Xueyun Zheng, Ph.D. - Publications

2011-2015 Chemistry University of California, Santa Barbara, Santa Barbara, CA, United States 
Mass Spectrometry, Biophysics

34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Burnum-Johnson KE, Zheng X, Dodds JN, Ash J, Fourches D, Nicora CD, Wendler JP, Metz TO, Waters KM, Jansson JK, Smith RD, Baker ES. Ion Mobility Spectrometry and the Omics: Distinguishing Isomers, Molecular Classes and Contaminant Ions in Complex Samples. Trends in Analytical Chemistry : Trac. 116: 292-299. PMID 31798197 DOI: 10.1016/j.trac.2019.04.022  1
2019 Zheng X, Zhang Y, Zhang X, Li C, Liu X, Lin Y, Liang S. Fhl1p protein, a positive transcription factor in Pichia pastoris, enhances the expression of recombinant proteins. Microbial Cell Factories. 18: 207. PMID 31783868 DOI: 10.1186/s12934-019-1256-0  1
2019 Zhang X, Wang D, Duan Y, Zheng X, Lin Y, Liang S. Production of lycopene by metabolically engineered . Bioscience, Biotechnology, and Biochemistry. 1-8. PMID 31752618 DOI: 10.1080/09168451.2019.1693250  1
2019 Zheng X, Smith FB, Aly NA, Cai J, Smith RD, Patterson AD, Baker ES. Evaluating the structural complexity of isomeric bile acids with ion mobility spectrometry. Analytical and Bioanalytical Chemistry. PMID 31098744 DOI: 10.1007/s00216-019-01869-0  1
2018 Zheng X, Dupuis KT, Aly NA, Zhou Y, Smith FB, Tang K, Smith RD, Baker ES. Utilizing ion mobility spectrometry and mass spectrometry for the analysis of polycyclic aromatic hydrocarbons, polychlorinated biphenyls, polybrominated diphenyl ethers and their metabolites. Analytica Chimica Acta. 1037: 265-273. PMID 30292301 DOI: 10.1016/j.aca.2018.02.054  1
2018 Kyle JE, Aly N, Zheng X, Burnum-Johnson KE, Smith RD, Baker ES. Evaluating lipid mediator structural complexity using ion mobility spectrometry combined with mass spectrometry. Bioanalysis. PMID 29494212 DOI: 10.4155/bio-2017-0245  1
2017 Zheng X, Aly NA, Zhou Y, Dupuis KT, Bilbao A, Paurus VL, Orton DJ, Wilson R, Payne SH, Smith RD, Baker ES. A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry. Chemical Science. 8: 7724-7736. PMID 29568436 DOI: 10.1039/c7sc03464d  1
2017 Zheng X, Smith RD, Baker ES. Recent advances in lipid separations and structural elucidation using mass spectrometry combined with ion mobility spectrometry, ion-molecule reactions and fragmentation approaches. Current Opinion in Chemical Biology. 42: 111-118. PMID 29223060 DOI: 10.1016/j.cbpa.2017.11.009  1
2017 Poad BLJ, Zheng X, Mitchell TW, Smith RD, Baker ES, Blanksby SJ. Online ozonolysis combined with ion mobility-mass spectrometry provides a new platform for lipid isomer analyses. Analytical Chemistry. PMID 29220163 DOI: 10.1021/acs.analchem.7b04091  1
2017 Orton DJ, Tfaily MM, Moore RJ, LaMarche BL, Zheng X, Fillmore TL, Chu RK, Weitz KK, Monroe ME, Kelly RT, Smith RD, Baker ES. A Customizable Flow Injection System for Automated, High Throughput and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements. Analytical Chemistry. PMID 29161511 DOI: 10.1021/acs.analchem.7b02986  1
2017 Li C, Lin Y, Zheng X, Yuan Q, Pang N, Liao X, Huang Y, Zhang X, Liang S. Recycling of a selectable marker with a self-excisable plasmid in Pichia pastoris. Scientific Reports. 7: 11113. PMID 28894268 DOI: 10.1038/s41598-017-11494-5  1
2017 Stow SM, Causon T, Zheng X, Kurulugama RT, Mairinger T, May JC, Rennie EE, Baker ES, Smith RD, McLean JA, Hann S, Fjeldsted JC. An Interlaboratory Evaluation of Drift Tube Ion Mobility - Mass Spectrometry Collision Cross Section Measurements. Analytical Chemistry. PMID 28763190 DOI: 10.1021/acs.analchem.7b01729  1
