Joan L. Slonczewski - Publications

1984- Biology Kenyon College, Gambier, OH, United States 

49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Blount ZD, Maddamsetti R, Grant NA, Ahmed ST, Jagdish T, Baxter JA, Sommerfeld BA, Tillman A, Moore J, Slonczewski JL, Barrick JE, Lenski RE. Genomic and phenotypic evolution of in a novel citrate-only resource environment. Elife. 9. PMID 32469311 DOI: 10.7554/Elife.55414  0.52
2020 Kunka KS, Griffith JM, Holdener C, Bischof KM, Li H, DasSarma P, DasSarma S, Slonczewski JL. Acid Experimental Evolution of the Haloarchaeon sp. NRC-1 Selects Mutations Affecting Arginine Transport and Catabolism. Frontiers in Microbiology. 11: 535. PMID 32390952 DOI: 10.3389/Fmicb.2020.00535  1
2019 Moore JP, Li H, Engmann ML, Bischof KM, Kunka KS, Harris ME, Tancredi AC, Ditmars FS, Basting PJ, George NS, Bhagwat AA, Slonczewski JL. Inverted Regulation of Multidrug Efflux Pumps, Acid Resistance and Porins in Benzoate-Evolved K-12. Applied and Environmental Microbiology. PMID 31175192 DOI: 10.1128/Aem.00966-19  1
2018 Griffith JM, Basting PJ, Bischof KM, Wrona EP, Kunka KS, Tancredi AC, Moore JP, Hyman MRL, Slonczewski JL. Experimental evolution of K-12 in the presence of PMF uncoupler CCCP selects for mutations affecting PMF-driven drug efflux pumps. Applied and Environmental Microbiology. PMID 30578262 DOI: 10.1128/Aem.02792-18  1
2018 Mrdjen I, Fennessy S, Schaal A, Dennis R, Slonczewski JL, Lee S, Lee J. Tile Drainage and Anthropogenic Land Use Contribute to Harmful Algal Blooms and Microbiota Shifts in Inland Water Bodies. Environmental Science & Technology. PMID 29952549 DOI: 10.1021/acs.est.8b03269  0.01
2018 Hamdallah I, Torok N, Bischof KM, Majdalani N, Chadalavada S, Mdluli N, Creamer KE, Clark M, Holdener C, Basting PJ, Gottesman S, Slonczewski JL. Experimental Evolution of K-12 at High pH and RpoS Induction. Applied and Environmental Microbiology. PMID 29802191 DOI: 10.1128/Aem.00520-18  1
2017 He A, Penix SR, Basting PJ, Griffith JM, Creamer KE, Camperchioli D, Clark MW, Gonzales AS, Chavez Erazo JS, George NS, Bhagwat AA, Slonczewski JL. Acid evolution deletes amino-acid decarboxylases and reregulates catabolism of Escherichia coli K-12. Applied and Environmental Microbiology. PMID 28389540 DOI: 10.1128/Aem.00442-17  1
2016 Creamer KE, Ditmars FS, Basting PJ, Kunka KS, Hamdallah IN, Bush SP, Scott Z, He A, Penix SR, Gonzales AS, Eder EK, Camperchioli D, Berndt A, Clark MW, Rouhier KA, ... Slonczewski JL, et al. Benzoate and Salicylate Tolerant Strains Lose Antibiotic Resistance during Laboratory Evolution of Escherichia coli K-12. Applied and Environmental Microbiology. PMID 27793830 DOI: 10.1128/Aem.02736-16  1
2015 Clark MW, Yie AM, Eder EK, Dennis RG, Basting PJ, Martinez KA, Jones BD, Slonczewski JL. Periplasmic Acid Stress Increases Cell Division Asymmetry (Polar Aging) of Escherichia coli. Plos One. 10: e0144650. PMID 26713733 DOI: 10.1371/journal.pone.0144650  1
2015 Harden MM, He A, Creamer K, Clark MW, Hamdallah I, Martinez KA, Kresslein RL, Bush SP, Slonczewski JL. Acid-adapted strains of Escherichia coli K-12 obtained by experimental evolution. Applied and Environmental Microbiology. 81: 1932-41. PMID 25556191 DOI: 10.1128/Aem.03494-14  1
