NR, Craig NL, Darst S, Ebright RH, Elledge SJ, ... ... Shapiro L, et al. An open letter to Elias Zerhouni. Science (New York, N.Y.). 307: 1409-10. PMID 15746409 DOI: 10.1126/science.307.5714.1409c  0.44
2005 Gitai Z, Dye NA, Reisenauer A, Wachi M, Shapiro L. MreB actin-mediated segregation of a specific region of a bacterial chromosome. Cell. 120: 329-41. PMID 15707892 DOI: 10.1016/j.cell.2005.01.007  1
2005 Chen JC, Viollier PH, Shapiro L. A membrane metalloprotease participates in the sequential degradation of a Caulobacter polarity determinant. Molecular Microbiology. 55: 1085-103. PMID 15686556 DOI: 10.1111/j.1365-2958.2004.04443.x  1
2004 Viollier PH, Shapiro L. Spatial complexity of mechanisms controlling a bacterial cell cycle. Current Opinion in Microbiology. 7: 572-8. PMID 15556028 DOI: 10.1016/j.mib.2004.10.005  1
2004 Crosson S, McAdams H, Shapiro L. A genetic oscillator and the regulation of cell cycle progression in Caulobacter crescentus. Cell Cycle (Georgetown, Tex.). 3: 1252-4. PMID 15467452  1
2004 Wang SC, Shapiro L. The topoisomerase IV ParC subunit colocalizes with the Caulobacter replisome and is required for polar localization of replication origins. Proceedings of the National Academy of Sciences of the United States of America. 101: 9251-6. PMID 15178756 DOI: 10.1073/pnas.0402567101  1
2004 Viollier PH, Thanbichler M, McGrath PT, West L, Meewan M, McAdams HH, Shapiro L. Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial DNA replication. Proceedings of the National Academy of Sciences of the United States of America. 101: 9257-62. PMID 15178755 DOI: 10.1073/pnas.0402606101  1
2004 Gitai Z, Dye N, Shapiro L. An actin-like gene can determine cell polarity in bacteria. Proceedings of the National Academy of Sciences of the United States of America. 101: 8643-8. PMID 15159537 DOI: 10.1073/pnas.0402638101  1
2004 Ryan KR, Huntwork S, Shapiro L. Recruitment of a cytoplasmic response regulator to the cell pole is linked to its cell cycle-regulated proteolysis. Proceedings of the National Academy of Sciences of the United States of America. 101: 7415-20. PMID 15123835 DOI: 10.1073/pnas.0402153101  1
2004 Holtzendorff J, Hung D, Brende P, Reisenauer A, Viollier PH, McAdams HH, Shapiro L. Oscillating global regulators control the genetic circuit driving a bacterial cell cycle. Science (New York, N.Y.). 304: 983-7. PMID 15087506 DOI: 10.1126/science.1095191  1
2004 Chen SL, Lee W, Hottes AK, Shapiro L, McAdams HH. Codon usage between genomes is constrained by genome-wide mutational processes. Proceedings of the National Academy of Sciences of the United States of America. 101: 3480-5. PMID 14990797 DOI: 10.1073/pnas.0307827100  1
2003 McAdams HH, Shapiro L. A bacterial cell-cycle regulatory network operating in time and space. Science (New York, N.Y.). 301: 1874-7. PMID 14512618 DOI: 10.1126/science.1087694  1
2003 Chen SL, Shapiro L. Identification of long intergenic repeat sequences associated with DNA methylation sites in Caulobacter crescentus and other alpha-proteobacteria. Journal of Bacteriology. 185: 4997-5002. PMID 12897020 DOI: 10.1128/JB.185.16.4997-5002.2003  1