2017 Zheng X, Deng L, Baker ES, Ibrahim YM, Petyuk VA, Smith RD. Distinguishing d- and l-aspartic and isoaspartic acids in amyloid β peptides with ultrahigh resolution ion mobility spectrometry. Chemical Communications (Cambridge, England). PMID 28654112 DOI: 10.1039/c7cc03321d  1
2017 Ma J, Casey CP, Zheng X, Ibrahim YM, Wilkins CS, Renslow RS, Thomas DG, Payne SH, Monroe ME, Smith RD, Teeguarden JG, Baker ES, Metz TO. PIXiE: An Algorithm for Automated Ion Mobility Arrival Time Extraction and Collision Cross Section Calculation using Global Data Association. Bioinformatics (Oxford, England). PMID 28505286 DOI: 10.1093/bioinformatics/btx305  1
2017 Deng L, Garimella SVB, Hamid AM, Webb IK, Attah IK, Norheim RV, Prost SA, Zheng X, Sandoval JA, Baker ES, Ibrahim YM, Smith RD. CRIMP Accumulation and Compression of Billions of Ions for Ion Mobility-MS using Traveling Waves in Structures for Lossless Ion Manipulations. Analytical Chemistry. PMID 28497957 DOI: 10.1021/acs.analchem.7b00189  1
2017 Deng L, Webb IK, Garimella SV, Hamid AM, Zheng X, Norheim RV, Prost SA, Anderson GA, Sandoval JA, Baker ES, Ibrahim YM, Smith RD. Serpentine Ultra-long Path with Extended Routing (SUPER) High Resolution Traveling Wave Ion Mobility-MS using Structures for Lossless Ion Manipulations. Analytical Chemistry. PMID 28332832 DOI: 10.1021/acs.analchem.7b00185  1
2017 Zheng X, Wojcik R, Zhang X, Ibrahim YM, Burnum-Johnson KE, Orton DJ, Monroe ME, Moore RJ, Smith RD, Baker ES. Coupling Front-End Separations, Ion Mobility Spectrometry, and Mass Spectrometry for Enhanced Multidimensional Biological and Environmental Analyses. Annual Review of Analytical Chemistry (Palo Alto, Calif.). PMID 28301728 DOI: 10.1146/annurev-anchem-061516-045212  1
2017 Zheng X, Renslow RS, Makola MM, Webb IK, Deng L, Thomas DG, Govind N, Ibrahim YM, Kabanda MM, Dubery IA, Heyman HM, Smith RD, Madala NE, Baker ES. Structural Elucidation of cis/trans Dicaffeoylquinic Acid Photoisomerization Using Ion Mobility Spectrometry-Mass Spectrometry. The Journal of Physical Chemistry Letters. PMID 28267339 DOI: 10.1021/acs.jpclett.6b03015  1
2016 Zhang X, Romm M, Zheng X, Zink EM, Kim YM, Burnum-Johnson KE, Orton DJ, Apffel A, Ibrahim YM, Monroe ME, Moore RJ, Smith JN, Ma J, Renslow RS, Thomas DG, et al. SPE-IMS-MS: An automated platform for sub-sixty second surveillance of endogenous metabolites and xenobiotics in biofluids. Clinical Mass Spectrometry (Del Mar, Calif.). 2: 1-10. PMID 29276770 DOI: 10.1016/j.clinms.2016.11.002  1
2016 Deng L, Ibrahim YM, Baker ES, Aly NA, Hamid AM, Zhang X, Zheng X, Garimella SVB, Webb IK, Prost SA, Sandoval JA, Norheim RV, Anderson GA, Tolmachev AV, Smith RD. Ion Mobility Separations of Isomers based upon Long Path Length Structures for Lossless Ion Manipulations Combined with Mass Spectrometry. Chemistryselect. 1: 2396-2399. PMID 28936476 DOI: 10.1002/slct.201600460  1
2016 Kyle JE, Casey CP, Stratton KG, Zink EM, Kim YM, Zheng X, Monroe ME, Weitz KK, Bloodsworth KJ, Orton DJ, Ibrahim YM, Moore RJ, Lee CG, Pedersen C, Orwoll E, et al. Comparing Identified and Statistically Significant Lipids and Polar Metabolites in 15-Year Old Serum and Dried Blood Spot Samples for Longitudinal Studies. Rapid Communications in Mass Spectrometry : Rcm. PMID 27958645 DOI: 10.1002/rcm.7808  1
2016 Zheng X, Zhang X, Schocker NS, Renslow RS, Orton DJ, Khamsi J, Ashmus RA, Almeida IC, Tang K, Costello CE, Smith RD, Michael K, Baker ES. Enhancing glycan isomer separations with metal ions and positive and negative polarity ion mobility spectrometry-mass spectrometry analyses. Analytical and Bioanalytical Chemistry. PMID 27604268 DOI: 10.1007/s00216-016-9866-4  1