2013 Riggins DP, Narvaez MJ, Martinez KA, Harden MM, Slonczewski JL. Escherichia coli K-12 Survives Anaerobic Exposure at pH 2 without RpoS, Gad, or Hydrogenases, but Shows Sensitivity to Autoclaved Broth Products Plos One. 8. PMID 23520457 DOI: 10.1371/journal.pone.0056796  1
2012 Martinez KA, Kitko RD, Mershon JP, Adcox HE, Malek KA, Berkmen MB, Slonczewski JL. Cytoplasmic pH response to acid stress in individual cells of Escherichia coli and Bacillus subtilis observed by fluorescence ratio imaging microscopy Applied and Environmental Microbiology. 78: 3706-3714. PMID 22427503 DOI: 10.1128/AEM.00354-12  1
2011 Deininger KN, Horikawa A, Kitko RD, Tatsumi R, Rosner JL, Wachi M, Slonczewski JL. A requirement of TolC and MDR efflux pumps for acid adaptation and GadAB induction in Escherichia coli. Plos One. 6: e18960. PMID 21541325 DOI: 10.1371/journal.pone.0018960  1
2010 Slonczewski JL. Concerns about recently identified widespread antisense transcription in Escherichia coli. Mbio. 1. PMID 20714444 DOI: 10.1128/Mbio.00106-10  0.01
2010 Noguchi K, Riggins DP, Eldahan KC, Kitko RD, Slonczewski JL. Hydrogenase-3 contributes to anaerobic acid resistance of Escherichia coli. Plos One. 5: e10132. PMID 20405029 DOI: 10.1371/journal.pone.0010132  1
2010 Kitko RD, Wilks JC, Garduque GM, Slonczewski JL. Osmolytes contribute to pH homeostasis of Escherichia coli. Plos One. 5: e10078. PMID 20386696 DOI: 10.1371/journal.pone.0010078  1
2010 Slonczewski JL, Coker JA, DasSarma S. Microbial growth with multiple stressors Microbe. 5: 110-116. DOI: 10.1128/Microbe.5.110.1  1
2009 Kitko RD, Cleeton RL, Armentrout EI, Lee GE, Noguchi K, Berkmen MB, Jones BD, Slonczewski JL. Cytoplasmic acidification and the benzoate transcriptome in Bacillus subtilis. Plos One. 4: e8255. PMID 20011599 DOI: 10.1371/journal.pone.0008255  1
2009 Slonczewski JL, Fujisawa M, Dopson M, Krulwich TA. Cytoplasmic pH measurement and homeostasis in bacteria and archaea. Advances in Microbial Physiology. 55: 1-79, 317. PMID 19573695 DOI: 10.1016/S0065-2911(09)05501-5  1
2009 Wilks JC, Kitko RD, Cleeton SH, Lee GE, Ugwu CS, Jones BD, BonDurant SS, Slonczewski JL. Acid and base stress and transcriptomic responses in Bacillus subtilis. Applied and Environmental Microbiology. 75: 981-90. PMID 19114526 DOI: 10.1128/AEM.01652-08  1
2008 Kannan G, Wilks JC, Fitzgerald DM, Jones BD, Bondurant SS, Slonczewski JL. Rapid acid treatment of Escherichia coli: transcriptomic response and recovery. Bmc Microbiology. 8: 37. PMID 18302792 DOI: 10.1186/1471-2180-8-37  1
2007 Wilks JC, Slonczewski JL. pH of the cytoplasm and periplasm of Escherichia coli: rapid measurement by green fluorescent protein fluorimetry. Journal of Bacteriology. 189: 5601-7. PMID 17545292 DOI: 10.1128/Jb.00615-07  1
2006 Hayes ET, Wilks JC, Sanfilippo P, Yohannes E, Tate DP, Jones BD, Radmacher MD, BonDurant SS, Slonczewski JL. Oxygen limitation modulates pH regulation of catabolism and hydrogenases, multidrug transporters, and envelope composition in Escherichia coli K-12. Bmc Microbiology. 6: 89. PMID 17026754 DOI: 10.1186/1471-2180-6-89  1