2003 Viollier PH, Shapiro L. A lytic transglycosylase homologue, PleA, is required for the assembly of pili and the flagellum at the Caulobacter crescentus cell pole. Molecular Microbiology. 49: 331-45. PMID 12828633 DOI: 10.1046/j.1365-2958.2003.03576.x  1
2003 Judd EM, Ryan KR, Moerner WE, Shapiro L, McAdams HH. Fluorescence bleaching reveals asymmetric compartment formation prior to cell division in Caulobacter. Proceedings of the National Academy of Sciences of the United States of America. 100: 8235-40. PMID 12824468 DOI: 10.1073/pnas.1433105100  1
2003 Gitai Z, Shapiro L. Bacterial cell division spirals into control. Proceedings of the National Academy of Sciences of the United States of America. 100: 7423-4. PMID 12810947 DOI: 10.1073/pnas.1332806100  1
2003 Jensen RB, Shapiro L. Cell-cycle-regulated expression and subcellular localization of the Caulobacter crescentus SMC chromosome structural protein. Journal of Bacteriology. 185: 3068-75. PMID 12730166  0.72
2003 Ryan KR, Shapiro L. Temporal and spatial regulation in prokaryotic cell cycle progression and development. Annual Review of Biochemistry. 72: 367-94. PMID 12651741 DOI: 10.1146/annurev.biochem.72.121801.161824  1
2003 Jacobs C, Ausmees N, Cordwell SJ, Shapiro L, Laub MT. Functions of the CckA histidine kinase in Caulobacter cell cycle control Molecular Microbiology. 47: 1279-1290. PMID 12603734 DOI: 10.1046/j.1365-2958.2003.03379.x  1
2002 Shapiro L, McAdams HH, Losick R. Generating and exploiting polarity in bacteria. Science (New York, N.Y.). 298: 1942-6. PMID 12471245 DOI: 10.1126/science.1072163  1
2002 Ryan KR, Judd EM, Shapiro L. The CtrA response regulator essential for Caulobacter crescentus cell-cycle progression requires a bipartite degradation signal for temporally controlled proteolysis. Journal of Molecular Biology. 324: 443-55. PMID 12445780 DOI: 10.1016/S0022-2836(02)01042-2  1
2002 Viollier PH, Sternheim N, Shapiro L. Identification of a localization factor for the polar positioning of bacterial structural and regulatory proteins. Proceedings of the National Academy of Sciences of the United States of America. 99: 13831-6. PMID 12370432 DOI: 10.1073/pnas.182411999  1
2002 Hung DY, Shapiro L. A signal transduction protein cues proteolytic events critical to Caulobacter cell cycle progression. Proceedings of the National Academy of Sciences of the United States of America. 99: 13160-5. PMID 12237413 DOI: 10.1073/pnas.202495099  1
2002 Reisenauer A, Shapiro L. DNA methylation affects the cell cycle transcription of the CtrA global regulator in Caulobacter. The Embo Journal. 21: 4969-77. PMID 12234936  0.36
2002 Viollier PH, Sternheim N, Shapiro L. A dynamically localized histidine kinase controls the asymmetric distribution of polar pili proteins. The Embo Journal. 21: 4420-8. PMID 12198144 DOI: 10.1093/emboj/cdf454  1
2002 Marczynski GT, Shapiro L. Control of chromosome replication in caulobacter crescentus. Annual Review of Microbiology. 56: 625-56. PMID 12142494 DOI: 10.1146/annurev.micro.56.012302.161103  1
2002 Jensen RB, Wang SC, Shapiro L. Dynamic localization of proteins and DNA during a bacterial cell cycle. Nature Reviews. Molecular Cell Biology. 3: 167-76. PMID 11994737 DOI: 10.1038/nrm758  1
2002 Laub MT, Chen SL, Shapiro L, McAdams HH. Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle Proceedings of the National Academy of Sciences of the United States of America. 99: 4632-4637. PMID 11930012 DOI: 10.1073/pnas.062065699  1