2016 Deng L, Ibrahim YM, Hamid AM, Garimella SV, Webb IK, Zheng X, Prost SA, Sandoval JA, Norheim RV, Anderson GA, Tolmachev AV, Baker ES, Smith RD. Ultra-High Resolution Ion Mobility Separations Utilizing Traveling Waves in a 13-m Serpentine Path Length Structures for Lossless Ion Manipulations Module. Analytical Chemistry. PMID 27531027 DOI: 10.1021/acs.analchem.6b01915  1
2016 Hamid AM, Garimella SV, Ibrahim YM, Deng L, Zheng X, Webb IK, Anderson GA, Prost SA, Norheim RV, Tolmachev AV, Baker ES, Smith RD. Achieving high resolution ion mobility separations using traveling waves in compact multi-turn Structures for Lossless Ion Manipulations. Analytical Chemistry. PMID 27479234 DOI: 10.1021/acs.analchem.6b01914  1
2016 Economou NJ, Giammona MJ, Do TD, Zheng X, Teplow DB, Buratto SK, Bowers MT. Amyloid β-protein assembly and Alzheimer's disease: Dodecamers of Aβ42, but not of Aβ40, seed fibril formation. Journal of the American Chemical Society. PMID 26839237 DOI: 10.1021/jacs.5b11913  1
2015 Zheng X, Wu C, Liu D, Li H, Bitan G, Shea JE, Bowers MT. Mechanism of C-Terminal Fragments of Amyloid β-Protein as Aβ Inhibitors: Do C-Terminal Interactions Play a Key Role in Their Inhibitory Activity? The Journal of Physical Chemistry. B. PMID 26439281 DOI: 10.1021/acs.jpcb.5b08177  1
2015 Roychaudhuri R, Zheng X, Lomakin A, Maiti P, Condron MM, Benedek GB, Bitan G, Bowers MT, Teplow DB. Role of species-specific primary structure differences in Aβ42 assembly and neurotoxicity. Acs Chemical Neuroscience. PMID 26421877 DOI: 10.1021/acschemneuro.5b00180  1
2015 Zheng X, Liu D, Roychaudhuri R, Teplow DB, Bowers MT. Amyloid β-Protein Assembly: Differential Effects of the Protective A2T Mutation and Recessive A2V Familial Alzheimer's Disease Mutation. Acs Chemical Neuroscience. PMID 26244608 DOI: 10.1021/acschemneuro.5b00171  1
2015 Liu D, Peng X, Wu B, Zheng X, Chuong TT, Li J, Sun S, Stucky GD. Uniform Concave Polystyrene-Carbon Core-Shell Nanospheres by a Swelling Induced Buckling Process. Journal of the American Chemical Society. 137: 9772-5. PMID 26222800 DOI: 10.1021/jacs.5b05027  1
2015 Do TD, Chamas A, Zheng X, Barnes A, Chang D, Veldstra T, Takhar H, Dressler N, Trapp B, Miller K, McMahon A, Meredith SC, Shea JE, Lazar Cantrell K, Bowers MT. Elucidation of the Aggregation Pathways of Helix-Turn-Helix Peptides: Stabilization at the Turn Region Is Critical for Fibril Formation. Biochemistry. PMID 26070092 DOI: 10.1021/acs.biochem.5b00414  1
2015 Zheng X, Liu D, Klärner FG, Schrader T, Bitan G, Bowers MT. Amyloid β-protein assembly: The effect of molecular tweezers CLR01 and CLR03. The Journal of Physical Chemistry. B. 119: 4831-41. PMID 25751170 DOI: 10.1021/acs.jpcb.5b00692  1
2014 Roychaudhuri R, Lomakin A, Bernstein S, Zheng X, Condron MM, Benedek GB, Bowers M, Teplow DB. Gly25-Ser26 amyloid β-protein structural isomorphs produce distinct Aβ42 conformational dynamics and assembly characteristics. Journal of Molecular Biology. 426: 2422-41. PMID 24735871 DOI: 10.1016/j.jmb.2014.04.004  1
2014 Lee S, Zheng X, Krishnamoorthy J, Savelieff MG, Park HM, Brender JR, Kim JH, Derrick JS, Kochi A, Lee HJ, Kim C, Ramamoorthy A, Bowers MT, Lim MH. Rational design of a structural framework with potential use to develop chemical reagents that target and modulate multiple facets of Alzheimer's disease. Journal of the American Chemical Society. 136: 299-310. PMID 24397771 DOI: 10.1021/ja409801p  1
2012 Zheng X, Gessel MM, Wisniewski ML, Viswanathan K, Wright DL, Bahr BA, Bowers MT. Z-Phe-Ala-diazomethylketone (PADK) disrupts and remodels early oligomer states of the Alzheimer disease Aβ42 protein. The Journal of Biological Chemistry. 287: 6084-8. PMID 22253440 DOI: 10.1074/jbc.C111.328575  1
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