2006 Novak JP, Kim SY, Xu J, Modlich O, Volsky DJ, Honys D, Slonczewski JL, Bell DA, Blattner FR, Blumwald E, Boerma M, Cosio M, Gatalica Z, Hajduch M, Hidalgo J, et al. Generalization of DNA microarray dispersion properties: microarray equivalent of t-distribution. Biology Direct. 1: 27. PMID 16959036 DOI: 10.1186/1745-6150-1-27  1
2005 Yohannes E, Thurber AE, Wilks JC, Tate DP, Slonczewski JL. Polyamine stress at high pH in Escherichia coli K-12. Bmc Microbiology. 5: 59. PMID 16223443 DOI: 10.1186/1471-2180-5-59  1
2005 Maurer LM, Yohannes E, Bondurant SS, Radmacher M, Slonczewski JL. pH regulates genes for flagellar motility, catabolism, and oxidative stress in Escherichia coli K-12. Journal of Bacteriology. 187: 304-19. PMID 15601715 DOI: 10.1128/Jb.187.1.304-319.2005  1
2004 Slonczewski JL, Marusak R. A response to BIO 2010: Transforming undergraduate education for future research biologists, from the perspective of the biochemistry and molecular biology major program at Kenyon College. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. 32: 151-5. PMID 21706713 DOI: 10.1002/bmb.2004.494032030342  0.01
2004 Yohannes E, Barnhart DM, Slonczewski JL. pH-dependent catabolic protein expression during anaerobic growth of Escherichia coli K-12. Journal of Bacteriology. 186: 192-9. PMID 14679238 DOI: 10.1128/JB.186.1.192-199.2004  1
2002 Slonczewski JL, Kirkpatrick C. Proteomic analysis of pH-dependent stress responses in Escherichia coli and Helicobacter pylori using two-dimensional gel electrophoresis. Methods in Enzymology. 358: 228-42. PMID 12474390 DOI: 10.1016/S0076-6879(02)58092-7  1
2002 Stancik LM, Stancik DM, Schmidt B, Barnhart DM, Yoncheva YN, Slonczewski JL. pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. Journal of Bacteriology. 184: 4246-58. PMID 12107143 DOI: 10.1128/JB.184.15.4246-4258.2002  1
2001 Kirkpatrick C, Maurer LM, Oyelakin NE, Yoncheva YN, Maurer R, Slonczewski JL. Acetate and formate stress: opposite responses in the proteome of Escherichia coli. Journal of Bacteriology. 183: 6466-77. PMID 11591692 DOI: 10.1128/Jb.183.21.6466-6477.2001  1
2000 Slonczewski JL, McGee DJ, Phillips J, Kirkpatrick C, Mobley HL. pH-dependent protein profiles of Helicobacter pylori analyzed by two-dimensional gels. Helicobacter. 5: 240-7. PMID 11179990 DOI: 10.1046/J.1523-5378.2000.00037.X  1
2000 Slonczewski J. Tuberculosis bacteria join UN Nature. 405: 1001. PMID 10890424 DOI: 10.1038/35016664  0.01
1999 Slonczewski JL, Blankenhorn D. Acid and base regulation in the proteome of Escherichia coli. Novartis Foundation Symposium. 221: 75-83; discussions 8. PMID 10207914 DOI: 10.1002/9780470515631.Ch6  1
1999 Blankenhorn D, Phillips J, Slonczewski JL. Acid- and base-induced proteins during aerobic and anaerobic growth of Escherichia coli revealed by two-dimensional gel electrophoresis. Journal of Bacteriology. 181: 2209-16. PMID 10094700 DOI: 10.1128/Jb.181.7.2209-2216.1999  1