2001 Jensen RB, Wang SC, Shapiro L. A moving DNA replication factory in Caulobacter crescentus. The Embo Journal. 20: 4952-63. PMID 11532959 DOI: 10.1093/emboj/20.17.4952  1
2001 Barnett MJ, Hung DY, Reisenauer A, Shapiro L, Long SR. A homolog of the CtrA cell cycle regulator is present and essential in Sinorhizobium meliloti. Journal of Bacteriology. 183: 3204-10. PMID 11325950 DOI: 10.1128/JB.183.10.3204-3210.2001  1
2001 Nierman WC, Feldblyum TV, Laub MT, Paulsen IT, Nelson KE, Eisen JA, Heidelberg JF, Alley MR, Ohta N, Maddock JR, Potocka I, Nelson WC, Newton A, Stephens C, Phadke ND, ... ... Shapiro L, et al. Complete genome sequence of Caulobacter crescentus. Proceedings of the National Academy of Sciences of the United States of America. 98: 4136-41. PMID 11259647 DOI: 10.1073/pnas.061029298  1
2000 Laub MT, McAdams HH, Feldblyum T, Fraser CM, Shapiro L. Global analysis of the genetic network controlling a bacterial cell cycle Science. 290: 2144-2148. PMID 11118148 DOI: 10.1126/science.290.5499.2144  1
2000 Skerker JM, Shapiro L. Identification and cell cycle control of a novel pilus system in Caulobacter crescentus. The Embo Journal. 19: 3223-34. PMID 10880436 DOI: 10.1093/emboj/19.13.3223  1
1970 August JT, Eoyang L, De Fernandez MT, Hasegawa S, Kuo CH, Rensing U, Shapiro L. Phage-specific and host proteins in the replication of bacteriophage RNA. Federation Proceedings. 29: 1170-5. PMID 4315363  1
1969 August JT, Eoyang L, Franze de Fernandez MT, Hasegawa S, Kuo CH, Rensing U, Shapiro L. Replication of the RNA genome. Journal of Cellular Physiology. 74: Suppl 1:187+. PMID 5363333  1
1968 August JT, Banerjee AK, Eoyang L, Franze de Fernandez MT, Hori K, Kuo CH, Rensing U, Shapiro L. Synthesis of bacteriophage Q-beta RNA. Cold Spring Harbor Symposia On Quantitative Biology. 33: 73-81. PMID 5254583  1
1968 August JT, Shapiro L. Ribonucleic acid virus replication. Research Publications - Association For Research in Nervous and Mental Disease. 44: 71-86. PMID 4894473  1
1968 Shapiro L, Franze de Fernandez MT, August JT. Resolution of two factors required in the Q-beta-RNA polymerase reaction. Nature. 220: 478-80. PMID 4879600  1
1967 Bellamy AR, Shapiro L, August JT, Joklik WK. Studies on reovirus RNA. I. Characterization of reovirus genome RNA. Journal of Molecular Biology. 29: 1-17. PMID 6055334  1
1966 Shapiro L, August JT. Symposium on replication of viral nucleic acids. II. Ribonucleic acid virus replication. Bacteriological Reviews. 30: 279-87. PMID 5327758  1
1965 SHAPIRO L, AUGUST JT. REPLICATION OF RNA VIRUSES. II. THE RNA PRODUCT OF A REACTION CATALYZED BY A VIRAL RNA-DEPENDENT RNA POLYMERASE. Journal of Molecular Biology. 11: 272-84. PMID 14290345  1
1965 AUGUST JT, SHAPIRO L, EOYANG L. REPLICATION OF RNA VIRUSES I. CHARACTERIZATION OF A VIRAL RNA-DEPENDENT RNA POLYMERASE. Journal of Molecular Biology. 11: 257-71. PMID 14290344  1
1965 Shapiro L, August JT. Replication of RNA viruses. 3. Utilization of ribonucleotide analogs in the reaction catalyzed by a RNA virus RNA polymerase. Journal of Molecular Biology. 14: 214-20. PMID 5883914  1
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