1997 Lambert LA, Abshire K, Blankenhorn D, Slonczewski JL. Proteins induced in Escherichia coli by benzoic acid. Journal of Bacteriology. 179: 7595-9. PMID 9393730 DOI: 10.1128/Jb.179.23.7595-7599.1997  1
1996 Hersh BM, Farooq FT, Barstad DN, Blankenhorn DL, Slonczewski JL. A glutamate-dependent acid resistance gene in Escherichia coli Journal of Bacteriology. 178: 3978-3981. PMID 8682809 DOI: 10.1128/Jb.178.13.3978-3981.1996  1
1995 Lin J, Lee IS, Frey J, Slonczewski JL, Foster JW. Comparative analysis of extreme acid survival in Salmonella typhimurium, Shigella flexneri, and Escherichia coli. Journal of Bacteriology. 177: 4097-104. PMID 7608084  1
1994 Small P, Blankenhorn D, Welty D, Zinser E, Slonczewski JL. Acid and base resistance in Escherichia coli and Shigella flexneri: role of rpoS and growth pH. Journal of Bacteriology. 176: 1729-37. PMID 8132468 DOI: 10.1128/Jb.176.6.1729-1737.1994  1
1994 Lee IS, Slonczewski JL, Foster JW. A low-pH-inducible, stationary-phase acid tolerance response in Salmonella typhimurium. Journal of Bacteriology. 176: 1422-6. PMID 8113183  1
1992 White S, Tuttle FE, Blankenhorn D, Dosch DC, Slonczewski JL. pH dependence and gene structure of inaA in Escherichia coli. Journal of Bacteriology. 174: 1537-43. PMID 1537798 DOI: 10.1128/Jb.174.5.1537-1543.1992  1
1992 Watson N, Dunyak DS, Rosey EL, Slonczewski JL, Olson ER. Identification of elements involved in transcriptional regulation of the Escherichia coli cad operon by external pH Journal of Bacteriology. 174: 530-540. PMID 1370290 DOI: 10.1128/JB.174.2.530-540.1992  1
1990 Bingham RJ, Hall KS, Slonczewski JL. Alkaline induction of a novel gene locus, alx, in Escherichia coli Journal of Bacteriology. 172: 2184-2186. PMID 2108134 DOI: 10.1128/Jb.172.4.2184-2186.1990  1
1988 Aliabadi Z, Park YK, Slonczewski JL, Foster JW. Novel regulatory loci controlling oxygen- and pH-regulated gene expression in Salmonella typhimurium. Journal of Bacteriology. 170: 842-51. PMID 3276666  1
1988 Zigmond SH, Slonczewski JL, Wilde MW, Carson M. Polymorphonuclear leukocyte locomotion is insensitive to lowered cytoplasmic calcium levels. Cell Motility and the Cytoskeleton. 9: 184-9. PMID 3129198 DOI: 10.1002/Cm.970090210  1
1987 Wilde MW, Slonczewski JL, Carson M, Zigmond SH. Glycogen phosphorylase: a noninvasive indicator of cytoplasmic calcium. Methods in Enzymology. 141: 18-25. PMID 3298962 DOI: 10.1016/0076-6879(87)41052-5  1
1985 Slonczewski JL, Wilde MW, Zigmond SH. Phosphorylase a activity as an indicator of neutrophil activation by chemotactic peptide. The Journal of Cell Biology. 101: 1191-7. PMID 2995402 DOI: 10.1083/Jcb.101.4.1191  1
1982 Slonczewski JL, Macnab RM, Alger JR, Castle AM. Effects of pH and repellent tactic stimuli on protein methylation levels in Escherichia coli. Journal of Bacteriology. 152: 384-99. PMID 6749812  1
1981 Slonczewski JL, Rosen BP, Alger JR, Macnab RM. pH homeostasis in Escherichia coli: measurement by 31P nuclear magnetic resonance of methylphosphonate and phosphate. Proceedings of the National Academy of Sciences of the United States of America. 78: 6271-5. PMID 7031646 DOI: 10.1073/Pnas.78.10.6271  1
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